XDA Class Reference

Class for output data to the XDAII format. More...

#include <XDA.h>

Inheritance diagram for XDA:

Public Member Functions
	XDA (const InputParameters &parameters)
	Class consturctor. More...
virtual void	meshChanged () override
	Executes when the mesh alterted and sets a flag used by oversampling. More...
virtual void	outputStep (const ExecFlagType &type) override
	A single call to this function should output all the necessary data for a single timestep. More...
virtual bool	hasOutput ()
	Returns true if any of the other has methods return true. More...
bool	hasOutput (const ExecFlagType &type)
	Tests that any output exist for the given output type. More...
bool	hasNodalVariableOutput ()
	Returns true if there exists nodal nonlinear variables for output. More...
const std::set< std::string > &	getNodalVariableOutput ()
	The list of nodal nonlinear variables names that are set for output. More...
bool	hasElementalVariableOutput ()
	Returns true if there exists elemental nonlinear variables for output. More...
const std::set< std::string > &	getElementalVariableOutput ()
	The list of elemental nonlinear variables names that are set for output. More...
bool	hasScalarOutput ()
	Returns true if there exists scalar variables for output. More...
const std::set< std::string > &	getScalarOutput ()
	The list of scalar variables names that are set for output. More...
bool	hasPostprocessorOutput ()
	Returns true if there exists postprocessors for output. More...
const std::set< std::string > &	getPostprocessorOutput ()
	The list of postprocessor names that are set for output. More...
bool	hasVectorPostprocessorOutput ()
	Returns true if there exists VectorPostprocessors for output. More...
const std::set< std::string > &	getVectorPostprocessorOutput ()
	The list of VectorPostprocessor names that are set for output. More...
const OutputOnWarehouse &	advancedExecuteOn () const
	Get the current advanced 'execute_on' selections for display. More...
void	setFileNumber (unsigned int num)
	Sets the file number manually. More...
unsigned int	getFileNumber ()
	Return the current file number for this outputter. More...
virtual Real	time () override
	Get the output time. More...
virtual Real	timeOld ()
	Get the old output time. More...
virtual Real	dt ()
	Get the current time step size. More...
virtual Real	dtOld ()
	Get old time step size. More...
virtual int	timeStep ()
	Get the current time step. More...
const unsigned int &	interval () const
	Get the output interval. More...
const MultiMooseEnum &	executeOn () const
	Get the current 'execute_on' selections for display. More...
bool	isAdvanced ()
	Returns true if this object is an AdvancedOutput object. More...
void	allowOutput (bool state)
	Method for controlling the allow output state. More...
const std::string &	type () const
	Get the type of this object. More...
const std::string &	name () const
	Get the name of the object. More...
const InputParameters &	parameters () const
	Get the parameters of the object. More...
template<typename T >
const T &	getParam (const std::string &name) const
	Retrieve a parameter for the object. More...
template<typename T >
T	getCheckedPointerParam (const std::string &name, const std::string &error_string="") const
	Verifies that the requested parameter exists and is not NULL and returns it to the caller. More...
bool	isParamValid (const std::string &name) const
	Test if the supplied parameter is valid. More...
MooseApp &	getMooseApp () const
	Get the MooseApp this object is associated with. More...
virtual bool	enabled () const
	Return the enabled status of the object. More...
template<typename... Args>
void	paramError (const std::string &param, Args... args)
	Emits an error prefixed with the file and line number of the given param (from the input file) along with the full parameter path+name followed by the given args as the message. More...
template<typename... Args>
void	paramWarning (const std::string &param, Args... args)
	Emits a warning prefixed with the file and line number of the given param (from the input file) along with the full parameter path+name followed by the given args as the message. More...
template<typename... Args>
void	paramInfo (const std::string &param, Args... args)
	Emits an informational message prefixed with the file and line number of the given param (from the input file) along with the full parameter path+name followed by the given args as the message. More...
template<typename... Args>
void	mooseError (Args &&... args) const
template<typename... Args>
void	mooseWarning (Args &&... args) const
template<typename... Args>
void	mooseDeprecated (Args &&... args) const
template<typename... Args>
void	mooseInfo (Args &&... args) const
virtual void	timestepSetup ()
	Gets called at the beginning of the timestep before this object is asked to do its job. More...
virtual void	jacobianSetup ()
	Gets called just before the Jacobian is computed and before this object is asked to do its job. More...
virtual void	residualSetup ()
	Gets called just before the residual is computed and before this object is asked to do its job. More...
virtual void	subdomainSetup ()
	Gets called when the subdomain changes (i.e. More...
const ExecFlagEnum &	getExecuteOnEnum () const
	Return the execute on MultiMooseEnum for this object. More...
virtual const std::vector< ExecFlagType > &	execFlags () const
	(DEPRECATED) Get the execution flag for the object TODO: ExecFlagType More...
ExecFlagType	execBitFlags () const
	(DEPRECATED) Build and return the execution flags as a bitfield TODO: ExecFlagType More...

Static Public Member Functions
static InputParameters	enableOutputTypes (const std::string &names=std::string())
	A method for enabling individual output type control. More...
static std::string	getOutputFileBase (const MooseApp &app, std::string suffix="_out")
	Returns the default output file base. More...
static MultiMooseEnum	getExecuteOptions (std::string default_type="")
	(DEPRECATED) Return the support output execution times More...
static ExecFlagEnum	getExecuteOptions ()
	(DEPRECATED) Returns the available options for the 'execute_on' input parameters TODO: ExecFlagType More...
static ExecFlagEnum	getDefaultExecFlagEnum ()
	Return an ExecFlagEnum object with the available execution flags for Output objects. More...
static void	addDeprecatedInputParameters (InputParameters &params)
	A static helper for injecting deprecated parameters. More...

Public Attributes
const ConsoleStream	_console
	An instance of helper class to write streams to the Console objects. More...

Protected Member Functions
virtual void	output (const ExecFlagType &type) override
	Overload the Output::output method, this is required for XDA output due to the method utlized for outputing single/global parameters. More...
virtual std::string	filename () override
	Returns the current filename, this method handles adding the timestep suffix. More...
virtual void	updateOversample ()
	Performs the update of the solution vector for the oversample/re-positioned mesh. More...
virtual void	initialSetup ()
	Initialization method. More...
virtual bool	shouldOutput (const ExecFlagType &type)
	Handles logic for determining if a step should be output. More...
virtual void	outputNodalVariables ()
	Performs output of nodal nonlinear variables The child class must define this method to output the nonlinear variables as desired. More...
virtual void	outputElementalVariables ()
	Performs output of elemental nonlinear variables The child class must define this method to output the nonlinear variables as desired. More...
virtual void	outputScalarVariables ()
	Performs output of scalar variables The child class must define this method to output the scalar variables as desired. More...
virtual void	outputPostprocessors ()
	Performs output of postprocessors The child class must define this method to output the postprocessors as desired. More...
virtual void	outputVectorPostprocessors ()
	Performs output of VectorPostprocessors The child class must define this method to output the VectorPostprocessors as desired. More...
virtual void	outputInput ()
	Performs the output of the input file By default this method does nothing and is not called, the individual Output objects are responsible for calling it. More...
virtual void	outputSystemInformation ()
bool	checkFilename ()
	Checks the filename for output Checks the output against the 'output_if_base_contians' list. More...
virtual bool	onInterval ()
	Returns true if the output interval is satisfied. More...
template<typename T >
T &	declareRestartableData (std::string data_name)
	Declare a piece of data as "restartable". More...
template<typename T >
T &	declareRestartableData (std::string data_name, const T &init_value)
	Declare a piece of data as "restartable" and initialize it. More...
template<typename T >
T &	declareRestartableDataWithContext (std::string data_name, void *context)
	Declare a piece of data as "restartable". More...
template<typename T >
T &	declareRestartableDataWithContext (std::string data_name, const T &init_value, void *context)
	Declare a piece of data as "restartable" and initialize it. More...
template<typename T >
T &	declareRecoverableData (std::string data_name)
	Declare a piece of data as "recoverable". More...
template<typename T >
T &	declareRecoverableData (std::string data_name, const T &init_value)
	Declare a piece of data as "restartable" and initialize it. More...
template<typename T >
T &	declareRestartableDataWithObjectName (std::string data_name, std::string object_name)
	Declare a piece of data as "restartable". More...
template<typename T >
T &	declareRestartableDataWithObjectNameWithContext (std::string data_name, std::string object_name, void *context)
	Declare a piece of data as "restartable". More...
PerfID	registerTimedSection (const std::string &section_name, const unsigned int level)
	Call to register a named section for timing. More...

Protected Attributes
const unsigned int	_refinements
	The number of oversampling refinements. More...
bool	_oversample
	Flag indicating that oversampling is enabled. More...
bool	_change_position
	Flag for re-positioning. More...
bool	_elemental_as_nodal
	Flags to control nodal output. More...
bool	_scalar_as_nodal
std::string	_file_base
	The base filename from the input paramaters. More...
unsigned int &	_file_num
	A file number counter, initialized to 0 (this must be controlled by the child class, see Exodus) More...
unsigned int	_padding
	Number of digits to pad the extensions. More...
std::vector< std::string >	_output_if_base_contains
	Storage for 'output_if_base_contains'. More...
Real	_norm
	Current norm returned from PETSc. More...
PetscInt	_nonlinear_iter
	Current non-linear iteration returned from PETSc. More...
PetscInt	_linear_iter
	Current linear iteration returned from PETSc. More...
FEProblemBase *	_problem_ptr
	Pointer the the FEProblemBase object for output object (use this) More...
bool	_transient
	Transient flag (true = transient) More...
bool	_use_displaced
	Flag for using displaced mesh. More...
EquationSystems *	_es_ptr
	Reference the the libMesh::EquationSystems object that contains the data. More...
MooseMesh *	_mesh_ptr
	A convenience pointer to the current mesh (reference or displaced depending on "use_displaced") More...
bool	_sequence
	Flag for forcing call to outputSetup() with every call to output() (restartable) More...
ExecFlagEnum	_execute_on
	The common Execution types; this is used as the default execution type for everything except system information and input. More...
Real &	_time
	The current time for output purposes. More...
Real &	_time_old
	The old time. More...
int &	_t_step
	The current time step. More...
Real &	_dt
	Time step delta. More...
Real &	_dt_old
	Old time step delta. More...
unsigned int	_num
	The number of outputs written. More...
const unsigned int	_interval
	The output time step interval. More...
std::set< Real >	_sync_times
	Sync times for this outputter. More...
Real	_start_time
	Start outputting time. More...
Real	_end_time
	End outputting time. More...
int	_start_step
	Start outputting at this time step. More...
int	_end_step
	End outputting at this time step. More...
Real	_t_tol
	Time checking tolerance. More...
bool	_sync_only
	Flag for only executing at sync times. More...
bool	_initialized
	True if init() has been called. More...
bool	_allow_output
	Flag for disabling output. More...
bool	_is_advanced
	Flag for advanced output testing. More...
OutputOnWarehouse	_advanced_execute_on
	Storage for the individual component execute flags. More...
PerfID	_output_step_timer
	Timers. More...
const InputParameters &	_pars
	Parameters of this object, references the InputParameters stored in the InputParametersWarehouse. More...
MooseApp &	_app
	The MooseApp this object is associated with. More...
const std::string &	_type
	The type of this object (the Class name) More...
const std::string &	_name
	The name of this object, reference to value stored in InputParameters. More...
const bool &	_enabled
	Reference to the "enable" InputParaemters, used by Controls for toggling on/off MooseObjects. More...
FEProblemBase &	_mci_feproblem
	Reference to FEProblemBase instance. More...
const ExecFlagEnum &	_execute_enum
	Execute settings for this oejct. More...
const std::vector< ExecFlagType >	_exec_flags
	(DEPRECATED) execution flag (when is the object executed/evaluated) TODO: ExecFlagType More...
const ExecFlagType &	_current_execute_flag
	Reference to FEProblemBase. More...
const InputParameters *	_pg_params
	Params. More...
PerfGraph &	_perf_graph
	The performance graph to add to. More...
std::string	_prefix
	A prefix to use for all sections. More...

Private Attributes
bool	_binary
	Flag for binary output. More...

Detailed Description

Class for output data to the XDAII format.

Definition at line 25 of file XDA.h.

Constructor & Destructor Documentation

XDA()

XDA::XDA

(

const InputParameters &

parameters

)

Class consturctor.

Definition at line 40 of file XDA.C.

  : OversampleOutput(parameters), _binary(getParam<bool>("_binary"))
{
}

Member Function Documentation

addDeprecatedInputParameters()

static void Output::addDeprecatedInputParameters ( InputParameters &  params )

staticinherited

A static helper for injecting deprecated parameters.

advancedExecuteOn()

const OutputOnWarehouse & AdvancedOutput::advancedExecuteOn ( ) const

virtualinherited

Get the current advanced 'execute_on' selections for display.

Reimplemented from Output.

Definition at line 763 of file AdvancedOutput.C.

{
  return _advanced_execute_on;
}

allowOutput()

void Output::allowOutput ( bool  state )

inlineinherited

Method for controlling the allow output state.

Parameters

state

The state to set the allow flag to

Definition at line 128 of file Output.h.

{ _allow_output = state; }

checkFilename()

bool FileOutput::checkFilename ( )

protectedinherited

Checks the filename for output Checks the output against the 'output_if_base_contians' list.

Returns

Returns true if the filename is valid for output

Definition at line 147 of file FileOutput.C.

Referenced by FileOutput::shouldOutput(), and AdvancedOutput::shouldOutput().

{
  // Return true if 'output_if_base_contains' is not utilized
  if (_output_if_base_contains.empty())
    return true;

  // Assumed output is false
  bool output = false;

  // Loop through each string in the list
  for (const auto & search_string : _output_if_base_contains)
  {
    // Search for the string in the file base, if found set the output to true and break the loop
    if (_file_base.find(search_string) != std::string::npos)
    {
      output = true;
      break;
    }
  }

  // Return the value
  return output;
}

declareRecoverableData() [1/2]

template<typename T >

T & Restartable::declareRecoverableData ( std::string  data_name )

protectedinherited

Declare a piece of data as "recoverable".

This means that in the event of a recovery this piece of data will be restored back to its previous value.

Note - this data will NOT be restored on Restart!

NOTE: This returns a reference! Make sure you store it in a reference!

Parameters

data_name

The name of the data (usually just use the same name as the member variable)

Definition at line 269 of file Restartable.h.

{
  std::string full_name = _restartable_system_name + "/" + _restartable_name + "/" + data_name;

  registerRecoverableDataOnApp(full_name);

  return declareRestartableDataWithContext<T>(data_name, nullptr);
}

declareRecoverableData() [2/2]

template<typename T >

T & Restartable::declareRecoverableData ( std::string  data_name, const T &  init_value  )

protectedinherited

Declare a piece of data as "restartable" and initialize it.

This means that in the event of a restart this piece of data will be restored back to its previous value.

Note - this data will NOT be restored on Restart!

NOTE: This returns a reference! Make sure you store it in a reference!

Parameters

data_name	The name of the data (usually just use the same name as the member variable)
init_value	The initial value of the data

Definition at line 280 of file Restartable.h.

{
  std::string full_name = _restartable_system_name + "/" + _restartable_name + "/" + data_name;

  registerRecoverableDataOnApp(full_name);

  return declareRestartableDataWithContext<T>(data_name, init_value, nullptr);
}

declareRestartableData() [1/2]

template<typename T >

T & Restartable::declareRestartableData ( std::string  data_name )

protectedinherited

Declare a piece of data as "restartable".

