libMesh
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This class provides a nice interface to the Laspack C-based data structures for serial vectors. More...
#include <laspack_matrix.h>
Public Member Functions | |
LaspackVector (const Parallel::Communicator &comm, const ParallelType=AUTOMATIC) | |
Dummy-Constructor. More... | |
LaspackVector (const Parallel::Communicator &comm, const numeric_index_type n, const ParallelType=AUTOMATIC) | |
Constructor. More... | |
LaspackVector (const Parallel::Communicator &comm, const numeric_index_type n, const numeric_index_type n_local, const ParallelType=AUTOMATIC) | |
Constructor. More... | |
LaspackVector (const Parallel::Communicator &comm, const numeric_index_type N, const numeric_index_type n_local, const std::vector< numeric_index_type > &ghost, const ParallelType=AUTOMATIC) | |
Constructor. More... | |
LaspackVector< T > & | operator= (const LaspackVector< T > &v) |
Copy assignment operator. More... | |
LaspackVector (LaspackVector &&)=delete | |
This class manages a C-style struct (QVector) manually, so we don't want to allow any automatic copy/move functions to be generated, and we can't default the destructor. More... | |
LaspackVector (const LaspackVector &)=delete | |
LaspackVector & | operator= (LaspackVector &&)=delete |
virtual | ~LaspackVector () |
virtual void | close () override |
Calls the NumericVector's internal assembly routines, ensuring that the values are consistent across processors. More... | |
virtual void | clear () override |
Restores the NumericVector<T> to a pristine state. More... | |
virtual void | zero () override |
Set all entries to zero. More... | |
virtual std::unique_ptr< NumericVector< T > > | zero_clone () const override |
virtual std::unique_ptr< NumericVector< T > > | clone () const override |
virtual void | init (const numeric_index_type N, const numeric_index_type n_local, const bool fast=false, const ParallelType ptype=AUTOMATIC) override |
Change the dimension of the vector to n . More... | |
virtual void | init (const numeric_index_type N, const bool fast=false, const ParallelType ptype=AUTOMATIC) override |
Call init() with n_local = N. More... | |
virtual void | init (const numeric_index_type N, const numeric_index_type n_local, const std::vector< numeric_index_type > &ghost, const bool fast=false, const ParallelType=AUTOMATIC) override |
Create a vector that holds the local indices plus those specified in the ghost argument. More... | |
virtual void | init (const NumericVector< T > &other, const bool fast=false) override |
Creates a vector that has the same dimension and storage type as other , including ghost dofs. More... | |
virtual NumericVector< T > & | operator= (const T s) override |
Sets all entries of the vector to the value s . More... | |
virtual NumericVector< T > & | operator= (const NumericVector< T > &v) override |
This looks like a copy assignment operator, but note that, unlike normal copy assignment operators, it is pure virtual. More... | |
virtual NumericVector< T > & | operator= (const std::vector< T > &v) override |
Sets (*this)(i) = v(i) for each entry of the vector. More... | |
virtual Real | min () const override |
virtual Real | max () const override |
virtual T | sum () const override |
virtual Real | l1_norm () const override |
virtual Real | l2_norm () const override |
virtual Real | linfty_norm () const override |
virtual numeric_index_type | size () const override |
virtual numeric_index_type | local_size () const override |
virtual numeric_index_type | first_local_index () const override |
virtual numeric_index_type | last_local_index () const override |
virtual T | operator() (const numeric_index_type i) const override |
virtual NumericVector< T > & | operator+= (const NumericVector< T > &v) override |
Adds v to *this, \( \vec{u} \leftarrow \vec{u} + \vec{v} \). More... | |
virtual NumericVector< T > & | operator-= (const NumericVector< T > &v) override |
Subtracts v from *this, \( \vec{u} \leftarrow \vec{u} - \vec{v} \). More... | |
virtual NumericVector< T > & | operator*= (const NumericVector< T > &v) override |
Computes the component-wise multiplication of this vector's entries by another's, \( u_i \leftarrow u_i v_i \, \forall i\). More... | |
virtual NumericVector< T > & | operator/= (const NumericVector< T > &v) override |
Computes the component-wise division of this vector's entries by another's, \( u_i \leftarrow \frac{u_i}{v_i} \, \forall i\). More... | |
virtual void | reciprocal () override |
Computes the component-wise reciprocal, \( u_i \leftarrow \frac{1}{u_i} \, \forall i\). More... | |
virtual void | conjugate () override |
Negates the imaginary component of each entry in the vector. More... | |
virtual void | set (const numeric_index_type i, const T value) override |
Sets v(i) = value . More... | |
virtual void | add (const numeric_index_type i, const T value) override |
Adds value to the vector entry specified by i . More... | |
virtual void | add (const T s) override |
Adds s to each entry of the vector, \( u_i \leftarrow u_i + s \). More... | |
virtual void | add (const NumericVector< T > &v) override |
Adds v to this , \( \vec{u} \leftarrow \vec{u} + \vec{v} \). More... | |
virtual void | add (const T a, const NumericVector< T > &v) override |
Vector addition with a scalar multiple, \( \vec{u} \leftarrow \vec{u} + a\vec{v} \). More... | |
virtual void | add_vector (const NumericVector< T > &v, const SparseMatrix< T > &A) override |
Computes \( \vec{u} \leftarrow \vec{u} + A \vec{v} \), i.e. More... | |
virtual void | add_vector_transpose (const NumericVector< T > &v, const SparseMatrix< T > &A) override |
Computes \( \vec{u} \leftarrow \vec{u} + A^T \vec{v} \), i.e. More... | |
virtual void | scale (const T factor) override |
Scale each element of the vector by the given factor . More... | |
virtual void | abs () override |
Sets \( u_i \leftarrow |u_i| \) for each entry in the vector. More... | |
virtual T | dot (const NumericVector< T > &v) const override |
virtual void | localize (std::vector< T > &v_local) const override |
Creates a copy of the global vector in the local vector v_local . More... | |
virtual void | localize (NumericVector< T > &v_local) const override |
Same, but fills a NumericVector<T> instead of a std::vector . More... | |
virtual void | localize (NumericVector< T > &v_local, const std::vector< numeric_index_type > &send_list) const override |
Creates a local vector v_local containing only information relevant to this processor, as defined by the send_list . More... | |
virtual void | localize (std::vector< T > &v_local, const std::vector< numeric_index_type > &indices) const override |
Fill in the local std::vector "v_local" with the global indices given in "indices". More... | |
virtual void | localize (const numeric_index_type first_local_idx, const numeric_index_type last_local_idx, const std::vector< numeric_index_type > &send_list) override |
Updates a local vector with selected values from neighboring processors, as defined by send_list . More... | |
virtual void | localize_to_one (std::vector< T > &v_local, const processor_id_type proc_id=0) const override |
Creates a local copy of the global vector in v_local only on processor proc_id . More... | |
virtual void | pointwise_mult (const NumericVector< T > &vec1, const NumericVector< T > &vec2) override |
Computes \( u_i \leftarrow u_i v_i \) (summation not implied) i.e. More... | |
virtual void | pointwise_divide (const NumericVector< T > &vec1, const NumericVector< T > &vec2) override |
Computes \( u_i \leftarrow \frac{v_{1,i}}{v_{2,i}} \) (summation not implied) i.e. More... | |
virtual void | swap (NumericVector< T > &v) override |
Swaps the contents of this with v . More... | |
virtual std::size_t | max_allowed_id () const override |
virtual bool | initialized () const |
ParallelType | type () const |
ParallelType & | type () |
virtual bool | closed () const |
virtual Real | subset_l1_norm (const std::set< numeric_index_type > &indices) const |
virtual Real | subset_l2_norm (const std::set< numeric_index_type > &indices) const |
virtual Real | subset_linfty_norm (const std::set< numeric_index_type > &indices) const |
Real | l2_norm_diff (const NumericVector< T > &other_vec) const |
virtual T | el (const numeric_index_type i) const |
virtual void | get (const std::vector< numeric_index_type > &index, T *values) const |
Access multiple components at once. More... | |
void | get (const std::vector< numeric_index_type > &index, std::vector< T > &values) const |
Access multiple components at once. More... | |
NumericVector< T > & | operator*= (const T a) |
Scales the vector by a , \( \vec{u} \leftarrow a\vec{u} \). More... | |
NumericVector< T > & | operator/= (const T a) |
Scales the vector by 1/a , \( \vec{u} \leftarrow \frac{1}{a}\vec{u} \). More... | |
virtual void | add_vector (const T *v, const std::vector< numeric_index_type > &dof_indices) |
Computes \( \vec{u} \leftarrow \vec{u} + \vec{v} \), where v is a pointer and each dof_indices [i] specifies where to add value v [i]. More... | |
void | add_vector (const std::vector< T > &v, const std::vector< numeric_index_type > &dof_indices) |
Computes \( \vec{u} \leftarrow \vec{u} + \vec{v} \), where v is a std::vector and each dof_indices [i] specifies where to add value v [i]. More... | |
void | add_vector (const NumericVector< T > &v, const std::vector< numeric_index_type > &dof_indices) |
Computes \( \vec{u} \leftarrow \vec{u} + \vec{v} \), where v is a NumericVector and each dof_indices [i] specifies where to add value v(i) . More... | |
void | add_vector (const DenseVector< T > &v, const std::vector< numeric_index_type > &dof_indices) |
Computes \( \vec{u} \leftarrow \vec{u} + \vec{v} \), where v is a DenseVector and each dof_indices [i] specifies where to add value v(i) . More... | |
void | add_vector (const NumericVector< T > &v, const ShellMatrix< T > &A) |
Computes \( \vec{u} \leftarrow \vec{u} + A \vec{v} \), i.e. More... | |
virtual void | insert (const T *v, const std::vector< numeric_index_type > &dof_indices) |
Inserts the entries of v in *this at the locations specified by v . More... | |
void | insert (const std::vector< T > &v, const std::vector< numeric_index_type > &dof_indices) |
Inserts the entries of v in *this at the locations specified by v . More... | |
void | insert (const NumericVector< T > &v, const std::vector< numeric_index_type > &dof_indices) |
Inserts the entries of v in *this at the locations specified by v . More... | |
void | insert (const DenseVector< T > &v, const std::vector< numeric_index_type > &dof_indices) |
Inserts the entries of v in *this at the locations specified by v . More... | |
void | insert (const DenseSubVector< T > &v, const std::vector< numeric_index_type > &dof_indices) |
Inserts the entries of v in *this at the locations specified by v . More... | |
virtual int | compare (const NumericVector< T > &other_vector, const Real threshold=TOLERANCE) const |
virtual int | local_relative_compare (const NumericVector< T > &other_vector, const Real threshold=TOLERANCE) const |
virtual int | global_relative_compare (const NumericVector< T > &other_vector, const Real threshold=TOLERANCE) const |
virtual void | print (std::ostream &os=libMesh::out) const |
Prints the local contents of the vector, by default to libMesh::out. More... | |
template<> | |
void | print (std::ostream &os) const |
virtual void | print_global (std::ostream &os=libMesh::out) const |
Prints the global contents of the vector, by default to libMesh::out. More... | |
template<> | |
void | print_global (std::ostream &os) const |
virtual void | print_matlab (const std::string &="") const |
Print the contents of the vector in Matlab's sparse matrix format. More... | |
virtual void | create_subvector (NumericVector< T > &, const std::vector< numeric_index_type > &) const |
Fills in subvector from this vector using the indices in rows . More... | |
bool | readable () const |
bool | compatible (const NumericVector< T > &v) const |
const Parallel::Communicator & | comm () const |
processor_id_type | n_processors () const |
processor_id_type | processor_id () const |
Static Public Member Functions | |
static std::unique_ptr< NumericVector< T > > | build (const Parallel::Communicator &comm, const SolverPackage solver_package=libMesh::default_solver_package()) |
Builds a NumericVector on the processors in communicator comm using the linear solver package specified by solver_package . More... | |
static std::string | get_info () |
Gets a string containing the reference information. More... | |
static void | print_info (std::ostream &out_stream=libMesh::out) |
Prints the reference information, by default to libMesh::out . More... | |
static unsigned int | n_objects () |
Prints the number of outstanding (created, but not yet destroyed) objects. More... | |
static void | enable_print_counter_info () |
Methods to enable/disable the reference counter output from print_info() More... | |
static void | disable_print_counter_info () |
Protected Types | |
typedef std::map< std::string, std::pair< unsigned int, unsigned int > > | Counts |
Data structure to log the information. More... | |
Protected Member Functions | |
void | increment_constructor_count (const std::string &name) noexcept |
Increments the construction counter. More... | |
void | increment_destructor_count (const std::string &name) noexcept |
Increments the destruction counter. More... | |
Protected Attributes | |
bool | _is_closed |
Flag which tracks whether the vector's values are consistent on all processors after insertion or addition of values has occurred on some or all processors. More... | |
bool | _is_initialized |
true once init() has been called. More... | |
ParallelType | _type |
Type of vector. More... | |
std::mutex | _numeric_vector_mutex |
Mutex for performing thread-safe operations. More... | |
const Parallel::Communicator & | _communicator |
Static Protected Attributes | |
static Counts | _counts |
Actually holds the data. More... | |
static Threads::atomic< unsigned int > | _n_objects |
The number of objects. More... | |
static Threads::spin_mutex | _mutex |
Mutual exclusion object to enable thread-safe reference counting. More... | |
static bool | _enable_print_counter = true |
Flag to control whether reference count information is printed when print_info is called. More... | |
Private Attributes | |
QVector | _vec |
Actual Laspack vector datatype to hold vector entries. More... | |
Friends | |
class | LaspackLinearSolver< T > |
Make other Laspack datatypes friends. More... | |
This class provides a nice interface to the Laspack C-based data structures for serial vectors.
All overridden virtual functions are documented in numeric_vector.h.
Definition at line 42 of file laspack_matrix.h.
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protectedinherited |
Data structure to log the information.
The log is identified by the class name.
Definition at line 119 of file reference_counter.h.
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inlineexplicit |
Dummy-Constructor.
Dimension=0
Definition at line 256 of file laspack_vector.h.
References libMesh::NumericVector< T >::_type.
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inlineexplicit |
Constructor.
Set dimension to n
and initialize all elements with zero.
Definition at line 267 of file laspack_vector.h.
References libMesh::LaspackVector< T >::init().
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inline |
Constructor.
Set local dimension to n_local
, the global dimension to n
, and initialize all elements with zero.
Definition at line 279 of file laspack_vector.h.
References libMesh::LaspackVector< T >::init().
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inline |
Constructor.
Set local dimension to n_local
, the global dimension to n
, but additionally reserve memory for the indices specified by the ghost
argument.
Definition at line 292 of file laspack_vector.h.
References libMesh::LaspackVector< T >::init().
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delete |
This class manages a C-style struct (QVector) manually, so we don't want to allow any automatic copy/move functions to be generated, and we can't default the destructor.
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delete |
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inlinevirtual |
Definition at line 306 of file laspack_vector.h.
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overridevirtual |
Sets \( u_i \leftarrow |u_i| \) for each entry in the vector.
Implements libMesh::NumericVector< T >.
Definition at line 298 of file laspack_vector.C.
References std::abs(), libMesh::initialized(), and libMesh::libmesh_assert().
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inlineoverridevirtual |
Adds value
to the vector entry specified by i
.
Note that library implementations of this method are thread safe, e.g. we will lock _numeric_vector_mutex
before writing to the vector
Implements libMesh::NumericVector< T >.
Definition at line 519 of file laspack_vector.h.
References libMesh::initialized(), libMesh::libmesh_assert(), and value.
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overridevirtual |
Adds s
to each entry of the vector, \( u_i \leftarrow u_i + s \).
Implements libMesh::NumericVector< T >.
Definition at line 211 of file laspack_vector.C.
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overridevirtual |
Adds v
to this
, \( \vec{u} \leftarrow \vec{u} + \vec{v} \).
Equivalent to calling operator+=()
.
Implements libMesh::NumericVector< T >.
Definition at line 233 of file laspack_vector.C.
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overridevirtual |
Vector addition with a scalar multiple, \( \vec{u} \leftarrow \vec{u} + a\vec{v} \).
Equivalent to calling operator+=()
.
Implements libMesh::NumericVector< T >.
Definition at line 241 of file laspack_vector.C.
References libMesh::libmesh_assert(), libMesh::make_range(), and libMesh::LaspackVector< T >::size().
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overridevirtual |
Computes \( \vec{u} \leftarrow \vec{u} + A \vec{v} \), i.e.
adds the product of a SparseMatrix
A
and a NumericVector
v
to this
.
Implements libMesh::NumericVector< T >.
Definition at line 264 of file laspack_vector.C.
References libMesh::LaspackVector< T >::_vec, and libMesh::libmesh_assert().
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virtualinherited |
Computes \( \vec{u} \leftarrow \vec{u} + \vec{v} \), where v
is a pointer and each dof_indices
[i] specifies where to add value v
[i].
This should be overridden in subclasses for efficiency. Note that library implementations of this method are thread safe
Reimplemented in libMesh::PetscVector< T >, and libMesh::EpetraVector< T >.
Definition at line 379 of file numeric_vector.C.
Referenced by libMesh::RBConstruction::add_scaled_matrix_and_vector(), assemble(), LinearElasticity::assemble(), HDGProblem::assemble(), assemble_1D(), AssembleOptimization::assemble_A_and_F(), assemble_biharmonic(), assemble_divgrad(), assemble_elasticity(), assemble_ellipticdg(), assemble_func(), assemble_laplace(), assemble_matrix_and_rhs(), assemble_poisson(), assemble_shell(), assemble_stokes(), assemble_wave(), libMesh::LinearImplicitSystem::assembly(), assembly_with_dg_fem_context(), compute_residual(), periodic_bc_test_poisson(), LaplaceYoung::residual(), LargeDeformationElasticity::residual(), Biharmonic::JR::residual_and_jacobian(), LinearElasticityWithContact::residual_and_jacobian(), libMesh::NewmarkSystem::update_rhs(), and libMesh::SparseMatrix< ValOut >::vector_mult_add().
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inlineinherited |
Computes \( \vec{u} \leftarrow \vec{u} + \vec{v} \), where v
is a std::vector and each dof_indices
[i] specifies where to add value v
[i].
This method is guaranteed to be thread safe as long as library implementations of NumericVector
are used
Definition at line 898 of file numeric_vector.h.
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inherited |
Computes \( \vec{u} \leftarrow \vec{u} + \vec{v} \), where v
is a NumericVector and each dof_indices
[i] specifies where to add value v(i)
.
This method is guaranteed to be thread-safe as long as library implementations of NumericVector
are used
Definition at line 391 of file numeric_vector.C.
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inlineinherited |
Computes \( \vec{u} \leftarrow \vec{u} + \vec{v} \), where v
is a DenseVector and each dof_indices
[i] specifies where to add value v(i)
.
This method is guaranteed to be thread safe as long as library implementations of NumericVector
are used
Definition at line 910 of file numeric_vector.h.
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inherited |
Computes \( \vec{u} \leftarrow \vec{u} + A \vec{v} \), i.e.
adds the product of a ShellMatrix
A
and a NumericVector
v
to this
.
Definition at line 405 of file numeric_vector.C.
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overridevirtual |
Computes \( \vec{u} \leftarrow \vec{u} + A^T \vec{v} \), i.e.
adds the product of the transpose of a SparseMatrix
A
and a NumericVector
v
to this
.
Implements libMesh::NumericVector< T >.
Definition at line 281 of file laspack_vector.C.
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staticinherited |
Builds a NumericVector
on the processors in communicator comm
using the linear solver package specified by solver_package
.
Definition at line 50 of file numeric_vector.C.