This means that in the event of a restart this piece of data will be restored back to its previous value.

NOTE: This returns a reference! Make sure you store it in a reference!

Parameters

data_name

The name of the data (usually just use the same name as the member variable)

Definition at line 202 of file Restartable.h.

{
  return declareRestartableDataWithContext<T>(data_name, nullptr);
}

declareRestartableData() [2/2]

template<typename T >

T & Restartable::declareRestartableData ( std::string  data_name, const T &  init_value  )

protectedinherited

Declare a piece of data as "restartable" and initialize it.

This means that in the event of a restart this piece of data will be restored back to its previous value.

NOTE: This returns a reference! Make sure you store it in a reference!

Parameters

data_name	The name of the data (usually just use the same name as the member variable)
init_value	The initial value of the data

Definition at line 209 of file Restartable.h.

{
  return declareRestartableDataWithContext<T>(data_name, init_value, nullptr);
}

declareRestartableDataWithContext() [1/2]

template<typename T >

T & Restartable::declareRestartableDataWithContext ( std::string  data_name, void *  context  )

protectedinherited

Declare a piece of data as "restartable".

This means that in the event of a restart this piece of data will be restored back to its previous value.

NOTE: This returns a reference! Make sure you store it in a reference!

Parameters

data_name	The name of the data (usually just use the same name as the member variable)
context	Context pointer that will be passed to the load and store functions

Definition at line 216 of file Restartable.h.

{
  std::string full_name = _restartable_system_name + "/" + _restartable_name + "/" + data_name;
  auto data_ptr = libmesh_make_unique<RestartableData<T>>(full_name, context);
  T & restartable_data_ref = data_ptr->get();

  registerRestartableDataOnApp(full_name, std::move(data_ptr), _restartable_tid);

  return restartable_data_ref;
}

declareRestartableDataWithContext() [2/2]

template<typename T >

T & Restartable::declareRestartableDataWithContext ( std::string  data_name, const T &  init_value, void *  context  )

protectedinherited

Declare a piece of data as "restartable" and initialize it.

This means that in the event of a restart this piece of data will be restored back to its previous value.

NOTE: This returns a reference! Make sure you store it in a reference!

Parameters

data_name	The name of the data (usually just use the same name as the member variable)
init_value	The initial value of the data
context	Context pointer that will be passed to the load and store functions

Definition at line 229 of file Restartable.h.

{
  std::string full_name = _restartable_system_name + "/" + _restartable_name + "/" + data_name;
  auto data_ptr = libmesh_make_unique<RestartableData<T>>(full_name, context);
  data_ptr->set() = init_value;

  T & restartable_data_ref = data_ptr->get();
  registerRestartableDataOnApp(full_name, std::move(data_ptr), _restartable_tid);

  return restartable_data_ref;
}

declareRestartableDataWithObjectName()

template<typename T >

T & Restartable::declareRestartableDataWithObjectName ( std::string  data_name, std::string  object_name  )

protectedinherited

Declare a piece of data as "restartable".

This means that in the event of a restart this piece of data will be restored back to its previous value.

NOTE: This returns a reference! Make sure you store it in a reference!

Parameters

data_name	The name of the data (usually just use the same name as the member variable)
object_name	A supplied name for the object that is declaring this data.

Definition at line 245 of file Restartable.h.

{
  return declareRestartableDataWithObjectNameWithContext<T>(data_name, object_name, nullptr);
}

declareRestartableDataWithObjectNameWithContext()

template<typename T >

T & Restartable::declareRestartableDataWithObjectNameWithContext ( std::string  data_name, std::string  object_name, void *  context  )

protectedinherited

Declare a piece of data as "restartable".

This means that in the event of a restart this piece of data will be restored back to its previous value.

NOTE: This returns a reference! Make sure you store it in a reference!

Parameters

data_name	The name of the data (usually just use the same name as the member variable)
object_name	A supplied name for the object that is declaring this data.
context	Context pointer that will be passed to the load and store functions

Definition at line 252 of file Restartable.h.

{
  std::string old_name = _restartable_name;

  _restartable_name = object_name;

  T & value = declareRestartableDataWithContext<T>(data_name, context);

  _restartable_name = old_name;

  return value;
}

dt()

Real Output::dt ( )

virtualinherited

Get the current time step size.

Definition at line 253 of file Output.C.

Referenced by Console::writeTimestepInformation().

{
  if (_transient)
    return _dt;
  else
    return 1;
}

dtOld()

Real Output::dtOld ( )

virtualinherited

Get old time step size.

Definition at line 262 of file Output.C.

{
  if (_transient)
    return _dt_old;
  else
    return 1;
}

enabled()

virtual bool MooseObject::enabled ( ) const

inlinevirtualinherited

Return the enabled status of the object.

Reimplemented in EigenKernel.

Definition at line 91 of file MooseObject.h.

Referenced by EigenKernel::enabled().

{ return _enabled; }

enableOutputTypes()

InputParameters AdvancedOutput::enableOutputTypes ( const std::string &  names = std::string() )

staticinherited

A method for enabling individual output type control.

Parameters

names

(optional) Space separated of output type names that are supported by this Output object, if this is omitted all outputs types will be supported. The list of available output types is given below.

Output objects vary widely in what type of outputs they support (e.g., elemental variables, or postprocessor data). This method provides the user a means for controlling the types of outputs that are supported for the object being created. This is a static method that MUST be used to append parameters inside the objects validParams function.

List of Output Types and Method Names The output system is designed around overloading virtual method calls to output the various output types, the following list gives the name of the output type and the associated virtual method that should be overloaded to perform the output in the object being created.

Type virtual Method Name

---

nodal outputNodalVariables() elemental outputElementalVariables() scalar outputScalarVariables() postprocessor outputPostprocessors() vector_postprocessor outputVectorPostprocessors() input outputInput() system_information outputSystemInformation()

See also

CSV Exodus

Definition at line 101 of file AdvancedOutput.C.

Referenced by validParams< Console >(), validParams< Exodus >(), validParams< Nemesis >(), and validParams< TableOutput >().

{
  // The parameters object that will be returned
  InputParameters params = emptyInputParameters();

  // Get the MultiEnum of output types
  MultiMooseEnum output_types = getOutputTypes();

  // Update the enum of output types to append
  if (names.empty())
    output_types = output_types.getRawNames();
  else
    output_types = names;

  // Add the parameters and return them
  addValidParams(params, output_types);
  return params;
}

execBitFlags()

ExecFlagType SetupInterface::execBitFlags ( ) const

inherited

(DEPRECATED) Build and return the execution flags as a bitfield TODO: ExecFlagType

Definition at line 85 of file SetupInterface.C.

{
  // TODO: ExecFlagType
  mooseDeprecated("The execBitFlags method is being removed because MOOSE was updated to use a "
                  "ExecFlagEnum for execute flags. This method maintains the behavior of the "
                  "original method but the use of this method should be removed from your "
                  "application. The ExecFlagEnum should be inspected directly via the "
                  "getExecuteOnEnum() method.");

  unsigned int exec_bit_field = EXEC_NONE;
  for (const auto & flag : _exec_flags)
    exec_bit_field |= flag.id();
  return ExecFlagType("deprecated", exec_bit_field);
}

execFlags()

const std::vector< ExecFlagType > & SetupInterface::execFlags ( ) const

virtualinherited

(DEPRECATED) Get the execution flag for the object TODO: ExecFlagType

Reimplemented in MultiAppTransfer.

Definition at line 73 of file SetupInterface.C.

{
  // TODO: ExecFlagType
  mooseDeprecated("The execFlags() method is being removed because MOOSE has been updated to use a "
                  "ExecFlagEnum for execute flags. The current flags should be retrieved from "
                  "the \"exeucte_on\" parameters of your object or by using the \"_execute_enum\" "
                  "reference to the parameter or the getExecuteOnEnum() method.");

  return _exec_flags;
}

executeOn()

const MultiMooseEnum & Output::executeOn ( ) const

inherited

Get the current 'execute_on' selections for display.

Definition at line 277 of file Output.C.

{
  return _execute_on;
}

filename()

std::string XDA::filename ( )

overrideprotectedvirtual

Returns the current filename, this method handles adding the timestep suffix.

Returns

A string containg the current filename to be written

Reimplemented from FileOutput.

Definition at line 70 of file XDA.C.

Referenced by output().

{
  // Append the padded time step to the file base
  std::ostringstream output;
  output << _file_base << "_" << std::setw(_padding) << std::setprecision(0) << std::setfill('0')
         << std::right << _file_num;

  if (_binary)
    output << ".xdr";
  else
    output << ".xda";
  return output.str();
}

getCheckedPointerParam()

template<typename T >

T MooseObject::getCheckedPointerParam ( const std::string &  name, const std::string &  error_string = ""  ) const

inlineinherited

Verifies that the requested parameter exists and is not NULL and returns it to the caller.

The template parameter must be a pointer or an error will be thrown.

Definition at line 72 of file MooseObject.h.

  {
    return parameters().getCheckedPointerParam<T>(name, error_string);
  }

getDefaultExecFlagEnum()

ExecFlagEnum Output::getDefaultExecFlagEnum ( )

staticinherited

Return an ExecFlagEnum object with the available execution flags for Output objects.

Definition at line 89 of file Output.C.

Referenced by validParams< CommonOutputAction >(), and validParams< Output >().

{
  ExecFlagEnum exec_enum = MooseUtils::getDefaultExecFlagEnum();
  exec_enum.addAvailableFlags(EXEC_FAILED);
  return exec_enum;
}

getElementalVariableOutput()

const std::set< std::string > & AdvancedOutput::getElementalVariableOutput ( )

inherited

The list of elemental nonlinear variables names that are set for output.

Returns

A vector of strings containing the names of the nonlinear variables for output

See also

hasElementalVariableOutput

Definition at line 721 of file AdvancedOutput.C.

Referenced by Nemesis::output(), and Exodus::outputElementalVariables().

{
  return _execute_data["elemental"].output;
}

getExecuteOnEnum()

const ExecFlagEnum & SetupInterface::getExecuteOnEnum ( ) const

inherited

Return the execute on MultiMooseEnum for this object.

Definition at line 67 of file SetupInterface.C.

Referenced by ExecuteMooseObjectWarehouse< Transfer >::addObjectMask(), EigenExecutionerBase::init(), AttribExecOns::initFrom(), and MultiAppTransfer::MultiAppTransfer().

{
  return _execute_enum;
}

getExecuteOptions() [1/2]

ExecFlagEnum SetupInterface::getExecuteOptions ( )

staticinherited

(DEPRECATED) Returns the available options for the 'execute_on' input parameters TODO: ExecFlagType

Returns

A MooseEnum with the available 'execute_on' options, the default is 'residual'

Definition at line 101 of file SetupInterface.C.

{
  // TODO: ExecFlagType
  ::mooseDeprecated("The 'getExecuteOptions' was replaced by the ExecFlagEnum class because MOOSE "
                    "was updated to use this for the execute flags and the new function provides "
                    "additional arguments for modification of the enum.");
  return MooseUtils::getDefaultExecFlagEnum();
}

getExecuteOptions() [2/2]

MultiMooseEnum Output::getExecuteOptions ( std::string  default_type = "" )

staticinherited

(DEPRECATED) Return the support output execution times

Parameters

default_type

The default MultiMooseEnum option

Definition at line 77 of file Output.C.

{
  // TODO: ExecFlagType
  ::mooseDeprecated("This version 'getExecuteOptions' was replaced by the "
                    "Output::getDefaultExecFlagEnum() static function.");
  ExecFlagEnum exec_enum = MooseUtils::getDefaultExecFlagEnum();
  exec_enum.addAvailableFlags(EXEC_FAILED);
  exec_enum = default_type;
  return exec_enum;
}

getFileNumber()

unsigned int FileOutput::getFileNumber ( )

inherited

Return the current file number for this outputter.

This method was implemented for the MultiApp system, particularly when reseting an application and a new output file is desired after the reset.

Definition at line 184 of file FileOutput.C.

Referenced by OutputWarehouse::getFileNumbers().

{
  return _file_num;
}

getMooseApp()

MooseApp& MooseObject::getMooseApp ( ) const

inlineinherited

Get the MooseApp this object is associated with.

Definition at line 86 of file MooseObject.h.

Referenced by RestartableDataIO::createBackup(), RestartableDataIO::deserializeRestartableData(), ConsoleUtils::outputMeshInformation(), Resurrector::restartRestartableData(), and RestartableDataIO::restoreBackup().

{ return _app; }

getNodalVariableOutput()

const std::set< std::string > & AdvancedOutput::getNodalVariableOutput ( )

inherited

The list of nodal nonlinear variables names that are set for output.

Returns

A vector of strings containing the names of the nodal nonlinear variables for output

Note: The list returned by this will contain the names of both elemental and nodal variable names if 'elemental_as_nodal = true' in the input file. The libMesh output system (EquationSystems::build_solution_vector) performs the correct action within the solution vector by setting the nodal values as the average of the values for each of the element that the node shares.

See also

hasNodalVariableOutput

Definition at line 709 of file AdvancedOutput.C.

Referenced by Nemesis::output(), and Exodus::outputNodalVariables().

{
  return _execute_data["nodal"].output;
}

getOutputFileBase()

std::string FileOutput::getOutputFileBase ( const MooseApp &  app, std::string  suffix = "_out"  )

staticinherited

Returns the default output file base.

Returns

The name of the input file with '_out' append to the end

This method is static to allow for outside objects to call it, namely CommonOutputAction::setRecoverFileBase().

See also

CommonOutputAction::setRecoverFileBase()

Definition at line 111 of file FileOutput.C.

Referenced by FileOutput::FileOutput(), and MooseApp::getCheckpointDirectories().

{
  // If the App has an outputfile, then use it (MultiApp scenario)
  if (!app.getOutputFileBase().empty())
    return app.getOutputFileBase();

  // If the output base is not set it must be determined from the input file
  /* This will only return a non-empty string if the setInputFileName() was called, which is
   * generally not the case. One exception is when CoupledExecutioner is used */
  std::string input_filename = app.getInputFileName();
  if (input_filename.empty())
    input_filename = app.getFileName();

  // Assert that the filename is not empty
  mooseAssert(!input_filename.empty(), "Input Filename is NULL");

  // Determine location of "." in extension, assert if it is not found
  size_t pos = input_filename.find_last_of('.');
  mooseAssert(pos != std::string::npos, "Unable to determine suffix of input file name");

  // Append the "_out" to the name and return it
  size_t start = 0;
  if (input_filename.find_last_of('/') != std::string::npos)
    start = input_filename.find_last_of('/') + 1;
  return input_filename.substr(start, pos - start) + suffix;
}

getParam()

template<typename T >

const T & MooseObject::getParam ( const std::string &  name ) const

inherited

Retrieve a parameter for the object.

Parameters

name	The name of the parameter

Returns

The value of the parameter

Definition at line 185 of file MooseObject.h.