Referenced by libMesh::ExactSolution::_compute_error(), libMesh::UniformRefinementEstimator::_estimate_error(), libMesh::System::add_vector(), libMesh::TransientRBConstruction::allocate_data_structures(), libMesh::RBConstruction::allocate_data_structures(), libMesh::TransientRBConstruction::assemble_affine_expansion(), libMesh::EquationSystems::build_parallel_elemental_solution_vector(), libMesh::EquationSystems::build_parallel_solution_vector(), libMesh::System::calculate_norm(), libMesh::RBConstruction::compute_Fq_representor_innerprods(), libMesh::RBConstruction::compute_output_dual_innerprods(), libMesh::RBConstruction::compute_residual_dual_norm_slow(), libMesh::DiagonalMatrix< T >::DiagonalMatrix(), libMesh::AdjointRefinementEstimator::estimate_error(), libMesh::ExactErrorEstimator::estimate_error(), libMesh::CondensedEigenSystem::get_eigenpair(), main(), libMesh::TransientRBConstruction::mass_matrix_scaled_matvec(), libMesh::DofMap::process_mesh_constraint_rows(), libMesh::InterMeshProjection::project_system_vectors(), libMesh::RBEvaluation::read_in_vectors_from_multiple_files(), libMesh::TransientRBConstruction::read_riesz_representors_from_files(), libMesh::RBConstruction::read_riesz_representors_from_files(), OverlappingAlgebraicGhostingTest::run_ghosting_test(), OverlappingCouplingGhostingTest::run_sparsity_pattern_test(), libMesh::TransientRBConstruction::set_error_temporal_data(), ConstraintOperatorTest::test1DCoarseningOperator(), MeshfunctionDFEM::test_mesh_function_dfem(), MeshfunctionDFEM::test_mesh_function_dfem_grad(), MeshFunctionTest::test_p_level(), DiagonalMatrixTest::testNumerics(), SystemsTest::testProjectCubeWithMeshFunction(), libMesh::RBConstruction::train_reduced_basis_with_POD(), libMesh::MeshFunctionSolutionTransfer::transfer(), libMesh::TransientRBConstruction::truth_assembly(), libMesh::RBConstruction::truth_assembly(), libMesh::TransientRBConstruction::update_RB_initial_condition_all_N(), libMesh::TransientRBConstruction::update_RB_system_matrices(), libMesh::RBConstruction::update_RB_system_matrices(), libMesh::TransientRBConstruction::update_residual_terms(), and libMesh::RBConstruction::update_residual_terms().
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inlineoverridevirtual |
Restores the NumericVector<T>
to a pristine state.
Reimplemented from libMesh::NumericVector< T >.
Definition at line 402 of file laspack_vector.h.
References libMesh::libMeshPrivateData::_is_initialized, and libMesh::initialized().
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inlineoverridevirtual |
Implements libMesh::NumericVector< T >.
Definition at line 443 of file laspack_vector.h.
References libMesh::NumericVector< T >::init().
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inlineoverridevirtual |
Calls the NumericVector's internal assembly routines, ensuring that the values are consistent across processors.
Implements libMesh::NumericVector< T >.
Definition at line 389 of file laspack_vector.h.
References libMesh::initialized(), and libMesh::libmesh_assert().
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inlinevirtualinherited |
true
if the vector is closed and ready for computation, false otherwise. Definition at line 164 of file numeric_vector.h.
Referenced by libMesh::System::add_vector(), libMesh::PetscVector< libMesh::Number >::localize(), libMesh::DofMap::max_constraint_error(), libMesh::EigenSparseVector< T >::operator=(), libMesh::LaspackVector< T >::operator=(), and libMesh::PetscVector< libMesh::Number >::operator=().
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inlineinherited |
Parallel::Communicator
object used by this mesh. Definition at line 97 of file parallel_object.h.
References libMesh::ParallelObject::_communicator.
Referenced by libMesh::__libmesh_petsc_diff_solver_jacobian(), libMesh::__libmesh_petsc_diff_solver_monitor(), libMesh::__libmesh_petsc_diff_solver_residual(), libMesh::__libmesh_tao_equality_constraints(), libMesh::__libmesh_tao_equality_constraints_jacobian(), libMesh::__libmesh_tao_gradient(), libMesh::__libmesh_tao_hessian(), libMesh::__libmesh_tao_inequality_constraints(), libMesh::__libmesh_tao_inequality_constraints_jacobian(), libMesh::__libmesh_tao_objective(), libMesh::MeshRefinement::_coarsen_elements(), libMesh::ExactSolution::_compute_error(), libMesh::UniformRefinementEstimator::_estimate_error(), libMesh::Partitioner::_find_global_index_by_pid_map(), libMesh::BoundaryInfo::_find_id_maps(), libMesh::SlepcEigenSolver< libMesh::Number >::_petsc_shell_matrix_get_diagonal(), libMesh::PetscLinearSolver< Number >::_petsc_shell_matrix_get_diagonal(), libMesh::SlepcEigenSolver< libMesh::Number >::_petsc_shell_matrix_mult(), libMesh::PetscLinearSolver< Number >::_petsc_shell_matrix_mult(), libMesh::PetscLinearSolver< Number >::_petsc_shell_matrix_mult_add(), libMesh::MeshRefinement::_refine_elements(), libMesh::MeshRefinement::_smooth_flags(), libMesh::DofMap::add_constraints_to_send_list(), add_cube_convex_hull_to_mesh(), libMesh::PetscDMWrapper::add_dofs_helper(), libMesh::PetscDMWrapper::add_dofs_to_section(), libMesh::TransientRBConstruction::add_IC_to_RB_space(), libMesh::EigenSystem::add_matrices(), libMesh::System::add_matrix(), libMesh::RBConstruction::add_scaled_matrix_and_vector(), libMesh::System::add_variable(), libMesh::System::add_variables(), libMesh::System::add_vector(), libMesh::MeshTools::Modification::all_tri(), libMesh::LaplaceMeshSmoother::allgather_graph(), libMesh::DofMap::allgather_recursive_constraints(), libMesh::TransientRBConstruction::allocate_data_structures(), libMesh::RBConstruction::allocate_data_structures(), libMesh::TransientRBConstruction::assemble_affine_expansion(), libMesh::FEMSystem::assemble_qoi(), libMesh::Nemesis_IO::assert_symmetric_cmaps(), libMesh::MeshCommunication::assign_global_indices(), libMesh::Partitioner::assign_partitioning(), libMesh::MeshTools::Generation::build_extrusion(), libMesh::BoundaryInfo::build_node_list_from_side_list(), libMesh::EquationSystems::build_parallel_elemental_solution_vector(), libMesh::EquationSystems::build_parallel_solution_vector(), libMesh::PetscDMWrapper::build_section(), libMesh::PetscDMWrapper::build_sf(), libMesh::MeshBase::cache_elem_data(), libMesh::System::calculate_norm(), libMesh::DofMap::check_dirichlet_bcid_consistency(), libMesh::RBConstruction::compute_Fq_representor_innerprods(), libMesh::RBConstruction::compute_max_error_bound(), libMesh::Nemesis_IO_Helper::compute_num_global_elem_blocks(), libMesh::Nemesis_IO_Helper::compute_num_global_nodesets(), libMesh::Nemesis_IO_Helper::compute_num_global_sidesets(), libMesh::RBConstruction::compute_output_dual_innerprods(), libMesh::RBConstruction::compute_residual_dual_norm_slow(), libMesh::RBSCMConstruction::compute_SCM_bounds_on_training_set(), libMesh::DofMap::computed_sparsity_already(), libMesh::Problem_Interface::computeF(), libMesh::Problem_Interface::computeJacobian(), libMesh::Problem_Interface::computePreconditioner(), libMesh::ContinuationSystem::ContinuationSystem(), libMesh::MeshBase::copy_constraint_rows(), libMesh::ExodusII_IO::copy_elemental_solution(), libMesh::ExodusII_IO::copy_nodal_solution(), libMesh::ExodusII_IO::copy_scalar_solution(), libMesh::MeshTools::correct_node_proc_ids(), libMesh::MeshTools::create_bounding_box(), libMesh::DofMap::create_dof_constraints(), libMesh::MeshTools::create_nodal_bounding_box(), libMesh::MeshRefinement::create_parent_error_vector(), libMesh::MeshTools::create_processor_bounding_box(), libMesh::MeshTools::create_subdomain_bounding_box(), libMesh::PetscMatrix< libMesh::Number >::create_submatrix_nosort(), libMesh::MeshCommunication::delete_remote_elements(), libMesh::RBEIMEvaluation::distribute_bfs(), libMesh::DofMap::distribute_dofs(), DMlibMeshFunction(), DMlibMeshJacobian(), DMlibMeshSetSystem_libMesh(), DMVariableBounds_libMesh(), libMesh::DTKSolutionTransfer::DTKSolutionTransfer(), libMesh::MeshRefinement::eliminate_unrefined_patches(), libMesh::RBEIMConstruction::enrich_eim_approximation_on_interiors(), libMesh::RBEIMConstruction::enrich_eim_approximation_on_nodes(), libMesh::RBEIMConstruction::enrich_eim_approximation_on_sides(), libMesh::TransientRBConstruction::enrich_RB_space(), libMesh::EpetraVector< T >::EpetraVector(), AssembleOptimization::equality_constraints(), libMesh::PatchRecoveryErrorEstimator::estimate_error(), libMesh::WeightedPatchRecoveryErrorEstimator::estimate_error(), libMesh::AdjointRefinementEstimator::estimate_error(), libMesh::ExactErrorEstimator::estimate_error(), libMesh::MeshRefinement::flag_elements_by_elem_fraction(), libMesh::MeshRefinement::flag_elements_by_error_fraction(), libMesh::MeshRefinement::flag_elements_by_error_tolerance(), libMesh::MeshRefinement::flag_elements_by_mean_stddev(), libMesh::MeshRefinement::flag_elements_by_nelem_target(), libMesh::RBEIMEvaluation::gather_bfs(), libMesh::DofMap::gather_constraints(), libMesh::MeshfreeInterpolation::gather_remote_data(), libMesh::CondensedEigenSystem::get_eigenpair(), libMesh::RBEIMEvaluation::get_eim_basis_function_node_value(), libMesh::RBEIMEvaluation::get_eim_basis_function_side_value(), libMesh::RBEIMEvaluation::get_eim_basis_function_value(), libMesh::MeshBase::get_info(), libMesh::System::get_info(), libMesh::DofMap::get_info(), libMesh::ImplicitSystem::get_linear_solver(), libMesh::RBEIMConstruction::get_max_abs_value(), libMesh::RBEIMConstruction::get_node_max_abs_value(), libMesh::RBEIMEvaluation::get_parametrized_function_node_value(), libMesh::RBEIMEvaluation::get_parametrized_function_side_value(), libMesh::RBEIMEvaluation::get_parametrized_function_value(), libMesh::RBEIMConstruction::get_random_point(), AssembleOptimization::inequality_constraints(), AssembleOptimization::inequality_constraints_jacobian(), libMesh::LocationMap< T >::init(), libMesh::TimeSolver::init(), libMesh::SystemSubsetBySubdomain::init(), libMesh::PetscDMWrapper::init_and_attach_petscdm(), libMesh::ExodusII_IO_Helper::initialize(), libMesh::OptimizationSystem::initialize_equality_constraints_storage(), libMesh::OptimizationSystem::initialize_inequality_constraints_storage(), libMesh::RBEIMConstruction::initialize_parametrized_functions_in_training_set(), libMesh::RBEIMConstruction::inner_product(), integrate_function(), libMesh::MeshTools::libmesh_assert_consistent_distributed(), libMesh::MeshTools::libmesh_assert_consistent_distributed_nodes(), libMesh::MeshTools::libmesh_assert_contiguous_dof_ids(), libMesh::MeshTools::libmesh_assert_equal_connectivity(), libMesh::MeshTools::libmesh_assert_equal_points(), libMesh::MeshTools::libmesh_assert_parallel_consistent_new_node_procids(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Elem >(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Node >(), libMesh::MeshTools::libmesh_assert_topology_consistent_procids< Node >(), libMesh::MeshTools::libmesh_assert_valid_boundary_ids(), libMesh::MeshTools::libmesh_assert_valid_dof_ids(), libMesh::MeshTools::libmesh_assert_valid_neighbors(), libMesh::DistributedMesh::libmesh_assert_valid_parallel_flags(), libMesh::DistributedMesh::libmesh_assert_valid_parallel_object_ids(), libMesh::DistributedMesh::libmesh_assert_valid_parallel_p_levels(), libMesh::MeshTools::libmesh_assert_valid_refinement_flags(), libMesh::MeshTools::libmesh_assert_valid_unique_ids(), libMesh::libmesh_petsc_linesearch_shellfunc(), libMesh::libmesh_petsc_preconditioner_apply(), libMesh::libmesh_petsc_recalculate_monitor(), libMesh::libmesh_petsc_snes_fd_residual(), libMesh::libmesh_petsc_snes_jacobian(), libMesh::libmesh_petsc_snes_mffd_interface(), libMesh::libmesh_petsc_snes_mffd_residual(), libMesh::libmesh_petsc_snes_postcheck(), libMesh::libmesh_petsc_snes_precheck(), libMesh::libmesh_petsc_snes_residual(), libMesh::libmesh_petsc_snes_residual_helper(), libMesh::MeshRefinement::limit_level_mismatch_at_edge(), libMesh::MeshRefinement::limit_level_mismatch_at_node(), libMesh::MeshRefinement::limit_overrefined_boundary(), libMesh::MeshRefinement::limit_underrefined_boundary(), libMesh::LinearImplicitSystem::LinearImplicitSystem(), main(), libMesh::MeshRefinement::make_coarsening_compatible(), libMesh::MeshCommunication::make_elems_parallel_consistent(), libMesh::MeshRefinement::make_flags_parallel_consistent(), libMesh::MeshCommunication::make_new_node_proc_ids_parallel_consistent(), libMesh::MeshCommunication::make_new_nodes_parallel_consistent(), libMesh::MeshCommunication::make_node_bcids_parallel_consistent(), libMesh::MeshCommunication::make_node_ids_parallel_consistent(), libMesh::MeshCommunication::make_node_proc_ids_parallel_consistent(), libMesh::MeshCommunication::make_node_unique_ids_parallel_consistent(), libMesh::MeshCommunication::make_nodes_parallel_consistent(), libMesh::MeshCommunication::make_p_levels_parallel_consistent(), libMesh::MeshRefinement::make_refinement_compatible(), libMesh::TransientRBConstruction::mass_matrix_scaled_matvec(), libMesh::FEMSystem::mesh_position_set(), libMesh::TriangulatorInterface::MeshedHole::MeshedHole(), LinearElasticityWithContact::move_mesh(), libMesh::DistributedMesh::n_active_elem(), libMesh::MeshTools::n_active_levels(), libMesh::BoundaryInfo::n_boundary_conds(), libMesh::DofMap::n_constrained_dofs(), libMesh::BoundaryInfo::n_edge_conds(), libMesh::CondensedEigenSystem::n_global_non_condensed_dofs(), libMesh::MeshTools::n_levels(), MixedOrderTest::n_neighbor_links(), libMesh::BoundaryInfo::n_nodeset_conds(), libMesh::SparsityPattern::Build::n_nonzeros(), libMesh::MeshTools::n_p_levels(), libMesh::BoundaryInfo::n_shellface_conds(), libMesh::RBEIMEvaluation::node_distribute_bfs(), libMesh::RBEIMEvaluation::node_gather_bfs(), libMesh::RBEIMConstruction::node_inner_product(), libMesh::MeshBase::operator==(), libMesh::DistributedMesh::parallel_max_elem_id(), libMesh::DistributedMesh::parallel_max_node_id(), libMesh::ReplicatedMesh::parallel_max_unique_id(), libMesh::DistributedMesh::parallel_max_unique_id(), libMesh::DistributedMesh::parallel_n_elem(), libMesh::DistributedMesh::parallel_n_nodes(), libMesh::SparsityPattern::Build::parallel_sync(), libMesh::BoundaryInfo::parallel_sync_node_ids(), libMesh::BoundaryInfo::parallel_sync_side_ids(), libMesh::MeshTools::paranoid_n_levels(), libMesh::Partitioner::partition(), libMesh::Partitioner::partition_unpartitioned_elements(), libMesh::petsc_auto_fieldsplit(), libMesh::System::point_gradient(), libMesh::System::point_hessian(), libMesh::System::point_value(), libMesh::MeshBase::prepare_for_use(), libMesh::DofMap::print_dof_constraints(), libMesh::DofMap::process_mesh_constraint_rows(), libMesh::Partitioner::processor_pairs_to_interface_nodes(), libMesh::InterMeshProjection::project_system_vectors(), FEMParameters::read(), libMesh::Nemesis_IO::read(), libMesh::XdrIO::read(), libMesh::EquationSystems::read(), libMesh::ExodusII_IO::read_header(), libMesh::CheckpointIO::read_header(), libMesh::XdrIO::read_header(), libMesh::System::read_header(), libMesh::RBEIMEvaluation::read_in_interior_basis_functions(), libMesh::RBEIMEvaluation::read_in_node_basis_functions(), libMesh::RBEIMEvaluation::read_in_side_basis_functions(), libMesh::RBEvaluation::read_in_vectors_from_multiple_files(), libMesh::System::read_legacy_data(), libMesh::TransientRBConstruction::read_riesz_representors_from_files(), libMesh::RBConstruction::read_riesz_representors_from_files(), libMesh::System::read_SCALAR_dofs(), libMesh::XdrIO::read_serialized_bc_names(), libMesh::XdrIO::read_serialized_bcs_helper(), libMesh::System::read_serialized_blocked_dof_objects(), libMesh::XdrIO::read_serialized_connectivity(), libMesh::XdrIO::read_serialized_nodes(), libMesh::XdrIO::read_serialized_nodesets(), libMesh::XdrIO::read_serialized_subdomain_names(), libMesh::System::read_serialized_vector(), libMesh::Nemesis_IO_Helper::read_var_names_impl(), libMesh::MeshBase::recalculate_n_partitions(), libMesh::MeshRefinement::refine_and_coarsen_elements(), libMesh::DistributedMesh::renumber_dof_objects(), libMesh::DistributedMesh::renumber_nodes_and_elements(), LinearElasticityWithContact::residual_and_jacobian(), OverlappingAlgebraicGhostingTest::run_ghosting_test(), OverlappingCouplingGhostingTest::run_sparsity_pattern_test(), scale_mesh_and_plot(), libMesh::DofMap::scatter_constraints(), libMesh::CheckpointIO::select_split_config(), libMesh::GenericProjector< FFunctor, GFunctor, FValue, ProjectionAction >::send_and_insert_dof_values(), libMesh::TransientRBConstruction::set_error_temporal_data(), libMesh::Partitioner::set_interface_node_processor_ids_BFS(), libMesh::Partitioner::set_interface_node_processor_ids_linear(), libMesh::Partitioner::set_interface_node_processor_ids_petscpartitioner(), libMesh::Partitioner::set_node_processor_ids(), libMesh::DofMap::set_nonlocal_dof_objects(), libMesh::Partitioner::set_parent_processor_ids(), libMesh::PetscDMWrapper::set_point_range_in_section(), libMesh::PetscDiffSolver::setup_petsc_data(), libMesh::RBEIMEvaluation::side_distribute_bfs(), libMesh::RBEIMEvaluation::side_gather_bfs(), libMesh::RBEIMConstruction::side_inner_product(), libMesh::Partitioner::single_partition(), libMesh::LaplaceMeshSmoother::smooth(), libMesh::split_mesh(), libMesh::RBEIMConstruction::store_eim_solutions_for_training_set(), libMesh::MeshBase::subdomain_ids(), libMesh::BoundaryInfo::sync(), ConstraintOperatorTest::test1DCoarseningNewNodes(), ConstraintOperatorTest::test1DCoarseningOperator(), libMesh::MeshRefinement::test_level_one(), MeshfunctionDFEM::test_mesh_function_dfem(), MeshfunctionDFEM::test_mesh_function_dfem_grad(), MeshFunctionTest::test_p_level(), libMesh::MeshRefinement::test_unflagged(), DofMapTest::testBadElemFECombo(), SystemsTest::testBlockRestrictedVarNDofs(), BoundaryInfoTest::testBoundaryOnChildrenErrors(), MeshInputTest::testExodusIGASidesets(), MeshTriangulationTest::testFoundCenters(), PointLocatorTest::testLocator(), BoundaryInfoTest::testMesh(), PointLocatorTest::testPlanar(), MeshTriangulationTest::testPoly2TriRefinementBase(), SystemsTest::testProjectCubeWithMeshFunction(), BoundaryInfoTest::testRenumber(), CheckpointIOTest::testSplitter(), MeshInputTest::testTetgenIO(), MeshTriangulationTest::testTriangulatorInterp(), MeshTriangulationTest::testTriangulatorMeshedHoles(), libMesh::MeshTools::total_weight(), libMesh::RBConstruction::train_reduced_basis_with_POD(), libMesh::MeshFunctionSolutionTransfer::transfer(), libMesh::MeshfreeSolutionTransfer::transfer(), libMesh::Poly2TriTriangulator::triangulate(), libMesh::TransientRBConstruction::truth_assembly(), libMesh::RBConstruction::truth_assembly(), libMesh::MeshRefinement::uniformly_coarsen(), libMesh::TransientRBConstruction::update_RB_initial_condition_all_N(), libMesh::TransientRBConstruction::update_RB_system_matrices(), libMesh::RBConstruction::update_RB_system_matrices(), libMesh::TransientRBConstruction::update_residual_terms(), libMesh::RBConstruction::update_residual_terms(), libMesh::NameBasedIO::write(), libMesh::XdrIO::write(), libMesh::VTKIO::write_nodal_data(), libMesh::RBEIMEvaluation::write_out_interior_basis_functions(), libMesh::RBEIMEvaluation::write_out_node_basis_functions(), libMesh::RBEIMEvaluation::write_out_side_basis_functions(), libMesh::RBEvaluation::write_out_vectors(), libMesh::TransientRBConstruction::write_riesz_representors_to_files(), libMesh::RBConstruction::write_riesz_representors_to_files(), libMesh::System::write_SCALAR_dofs(), libMesh::XdrIO::write_serialized_bcs_helper(), libMesh::System::write_serialized_blocked_dof_objects(), libMesh::XdrIO::write_serialized_connectivity(), libMesh::XdrIO::write_serialized_nodes(), libMesh::XdrIO::write_serialized_nodesets(), libMesh::RBDataSerialization::RBEvaluationSerialization::write_to_file(), libMesh::RBDataSerialization::TransientRBEvaluationSerialization::write_to_file(), libMesh::RBDataSerialization::RBEIMEvaluationSerialization::write_to_file(), and libMesh::RBDataSerialization::RBSCMEvaluationSerialization::write_to_file().