Referenced by FEProblemBase::addMaterialHelper(), ConstraintWarehouse::addObject(), BicubicSplineFunction::BicubicSplineFunction(), Piecewise::buildFromXandY(), DerivativeParsedMaterial::DerivativeParsedMaterial(), EigenKernel::EigenKernel(), FEProblemBase::FEProblemBase(), FieldSplitPreconditioner::FieldSplitPreconditioner(), FiniteDifferencePreconditioner::FiniteDifferencePreconditioner(), SideSetsBetweenSubdomainsGenerator::generate(), ExtraNodesetGenerator::generate(), MeshExtruderGenerator::generate(), SideSetsAroundSubdomainGenerator::generate(), GenericConstantRankTwoTensor::GenericConstantRankTwoTensor(), TimeSequenceStepper::init(), AttribThread::initFrom(), BlockRestrictable::initializeBlockRestrictable(), BoundaryRestrictable::initializeBoundaryRestrictable(), Console::initialSetup(), AdvancedOutput::initialSetup(), SideSetsBetweenSubdomains::modify(), AddExtraNodeset::modify(), MeshExtruder::modify(), SideSetsAroundSubdomain::modify(), ParsedAddSideset::ParsedAddSideset(), ParsedAux::ParsedAux(), ParsedGenerateSideset::ParsedGenerateSideset(), ParsedMaterial::ParsedMaterial(), ParsedODEKernel::ParsedODEKernel(), ParsedSubdomainMeshGenerator::ParsedSubdomainMeshGenerator(), ParsedSubdomainMeshModifier::ParsedSubdomainMeshModifier(), PhysicsBasedPreconditioner::PhysicsBasedPreconditioner(), SingleMatrixPreconditioner::SingleMatrixPreconditioner(), TimePeriod::TimePeriod(), and VectorOfPostprocessors::VectorOfPostprocessors().

{
  return InputParameters::getParamHelper(name, _pars, static_cast<T *>(0));
}

getPostprocessorOutput()

const std::set< std::string > & AdvancedOutput::getPostprocessorOutput ( )

inherited

The list of postprocessor names that are set for output.

Returns

A vector of strings containing the names of the postprocessor variables for output

See also

hasPostprocessorOutput

Definition at line 745 of file AdvancedOutput.C.

Referenced by TableOutput::outputPostprocessors(), Nemesis::outputPostprocessors(), and Exodus::outputPostprocessors().

{
  return _execute_data["postprocessors"].output;
}

getScalarOutput()

const std::set< std::string > & AdvancedOutput::getScalarOutput ( )

inherited

The list of scalar variables names that are set for output.

Returns

A vector of strings containing the names of the scalar variables for output

See also

hasScalarVariableOutput

Definition at line 733 of file AdvancedOutput.C.

Referenced by TableOutput::outputScalarVariables(), Nemesis::outputScalarVariables(), and Exodus::outputScalarVariables().

{
  return _execute_data["scalars"].output;
}

getVectorPostprocessorOutput()

const std::set< std::string > & AdvancedOutput::getVectorPostprocessorOutput ( )

inherited

The list of VectorPostprocessor names that are set for output.

Returns

A vector of strings containing the names of the VectorPostprocessor variables for output

See also

hasVectorPostprocessorOutput

Definition at line 757 of file AdvancedOutput.C.

Referenced by TableOutput::outputVectorPostprocessors().

{
  return _execute_data["vector_postprocessors"].output;
}

hasElementalVariableOutput()

bool AdvancedOutput::hasElementalVariableOutput ( )

inherited

Returns true if there exists elemental nonlinear variables for output.

Returns

True if nonlinear variable output exists

See also

getElementalVariableOutput

Definition at line 715 of file AdvancedOutput.C.

Referenced by Exodus::initialSetup().

{
  return hasOutputHelper("elemental");
}

hasNodalVariableOutput()

bool AdvancedOutput::hasNodalVariableOutput ( )

inherited

Returns true if there exists nodal nonlinear variables for output.

Returns

True if nonlinear variable output exists

See also

getNodalVariableOutput

Definition at line 703 of file AdvancedOutput.C.

Referenced by Exodus::initialSetup(), and Exodus::outputElementalVariables().

{
  return hasOutputHelper("nodal");
}

hasOutput() [1/2]

bool AdvancedOutput::hasOutput ( )

virtualinherited

Returns true if any of the other has methods return true.

Definition at line 350 of file AdvancedOutput.C.

Referenced by Exodus::initialSetup(), Exodus::output(), and AdvancedOutput::shouldOutput().

{
  // Test that variables exist for output AND that output execution flags are valid
  for (const auto & it : _execute_data)
    if (!(it.second).output.empty() && _advanced_execute_on.contains(it.first) &&
        _advanced_execute_on[it.first].isValid())
      return true;

  // Test execution flags for non-variable output
  if (_advanced_execute_on.contains("system_information") &&
      _advanced_execute_on["system_information"].isValid())
    return true;
  if (_advanced_execute_on.contains("input") && _advanced_execute_on["input"].isValid())
    return true;

  return false;
}

hasOutput() [2/2]

bool AdvancedOutput::hasOutput ( const ExecFlagType &  type )

inherited

Tests that any output exist for the given output type.

See also

Exodus

Definition at line 338 of file AdvancedOutput.C.

{
  // If any of the component outputs are true, then there is some output to perform
  for (const auto & it : _advanced_execute_on)
    if (wantOutput(it.first, type))
      return true;

  // There is nothing to output
  return false;
}

hasPostprocessorOutput()

bool AdvancedOutput::hasPostprocessorOutput ( )

inherited

Returns true if there exists postprocessors for output.

Returns

True if postprocessor output exists

See also

getPostprocessorOutput

Definition at line 739 of file AdvancedOutput.C.

Referenced by Exodus::initialSetup().

{
  return hasOutputHelper("postprocessors");
}

hasScalarOutput()

bool AdvancedOutput::hasScalarOutput ( )

inherited

Returns true if there exists scalar variables for output.

Returns

True if scalar variable output exists

See also

getScalarVariableOutput

Definition at line 727 of file AdvancedOutput.C.

Referenced by Exodus::initialSetup().

{
  return hasOutputHelper("scalars");
}

hasVectorPostprocessorOutput()

bool AdvancedOutput::hasVectorPostprocessorOutput ( )

inherited

Returns true if there exists VectorPostprocessors for output.

Returns

True if VectorPostprocessor output exists

See also

getVectorPostprocessorOutput

Definition at line 751 of file AdvancedOutput.C.

{
  return hasOutputHelper("vector_postprocessors");
}

initialSetup()

void AdvancedOutput::initialSetup ( )

protectedvirtualinherited

Initialization method.

This populates the various data structures needed to control the output

Reimplemented from Output.

Reimplemented in CSV, Exodus, Nemesis, and Console.

Definition at line 133 of file AdvancedOutput.C.

Referenced by Console::initialSetup(), Nemesis::initialSetup(), Exodus::initialSetup(), and CSV::initialSetup().

{
  // Do not initialize more than once
  // This check is needed for YAK which calls Executioners from within Executioners
  if (_initialized)
    return;

  // Initialize the available output
  initAvailableLists();

  // Separate the hide/show list into components
  initShowHideLists(getParam<std::vector<VariableName>>("show"),
                    getParam<std::vector<VariableName>>("hide"));

  // If 'elemental_as_nodal = true' the elemental variable names must be appended to the
  // nodal variable names. Thus, when libMesh::EquationSystem::build_solution_vector is called
  // it will create the correct nodal variable from the elemental
  if (isParamValid("elemental_as_nodal") && _elemental_as_nodal)
  {
    OutputData & nodal = _execute_data["nodal"];
    OutputData & elemental = _execute_data["elemental"];
    nodal.show.insert(elemental.show.begin(), elemental.show.end());
    nodal.hide.insert(elemental.hide.begin(), elemental.hide.end());
    nodal.available.insert(elemental.available.begin(), elemental.available.end());
  }

  // Similarly as above, if 'scalar_as_nodal = true' append the elemental variable lists
  if (isParamValid("scalar_as_nodal") && _scalar_as_nodal)
  {
    OutputData & nodal = _execute_data["nodal"];
    OutputData & scalar = _execute_data["scalars"];
    nodal.show.insert(scalar.show.begin(), scalar.show.end());
    nodal.hide.insert(scalar.hide.begin(), scalar.hide.end());
    nodal.available.insert(scalar.available.begin(), scalar.available.end());
  }

  // Initialize the show/hide/output lists for each of the types of output
  for (auto & it : _execute_data)
    initOutputList(it.second);

  // Initialize the execution flags
  for (auto & it : _advanced_execute_on)
    initExecutionTypes(it.first, it.second);

  // Set the initialization flag
  _initialized = true;
}

interval()

const unsigned int& Output::interval ( ) const

inherited

Get the output interval.

isAdvanced()

bool Output::isAdvanced ( )

inherited

Returns true if this object is an AdvancedOutput object.

Definition at line 283 of file Output.C.

{
  return _is_advanced;
}

isParamValid()

bool MooseObject::isParamValid ( const std::string &  name ) const

inlineinherited

Test if the supplied parameter is valid.

Parameters

name	The name of the parameter to test

Definition at line 81 of file MooseObject.h.

Referenced by AdvancedOutput::AdvancedOutput(), BicubicSplineFunction::BicubicSplineFunction(), Piecewise::buildFromFile(), Piecewise::buildFromXandY(), DistributedGeneratedMesh::buildMesh(), GeneratedMesh::buildMesh(), LibmeshPartitioner::clone(), OversampleOutput::cloneMesh(), CSVReader::CSVReader(), MultiAppNearestNodeTransfer::execute(), Exodus::Exodus(), FEProblemBase::FEProblemBase(), FileOutput::FileOutput(), MultiApp::fillPositions(), FunctionDT::FunctionDT(), RenameBoundaryGenerator::generate(), ElementSubdomainIDGenerator::generate(), BreakBoundaryOnSubdomainGenerator::generate(), ExtraNodesetGenerator::generate(), LowerDBlockFromSidesetGenerator::generate(), MeshSideSetGenerator::generate(), RenameBlockGenerator::generate(), GeneratedMeshGenerator::generate(), ParsedSubdomainMeshGenerator::generate(), MeshExtruderGenerator::generate(), SubdomainBoundingBoxGenerator::generate(), PatternedMeshGenerator::generate(), MultiAppNearestNodeTransfer::getLocalEntities(), MeshGenerator::getMesh(), MultiAppNearestNodeTransfer::getNearestNode(), IterationAdaptiveDT::init(), EigenExecutionerBase::init(), MooseMesh::init(), AdvancedOutput::initExecutionTypes(), BlockRestrictable::initializeBlockRestrictable(), BoundaryRestrictable::initializeBoundaryRestrictable(), SolutionAux::initialSetup(), MooseParsedVectorFunction::initialSetup(), Console::initialSetup(), Receiver::initialSetup(), SolutionFunction::initialSetup(), MooseParsedGradFunction::initialSetup(), MooseParsedFunction::initialSetup(), AdvancedOutput::initialSetup(), AdvancedOutput::initPostprocessorOrVectorPostprocessorLists(), IterationAdaptiveDT::IterationAdaptiveDT(), LeastSquaresFit::LeastSquaresFit(), LibmeshPartitioner::LibmeshPartitioner(), BreakBoundaryOnSubdomain::modify(), MeshExtruder::modify(), MeshSideSet::modify(), LowerDBlockFromSideset::modify(), AssignElementSubdomainID::modify(), ParsedSubdomainMeshModifier::modify(), RenameBlock::modify(), SubdomainBoundingBox::modify(), MooseMesh::MooseMesh(), EigenExecutionerBase::normalizeSolution(), Output::Output(), PetscOutput::PetscOutput(), Piecewise::Piecewise(), SolutionUserObject::readExodusII(), RenameBlock::RenameBlock(), RenameBlockGenerator::RenameBlockGenerator(), RenameBoundaryGenerator::RenameBoundaryGenerator(), SolutionUserObject::SolutionUserObject(), and TimePeriod::TimePeriod().

{ return _pars.isParamValid(name); }

jacobianSetup()

void SetupInterface::jacobianSetup ( )

virtualinherited

Gets called just before the Jacobian is computed and before this object is asked to do its job.

Reimplemented in EqualValueEmbeddedConstraint.

Definition at line 52 of file SetupInterface.C.

{
}

meshChanged()

void OversampleOutput::meshChanged ( )

overridevirtualinherited

Executes when the mesh alterted and sets a flag used by oversampling.

Reimplemented from MeshChangedInterface.

Reimplemented in Exodus.

Definition at line 105 of file OversampleOutput.C.

Referenced by Exodus::meshChanged().

{
  _oversample_mesh_changed = true;
}

mooseDeprecated()

template<typename... Args>

void MooseObject::mooseDeprecated ( Args &&...  args ) const

inlineinherited

Definition at line 155 of file MooseObject.h.

Referenced by FEProblemBase::advanceMultiApps(), MultiApp::advanceStep(), MultiApp::appProblem(), MooseMesh::buildSideList(), ChangeOverTimestepPostprocessor::ChangeOverTimestepPostprocessor(), FEProblemBase::computeResidual(), Material::declarePropertyOld(), Material::declarePropertyOlder(), MooseMesh::elem(), MultiAppTransfer::execFlags(), UserForcingFunction::f(), FaceFaceConstraint::FaceFaceConstraint(), FunctionDT::FunctionDT(), RandomICBase::generateRandom(), Control::getExecuteOptions(), Output::getExecuteOptions(), FEProblemBase::getNonlinearSystem(), FEProblemBase::getUserObjects(), FEProblemBase::getVectorPostprocessorValue(), FEProblemBase::getVectorPostprocessorValueOld(), NodalScalarKernel::NodalScalarKernel(), MooseMesh::node(), PercentChangePostprocessor::PercentChangePostprocessor(), MooseMesh::setBoundaryToNormalMap(), and UserForcingFunction::UserForcingFunction().

  {
    moose::internal::mooseDeprecatedStream(_console, false, std::forward<Args>(args)...);
  }

mooseError()

template<typename... Args>

void MooseObject::mooseError ( Args &&...  args ) const

inlineinherited

Definition at line 140 of file MooseObject.h.