|
virtualinherited |
-1
when this
is equivalent to other_vector
(up to the given threshold
), or the first index where abs
(a[i]-b[i]) exceeds the threshold. Definition at line 109 of file numeric_vector.C.
|
inherited |
v
are able to be read for global operations with one-another Definition at line 423 of file numeric_vector.C.
|
overridevirtual |
Negates the imaginary component of each entry in the vector.
Implements libMesh::NumericVector< T >.
Definition at line 187 of file laspack_vector.C.
References libMesh::libmesh_conj().
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inlinevirtualinherited |
Fills in subvector
from this vector using the indices in rows
.
Similar to the create_submatrix()
routine for the SparseMatrix class, it is currently only implemented for PetscVectors.
Reimplemented in libMesh::PetscVector< T >, and libMesh::EpetraVector< T >.
Definition at line 725 of file numeric_vector.h.
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staticinherited |
Definition at line 100 of file reference_counter.C.
References libMesh::ReferenceCounter::_enable_print_counter.
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overridevirtual |
v
.Uses the complex-conjugate of v
in the complex-valued case.
Implements libMesh::NumericVector< T >.
Definition at line 309 of file laspack_vector.C.
References libMesh::LaspackVector< T >::_vec, libMesh::initialized(), and libMesh::libmesh_assert().
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inlinevirtualinherited |
|
staticinherited |
Methods to enable/disable the reference counter output from print_info()
Definition at line 94 of file reference_counter.C.
References libMesh::ReferenceCounter::_enable_print_counter.
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inlineoverridevirtual |
0
. Implements libMesh::NumericVector< T >.
Definition at line 480 of file laspack_vector.h.
References libMesh::initialized(), and libMesh::libmesh_assert().
|
inlinevirtualinherited |
Access multiple components at once.
values
will not be reallocated; it should already have enough space. The default implementation calls operator()
for each index, but some implementations may supply faster methods here.
Reimplemented in libMesh::PetscVector< T >.
Definition at line 869 of file numeric_vector.h.
Referenced by libMesh::UniformRefinementEstimator::_estimate_error(), HDGProblem::assemble(), libMesh::EquationSystems::build_parallel_solution_vector(), compute_residual(), libMesh::JumpErrorEstimator::estimate_error(), libMesh::AdjointRefinementEstimator::estimate_error(), libMesh::FEMContext::pre_fe_reinit(), libMesh::System::project_vector(), libMesh::System::restrict_vectors(), libMesh::System::solve_for_unconstrained_dofs(), and libMesh::System::vector_name().
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inlineinherited |
Access multiple components at once.
values
will be resized, if necessary, and filled. The default implementation calls operator()
for each index, but some implementations may supply faster methods here.
Definition at line 883 of file numeric_vector.h.
|
staticinherited |
Gets a string containing the reference information.
Definition at line 47 of file reference_counter.C.
References libMesh::ReferenceCounter::_counts, and libMesh::Quality::name().
Referenced by libMesh::ReferenceCounter::print_info().
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virtualinherited |
-1
when this
is equivalent to other_vector
(up to the given global relative threshold
), or the first index where abs
(a[i]-b[i])/max_j(a[j],b[j]) exceeds the threshold. Definition at line 167 of file numeric_vector.C.
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inlineprotectednoexceptinherited |
Increments the construction counter.
Should be called in the constructor of any derived class that will be reference counted.
Definition at line 183 of file reference_counter.h.
References libMesh::err, libMesh::BasicOStreamProxy< charT, traits >::get(), libMesh::Quality::name(), and libMesh::Threads::spin_mtx.
Referenced by libMesh::ReferenceCountedObject< RBParametrized >::ReferenceCountedObject().
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inlineprotectednoexceptinherited |
Increments the destruction counter.
Should be called in the destructor of any derived class that will be reference counted.
Definition at line 207 of file reference_counter.h.
References libMesh::err, libMesh::BasicOStreamProxy< charT, traits >::get(), libMesh::Quality::name(), and libMesh::Threads::spin_mtx.
Referenced by libMesh::ReferenceCountedObject< RBParametrized >::~ReferenceCountedObject().
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overridevirtual |
Change the dimension of the vector to n
.
The reserved memory for this vector remains unchanged if possible. If n==0
, all memory is freed. Therefore, if you want to resize the vector and release the memory not needed, you have to first call init(0)
and then init(n)
. This behaviour is analogous to that of the STL containers.
On fast==false
, the vector is filled by zeros.
Implements libMesh::NumericVector< T >.
Referenced by libMesh::LaspackVector< T >::LaspackVector().
|
inlineoverridevirtual |
Call init()
with n_local = N.
Implements libMesh::NumericVector< T >.
Definition at line 354 of file laspack_vector.h.
References libMesh::TriangleWrapper::init().
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overridevirtual |
Create a vector that holds the local indices plus those specified in the ghost
argument.
Implements libMesh::NumericVector< T >.
|
overridevirtual |
Creates a vector that has the same dimension and storage type as other
, including ghost dofs.
Implements libMesh::NumericVector< T >.
Definition at line 379 of file laspack_vector.h.
References libMesh::TriangleWrapper::init(), libMesh::NumericVector< T >::local_size(), libMesh::NumericVector< T >::size(), and libMesh::NumericVector< T >::type().
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inlinevirtualinherited |
true
if the vector has been initialized, false otherwise. Definition at line 148 of file numeric_vector.h.
Referenced by libMesh::System::add_vector(), libMesh::ImplicitSystem::assemble(), libMesh::PetscVector< libMesh::Number >::create_subvector(), and libMesh::PetscVector< libMesh::Number >::init().
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virtualinherited |
Inserts the entries of v
in *this at the locations specified by v
.
Note that library implementations of this method are thread safe
Reimplemented in libMesh::PetscVector< T >, and libMesh::EpetraVector< T >.
Definition at line 84 of file numeric_vector.C.
Referenced by Biharmonic::JR::bounds().
|
inlineinherited |
Inserts the entries of v
in *this at the locations specified by v
.
This method is guaranteed to be thread-safe as long as library implementations of NumericVector
are used
Definition at line 922 of file numeric_vector.h.
|
inherited |
Inserts the entries of v
in *this at the locations specified by v
.
This method is guaranteed to be thread-safe as long as library implementations of NumericVector
are used
Definition at line 96 of file numeric_vector.C.
|
inlineinherited |
Inserts the entries of v
in *this at the locations specified by v
.
This method is guaranteed to be thread-safe as long as library implementations of NumericVector
are used
Definition at line 934 of file numeric_vector.h.
|
inlineinherited |
Inserts the entries of v
in *this at the locations specified by v
.
This method is guaranteed to be thread-safe as long as library implementations of NumericVector
are used
Definition at line 946 of file numeric_vector.h.
|
overridevirtual |
Implements libMesh::NumericVector< T >.
Definition at line 54 of file laspack_vector.C.
References libMesh::closed(), libMesh::libmesh_assert(), and libMesh::Real.
|
overridevirtual |
Implements libMesh::NumericVector< T >.
Definition at line 64 of file laspack_vector.C.
References libMesh::closed(), libMesh::libmesh_assert(), and libMesh::Real.
|
inherited |
this
. Definition at line 363 of file numeric_vector.C.
|
inlineoverridevirtual |
size()
. Implements libMesh::NumericVector< T >.
Definition at line 491 of file laspack_vector.h.
References libMesh::initialized(), and libMesh::libmesh_assert().
|
overridevirtual |
Implements libMesh::NumericVector< T >.
Definition at line 74 of file laspack_vector.C.
References libMesh::closed(), libMesh::libmesh_assert(), and libMesh::Real.
|
virtualinherited |
-1
when this
is equivalent to other_vector
, (up to the given local relative threshold
), or the first index where abs
(a[i]-b[i])/max(a[i],b[i]) exceeds the threshold. Definition at line 137 of file numeric_vector.C.
|
inlineoverridevirtual |
index_stop
- index_start
. Implements libMesh::NumericVector< T >.
Definition at line 469 of file laspack_vector.h.
References libMesh::initialized(), and libMesh::libmesh_assert().
|
overridevirtual |
Creates a copy of the global vector in the local vector v_local
.
Implements libMesh::NumericVector< T >.
Definition at line 456 of file laspack_vector.C.
References libMesh::index_range().
|
overridevirtual |
Same, but fills a NumericVector<T>
instead of a std::vector
.
Implements libMesh::NumericVector< T >.