Referenced by PetscExternalPartitioner::_do_partition(), GridPartitioner::_do_partition(), FEProblemBase::addConstraint(), FEProblemBase::addInitialCondition(), FEProblem::addLineSearch(), FEProblemBase::addLineSearch(), FEProblemBase::addOutput(), DiracKernel::addPointWithValidId(), FEProblemBase::addPostprocessor(), MooseMesh::addQuadratureNode(), FEProblemBase::addVectorPostprocessor(), Output::advancedExecuteOn(), AllSideSetsByNormalsGenerator::AllSideSetsByNormalsGenerator(), AnnularMesh::AnnularMesh(), AnnularMeshGenerator::AnnularMeshGenerator(), MultiApp::appPostprocessorValue(), MultiApp::appProblem(), MultiApp::appProblemBase(), MultiApp::appUserObjectBase(), DerivativeParsedMaterialHelper::assembleDerivatives(), Function::average(), Axisymmetric2D3DSolutionFunction::Axisymmetric2D3DSolutionFunction(), BicubicSplineFunction::BicubicSplineFunction(), BoundingValueElementDamper::BoundingValueElementDamper(), BoundingValueNodalDamper::BoundingValueNodalDamper(), BoundsAux::BoundsAux(), BreakMeshByBlockGenerator::BreakMeshByBlockGenerator(), BreakMeshByBlockGeneratorBase::BreakMeshByBlockGeneratorBase(), MooseMesh::buildCoarseningMap(), Piecewise::buildFromFile(), Piecewise::buildFromXandY(), Piecewise::buildFromXY(), TiledMesh::buildMesh(), FileMesh::buildMesh(), SpiralAnnularMesh::buildMesh(), DistributedGeneratedMesh::buildMesh(), GeneratedMesh::buildMesh(), ImageMeshGenerator::buildMesh3D(), ImageMesh::buildMesh3D(), MooseMesh::buildRefinementMap(), MooseMesh::buildSideList(), ChangeOverTimePostprocessor::ChangeOverTimePostprocessor(), EigenExecutionerBase::chebyshev(), SubProblem::checkBlockMatProps(), SubProblem::checkBoundaryMatProps(), FEProblemBase::checkCoordinateSystems(), FEProblemBase::checkDependMaterialsHelper(), FEProblemBase::checkDisplacementOrders(), Material::checkExecutionStage(), BreakMeshByBlockBase::checkInputParameter(), Steady::checkIntegrity(), EigenExecutionerBase::checkIntegrity(), ActuallyExplicitEuler::checkLinearConvergence(), FEProblemBase::checkProblemIntegrity(), Material::checkStatefulSanity(), FEProblemBase::checkUserObjects(), LibmeshPartitioner::clone(), MooseMesh::clone(), ComparisonPostprocessor::comparisonIsTrue(), CompositeFunction::CompositeFunction(), ElementLpNormAux::compute(), ElementH1ErrorFunctionAux::compute(), NodalPatchRecovery::compute(), InterfaceKernel::computeElemNeighJacobian(), TimeSequenceStepperBase::computeFailedDT(), IterationAdaptiveDT::computeFailedDT(), TimeStepper::computeFailedDT(), HistogramVectorPostprocessor::computeHistogram(), EqualValueEmbeddedConstraint::computeQpJacobian(), EqualValueEmbeddedConstraint::computeQpOffDiagJacobian(), FEProblemBase::computeResidualInternal(), FEProblemBase::computeResidualTag(), FEProblemBase::computeResidualType(), StatisticsVectorPostprocessor::computeStatValue(), Material::computeSubdomainProperties(), BDF2::computeTimeDerivatives(), ExplicitEuler::computeTimeDerivatives(), ImplicitEuler::computeTimeDerivatives(), NewmarkBeta::computeTimeDerivatives(), CrankNicolson::computeTimeDerivatives(), ActuallyExplicitEuler::computeTimeDerivatives(), LStableDirk2::computeTimeDerivatives(), LStableDirk3::computeTimeDerivatives(), ImplicitMidpoint::computeTimeDerivatives(), ExplicitTVDRK2::computeTimeDerivatives(), AStableDirk4::computeTimeDerivatives(), LStableDirk4::computeTimeDerivatives(), ExplicitRK2::computeTimeDerivatives(), PenetrationAux::computeValue(), ConcentricCircleMesh::ConcentricCircleMesh(), ConcentricCircleMeshGenerator::ConcentricCircleMeshGenerator(), TimeStepper::constrainStep(), AuxKernel::coupledDot(), AuxKernel::coupledDotDu(), CoupledForce::CoupledForce(), DebugResidualAux::DebugResidualAux(), BicubicSplineFunction::derivative(), DerivativeSumMaterial::DerivativeSumMaterial(), DGKernel::DGKernel(), FEProblemBase::duplicateVariableCheck(), EigenProblem::EigenProblem(), Eigenvalues::Eigenvalues(), ElementalVariableValue::ElementalVariableValue(), ElementQualityAux::ElementQualityAux(), MooseMesh::errorIfDistributedMesh(), SolutionUserObject::evalMeshFunction(), SolutionUserObject::evalMeshFunctionGradient(), SolutionUserObject::evalMultiValuedMeshFunction(), SolutionUserObject::evalMultiValuedMeshFunctionGradient(), PerflogDumper::execute(), MultiAppPostprocessorTransfer::execute(), DiscreteElementUserObject::execute(), MultiAppPostprocessorInterpolationTransfer::execute(), MultiAppVariableValueSamplePostprocessorTransfer::execute(), ElementQualityChecker::execute(), NodalValueSampler::execute(), MultiAppNearestNodeTransfer::execute(), PointValue::execute(), MultiAppPostprocessorToAuxScalarTransfer::execute(), MultiAppScalarToAuxScalarTransfer::execute(), MultiAppVariableValueSampleTransfer::execute(), MultiAppInterpolationTransfer::execute(), MultiAppUserObjectTransfer::execute(), FindValueOnLine::execute(), TimeExtremeValue::execute(), VectorPostprocessorComparison::execute(), LeastSquaresFit::execute(), LeastSquaresFitHistory::execute(), FEProblemBase::executeControls(), MultiAppVectorPostprocessorTransfer::executeFromMultiapp(), MultiAppVectorPostprocessorTransfer::executeToMultiapp(), Exodus::Exodus(), FileOutput::FileOutput(), CentroidMultiApp::fillPositions(), MultiApp::fillPositions(), VerifyElementUniqueID::finalize(), VerifyNodalUniqueID::finalize(), DiscreteElementUserObject::finalize(), ElementQualityChecker::finalize(), MemoryUsage::finalize(), PointSamplerBase::finalize(), Transfer::find_sys(), BreakMeshByBlockBase::findFreeBoundaryId(), BreakMeshByBlockGeneratorBase::findFreeBoundaryId(), FunctionDT::FunctionDT(), FunctionMaterialBase::FunctionMaterialBase(), ParsedMaterialHelper::functionParse(), FunctionScalarAux::FunctionScalarAux(), FunctionScalarIC::FunctionScalarIC(), GapValueAux::GapValueAux(), ExtraNodesetGenerator::generate(), ElementSubdomainIDGenerator::generate(), RenameBlockGenerator::generate(), RenameBoundaryGenerator::generate(), StitchedMeshGenerator::generate(), GeneratedMeshGenerator::generate(), MeshExtruderGenerator::generate(), SpiralAnnularMeshGenerator::generate(), SideSetsFromBoundingBoxGenerator::generate(), BoundingBoxNodeSetGenerator::generate(), PatternedMeshGenerator::generate(), GeneratedMesh::GeneratedMesh(), GeneratedMeshGenerator::GeneratedMeshGenerator(), RandomICBase::generateRandom(), GenericConstantMaterial::GenericConstantMaterial(), GenericFunctionMaterial::GenericFunctionMaterial(), MooseMesh::getBoundaryID(), MultiApp::getBoundingBox(), MooseMesh::getCoarseningMap(), Control::getControllableParameterByName(), FEProblemBase::getCoordSystem(), PiecewiseConstant::getDirection(), FEProblemBase::getDistribution(), ElementGenerator::getElemType(), MultiApp::getExecutioner(), FEProblemBase::getFunction(), SolutionUserObject::getLocalVarIndex(), AuxKernel::getMaterialProperty(), AuxKernel::getMaterialPropertyOld(), AuxKernel::getMaterialPropertyOlder(), SubProblem::getMatrixTagID(), AnnularMesh::getMaxInDimension(), DistributedGeneratedMesh::getMaxInDimension(), GeneratedMesh::getMaxInDimension(), FEProblemBase::getMaxQps(), FEProblemBase::getMaxShapeFunctions(), AnnularMesh::getMinInDimension(), DistributedGeneratedMesh::getMinInDimension(), GeneratedMesh::getMinInDimension(), MooseMesh::getMortarInterface(), MooseMesh::getMortarInterfaceByName(), MooseMesh::getNodeBlockIds(), MooseMesh::getNodeList(), FEProblemBase::getNonlinearSystem(), MooseMesh::getPairedBoundaryMapping(), ImageMeshGenerator::GetPixelInfo(), ImageMesh::GetPixelInfo(), MaterialStdVectorAux::getRealValue(), MooseMesh::getRefinementMap(), FEProblemBase::getSampler(), DisplacedProblem::getScalarVariable(), FEProblemBase::getScalarVariable(), DisplacedProblem::getStandardVariable(), FEProblemBase::getStandardVariable(), MooseMesh::getSubdomainBoundaryIds(), MooseMesh::getSubdomainID(), DisplacedProblem::getSystem(), FEProblemBase::getSystem(), FEProblemBase::getUserObject(), FEProblemBase::getUserObjectBase(), PerformanceData::getValue(), Residual::getValue(), PerfGraphData::getValue(), LineValueSampler::getValue(), FindValueOnLine::getValueAtPoint(), SubProblem::getVariableHelper(), SubProblem::getVectorTagID(), DisplacedProblem::getVectorVariable(), FEProblemBase::getVectorVariable(), MultiApp::globalAppToLocal(), MooseParsedVectorFunction::gradient(), AdvancedOutput::hasOutputHelper(), CrankNicolson::init(), CSVTimeSequenceStepper::init(), IterationAdaptiveDT::init(), EigenExecutionerBase::init(), Transient::init(), MooseMesh::init(), FEProblemBase::init(), NumPicardIterations::initialize(), PiecewiseBase::initialSetup(), FullSolveMultiApp::initialSetup(), SolutionAux::initialSetup(), Axisymmetric2D3DSolutionFunction::initialSetup(), Exodus::initialSetup(), SolutionFunction::initialSetup(), SolutionUserObject::initialSetup(), FEProblemBase::initialSetup(), AdvancedOutput::initOutputList(), AdvancedOutput::initShowHideLists(), Material::initStatefulProperties(), Function::integral(), InterfaceKernel::InterfaceKernel(), InterfaceTimeKernel::InterfaceTimeKernel(), EigenExecutionerBase::inversePowerIteration(), InversePowerMethod::InversePowerMethod(), IterationAdaptiveDT::IterationAdaptiveDT(), LayeredSideIntegral::LayeredSideIntegral(), LeastSquaresFit::LeastSquaresFit(), LibmeshPartitioner::LibmeshPartitioner(), LinearCombinationFunction::LinearCombinationFunction(), LinearCombinationPostprocessor::LinearCombinationPostprocessor(), LinearNodalConstraint::LinearNodalConstraint(), LineMaterialSamplerBase< Real >::LineMaterialSamplerBase(), LineSearch::lineSearch(), LineValueSampler::LineValueSampler(), MaterialRealTensorValueAux::MaterialRealTensorValueAux(), MaterialRealVectorValueAux::MaterialRealVectorValueAux(), MaterialStdVectorRealGradientAux::MaterialStdVectorRealGradientAux(), MaterialVectorPostprocessor::MaterialVectorPostprocessor(), Distribution::median(), SubProblem::meshChanged(), MeshExtruder::MeshExtruder(), MeshExtruderGenerator::MeshExtruderGenerator(), MeshSideSetGenerator::MeshSideSetGenerator(), SideSetsFromNormals::modify(), SideSetsFromPoints::modify(), BreakMeshByBlockBase::modify(), MeshExtruder::modify(), AddExtraNodeset::modify(), AssignElementSubdomainID::modify(), SmoothMesh::modify(), AddAllSideSetsByNormals::modify(), ElementDeleterBase::modify(), ParsedSubdomainMeshModifier::modify(), RenameBlock::modify(), ImageSubdomain::modify(), BoundingBoxNodeSet::modify(), OrientedSubdomainBoundingBox::modify(), AddSideSetsFromBoundingBox::modify(), SubdomainBoundingBox::modify(), MooseMesh::MooseMesh(), MultiAppMeshFunctionTransfer::MultiAppMeshFunctionTransfer(), MultiAppPostprocessorTransfer::MultiAppPostprocessorTransfer(), NearestNodeDistanceAux::NearestNodeDistanceAux(), NearestNodeValueAux::NearestNodeValueAux(), RenameBlockGenerator::newBlockID(), RenameBlock::newBlockID(), RenameBlockGenerator::newBlockName(), RenameBlock::newBlockName(), NewmarkBeta::NewmarkBeta(), NodalConstraint::NodalConstraint(), NodalScalarKernel::NodalScalarKernel(), NodalVariableValue::NodalVariableValue(), NumDOFs::NumDOFs(), NumNonlinearIterations::NumNonlinearIterations(), NumVars::NumVars(), ElementSideNeighborLayers::operator()(), ElementPointNeighbors::operator()(), RelationshipManager::operator==(), output(), SolutionHistory::output(), AdvancedOutput::outputElementalVariables(), AdvancedOutput::outputInput(), AdvancedOutput::outputNodalVariables(), AdvancedOutput::outputPostprocessors(), AdvancedOutput::outputScalarVariables(), Exodus::outputSetup(), AdvancedOutput::outputSystemInformation(), Console::outputVectorPostprocessors(), AdvancedOutput::outputVectorPostprocessors(), MooseObject::paramError(), PiecewiseBilinear::parse(), ParsedAddSideset::ParsedAddSideset(), ParsedAux::ParsedAux(), ParsedGenerateSideset::ParsedGenerateSideset(), ParsedODEKernel::ParsedODEKernel(), ParsedSubdomainMeshGenerator::ParsedSubdomainMeshGenerator(), ParsedSubdomainMeshModifier::ParsedSubdomainMeshModifier(), PatternedMesh::PatternedMesh(), PetscExternalPartitioner::PetscExternalPartitioner(), PhysicsBasedPreconditioner::PhysicsBasedPreconditioner(), Piecewise::Piecewise(), PiecewiseBilinear::PiecewiseBilinear(), PiecewiseLinearInterpolationMaterial::PiecewiseLinearInterpolationMaterial(), PiecewiseMulticonstant::PiecewiseMulticonstant(), PiecewiseMultiInterpolation::PiecewiseMultiInterpolation(), SolutionUserObject::pointValueGradientWrapper(), SolutionUserObject::pointValueWrapper(), LStableDirk2::postResidual(), LStableDirk3::postResidual(), ImplicitMidpoint::postResidual(), ExplicitTVDRK2::postResidual(), LStableDirk4::postResidual(), AStableDirk4::postResidual(), ExplicitRK2::postResidual(), Predictor::Predictor(), SolutionUserObject::readExodusII(), SolutionUserObject::readXda(), EqualValueEmbeddedConstraint::reinitConstraint(), RelativeSolutionDifferenceNorm::RelativeSolutionDifferenceNorm(), RenameBlock::RenameBlock(), RenameBlockGenerator::RenameBlockGenerator(), RenameBoundaryGenerator::RenameBoundaryGenerator(), RinglebMesh::RinglebMesh(), RinglebMeshGenerator::RinglebMeshGenerator(), ScalarComponentIC::ScalarComponentIC(), BicubicSplineFunction::secondDerivative(), FEProblemBase::setCoordSystem(), PiecewiseBase::setData(), EigenProblem::setEigenproblemType(), Sampler::setNumberOfRequiedRandomSeeds(), Exodus::setOutputDimension(), Split::setup(), TransientMultiApp::setupApp(), TimeSequenceStepperBase::setupSequence(), Transient::setupTimeIntegrator(), SideSetsFromBoundingBoxGenerator::SideSetsFromBoundingBoxGenerator(), SideSetsFromNormals::SideSetsFromNormals(), SideSetsFromNormalsGenerator::SideSetsFromNormalsGenerator(), SideSetsFromPoints::SideSetsFromPoints(), SideSetsFromPointsGenerator::SideSetsFromPointsGenerator(), SolutionTimeAdaptiveDT::SolutionTimeAdaptiveDT(), SolutionUserObject::SolutionUserObject(), ActuallyExplicitEuler::solve(), FullSolveMultiApp::solveStep(), UserObject::spatialValue(), SphericalAverage::SphericalAverage(), SpiralAnnularMesh::SpiralAnnularMesh(), SpiralAnnularMeshGenerator::SpiralAnnularMeshGenerator(), StitchedMesh::StitchedMesh(), NodalUserObject::subdomainSetup(), GeneralUserObject::subdomainSetup(), Constraint::subdomainSetup(), Console::systemInfoFlags(), Terminator::Terminator(), TestSetupPostprocessorDataActionFunction::TestSetupPostprocessorDataActionFunction(), ThreadedGeneralUserObject::ThreadedGeneralUserObject(), ThreadedGeneralUserObject::threadJoin(), DiscreteElementUserObject::threadJoin(), GeneralUserObject::threadJoin(), TiledMeshGenerator::TiledMeshGenerator(), Function::timeDerivative(), TimeExtremeValue::TimeExtremeValue(), TimePeriod::TimePeriod(), VectorPostprocessorVisualizationAux::timestepSetup(), MultiAppCopyTransfer::transfer(), MultiAppMeshFunctionTransfer::transferVariable(), Transient::Transient(), TransientMultiApp::TransientMultiApp(), FEProblemBase::uDotDotOldRequested(), FEProblemBase::uDotOldRequested(), EqualValueBoundaryConstraint::updateConstrainedNodes(), SolutionUserObject::updateExodusBracketingTimeIndices(), Axisymmetric2D3DSolutionFunction::value(), ValueRangeMarker::ValueRangeMarker(), ValueThresholdMarker::ValueThresholdMarker(), MultiAppTransfer::variableIntegrityCheck(), VariableTimeIntegrationAux::VariableTimeIntegrationAux(), VectorNodalBC::VectorNodalBC(), VectorOfPostprocessors::VectorOfPostprocessors(), VectorPostprocessorFunction::VectorPostprocessorFunction(), MooseParsedGradFunction::vectorValue(), MooseParsedFunction::vectorValue(), VolumeHistogram::VolumeHistogram(), VTKOutput::VTKOutput(), DOFMapOutput::writeStreamToFile(), and Console::writeStreamToFile().

  {
    std::ostringstream oss;
    moose::internal::mooseStreamAll(oss, std::forward<Args>(args)...);
    std::string msg = oss.str();
    callMooseErrorRaw(msg, &_app);
  }

mooseInfo()

template<typename... Args>

void MooseObject::mooseInfo ( Args &&...  args ) const

inlineinherited

Definition at line 161 of file MooseObject.h.

Referenced by DerivativeParsedMaterialHelper::assembleDerivatives(), AStableDirk4::AStableDirk4(), ExplicitRK2::ExplicitRK2(), ExplicitTVDRK2::ExplicitTVDRK2(), ParsedMaterialHelper::functionsOptimize(), ImplicitMidpoint::ImplicitMidpoint(), LStableDirk2::LStableDirk2(), LStableDirk3::LStableDirk3(), LStableDirk4::LStableDirk4(), and MooseObject::paramInfo().

  {
    moose::internal::mooseInfoStream(_console, std::forward<Args>(args)...);
  }

mooseWarning()

template<typename... Args>

void MooseObject::mooseWarning ( Args &&...  args ) const

inlineinherited

Definition at line 149 of file MooseObject.h.

Referenced by OversampleOutput::cloneMesh(), GapValueAux::computeValue(), PerflogDumper::execute(), ElementQualityChecker::finalize(), FiniteDifferencePreconditioner::FiniteDifferencePreconditioner(), ElementSubdomainIDGenerator::generate(), MooseMesh::getBoundaryIDs(), FEProblemBase::getMaterial(), MooseMesh::getSubdomainIDs(), DerivativeFunctionMaterialBase::initialSetup(), AdvancedOutput::initPostprocessorOrVectorPostprocessorLists(), LeastSquaresFit::LeastSquaresFit(), MaterialVectorPostprocessor::MaterialVectorPostprocessor(), AssignElementSubdomainID::modify(), MultiAppTransfer::MultiAppTransfer(), NewmarkBeta::NewmarkBeta(), NodalPatchRecovery::NodalPatchRecovery(), NonlocalIntegratedBC::NonlocalIntegratedBC(), NonlocalKernel::NonlocalKernel(), Output::Output(), MooseObject::paramWarning(), Executioner::problem(), Material::resetQpProperties(), FEProblemBase::sizeZeroes(), TransientMultiApp::solveStep(), Tecplot::Tecplot(), and Checkpoint::updateCheckpointFiles().

  {
    moose::internal::mooseWarningStream(_console, std::forward<Args>(args)...);
  }

name()

const std::string& MooseObject::name ( ) const

inlineinherited

Get the name of the object.

Returns

The name of the object

Definition at line 51 of file MooseObject.h.

Referenced by GridPartitioner::_do_partition(), FEProblemBase::addADJacobianMaterial(), FEProblemBase::addADResidualMaterial(), Executioner::addAttributeReporter(), DumpObjectsProblem::addAuxKernel(), FEProblemBase::addAuxKernel(), DumpObjectsProblem::addAuxScalarKernel(), FEProblemBase::addAuxScalarKernel(), DumpObjectsProblem::addBoundaryCondition(), FEProblemBase::addBoundaryCondition(), DumpObjectsProblem::addConstraint(), FEProblemBase::addConstraint(), FEProblemBase::addDamper(), DumpObjectsProblem::addDGKernel(), FEProblemBase::addDGKernel(), DumpObjectsProblem::addDiracKernel(), FEProblemBase::addDiracKernel(), FEProblemBase::addDistribution(), DumpObjectsProblem::addFunction(), FEProblemBase::addFunction(), FEProblemBase::addIndicator(), DumpObjectsProblem::addInitialCondition(), FEProblemBase::addInitialCondition(), DumpObjectsProblem::addInterfaceKernel(), FEProblemBase::addInterfaceKernel(), DumpObjectsProblem::addKernel(), FEProblemBase::addKernel(), FEProblemBase::addMarker(), DumpObjectsProblem::addMaterial(), FEProblemBase::addMaterial(), FEProblemBase::addMaterialHelper(), MooseMesh::addMortarInterface(), FEProblemBase::addMultiApp(), DumpObjectsProblem::addNodalKernel(), FEProblemBase::addNodalKernel(), FEProblemBase::addPostprocessor(), FEProblemBase::addPredictor(), FEProblemBase::addSampler(), DumpObjectsProblem::addScalarKernel(), FEProblemBase::addScalarKernel(), FEProblemBase::addTimeIntegrator(), FEProblemBase::addTransfer(), FEProblemBase::addUserObject(), FEProblemBase::addVectorPostprocessor(), Output::advancedExecuteOn(), AllSideSetsByNormalsGenerator::AllSideSetsByNormalsGenerator(), MultiApp::appPostprocessorValue(), MultiApp::appProblem(), MultiApp::appProblemBase(), MultiApp::appUserObjectBase(), DerivativeParsedMaterialHelper::assembleDerivatives(), AStableDirk4::AStableDirk4(), Function::average(), BreakMeshByBlockGenerator::BreakMeshByBlockGenerator(), ChangeOverTimePostprocessor::ChangeOverTimePostprocessor(), FEProblemBase::checkDependMaterialsHelper(), Damper::checkMinDamping(), Material::checkStatefulSanity(), CompositeFunction::CompositeFunction(), Material::computeSubdomainProperties(), VectorPostprocessorVisualizationAux::computeValue(), AuxKernel::coupledCallback(), AuxKernel::coupledDot(), AuxKernel::coupledDotDu(), MultiApp::createApp(), FEProblemBase::declareVectorPostprocessorVector(), DOFMapOutput::demangle(), DerivativeSumMaterial::DerivativeSumMaterial(), DGKernel::DGKernel(), DumpObjectsProblem::dumpObjectHelper(), ElementValueSampler::ElementValueSampler(), MooseMesh::errorIfDistributedMesh(), AB2PredictorCorrector::estimateTimeError(), SolutionUserObject::evalMeshFunction(), SolutionUserObject::evalMeshFunctionGradient(), SolutionUserObject::evalMultiValuedMeshFunction(), SolutionUserObject::evalMultiValuedMeshFunctionGradient(), MultiAppPostprocessorTransfer::execute(), MultiAppPostprocessorInterpolationTransfer::execute(), MultiAppVariableValueSamplePostprocessorTransfer::execute(), StatisticsVectorPostprocessor::execute(), MultiAppNearestNodeTransfer::execute(), PointValue::execute(), MultiAppPostprocessorToAuxScalarTransfer::execute(), MultiAppScalarToAuxScalarTransfer::execute(), MultiAppVariableValueSampleTransfer::execute(), MultiAppMeshFunctionTransfer::execute(), MultiAppInterpolationTransfer::execute(), MultiAppUserObjectTransfer::execute(), MultiAppProjectionTransfer::execute(), MultiAppVectorPostprocessorTransfer::execute(), HistogramVectorPostprocessor::execute(), MultiAppCopyTransfer::execute(), Exodus::Exodus(), FileOutput::FileOutput(), MultiApp::fillPositions(), PointSamplerBase::finalize(), DerivativeParsedMaterialHelper::findMatPropDerivative(), FunctionDT::FunctionDT(), GeneralUserObject::GeneralUserObject(), LowerDBlockFromSidesetGenerator::generate(), StitchedMeshGenerator::generate(), Material::getADMaterialProperty(), MultiApp::getBoundingBox(), MooseObject::getCheckedPointerParam(), Control::getControllableParameterByName(), Control::getControllableValue(), Control::getControllableValueByName(), FEProblemBase::getDistribution(), MultiApp::getExecutioner(), OutputWarehouse::getFileNumbers(), FEProblemBase::getFunction(), SolutionUserObject::getLocalVarIndex(), Marker::getMarkerValue(), FEProblemBase::getMaterial(), NodalPatchRecovery::getMaterialProperty(), AuxKernel::getMaterialProperty(), Material::getMaterialProperty(), SubProblem::getMaterialPropertyBlockNames(), SubProblem::getMaterialPropertyBoundaryNames(), NodalPatchRecovery::getMaterialPropertyOld(), AuxKernel::getMaterialPropertyOld(), Material::getMaterialPropertyOld(), NodalPatchRecovery::getMaterialPropertyOlder(), AuxKernel::getMaterialPropertyOlder(), Material::getMaterialPropertyOlder(), MeshGenerator::getMesh(), MooseMesh::getMortarInterfaceByName(), OutputWarehouse::getOutput(), MooseObject::getParam(), GeneralUserObject::getPostprocessorValue(), AuxKernel::getPostprocessorValue(), FEProblemBase::getPostprocessorValue(), GeneralUserObject::getPostprocessorValueByName(), AuxKernel::getPostprocessorValueByName(), FEProblemBase::getPostprocessorValueOld(), FEProblemBase::getPostprocessorValueOlder(), FEProblemBase::getSampler(), AuxKernel::getScatterVectorPostprocessorValue(), FEProblemBase::getScatterVectorPostprocessorValue(), AuxKernel::getScatterVectorPostprocessorValueByName(), FEProblemBase::getScatterVectorPostprocessorValueOld(), Transient::getTimeStepperName(), AuxKernel::getUserObject(), InitialConditionBase::getUserObject(), FEProblemBase::getUserObject(), InitialConditionBase::getUserObjectBase(), AuxKernel::getUserObjectBase(), FEProblemBase::getUserObjectBase(), AuxKernel::getUserObjectByName(), InitialConditionBase::getUserObjectByName(), GeneralUserObject::getVectorPostprocessorValue(), AuxKernel::getVectorPostprocessorValue(), FEProblemBase::getVectorPostprocessorValue(), GeneralUserObject::getVectorPostprocessorValueByName(), AuxKernel::getVectorPostprocessorValueByName(), FEProblemBase::getVectorPostprocessorValueOld(), FEProblemBase::hasFunction(), AdvancedOutput::hasOutputHelper(), FEProblemBase::hasPostprocessor(), FEProblemBase::hasUserObject(), FEProblemBase::hasVectorPostprocessor(), FEProblemBase::init(), AdvancedOutput::initExecutionTypes(), AttribName::initFrom(), CSVReader::initialize(), StatisticsVectorPostprocessor::initialize(), HistogramVectorPostprocessor::initialize(), MultiAppProjectionTransfer::initialSetup(), DerivativeFunctionMaterialBase::initialSetup(), SolutionUserObject::initialSetup(), AdvancedOutput::initOutputList(), FEProblemBase::initPostprocessorData(), AdvancedOutput::initPostprocessorOrVectorPostprocessorLists(), Material::initStatefulProperties(), FEProblemBase::initVectorPostprocessorData(), Function::integral(), InterfaceKernel::InterfaceKernel(), MooseObject::isParamValid(), LinearCombinationFunction::LinearCombinationFunction(), Marker::Marker(), MatDiffusionBase< Real >::MatDiffusionBase(), MaterialDerivativeTestKernelBase< Real >::MaterialDerivativeTestKernelBase(), MaterialVectorPostprocessor::MaterialVectorPostprocessor(), Distribution::median(), MemoryUsageReporter::MemoryUsageReporter(), MeshSideSetGenerator::MeshSideSetGenerator(), ElementDeleterBase::modify(), MooseVariableInterface< Real >::MooseVariableInterface(), NearestPointBase< LayeredAverage >::NearestPointBase(), NodalValueSampler::NodalValueSampler(), NodalVariableValue::NodalVariableValue(), DOFMapOutput::output(), Output::Output(), AdvancedOutput::outputElementalVariables(), AdvancedOutput::outputInput(), AdvancedOutput::outputNodalVariables(), ConsoleUtils::outputOutputInformation(), Nemesis::outputPostprocessors(), Exodus::outputPostprocessors(), AdvancedOutput::outputPostprocessors(), AdvancedOutput::outputScalarVariables(), AdvancedOutput::outputSystemInformation(), AdvancedOutput::outputVectorPostprocessors(), ParsedAddSideset::ParsedAddSideset(), ParsedAux::ParsedAux(), ParsedGenerateSideset::ParsedGenerateSideset(), ParsedODEKernel::ParsedODEKernel(), ParsedSubdomainMeshGenerator::ParsedSubdomainMeshGenerator(), ParsedSubdomainMeshModifier::ParsedSubdomainMeshModifier(), PointSamplerBase::PointSamplerBase(), Registry::registerObjectsTo(), FEProblemBase::registerRandomInterface(), Material::resetQpProperties(), Sampler::Sampler(), ScalarComponentIC::ScalarComponentIC(), MooseMesh::setBoundaryName(), Control::setControllableValue(), Control::setControllableValueByName(), OutputWarehouse::setFileNumbers(), Exodus::setOutputDimension(), MooseMesh::setSubdomainName(), Split::setup(), TransientMultiApp::setupApp(), SideSetsFromNormalsGenerator::SideSetsFromNormalsGenerator(), SideSetsFromPointsGenerator::SideSetsFromPointsGenerator(), SideValueSampler::SideValueSampler(), TransientMultiApp::solveStep(), UserObject::spatialValue(), SphericalAverage::SphericalAverage(), StitchedMesh::StitchedMesh(), SubProblem::storeBoundaryDelayedCheckMatProp(), SubProblem::storeBoundaryMatPropName(), SubProblem::storeBoundaryZeroMatProp(), SubProblem::storeSubdomainDelayedCheckMatProp(), SubProblem::storeSubdomainMatPropName(), SubProblem::storeSubdomainZeroMatProp(), TaggingInterface::TaggingInterface(), ThreadedGeneralUserObject::ThreadedGeneralUserObject(), TiledMeshGenerator::TiledMeshGenerator(), Function::timeDerivative(), VectorPostprocessorVisualizationAux::timestepSetup(), TransientMultiApp::TransientMultiApp(), MultiAppTransfer::variableIntegrityCheck(), and AdvancedOutput::wantOutput().