Definition at line 396 of file laspack_vector.C.
References libMesh::libmesh_assert().
|
overridevirtual |
Creates a local vector v_local
containing only information relevant to this processor, as defined by the send_list
.
Implements libMesh::NumericVector< T >.
|
overridevirtual |
Fill in the local std::vector "v_local" with the global indices given in "indices".
Example:
* On 4 procs *this = {a, b, c, d, e, f, g, h, i} is a parallel vector. * On each proc, the indices arrays are set up as: * proc0, indices = {1,2,4,5} * proc1, indices = {2,5,6,8} * proc2, indices = {2,3,6,7} * proc3, indices = {0,1,2,3} * * After calling this version of localize, the v_local vectors are: * proc0, v_local = {b,c,e,f} * proc1, v_local = {c,f,g,i} * proc2, v_local = {c,d,g,h} * proc3, v_local = {a,b,c,d} *
This function is useful in parallel I/O routines, when you have a parallel vector of solution values which you want to write a subset of.
Implements libMesh::NumericVector< T >.
Definition at line 426 of file laspack_vector.C.
References libMesh::index_range().
|
overridevirtual |
Updates a local vector with selected values from neighboring processors, as defined by send_list
.
Implements libMesh::NumericVector< T >.
|
overridevirtual |
Creates a local copy of the global vector in v_local
only on processor proc_id
.
By default the data is sent to processor 0. This method is useful for outputting data from one processor.
Implements libMesh::NumericVector< T >.
Definition at line 468 of file laspack_vector.C.
|
overridevirtual |
Implements libMesh::NumericVector< T >.
Definition at line 493 of file laspack_vector.C.
References libMesh::initialized(), libMesh::libmesh_assert(), libMesh::libmesh_real(), and libMesh::Real.
|
inlineoverridevirtual |
Although we define numeric_index_type, and it is typically required that the NumericVector's underlying implementation's indices have size equal to sizeof(numeric_index_type), these two types can still have different signedness, which affects the maximum number of values which can be stored in the NumericVector.
Implements libMesh::NumericVector< T >.
Definition at line 573 of file laspack_vector.h.
|
overridevirtual |
Implements libMesh::NumericVector< T >.
Definition at line 512 of file laspack_vector.C.
References libMesh::initialized(), libMesh::libmesh_assert(), libMesh::libmesh_real(), and libMesh::Real.
|
inlinestaticinherited |
Prints the number of outstanding (created, but not yet destroyed) objects.
Definition at line 85 of file reference_counter.h.
References libMesh::ReferenceCounter::_n_objects.
Referenced by libMesh::LibMeshInit::~LibMeshInit().
|
inlineinherited |
Definition at line 103 of file parallel_object.h.
References libMesh::ParallelObject::_communicator, libMesh::libmesh_assert(), and TIMPI::Communicator::size().
Referenced by libMesh::Partitioner::_find_global_index_by_pid_map(), libMesh::BoundaryInfo::_find_id_maps(), libMesh::DofMap::add_constraints_to_send_list(), libMesh::PetscDMWrapper::add_dofs_to_section(), libMesh::DistributedMesh::add_elem(), libMesh::DofMap::add_neighbors_to_send_list(), libMesh::DistributedMesh::add_node(), libMesh::System::add_vector(), libMesh::LaplaceMeshSmoother::allgather_graph(), libMesh::DofMap::allgather_recursive_constraints(), libMesh::FEMSystem::assembly(), libMesh::Nemesis_IO::assert_symmetric_cmaps(), libMesh::Partitioner::assign_partitioning(), libMesh::AztecLinearSolver< T >::AztecLinearSolver(), libMesh::EquationSystems::build_parallel_elemental_solution_vector(), libMesh::DistributedMesh::clear(), libMesh::DistributedMesh::clear_elems(), libMesh::Nemesis_IO_Helper::compute_border_node_ids(), libMesh::Nemesis_IO_Helper::construct_nemesis_filename(), libMesh::ExodusII_IO::copy_scalar_solution(), libMesh::Nemesis_IO::copy_scalar_solution(), libMesh::UnstructuredMesh::create_pid_mesh(), libMesh::MeshTools::create_processor_bounding_box(), libMesh::DofMap::distribute_dofs(), libMesh::DofMap::distribute_scalar_dofs(), libMesh::DistributedMesh::DistributedMesh(), libMesh::EnsightIO::EnsightIO(), libMesh::RBEIMEvaluation::gather_bfs(), libMesh::MeshBase::get_info(), libMesh::SystemSubsetBySubdomain::init(), libMesh::PetscDMWrapper::init_and_attach_petscdm(), libMesh::Nemesis_IO_Helper::initialize(), libMesh::ExodusII_IO_Helper::initialize(), libMesh::DistributedMesh::insert_elem(), libMesh::MeshTools::libmesh_assert_contiguous_dof_ids(), libMesh::MeshTools::libmesh_assert_parallel_consistent_new_node_procids(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Elem >(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Node >(), libMesh::MeshTools::libmesh_assert_topology_consistent_procids< Node >(), libMesh::MeshTools::libmesh_assert_valid_boundary_ids(), libMesh::MeshTools::libmesh_assert_valid_dof_ids(), libMesh::MeshTools::libmesh_assert_valid_neighbors(), libMesh::MeshTools::libmesh_assert_valid_refinement_flags(), libMesh::DofMap::local_variable_indices(), libMesh::MeshRefinement::make_coarsening_compatible(), libMesh::MeshBase::n_active_elem_on_proc(), libMesh::MeshBase::n_elem_on_proc(), libMesh::MeshBase::n_nodes_on_proc(), libMesh::RBEIMEvaluation::node_gather_bfs(), libMesh::Partitioner::partition(), libMesh::MeshBase::partition(), libMesh::Partitioner::partition_unpartitioned_elements(), libMesh::System::point_gradient(), libMesh::System::point_hessian(), libMesh::System::point_value(), libMesh::DofMap::prepare_send_list(), libMesh::DofMap::print_dof_constraints(), libMesh::NameBasedIO::read(), libMesh::Nemesis_IO::read(), libMesh::CheckpointIO::read(), libMesh::CheckpointIO::read_connectivity(), libMesh::XdrIO::read_header(), libMesh::CheckpointIO::read_nodes(), libMesh::System::read_parallel_data(), libMesh::System::read_SCALAR_dofs(), libMesh::System::read_serialized_blocked_dof_objects(), libMesh::System::read_serialized_vector(), libMesh::DistributedMesh::renumber_dof_objects(), libMesh::Partitioner::repartition(), OverlappingFunctorTest::run_partitioner_test(), libMesh::DofMap::scatter_constraints(), libMesh::DistributedMesh::set_next_unique_id(), libMesh::DofMap::set_nonlocal_dof_objects(), libMesh::PetscDMWrapper::set_point_range_in_section(), WriteVecAndScalar::setupTests(), libMesh::RBEIMEvaluation::side_gather_bfs(), DistributedMeshTest::testRemoteElemError(), CheckpointIOTest::testSplitter(), libMesh::MeshRefinement::uniformly_coarsen(), libMesh::DistributedMesh::update_parallel_id_counts(), libMesh::GMVIO::write_binary(), libMesh::GMVIO::write_discontinuous_gmv(), libMesh::ExodusII_IO_Helper::write_nodal_coordinates(), libMesh::VTKIO::write_nodal_data(), libMesh::ExodusII_IO::write_nodal_data(), libMesh::System::write_parallel_data(), libMesh::System::write_SCALAR_dofs(), libMesh::XdrIO::write_serialized_bcs_helper(), libMesh::System::write_serialized_blocked_dof_objects(), libMesh::XdrIO::write_serialized_connectivity(), libMesh::XdrIO::write_serialized_nodes(), and libMesh::XdrIO::write_serialized_nodesets().
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inlineoverridevirtual |
Implements libMesh::NumericVector< T >.
Definition at line 536 of file laspack_vector.h.
References libMesh::initialized(), and libMesh::libmesh_assert().
|
overridevirtual |
Computes the component-wise multiplication of this vector's entries by another's, \( u_i \leftarrow u_i v_i \, \forall i\).
Implements libMesh::NumericVector< T >.
Definition at line 109 of file laspack_vector.C.
References libMesh::NumericVector< T >::size().
|
inlineinherited |
Scales the vector by a
, \( \vec{u} \leftarrow a\vec{u} \).
Equivalent to u.scale(a)
Definition at line 396 of file numeric_vector.h.
|
overridevirtual |
Adds v
to *this, \( \vec{u} \leftarrow \vec{u} + \vec{v} \).
Equivalent to u.add(1, v)
.
Implements libMesh::NumericVector< T >.
Definition at line 84 of file laspack_vector.C.
References libMesh::closed(), and libMesh::libmesh_assert().
|
overridevirtual |
Subtracts v
from *this, \( \vec{u} \leftarrow \vec{u} - \vec{v} \).
Equivalent to u.add
(-1, v).
Implements libMesh::NumericVector< T >.
Definition at line 97 of file laspack_vector.C.
References libMesh::closed(), and libMesh::libmesh_assert().
|
overridevirtual |
Computes the component-wise division of this vector's entries by another's, \( u_i \leftarrow \frac{u_i}{v_i} \, \forall i\).
Implements libMesh::NumericVector< T >.
Definition at line 134 of file laspack_vector.C.
References libMesh::NumericVector< T >::size().
|
inlineinherited |
Scales the vector by 1/a
, \( \vec{u} \leftarrow \frac{1}{a}\vec{u} \).
Equivalent to u.scale
(1./a)
Definition at line 414 of file numeric_vector.h.
LaspackVector< T > & libMesh::LaspackVector< T >::operator= | ( | const LaspackVector< T > & | v | ) |
Copy assignment operator.
Calls Asgn_VV() to assign the contents of one vector to another.
Definition at line 356 of file laspack_vector.C.
References libMesh::LaspackVector< T >::_vec, libMesh::NumericVector< T >::closed(), libMesh::initialized(), libMesh::libmesh_assert(), and libMesh::LaspackVector< T >::size().
|
delete |
|
overridevirtual |
Sets all entries of the vector to the value s
.
Implements libMesh::NumericVector< T >.
Definition at line 325 of file laspack_vector.C.