{ return _name; }

onInterval()

bool Output::onInterval ( )

protectedvirtualinherited

Returns true if the output interval is satisfied.

Definition at line 211 of file Output.C.

Referenced by Console::output(), OversampleOutput::outputStep(), and Output::outputStep().

{
  // The output flag to return
  bool output = false;

  // Return true if the current step on the current output interval and within the output time range
  // and within the output step range
  if (_time >= _start_time && _time <= _end_time && _t_step >= _start_step &&
      _t_step <= _end_step && (_t_step % _interval) == 0)
    output = true;

  // Return false if 'sync_only' is set to true
  if (_sync_only)
    output = false;

  // If sync times are not skipped, return true if the current time is a sync_time
  if (_sync_times.find(_time) != _sync_times.end())
    output = true;

  // Return the output status
  return output;
}

output()

void XDA::output ( const ExecFlagType &  type )

overrideprotectedvirtual

Overload the Output::output method, this is required for XDA output due to the method utlized for outputing single/global parameters.

Reimplemented from AdvancedOutput.

Definition at line 46 of file XDA.C.

Referenced by filename().

{
  // Strings for the two filenames to be written
  std::string es_name = filename();
  std::string mesh_name = es_name;

  // Make sure the filename has an extension
  if (es_name.size() < 4)
    mooseError("Unacceptable filename, you must include an extension (.xda or .xdr).");

  // Insert the mesh suffix
  mesh_name.insert(mesh_name.size() - 4, "_mesh");

  // Set the binary flag
  XdrMODE mode = _binary ? ENCODE : WRITE;

  // Write the files
  _mesh_ptr->getMesh().write(mesh_name);
  _es_ptr->write(
      es_name, mode, EquationSystems::WRITE_DATA | EquationSystems::WRITE_ADDITIONAL_DATA);
  _file_num++;
}

outputElementalVariables()

void AdvancedOutput::outputElementalVariables ( )

protectedvirtualinherited

Performs output of elemental nonlinear variables The child class must define this method to output the nonlinear variables as desired.

See also

Exodus::outputElementalVariables

Reimplemented in Exodus.

Definition at line 192 of file AdvancedOutput.C.

Referenced by AdvancedOutput::output().

{
  mooseError(
      "Individual output of elemental variables is not support for this output object named '",
      name(),
      "'");
}

outputInput()

void AdvancedOutput::outputInput ( )

protectedvirtualinherited

Performs the output of the input file By default this method does nothing and is not called, the individual Output objects are responsible for calling it.

Reimplemented in Exodus, and Console.

Definition at line 232 of file AdvancedOutput.C.

Referenced by AdvancedOutput::output().

{
  mooseError("Output of the input file information is not support for this output object named '",
             name(),
             "'");
}

outputNodalVariables()

void AdvancedOutput::outputNodalVariables ( )

protectedvirtualinherited

Performs output of nodal nonlinear variables The child class must define this method to output the nonlinear variables as desired.

See also

Exodus::outputNodalVariables

Reimplemented in Exodus.

Definition at line 184 of file AdvancedOutput.C.

Referenced by AdvancedOutput::output().

{
  mooseError("Individual output of nodal variables is not support for the output object named '",
             name(),
             "'");
}

outputPostprocessors()

void AdvancedOutput::outputPostprocessors ( )

protectedvirtualinherited

Performs output of postprocessors The child class must define this method to output the postprocessors as desired.

See also

Exodus::outputPostprocessors

Reimplemented in Console, Exodus, CSV, Nemesis, and TableOutput.

Definition at line 201 of file AdvancedOutput.C.

Referenced by AdvancedOutput::output().

{
  mooseError("Individual output of postprocessors is not support for this output object named '",
             name(),
             "'");
}

outputScalarVariables()

void AdvancedOutput::outputScalarVariables ( )

protectedvirtualinherited

Performs output of scalar variables The child class must define this method to output the scalar variables as desired.

See also

Exodus::outputScalarVariables

Reimplemented in Exodus, Console, Nemesis, CSV, and TableOutput.

Definition at line 218 of file AdvancedOutput.C.

Referenced by AdvancedOutput::output().

{
  mooseError(
      "Individual output of scalars is not support for this output object named '", name(), "'");
}

outputStep()

void OversampleOutput::outputStep ( const ExecFlagType &  type )

overridevirtualinherited

A single call to this function should output all the necessary data for a single timestep.

Parameters

type	The type execution flag (see Moose.h)

See also

outputNodalVariables outputElementalVariables outputScalarVariables outputPostprocessors

Reimplemented from Output.

Definition at line 73 of file OversampleOutput.C.

{
  // Output is not allowed
  if (!_allow_output && type != EXEC_FORCED)
    return;

  // If recovering disable output of initial condition, it was already output
  if (type == EXEC_INITIAL && _app.isRecovering())
    return;

  // Return if the current output is not on the desired interval
  if (type != EXEC_FINAL && !onInterval())
    return;

  // Call the output method (this has the file checking built in b/c OversampleOutput is a
  // FileOutput)
  if (shouldOutput(type))
  {
    TIME_SECTION(_output_step_timer);
    updateOversample();
    output(type);
  }
}

outputSystemInformation()

void AdvancedOutput::outputSystemInformation ( )

protectedvirtualinherited

Reimplemented in Console.

Definition at line 225 of file AdvancedOutput.C.

Referenced by AdvancedOutput::output().

{
  mooseError(
      "Output of system information is not support for this output object named '", name(), "'");
}

outputVectorPostprocessors()

void AdvancedOutput::outputVectorPostprocessors ( )

protectedvirtualinherited

Performs output of VectorPostprocessors The child class must define this method to output the VectorPostprocessors as desired.

Reimplemented in Console, CSV, and TableOutput.

Definition at line 209 of file AdvancedOutput.C.

Referenced by AdvancedOutput::output().

{
  mooseError(
      "Individual output of VectorPostprocessors is not support for this output object named '",
      name(),
      "'");
}

paramError()

template<typename... Args>

void MooseObject::paramError ( const std::string &  param, Args...  args  )

inlineinherited

Emits an error prefixed with the file and line number of the given param (from the input file) along with the full parameter path+name followed by the given args as the message.

If this object's parameters were not created directly by the Parser, then this function falls back to the normal behavior of mooseError - only printing a message using the given args.

Definition at line 100 of file MooseObject.h.

Referenced by ADKernel< compute_stage >::ADKernel(), DGKernel::DGKernel(), ElementValueSampler::ElementValueSampler(), IntegratedBC::IntegratedBC(), Kernel::Kernel(), NodalBC::NodalBC(), NodalEqualValueConstraint::NodalEqualValueConstraint(), NodalKernel::NodalKernel(), NodalValueSampler::NodalValueSampler(), RandomIC::RandomIC(), and MultiAppCopyTransfer::transfer().

  {
    auto prefix = param + ": ";
    if (!_pars.inputLocation(param).empty())
      prefix = _pars.inputLocation(param) + ": (" + _pars.paramFullpath(param) + "):\n";
    mooseError(prefix, args...);
  }

parameters()

const InputParameters& MooseObject::parameters ( ) const

inlineinherited

Get the parameters of the object.

Returns

The parameters of the object

Definition at line 57 of file MooseObject.h.

Referenced by FEProblemBase::addADJacobianMaterial(), FEProblemBase::addADResidualMaterial(), DumpObjectsProblem::addAuxKernel(), FEProblemBase::addAuxKernel(), DumpObjectsProblem::addAuxScalarKernel(), FEProblemBase::addAuxScalarKernel(), DumpObjectsProblem::addBoundaryCondition(), FEProblemBase::addBoundaryCondition(), DumpObjectsProblem::addConstraint(), FEProblemBase::addConstraint(), FEProblemBase::addDamper(), DumpObjectsProblem::addDGKernel(), FEProblemBase::addDGKernel(), DumpObjectsProblem::addDiracKernel(), FEProblemBase::addDiracKernel(), FEProblemBase::addDistribution(), DumpObjectsProblem::addFunction(), FEProblemBase::addFunction(), FEProblemBase::addIndicator(), DumpObjectsProblem::addInitialCondition(), FEProblemBase::addInitialCondition(), DumpObjectsProblem::addInterfaceKernel(), FEProblemBase::addInterfaceKernel(), DumpObjectsProblem::addKernel(), FEProblemBase::addKernel(), FEProblem::addLineSearch(), FEProblemBase::addMarker(), DumpObjectsProblem::addMaterial(), FEProblemBase::addMaterial(), FEProblemBase::addMaterialHelper(), FEProblemBase::addMultiApp(), DumpObjectsProblem::addNodalKernel(), FEProblemBase::addNodalKernel(), FEProblemBase::addOutput(), FEProblemBase::addPostprocessor(), FEProblemBase::addPredictor(), FEProblemBase::addSampler(), DumpObjectsProblem::addScalarKernel(), FEProblemBase::addScalarKernel(), FEProblemBase::addTimeIntegrator(), FEProblemBase::addTransfer(), FEProblemBase::addUserObject(), FEProblemBase::addVectorPostprocessor(), AdvancedOutput::AdvancedOutput(), assemble_l2(), Moose::assemble_matrix(), AuxKernel::AuxKernel(), AuxScalarKernel::AuxScalarKernel(), BoundsAux::BoundsAux(), LibmeshPartitioner::clone(), OversampleOutput::cloneMesh(), Moose::compute_bounds(), Moose::compute_jacobian(), Moose::compute_nearnullspace(), Moose::compute_nullspace(), Moose::compute_postcheck(), Moose::compute_transpose_nullspace(), Console::Console(), DumpObjectsProblem::deduceNecessaryParameters(), DumpObjectsProblem::dumpObjectHelper(), EigenProblem::EigenProblem(), Eigenvalue::Eigenvalue(), Executioner::Executioner(), Exodus::Exodus(), FEProblem::FEProblem(), GapValueAux::GapValueAux(), MooseObject::getCheckedPointerParam(), MooseMesh::init(), BlockRestrictable::initializeBlockRestrictable(), FEProblemBase::initNullSpaceVectors(), InterfaceKernel::InterfaceKernel(), isValid(), LayeredSideIntegral::LayeredSideIntegral(), MooseVariableInterface< Real >::MooseVariableInterface(), NearestPointBase< LayeredAverage >::NearestPointBase(), NodeFaceConstraint::NodeFaceConstraint(), PenetrationAux::PenetrationAux(), PiecewiseBilinear::PiecewiseBilinear(), PiecewiseLinearInterpolationMaterial::PiecewiseLinearInterpolationMaterial(), MultiAppProjectionTransfer::projectSolution(), RandomIC::RandomIC(), InputParameterWarehouse::removeInputParameters(), FEProblem::setInputParametersFEProblem(), FEProblemBase::setInputParametersFEProblem(), DumpObjectsProblem::stringifyParameters(), and Transient::Transient().

{ return _pars; }

paramInfo()

template<typename... Args>

void MooseObject::paramInfo ( const std::string &  param, Args...  args  )

inlineinherited

Emits an informational message prefixed with the file and line number of the given param (from the input file) along with the full parameter path+name followed by the given args as the message.

If this object's parameters were not created directly by the Parser, then this function falls back to the normal behavior of mooseInfo - only printing a message using the given args.

Definition at line 131 of file MooseObject.h.

  {
    auto prefix = param + ": ";
    if (!_pars.inputLocation(param).empty())
      prefix = _pars.inputLocation(param) + ": (" + _pars.paramFullpath(param) + "):\n";
    mooseInfo(prefix, args...);
  }

paramWarning()

template<typename... Args>

void MooseObject::paramWarning ( const std::string &  param, Args...  args  )

inlineinherited

Emits a warning prefixed with the file and line number of the given param (from the input file) along with the full parameter path+name followed by the given args as the message.

If this object's parameters were not created directly by the Parser, then this function falls back to the normal behavior of mooseWarning - only printing a message using the given args.

Definition at line 115 of file MooseObject.h.

  {
    auto prefix = param + ": ";
    if (!_pars.inputLocation(param).empty())
      prefix = _pars.inputLocation(param) + ": (" + _pars.paramFullpath(param) + "):\n";
    mooseWarning(prefix, args...);
  }

registerTimedSection()

PerfID PerfGraphInterface::registerTimedSection ( const std::string &  section_name, const unsigned int  level  )

protectedinherited

Call to register a named section for timing.

Parameters

section_name	The name of the code section to be timed
level	The importance of the timer - lower is more important (0 will always come out)

Returns

The ID of the section - use when starting timing

Definition at line 50 of file PerfGraphInterface.C.

{
  if (_prefix != "")
    return _perf_graph.registerSection(_prefix + "::" + section_name, level);
  else
    return _perf_graph.registerSection(section_name, level);
}

residualSetup()

void SetupInterface::residualSetup ( )

virtualinherited

Gets called just before the residual is computed and before this object is asked to do its job.

Definition at line 57 of file SetupInterface.C.

{
}

setFileNumber()

void FileOutput::setFileNumber ( unsigned int  num )

inherited

Sets the file number manually.

This method was implemented for the MultiApp system, particularly when reseting an application and a new output file is desired after the reset.

Definition at line 178 of file FileOutput.C.

Referenced by OutputWarehouse::setFileNumbers().

{
  _file_num = num;
}

shouldOutput()

bool AdvancedOutput::shouldOutput ( const ExecFlagType &  type )

protectedvirtualinherited

Handles logic for determining if a step should be output.

Returns

True if a call if output should be preformed

Reimplemented from FileOutput.

Definition at line 240 of file AdvancedOutput.C.

Referenced by Nemesis::output(), and OversampleOutput::outputStep().

{
  if (!checkFilename())
    return false;

  if (hasOutput(type))
    return true;
  else
    return Output::shouldOutput(type);
}

subdomainSetup()

void SetupInterface::subdomainSetup ( )

virtualinherited

Gets called when the subdomain changes (i.e.

in a Jacobian or residual loop) and before this object is asked to do its job

Reimplemented in Material, Constraint, GeneralUserObject, NodalUserObject, and ThreadedGeneralUserObject.

Definition at line 62 of file SetupInterface.C.

{
}

time()

Real PetscOutput::time ( )

overridevirtualinherited

Get the output time.

This outputter enables the ability to perform output on the nonlinear and linear iterations performed by PETSc. To separate theses outputs within the output a pseudo time is defined, this function provides this time and it should be used in place of _time from Outputter.

Reimplemented from Output.

Definition at line 253 of file PetscOutput.C.

Referenced by FileOutput::FileOutput(), Tecplot::output(), Nemesis::output(), Exodus::outputEmptyTimestep(), Exodus::outputNodalVariables(), TableOutput::outputPostprocessors(), TableOutput::outputScalarVariables(), and Console::writeTimestepInformation().

{
  if (_on_nonlinear_residual)
    return _nonlinear_time;
  else if (_on_linear_residual)
    return _linear_time;
  else
    return Output::time();
}

timeOld()

Real Output::timeOld ( )

virtualinherited

Get the old output time.

Returns

The old output time, which may be different than the simulation time

See also

time()

Definition at line 244 of file Output.C.

Referenced by Console::writeTimestepInformation().

{
  if (_transient)
    return _time_old;
  else
    return _t_step - 1;
}

timeStep()

int Output::timeStep ( )

virtualinherited

Get the current time step.

Definition at line 271 of file Output.C.

Referenced by Checkpoint::filename(), CSV::getVectorPostprocessorFileName(), and Console::writeTimestepInformation().

{
  return _t_step;
}

timestepSetup()

void SetupInterface::timestepSetup ( )

virtualinherited

Gets called at the beginning of the timestep before this object is asked to do its job.

Reimplemented in SolutionUserObject, VectorPostprocessorVisualizationAux, NumNonlinearIterations, EqualValueEmbeddedConstraint, VectorMemoryUsage, and MemoryUsage.

Definition at line 47 of file SetupInterface.C.

{
}

type()

const std::string& MooseObject::type ( ) const

inlineinherited

Get the type of this object.

Returns

the name of the type of this object

Definition at line 45 of file MooseObject.h.

Referenced by DumpObjectsProblem::addAuxKernel(), DumpObjectsProblem::addAuxScalarKernel(), FEProblemBase::addAuxScalarVariable(), DumpObjectsProblem::addAuxVariable(), DisplacedProblem::addAuxVariable(), FEProblemBase::addAuxVariable(), DumpObjectsProblem::addBoundaryCondition(), DumpObjectsProblem::addConstraint(), DumpObjectsProblem::addDGKernel(), DumpObjectsProblem::addDiracKernel(), FEProblemBase::addDistribution(), DumpObjectsProblem::addFunction(), FEProblemBase::addFunction(), DumpObjectsProblem::addInitialCondition(), DumpObjectsProblem::addInterfaceKernel(), DumpObjectsProblem::addKernel(), DumpObjectsProblem::addMaterial(), DumpObjectsProblem::addNodalKernel(), FEProblemBase::addPredictor(), FEProblemBase::addSampler(), DumpObjectsProblem::addScalarKernel(), FEProblemBase::addScalarVariable(), PhysicsBasedPreconditioner::addSystem(), FEProblemBase::addTimeIntegrator(), DumpObjectsProblem::addVariable(), DisplacedProblem::addVariable(), FEProblemBase::addVariable(), FEProblemBase::advanceMultiApps(), FEProblemBase::backupMultiApps(), MooseMesh::buildRefinementAndCoarseningMaps(), FEProblemBase::computeAuxiliaryKernels(), ElemElemConstraint::computeElemNeighJacobian(), InterfaceKernel::computeElemNeighJacobian(), DGKernel::computeElemNeighJacobian(), ElemElemConstraint::computeElemNeighResidual(), InterfaceKernel::computeElemNeighResidual(), DGKernel::computeElemNeighResidual(), FEProblemBase::computeMultiAppsDT(), InterfaceKernel::computeOffDiagElemNeighJacobian(), DGKernel::computeOffDiagElemNeighJacobian(), DGConvection::computeQpJacobian(), CoupledTiedValueConstraint::computeQpJacobian(), TiedValueConstraint::computeQpJacobian(), DGDiffusion::computeQpJacobian(), LinearNodalConstraint::computeQpJacobian(), EqualValueBoundaryConstraint::computeQpJacobian(), EqualValueEmbeddedConstraint::computeQpJacobian(), CoupledTiedValueConstraint::computeQpOffDiagJacobian(), EqualValueEmbeddedConstraint::computeQpOffDiagJacobian(), DGConvection::computeQpResidual(), CoupledTiedValueConstraint::computeQpResidual(), TiedValueConstraint::computeQpResidual(), LinearNodalConstraint::computeQpResidual(), DGDiffusion::computeQpResidual(), EqualValueBoundaryConstraint::computeQpResidual(), EqualValueEmbeddedConstraint::computeQpResidual(), FEProblemBase::computeUserObjects(), DisplacedProblem::createQRules(), FEProblemBase::createQRules(), DumpObjectsProblem::deduceNecessaryParameters(), DumpObjectsProblem::dumpObjectHelper(), FEProblemBase::duplicateVariableCheck(), FEProblemBase::execMultiApps(), FEProblemBase::execMultiAppTransfers(), FEProblemBase::execTransfers(), FEProblemBase::finishMultiAppStep(), ElementSubdomainIDGenerator::generate(), ElementGenerator::getElemType(), FEProblemBase::getMaterial(), FEProblemBase::getMaterialData(), FEProblemBase::getTransfers(), AdvancedOutput::hasOutput(), FEProblemBase::incrementMultiAppTStep(), AdvancedOutput::initAvailableLists(), SolutionUserObject::initialSetup(), AdvancedOutput::initShowHideLists(), AssignElementSubdomainID::modify(), ControlOutput::output(), Gnuplot::output(), Exodus::output(), CSV::output(), Console::output(), Nemesis::output(), AdvancedOutput::output(), OversampleOutput::outputStep(), Output::outputStep(), FEProblemBase::outputStep(), FEProblemBase::restoreMultiApps(), FEProblemBase::setCoupling(), FileOutput::shouldOutput(), Output::shouldOutput(), AdvancedOutput::shouldOutput(), DisplacedProblem::updateGeomSearch(), FEProblemBase::updateGeomSearch(), and AdvancedOutput::wantOutput().

{ return _type; }

updateOversample()

void OversampleOutput::updateOversample ( )

protectedvirtualinherited

Performs the update of the solution vector for the oversample/re-positioned mesh.

Definition at line 201 of file OversampleOutput.C.

Referenced by OversampleOutput::outputStep().

{
  // Do nothing if oversampling and changing position are not enabled
  if (!_oversample && !_change_position)
    return;

  // Get a reference to actual equation system
  EquationSystems & source_es = _problem_ptr->es();

  // Loop throuch each system
  for (unsigned int sys_num = 0; sys_num < source_es.n_systems(); ++sys_num)
  {
    if (!_mesh_functions[sys_num].empty())
    {
      // Get references to the source and destination systems
      System & source_sys = source_es.get_system(sys_num);
      System & dest_sys = _oversample_es->get_system(sys_num);

      // Update the solution for the oversampled mesh
      _serialized_solution->clear();
      _serialized_solution->init(source_sys.n_dofs(), false, SERIAL);
      source_sys.solution->localize(*_serialized_solution);

      // Update the mesh functions
      for (unsigned int var_num = 0; var_num < _mesh_functions[sys_num].size(); ++var_num)
      {

        // If the mesh has change the MeshFunctions need to be re-built, otherwise simply clear it
        // for re-initialization
        if (!_mesh_functions[sys_num][var_num] || _oversample_mesh_changed)
          _mesh_functions[sys_num][var_num] = libmesh_make_unique<MeshFunction>(
              source_es, *_serialized_solution, source_sys.get_dof_map(), var_num);
        else
          _mesh_functions[sys_num][var_num]->clear();

        // Initialize the MeshFunctions for application to the oversampled solution
        _mesh_functions[sys_num][var_num]->init();
      }

      // Now loop over the nodes of the oversampled mesh setting values for each variable.
      for (const auto & node : as_range(_mesh_ptr->localNodesBegin(), _mesh_ptr->localNodesEnd()))
        for (unsigned int var_num = 0; var_num < _mesh_functions[sys_num].size(); ++var_num)
          if (node->n_dofs(sys_num, var_num))
            dest_sys.solution->set(node->dof_number(sys_num, var_num, 0),
                                   (*_mesh_functions[sys_num][var_num])(
                                       *node - _position)); // 0 value is for component

      dest_sys.solution->close();
    }
  }

  // Set this to false so that new output files are not created, since the oversampled mesh doesn't
  // actually change
  _oversample_mesh_changed = false;
}

Member Data Documentation

_advanced_execute_on

OutputOnWarehouse Output::_advanced_execute_on

protectedinherited

Storage for the individual component execute flags.

Definition at line 249 of file Output.h.

Referenced by Output::advancedExecuteOn(), AdvancedOutput::advancedExecuteOn(), AdvancedOutput::AdvancedOutput(), AdvancedOutput::hasOutput(), AdvancedOutput::hasOutputHelper(), Console::initialSetup(), AdvancedOutput::initialSetup(), AdvancedOutput::initPostprocessorOrVectorPostprocessorLists(), and AdvancedOutput::wantOutput().

_allow_output

bool Output::_allow_output

protectedinherited

Flag for disabling output.

Definition at line 240 of file Output.h.

Referenced by Output::allowOutput(), OversampleOutput::outputStep(), and Output::outputStep().

_app

MooseApp& MooseObject::_app

protectedinherited

The MooseApp this object is associated with.

Definition at line 171 of file MooseObject.h.

Referenced by GridPartitioner::_do_partition(), AB2PredictorCorrector::AB2PredictorCorrector(), Executioner::addAttributeReporter(), FEProblemBase::addMaterialHelper(), FEProblemBase::addMultiApp(), FEProblemBase::addOutput(), FEProblemBase::allowOutput(), AStableDirk4::AStableDirk4(), AlgebraicRelationshipManager::attachAlgebraicFunctorHelper(), RelationshipManager::attachRelationshipManagers(), ElementSideNeighborLayers::attachRelationshipManagersInternal(), ElementPointNeighbors::attachRelationshipManagersInternal(), FileMesh::buildMesh(), MeshGeneratorMesh::buildMesh(), FEProblemBase::checkNonlinearConvergence(), OversampleOutput::cloneMesh(), FEProblemBase::computeJacobianTags(), FEProblemBase::computeResidualTags(), Console::Console(), TimeStepper::constrainStep(), MultiApp::createApp(), DumpObjectsProblem::dumpObjectHelper(), DumpObjectsProblem::dumpVariableHelper(), EigenExecutionerBase::EigenExecutionerBase(), EigenKernel::EigenKernel(), NonlinearEigen::execute(), InversePowerMethod::execute(), Transient::execute(), Steady::execute(), FileOutput::FileOutput(), FEProblemBase::forceOutput(), MeshGenerator::getMesh(), MeshGenerator::getMeshByName(), MooseObject::getMooseApp(), InversePowerMethod::init(), NonlinearEigen::init(), Transient::init(), Steady::init(), MooseMesh::init(), NumPicardIterations::initialize(), TimePeriod::initialSetup(), Console::initialSetup(), MultiApp::initialSetup(), FEProblemBase::initialSetup(), AdvancedOutput::initOutputList(), FEProblemBase::initPetscOutput(), AdvancedOutput::initPostprocessorOrVectorPostprocessorLists(), InversePowerMethod::InversePowerMethod(), MooseObject::mooseError(), MooseMesh::MooseMesh(), NonlinearEigen::NonlinearEigen(), EigenExecutionerBase::normalizeSolution(), PerfGraphOutput::output(), Tecplot::output(), Exodus::output(), Nemesis::output(), ControlOutput::outputActiveObjects(), ControlOutput::outputChangedControls(), ControlOutput::outputControls(), Exodus::outputEmptyTimestep(), Console::outputInput(), Exodus::outputInput(), Exodus::outputNodalVariables(), OversampleOutput::outputStep(), Output::outputStep(), FEProblemBase::outputStep(), Console::outputSystemInformation(), MultiApp::parentOutputPositionChanged(), PerformanceData::PerformanceData(), PetscOutput::petscLinearOutput(), PetscOutput::petscNonlinearOutput(), FEProblemBase::projectSolution(), FEProblemBase::setRestartFile(), TransientMultiApp::setupApp(), TimeSequenceStepperBase::setupSequence(), Transient::setupTimeIntegrator(), TransientMultiApp::solveStep(), FEProblemBase::subdomainSetup(), FEProblemBase::theWarehouse(), TimeExtremeValue::TimeExtremeValue(), TimePeriod::TimePeriod(), FEProblemBase::timestepSetup(), Transient::Transient(), and Console::write().

_binary

bool XDA::_binary

private

Flag for binary output.

Definition at line 48 of file XDA.h.

Referenced by filename(), and output().

_change_position

bool OversampleOutput::_change_position

protectedinherited

Flag for re-positioning.

Definition at line 83 of file OversampleOutput.h.

Referenced by OversampleOutput::initOversample(), Exodus::outputSetup(), and OversampleOutput::updateOversample().

_console

const ConsoleStream ConsoleStreamInterface::_console

inherited

An instance of helper class to write streams to the Console objects.

Definition at line 32 of file ConsoleStreamInterface.h.

Referenced by IterationAdaptiveDT::acceptStep(), SetupRecoverFileBaseAction::act(), Adaptivity::adaptMesh(), FEProblemBase::adaptMesh(), SimplePredictor::apply(), FEProblemBase::backupMultiApps(), FEProblemBase::checkProblemIntegrity(), IterationAdaptiveDT::computeAdaptiveDT(), Transient::computeConstrainedDT(), NonlinearSystemBase::computeDamping(), IterationAdaptiveDT::computeDT(), IterationAdaptiveDT::computeFailedDT(), IterationAdaptiveDT::computeInterpolationDT(), FEProblemBase::computeResidualTags(), IterationAdaptiveDT::constrainStep(), TimeStepper::constrainStep(), AB2PredictorCorrector::converged(), FEProblemBase::execMultiApps(), FEProblemBase::execMultiAppTransfers(), MultiAppPostprocessorTransfer::execute(), MultiAppPostprocessorInterpolationTransfer::execute(), MultiAppVariableValueSamplePostprocessorTransfer::execute(), MultiAppNearestNodeTransfer::execute(), MultiAppPostprocessorToAuxScalarTransfer::execute(), MultiAppScalarToAuxScalarTransfer::execute(), MultiAppVariableValueSampleTransfer::execute(), MultiAppInterpolationTransfer::execute(), MultiAppMeshFunctionTransfer::execute(), MultiAppUserObjectTransfer::execute(), MultiAppProjectionTransfer::execute(), MultiAppVectorPostprocessorTransfer::execute(), MultiAppCopyTransfer::execute(), Steady::execute(), MultiAppDTKUserObjectTransfer::execute(), ActionWarehouse::executeActionsWithAction(), ActionWarehouse::executeAllActions(), FEProblemBase::FEProblemBase(), ElementQualityChecker::finalize(), FEProblemBase::finishMultiAppStep(), MultiApp::globalAppToLocal(), InversePowerMethod::init(), NonlinearEigen::init(), Steady::init(), FEProblemBase::initialAdaptMesh(), FEProblemBase::initialSetup(), EigenExecutionerBase::inversePowerIteration(), Transient::keepGoing(), IterationAdaptiveDT::limitDTByFunction(), IterationAdaptiveDT::limitDTToPostprocessorValue(), EigenExecutionerBase::makeBXConsistent(), Console::meshChanged(), MooseObject::mooseDeprecated(), MooseObject::mooseInfo(), MooseObject::mooseWarning(), PerfGraphOutput::output(), DOFMapOutput::output(), VariableResidualNormsDebugOutput::output(), Console::output(), ControlOutput::outputActiveObjects(), ControlOutput::outputChangedControls(), ControlOutput::outputControls(), Console::outputInput(), Console::outputPostprocessors(), Console::outputScalarVariables(), Console::outputSystemInformation(), FEProblemBase::possiblyRebuildGeomSearchPatches(), EigenExecutionerBase::postExecute(), ActionWarehouse::printActionDependencySets(), EigenExecutionerBase::printEigenvalue(), MaterialPropertyDebugOutput::printMaterialMap(), SolutionTimeAdaptiveDT::rejectStep(), DT2::rejectStep(), FEProblemBase::restoreMultiApps(), SimplePredictor::shouldApply(), NonlinearSystem::solve(), LStableDirk2::solve(), LStableDirk3::solve(), ImplicitMidpoint::solve(), ExplicitTVDRK2::solve(), LStableDirk4::solve(), AStableDirk4::solve(), ExplicitRK2::solve(), TransientMultiApp::solveStep(), Transient::solveStep(), DT2::step(), AB2PredictorCorrector::step(), NonlinearEigen::takeStep(), Console::writeTimestepInformation(), Console::writeVariableNorms(), and FEProblemBase::~FEProblemBase().

_current_execute_flag

const ExecFlagType& SetupInterface::_current_execute_flag

protectedinherited

Reference to FEProblemBase.

Definition at line 98 of file SetupInterface.h.

_dt

Real& Output::_dt

protectedinherited

Time step delta.

Definition at line 204 of file Output.h.

Referenced by Output::dt(), and PetscOutput::solveSetup().

_dt_old

Real& Output::_dt_old

protectedinherited

Old time step delta.

Definition at line 207 of file Output.h.

Referenced by Output::dtOld(), and Console::writeTimestepInformation().

_elemental_as_nodal

bool AdvancedOutput::_elemental_as_nodal

protectedinherited

Flags to control nodal output.

Definition at line 260 of file AdvancedOutput.h.

Referenced by AdvancedOutput::AdvancedOutput(), Exodus::Exodus(), and AdvancedOutput::initialSetup().

_enabled

const bool& MooseObject::_enabled

protectedinherited

Reference to the "enable" InputParaemters, used by Controls for toggling on/off MooseObjects.

Definition at line 180 of file MooseObject.h.

Referenced by MooseObject::enabled().

_end_step

int Output::_end_step

protectedinherited

End outputting at this time step.

Definition at line 228 of file Output.h.

Referenced by Output::onInterval().

_end_time

Real Output::_end_time

protectedinherited

End outputting time.

Definition at line 222 of file Output.h.

_es_ptr

EquationSystems* Output::_es_ptr

protectedinherited

Reference the the libMesh::EquationSystems object that contains the data.

Definition at line 183 of file Output.h.

Referenced by AdvancedOutput::initAvailableLists(), OversampleOutput::initOversample(), AdvancedOutput::initShowHideLists(), GMVOutput::output(), Tecplot::output(), VTKOutput::output(), output(), Output::Output(), Nemesis::output(), Checkpoint::output(), Exodus::outputElementalVariables(), Exodus::outputEmptyTimestep(), Exodus::outputNodalVariables(), and Exodus::outputSetup().

_exec_flags

const std::vector<ExecFlagType> SetupInterface::_exec_flags

protectedinherited

(DEPRECATED) execution flag (when is the object executed/evaluated) TODO: ExecFlagType

Definition at line 95 of file SetupInterface.h.

Referenced by SetupInterface::execBitFlags(), MultiAppTransfer::execFlags(), and SetupInterface::execFlags().

_execute_enum

const ExecFlagEnum& SetupInterface::_execute_enum

protectedinherited

Execute settings for this oejct.

Definition at line 92 of file SetupInterface.h.

Referenced by ChangeOverTimePostprocessor::ChangeOverTimePostprocessor(), and SetupInterface::getExecuteOnEnum().

_execute_on

ExecFlagEnum Output::_execute_on

protectedinherited

The common Execution types; this is used as the default execution type for everything except system information and input.

Definition at line 192 of file Output.h.

Referenced by AdvancedOutput::AdvancedOutput(), Console::Console(), Output::executeOn(), AdvancedOutput::initExecutionTypes(), Console::initialSetup(), Console::output(), Output::Output(), PetscOutput::PetscOutput(), Output::shouldOutput(), and PetscOutput::solveSetup().

_file_base

std::string FileOutput::_file_base

protectedinherited

The base filename from the input paramaters.

Definition at line 82 of file FileOutput.h.

Referenced by FileOutput::checkFilename(), Checkpoint::directory(), DOFMapOutput::filename(), FileOutput::filename(), VTKOutput::filename(), Tecplot::filename(), filename(), GMVOutput::filename(), Gnuplot::filename(), SolutionHistory::filename(), CSV::filename(), Console::filename(), Nemesis::filename(), Exodus::filename(), FileOutput::FileOutput(), CSV::getVectorPostprocessorFileName(), CSV::output(), and OversampleOutput::OversampleOutput().

_file_num

unsigned int& FileOutput::_file_num

protectedinherited

A file number counter, initialized to 0 (this must be controlled by the child class, see Exodus)

Definition at line 85 of file FileOutput.h.

Referenced by DOFMapOutput::filename(), VTKOutput::filename(), Tecplot::filename(), GMVOutput::filename(), filename(), Exodus::filename(), FileOutput::FileOutput(), FileOutput::getFileNumber(), GMVOutput::output(), Tecplot::output(), output(), VTKOutput::output(), Gnuplot::output(), Exodus::outputSetup(), FileOutput::setFileNumber(), and DOFMapOutput::writeStreamToFile().

_initialized

bool Output::_initialized

protectedinherited

True if init() has been called.

Definition at line 237 of file Output.h.

Referenced by AdvancedOutput::hasOutputHelper(), Output::initialSetup(), AdvancedOutput::initialSetup(), and Console::output().

_interval

const unsigned int Output::_interval

protectedinherited

The output time step interval.

Definition at line 213 of file Output.h.

Referenced by Output::onInterval().

_is_advanced

bool Output::_is_advanced

protectedinherited

Flag for advanced output testing.

Definition at line 243 of file Output.h.

Referenced by AdvancedOutput::AdvancedOutput(), and Output::isAdvanced().

_linear_iter

PetscInt PetscOutput::_linear_iter

protectedinherited

Current linear iteration returned from PETSc.

Definition at line 52 of file PetscOutput.h.

Referenced by Console::output(), and PetscOutput::petscLinearOutput().

_mci_feproblem

FEProblemBase& MeshChangedInterface::_mci_feproblem

protectedinherited

Reference to FEProblemBase instance.

Definition at line 42 of file MeshChangedInterface.h.

Referenced by MeshChangedInterface::MeshChangedInterface().

_mesh_ptr

MooseMesh* Output::_mesh_ptr

protectedinherited

A convenience pointer to the current mesh (reference or displaced depending on "use_displaced")

Definition at line 186 of file Output.h.

Referenced by OversampleOutput::cloneMesh(), OversampleOutput::initOversample(), Tecplot::output(), output(), Output::Output(), and OversampleOutput::updateOversample().

_name

const std::string& MooseObject::_name

protectedinherited

The name of this object, reference to value stored in InputParameters.

Definition at line 177 of file MooseObject.h.

Referenced by DerivativeParsedMaterialHelper::assembleDerivatives(), Piecewise::buildFromFile(), Piecewise::buildFromXandY(), Piecewise::buildFromXY(), CentroidMultiApp::fillPositions(), MultiApp::fillPositions(), FunctionDT::FunctionDT(), PiecewiseBase::initialSetup(), MooseObject::name(), PiecewiseBilinear::parse(), Piecewise::Piecewise(), PiecewiseBilinear::PiecewiseBilinear(), PiecewiseLinearInterpolationMaterial::PiecewiseLinearInterpolationMaterial(), PiecewiseBase::setData(), Split::setup(), and VectorPostprocessorFunction::VectorPostprocessorFunction().

_nonlinear_iter

PetscInt PetscOutput::_nonlinear_iter

protectedinherited

Current non-linear iteration returned from PETSc.

Definition at line 49 of file PetscOutput.h.

Referenced by Console::output(), and PetscOutput::petscNonlinearOutput().

_norm

Real PetscOutput::_norm

protectedinherited

Current norm returned from PETSc.

Definition at line 46 of file PetscOutput.h.

Referenced by Console::output(), PetscOutput::petscLinearOutput(), and PetscOutput::petscNonlinearOutput().

_num

unsigned int Output::_num

protectedinherited

The number of outputs written.

Definition at line 210 of file Output.h.

_output_if_base_contains

std::vector<std::string> FileOutput::_output_if_base_contains

protectedinherited

Storage for 'output_if_base_contains'.

Definition at line 91 of file FileOutput.h.

Referenced by FileOutput::checkFilename().

_output_step_timer

PerfID Output::_output_step_timer

protectedinherited

Timers.

Definition at line 252 of file Output.h.

Referenced by OversampleOutput::outputStep(), and Output::outputStep().

_oversample

bool OversampleOutput::_oversample

protectedinherited

Flag indicating that oversampling is enabled.

Definition at line 80 of file OversampleOutput.h.

Referenced by OversampleOutput::initOversample(), Exodus::outputSetup(), and OversampleOutput::updateOversample().

_padding

unsigned int FileOutput::_padding

protectedinherited

Number of digits to pad the extensions.

Definition at line 88 of file FileOutput.h.

Referenced by VTKOutput::filename(), filename(), GMVOutput::filename(), Tecplot::filename(), Checkpoint::filename(), Nemesis::filename(), Exodus::filename(), and CSV::getVectorPostprocessorFileName().

_pars

const InputParameters& MooseObject::_pars

protectedinherited

Parameters of this object, references the InputParameters stored in the InputParametersWarehouse.

Definition at line 168 of file MooseObject.h.

Referenced by GridPartitioner::_do_partition(), BreakMeshByBlockGeneratorBase::BreakMeshByBlockGeneratorBase(), BreakMeshByBlockBase::checkInputParameter(), PetscExternalPartitioner::clone(), GridPartitioner::clone(), Console::Console(), Eigenvalue::Eigenvalue(), PerflogDumper::execute(), Eigenvalue::execute(), Executioner::Executioner(), FunctionMaterialBase::FunctionMaterialBase(), ParsedMaterialHelper::functionParse(), ExtraNodesetGenerator::generate(), MooseObject::getParam(), GeneralUserObject::getPostprocessorValue(), AuxKernel::getPostprocessorValue(), AuxKernel::getScatterVectorPostprocessorValue(), AuxKernel::getUserObject(), InitialConditionBase::getUserObject(), InitialConditionBase::getUserObjectBase(), AuxKernel::getUserObjectBase(), GeneralUserObject::getVectorPostprocessorValue(), AuxKernel::getVectorPostprocessorValue(), Transient::init(), AdvancedOutput::initExecutionTypes(), Console::initialSetup(), MooseObject::isParamValid(), AddExtraNodeset::modify(), MooseObject::paramError(), MooseObject::parameters(), MooseObject::paramInfo(), MooseObject::paramWarning(), and Transient::setupTimeIntegrator().

_perf_graph

PerfGraph& PerfGraphInterface::_perf_graph

protectedinherited

The performance graph to add to.

Definition at line 66 of file PerfGraphInterface.h.

Referenced by PerfGraphData::getValue(), and PerfGraphInterface::registerTimedSection().

_pg_params

const InputParameters* PerfGraphInterface::_pg_params

protectedinherited

Params.

Definition at line 63 of file PerfGraphInterface.h.

_prefix

std::string PerfGraphInterface::_prefix

protectedinherited

A prefix to use for all sections.

Definition at line 69 of file PerfGraphInterface.h.

Referenced by PerfGraphInterface::registerTimedSection().

_problem_ptr

FEProblemBase* Output::_problem_ptr

protectedinherited

Pointer the the FEProblemBase object for output object (use this)

Definition at line 174 of file Output.h.

Referenced by AdvancedOutput::initAvailableLists(), Console::initialSetup(), OversampleOutput::initOversample(), AdvancedOutput::initPostprocessorOrVectorPostprocessorLists(), AdvancedOutput::initShowHideLists(), Nemesis::meshChanged(), Console::meshChanged(), DOFMapOutput::output(), VariableResidualNormsDebugOutput::output(), SolutionHistory::output(), CSV::output(), Output::Output(), TopResidualDebugOutput::output(), TableOutput::outputPostprocessors(), Nemesis::outputPostprocessors(), Exodus::outputPostprocessors(), TableOutput::outputScalarVariables(), Nemesis::outputScalarVariables(), Exodus::outputScalarVariables(), Console::outputSystemInformation(), TableOutput::outputVectorPostprocessors(), MaterialPropertyDebugOutput::printMaterialMap(), TopResidualDebugOutput::printTopResiduals(), PetscOutput::solveSetup(), OversampleOutput::updateOversample(), and Console::writeVariableNorms().

_refinements

const unsigned int OversampleOutput::_refinements

protectedinherited

The number of oversampling refinements.

Definition at line 77 of file OversampleOutput.h.

Referenced by OversampleOutput::initOversample().

_scalar_as_nodal

bool AdvancedOutput::_scalar_as_nodal

protectedinherited

Definition at line 260 of file AdvancedOutput.h.

Referenced by AdvancedOutput::AdvancedOutput(), and AdvancedOutput::initialSetup().

_sequence

bool Output::_sequence

protectedinherited

Flag for forcing call to outputSetup() with every call to output() (restartable)

Definition at line 189 of file Output.h.

_start_step

int Output::_start_step

protectedinherited

Start outputting at this time step.

Definition at line 225 of file Output.h.

Referenced by Output::onInterval().

_start_time

Real Output::_start_time

protectedinherited

Start outputting time.

Definition at line 219 of file Output.h.

Referenced by Output::onInterval().

_sync_only

bool Output::_sync_only

protectedinherited

Flag for only executing at sync times.

Definition at line 234 of file Output.h.

Referenced by Output::onInterval().

_sync_times

std::set<Real> Output::_sync_times

protectedinherited

Sync times for this outputter.

Definition at line 216 of file Output.h.

Referenced by Output::onInterval().

_t_step

int& Output::_t_step

protectedinherited

The current time step.

Definition at line 201 of file Output.h.

Referenced by Output::onInterval(), Console::output(), TableOutput::outputVectorPostprocessors(), Output::time(), Output::timeOld(), and Output::timeStep().

_t_tol

Real Output::_t_tol

protectedinherited

Time checking tolerance.

Definition at line 231 of file Output.h.

Referenced by PetscOutput::solveSetup().

_time

Real& Output::_time

protectedinherited

The current time for output purposes.

Definition at line 195 of file Output.h.

Referenced by Output::onInterval(), AdvancedOutput::output(), TableOutput::outputVectorPostprocessors(), PetscOutput::solveSetup(), Output::time(), and AdvancedOutput::wantOutput().

_time_old

Real& Output::_time_old

protectedinherited

The old time.

Definition at line 198 of file Output.h.

Referenced by PetscOutput::solveSetup(), and Output::timeOld().

_transient

bool Output::_transient

protectedinherited

Transient flag (true = transient)

Definition at line 177 of file Output.h.

Referenced by Output::dt(), Output::dtOld(), Output::time(), Output::timeOld(), and Console::writeTimestepInformation().

_type

const std::string& MooseObject::_type

protectedinherited

The type of this object (the Class name)

Definition at line 174 of file MooseObject.h.

Referenced by FEProblemBase::init(), and MooseObject::type().

_use_displaced

bool Output::_use_displaced

protectedinherited

Flag for using displaced mesh.

Definition at line 180 of file Output.h.

Referenced by Output::Output().

---

The documentation for this class was generated from the following files:

• include/outputs/XDA.h
• src/outputs/XDA.C