References libMesh::closed(), libMesh::initialized(), and libMesh::libmesh_assert().
|
overridevirtual |
This looks like a copy assignment operator, but note that, unlike normal copy assignment operators, it is pure virtual.
This function should be overridden in derived classes so that they can be copied correctly via references to the base class. This design usually isn't a good idea in general, but in this context it works because we usually don't have a mix of different kinds of NumericVectors active in the library at a single time.
Implements libMesh::NumericVector< T >.
Definition at line 339 of file laspack_vector.C.
References libMesh::libmesh_assert().
|
overridevirtual |
Sets (*this)(i) = v(i) for each entry of the vector.
Case 1: The vector is the same size of The global vector. Only add the local components.
Implements libMesh::NumericVector< T >.
Definition at line 378 of file laspack_vector.C.
References libMesh::index_range().
|
overridevirtual |
Computes \( u_i \leftarrow \frac{v_{1,i}}{v_{2,i}} \) (summation not implied) i.e.
the pointwise (component-wise) division of vec1
and vec2
, and stores the result in *this
.
Implements libMesh::NumericVector< T >.
Definition at line 486 of file laspack_vector.C.
|
overridevirtual |
Computes \( u_i \leftarrow u_i v_i \) (summation not implied) i.e.
the pointwise (component-wise) product of vec1
and vec2
, and stores the result in *this
.
Implements libMesh::NumericVector< T >.
Definition at line 479 of file laspack_vector.C.
|
inlinevirtualinherited |
Prints the local contents of the vector, by default to libMesh::out.
Definition at line 979 of file numeric_vector.h.
|
inlineinherited |
Definition at line 961 of file numeric_vector.h.
|
inlinevirtualinherited |
Prints the global contents of the vector, by default to libMesh::out.
Definition at line 1016 of file numeric_vector.h.
|
inlineinherited |
Definition at line 994 of file numeric_vector.h.
|
staticinherited |
Prints the reference information, by default to libMesh::out
.
Definition at line 81 of file reference_counter.C.
References libMesh::ReferenceCounter::_enable_print_counter, and libMesh::ReferenceCounter::get_info().
Referenced by libMesh::LibMeshInit::~LibMeshInit().
|
inlinevirtualinherited |
Print the contents of the vector in Matlab's sparse matrix format.
Optionally prints the vector to the file named name
. If name
is not specified it is dumped to the screen.
Reimplemented in libMesh::PetscVector< T >, and libMesh::PetscVector< libMesh::Number >.
Definition at line 714 of file numeric_vector.h.
Referenced by libMesh::RBConstruction::enrich_basis_from_rhs_terms().
|
inlineinherited |
Definition at line 114 of file parallel_object.h.
References libMesh::ParallelObject::_communicator, and TIMPI::Communicator::rank().
Referenced by libMesh::BoundaryInfo::_find_id_maps(), libMesh::PetscDMWrapper::add_dofs_to_section(), libMesh::DistributedMesh::add_elem(), libMesh::BoundaryInfo::add_elements(), libMesh::DofMap::add_neighbors_to_send_list(), libMesh::DistributedMesh::add_node(), libMesh::MeshTools::Modification::all_tri(), libMesh::DofMap::allgather_recursive_constraints(), libMesh::FEMSystem::assembly(), libMesh::Nemesis_IO::assert_symmetric_cmaps(), libMesh::Partitioner::assign_partitioning(), libMesh::Nemesis_IO_Helper::build_element_and_node_maps(), libMesh::Partitioner::build_graph(), libMesh::InfElemBuilder::build_inf_elem(), libMesh::BoundaryInfo::build_node_list_from_side_list(), libMesh::EquationSystems::build_parallel_elemental_solution_vector(), libMesh::EquationSystems::build_parallel_solution_vector(), libMesh::DistributedMesh::clear(), libMesh::DistributedMesh::clear_elems(), libMesh::ExodusII_IO_Helper::close(), libMesh::Nemesis_IO_Helper::compute_border_node_ids(), libMesh::Nemesis_IO_Helper::compute_communication_map_parameters(), libMesh::Nemesis_IO_Helper::compute_internal_and_border_elems_and_internal_nodes(), libMesh::RBConstruction::compute_max_error_bound(), libMesh::Nemesis_IO_Helper::compute_node_communication_maps(), libMesh::Nemesis_IO_Helper::compute_num_global_elem_blocks(), libMesh::Nemesis_IO_Helper::compute_num_global_nodesets(), libMesh::Nemesis_IO_Helper::compute_num_global_sidesets(), libMesh::Nemesis_IO_Helper::construct_nemesis_filename(), libMesh::ExodusII_IO::copy_elemental_solution(), libMesh::ExodusII_IO::copy_nodal_solution(), libMesh::ExodusII_IO::copy_scalar_solution(), libMesh::Nemesis_IO::copy_scalar_solution(), libMesh::MeshTools::correct_node_proc_ids(), libMesh::ExodusII_IO_Helper::create(), libMesh::DistributedMesh::delete_elem(), libMesh::MeshCommunication::delete_remote_elements(), libMesh::DofMap::distribute_dofs(), libMesh::DofMap::distribute_local_dofs_node_major(), libMesh::DofMap::distribute_local_dofs_var_major(), libMesh::DofMap::distribute_scalar_dofs(), libMesh::DistributedMesh::DistributedMesh(), libMesh::DofMap::end_dof(), libMesh::DofMap::end_old_dof(), libMesh::EnsightIO::EnsightIO(), libMesh::GenericProjector< FFunctor, GFunctor, FValue, ProjectionAction >::SubFunctor::find_dofs_to_send(), libMesh::MeshFunction::find_element(), libMesh::MeshFunction::find_elements(), libMesh::UnstructuredMesh::find_neighbors(), libMesh::DofMap::first_dof(), libMesh::DofMap::first_old_dof(), libMesh::RBEIMEvaluation::gather_bfs(), libMesh::Nemesis_IO_Helper::get_cmap_params(), libMesh::Nemesis_IO_Helper::get_eb_info_global(), libMesh::Nemesis_IO_Helper::get_elem_cmap(), libMesh::Nemesis_IO_Helper::get_elem_map(), libMesh::MeshBase::get_info(), libMesh::DofMap::get_info(), libMesh::Nemesis_IO_Helper::get_init_global(), libMesh::Nemesis_IO_Helper::get_init_info(), libMesh::Nemesis_IO_Helper::get_loadbal_param(), libMesh::DofMap::get_local_constraints(), libMesh::Nemesis_IO_Helper::get_node_cmap(), libMesh::Nemesis_IO_Helper::get_node_map(), libMesh::Nemesis_IO_Helper::get_ns_param_global(), libMesh::Nemesis_IO_Helper::get_ss_param_global(), libMesh::SparsityPattern::Build::handle_vi_vj(), libMesh::LaplaceMeshSmoother::init(), libMesh::SystemSubsetBySubdomain::init(), libMesh::PetscDMWrapper::init_and_attach_petscdm(), HeatSystem::init_data(), libMesh::ExodusII_IO_Helper::initialize(), libMesh::ExodusII_IO_Helper::initialize_element_variables(), libMesh::ExodusII_IO_Helper::initialize_global_variables(), libMesh::ExodusII_IO_Helper::initialize_nodal_variables(), libMesh::DistributedMesh::insert_elem(), libMesh::DofMap::is_evaluable(), libMesh::SparsityPattern::Build::join(), libMesh::TransientRBEvaluation::legacy_write_offline_data_to_files(), libMesh::RBSCMEvaluation::legacy_write_offline_data_to_files(), libMesh::RBEvaluation::legacy_write_offline_data_to_files(), libMesh::MeshTools::libmesh_assert_consistent_distributed(), libMesh::MeshTools::libmesh_assert_consistent_distributed_nodes(), libMesh::MeshTools::libmesh_assert_contiguous_dof_ids(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Elem >(), libMesh::MeshTools::libmesh_assert_valid_neighbors(), libMesh::DistributedMesh::libmesh_assert_valid_parallel_object_ids(), libMesh::DofMap::local_variable_indices(), main(), libMesh::MeshRefinement::make_coarsening_compatible(), AugmentSparsityOnInterface::mesh_reinit(), libMesh::TriangulatorInterface::MeshedHole::MeshedHole(), libMesh::MeshBase::n_active_local_elem(), libMesh::BoundaryInfo::n_boundary_conds(), libMesh::BoundaryInfo::n_edge_conds(), libMesh::DofMap::n_local_dofs(), libMesh::System::n_local_dofs(), libMesh::MeshBase::n_local_elem(), libMesh::MeshBase::n_local_nodes(), libMesh::BoundaryInfo::n_nodeset_conds(), libMesh::BoundaryInfo::n_shellface_conds(), libMesh::RBEIMEvaluation::node_gather_bfs(), libMesh::SparsityPattern::Build::operator()(), libMesh::DistributedMesh::own_node(), libMesh::BoundaryInfo::parallel_sync_node_ids(), libMesh::BoundaryInfo::parallel_sync_side_ids(), libMesh::System::point_gradient(), libMesh::System::point_hessian(), libMesh::System::point_value(), libMesh::DofMap::print_dof_constraints(), libMesh::DofMap::process_mesh_constraint_rows(), libMesh::Nemesis_IO_Helper::put_cmap_params(), libMesh::Nemesis_IO_Helper::put_elem_cmap(), libMesh::Nemesis_IO_Helper::put_elem_map(), libMesh::Nemesis_IO_Helper::put_loadbal_param(), libMesh::Nemesis_IO_Helper::put_node_cmap(), libMesh::Nemesis_IO_Helper::put_node_map(), libMesh::NameBasedIO::read(), libMesh::Nemesis_IO::read(), libMesh::XdrIO::read(), libMesh::CheckpointIO::read(), libMesh::EquationSystems::read(), libMesh::ExodusII_IO_Helper::read_elem_num_map(), libMesh::ExodusII_IO_Helper::read_global_values(), libMesh::ExodusII_IO::read_header(), libMesh::CheckpointIO::read_header(), libMesh::XdrIO::read_header(), libMesh::System::read_header(), libMesh::System::read_legacy_data(), libMesh::DynaIO::read_mesh(), libMesh::ExodusII_IO_Helper::read_node_num_map(), libMesh::System::read_parallel_data(), libMesh::TransientRBConstruction::read_riesz_representors_from_files(), libMesh::RBConstruction::read_riesz_representors_from_files(), libMesh::System::read_SCALAR_dofs(), libMesh::XdrIO::read_serialized_bc_names(), libMesh::XdrIO::read_serialized_bcs_helper(), libMesh::System::read_serialized_blocked_dof_objects(), libMesh::XdrIO::read_serialized_connectivity(), libMesh::System::read_serialized_data(), libMesh::XdrIO::read_serialized_nodes(), libMesh::XdrIO::read_serialized_nodesets(), libMesh::XdrIO::read_serialized_subdomain_names(), libMesh::System::read_serialized_vector(), libMesh::System::read_serialized_vectors(), libMesh::Nemesis_IO_Helper::read_var_names_impl(), libMesh::DistributedMesh::renumber_dof_objects(), libMesh::DistributedMesh::renumber_nodes_and_elements(), libMesh::DofMap::scatter_constraints(), libMesh::CheckpointIO::select_split_config(), libMesh::DistributedMesh::set_next_unique_id(), libMesh::DofMap::set_nonlocal_dof_objects(), libMesh::PetscDMWrapper::set_point_range_in_section(), libMesh::RBEIMEvaluation::side_gather_bfs(), ExodusTest< elem_type >::test_read_gold(), ExodusTest< elem_type >::test_write(), MeshInputTest::testAbaqusRead(), MeshInputTest::testCopyElementSolutionImpl(), MeshInputTest::testCopyElementVectorImpl(), MeshInputTest::testCopyNodalSolutionImpl(), DefaultCouplingTest::testCoupling(), PointNeighborCouplingTest::testCoupling(), MeshInputTest::testDynaFileMappings(), MeshInputTest::testDynaNoSplines(), MeshInputTest::testDynaReadElem(), MeshInputTest::testDynaReadPatch(), MeshInputTest::testExodusFileMappings(), MeshInputTest::testExodusIGASidesets(), MeshInputTest::testExodusWriteElementDataFromDiscontinuousNodalData(), MeshInputTest::testLowOrderEdgeBlocks(), SystemsTest::testProjectMatrix1D(), SystemsTest::testProjectMatrix2D(), SystemsTest::testProjectMatrix3D(), BoundaryInfoTest::testShellFaceConstraints(), MeshInputTest::testSingleElementImpl(), WriteVecAndScalar::testSolution(), CheckpointIOTest::testSplitter(), MeshInputTest::testTetgenIO(), libMesh::MeshTools::total_weight(), libMesh::MeshRefinement::uniformly_coarsen(), libMesh::DistributedMesh::update_parallel_id_counts(), libMesh::DTKAdapter::update_variable_values(), libMesh::NameBasedIO::write(), libMesh::XdrIO::write(), libMesh::CheckpointIO::write(), libMesh::EquationSystems::write(), libMesh::GMVIO::write_discontinuous_gmv(), libMesh::ExodusII_IO::write_element_data(), libMesh::ExodusII_IO_Helper::write_element_values(), libMesh::ExodusII_IO_Helper::write_element_values_element_major(), libMesh::ExodusII_IO_Helper::write_elements(), libMesh::ExodusII_IO_Helper::write_elemset_data(), libMesh::ExodusII_IO_Helper::write_elemsets(), libMesh::ExodusII_IO::write_global_data(), libMesh::ExodusII_IO_Helper::write_global_values(), libMesh::System::write_header(), libMesh::ExodusII_IO::write_information_records(), libMesh::ExodusII_IO_Helper::write_information_records(), libMesh::ExodusII_IO_Helper::write_nodal_coordinates(), libMesh::UCDIO::write_nodal_data(), libMesh::VTKIO::write_nodal_data(), libMesh::ExodusII_IO::write_nodal_data(), libMesh::ExodusII_IO::write_nodal_data_common(), libMesh::ExodusII_IO::write_nodal_data_discontinuous(), libMesh::ExodusII_IO_Helper::write_nodal_values(), libMesh::ExodusII_IO_Helper::write_nodeset_data(), libMesh::Nemesis_IO_Helper::write_nodesets(), libMesh::ExodusII_IO_Helper::write_nodesets(), libMesh::RBEIMEvaluation::write_out_interior_basis_functions(), libMesh::RBEIMEvaluation::write_out_node_basis_functions(), libMesh::RBEIMEvaluation::write_out_side_basis_functions(), write_output_solvedata(), libMesh::System::write_parallel_data(), libMesh::RBConstruction::write_riesz_representors_to_files(), libMesh::System::write_SCALAR_dofs(), libMesh::XdrIO::write_serialized_bc_names(), libMesh::XdrIO::write_serialized_bcs_helper(), libMesh::System::write_serialized_blocked_dof_objects(), libMesh::XdrIO::write_serialized_connectivity(), libMesh::System::write_serialized_data(), libMesh::XdrIO::write_serialized_nodes(), libMesh::XdrIO::write_serialized_nodesets(), libMesh::XdrIO::write_serialized_subdomain_names(), libMesh::System::write_serialized_vector(), libMesh::System::write_serialized_vectors(), libMesh::ExodusII_IO_Helper::write_sideset_data(), libMesh::Nemesis_IO_Helper::write_sidesets(), libMesh::ExodusII_IO_Helper::write_sidesets(), libMesh::ExodusII_IO::write_timestep(), libMesh::ExodusII_IO_Helper::write_timestep(), and libMesh::ExodusII_IO::write_timestep_discontinuous().
|
inherited |
Definition at line 416 of file numeric_vector.C.
Referenced by libMesh::NumericVector< Number >::add_vector(), libMesh::NumericVector< Number >::compatible(), and libMesh::NumericVector< Number >::insert().
|
overridevirtual |
Computes the component-wise reciprocal, \( u_i \leftarrow \frac{1}{u_i} \, \forall i\).
Implements libMesh::NumericVector< T >.
Definition at line 159 of file laspack_vector.C.
|
overridevirtual |
Scale each element of the vector by the given factor
.
Implements libMesh::NumericVector< T >.
Definition at line 290 of file laspack_vector.C.
References libMesh::initialized(), and libMesh::libmesh_assert().
|
inlineoverridevirtual |
Sets v(i) = value
.
Note that library implementations of this method are thread safe, e.g. we will lock _numeric_vector_mutex
before writing to the vector
Implements libMesh::NumericVector< T >.
Definition at line 502 of file laspack_vector.h.
References libMesh::initialized(), libMesh::libmesh_assert(), and value.
|
inlineoverridevirtual |
Implements libMesh::NumericVector< T >.
Definition at line 458 of file laspack_vector.h.
References libMesh::initialized(), and libMesh::libmesh_assert().
Referenced by libMesh::LaspackVector< T >::add(), and libMesh::LaspackVector< T >::operator=().
|
virtualinherited |
Definition at line 306 of file numeric_vector.C.
Referenced by libMesh::System::discrete_var_norm().
|
virtualinherited |
Definition at line 323 of file numeric_vector.C.
Referenced by libMesh::System::discrete_var_norm().
|
virtualinherited |
Definition at line 340 of file numeric_vector.C.
Referenced by libMesh::System::discrete_var_norm().
|
overridevirtual |
Implements libMesh::NumericVector< T >.
Definition at line 37 of file laspack_vector.C.
References libMesh::closed(), and libMesh::libmesh_assert().
|
inlineoverridevirtual |
Swaps the contents of this with v
.
There should be enough indirection in subclasses to make this an O(1) header-swap operation.
Reimplemented from libMesh::NumericVector< T >.
Definition at line 550 of file laspack_vector.h.
|
inlineinherited |
Definition at line 153 of file numeric_vector.h.
Referenced by libMesh::System::add_vector(), libMesh::DofMap::constrain_element_residual(), libMesh::EpetraVector< T >::EpetraVector(), libMesh::MeshFunction::find_element(), libMesh::MeshFunction::find_elements(), libMesh::DofMap::heterogeneously_constrain_element_jacobian_and_residual(), libMesh::DofMap::heterogeneously_constrain_element_residual(), libMesh::DistributedVector< T >::init(), libMesh::LaspackVector< T >::init(), libMesh::EigenSparseVector< T >::init(), libMesh::EpetraVector< T >::init(), libMesh::PetscVector< libMesh::Number >::localize(), libMesh::System::project_vector(), and libMesh::System::read_serialized_vector().
|
inlineinherited |
Definition at line 158 of file numeric_vector.h.
|
inlineoverridevirtual |
Set all entries to zero.
Equivalent to v
= 0, but more obvious and faster.
Implements libMesh::NumericVector< T >.
Definition at line 418 of file laspack_vector.h.
References libMesh::closed(), libMesh::initialized(), and libMesh::libmesh_assert().
|
inlineoverridevirtual |
Implements libMesh::NumericVector< T >.
Definition at line 430 of file laspack_vector.h.
References libMesh::NumericVector< T >::init().
|
friend |
Make other Laspack datatypes friends.
Definition at line 247 of file laspack_vector.h.
|
protectedinherited |
Definition at line 120 of file parallel_object.h.
Referenced by libMesh::EquationSystems::build_parallel_elemental_solution_vector(), libMesh::EquationSystems::build_parallel_solution_vector(), libMesh::ParallelObject::comm(), libMesh::ParallelObject::n_processors(), libMesh::ParallelObject::operator=(), libMesh::ParallelObject::processor_id(), and libMesh::BoundaryInfo::regenerate_id_sets().
|
staticprotectedinherited |
Actually holds the data.
Definition at line 124 of file reference_counter.h.
Referenced by libMesh::ReferenceCounter::get_info().
|
staticprotectedinherited |
Flag to control whether reference count information is printed when print_info is called.
Definition at line 143 of file reference_counter.h.
Referenced by libMesh::ReferenceCounter::disable_print_counter_info(), libMesh::ReferenceCounter::enable_print_counter_info(), and libMesh::ReferenceCounter::print_info().
|
protectedinherited |
Flag which tracks whether the vector's values are consistent on all processors after insertion or addition of values has occurred on some or all processors.
Definition at line 770 of file numeric_vector.h.
Referenced by libMesh::NumericVector< Number >::closed(), libMesh::EpetraVector< T >::EpetraVector(), libMesh::DistributedVector< T >::localize(), and libMesh::DistributedVector< T >::operator=().
|
protectedinherited |
true
once init() has been called.
Definition at line 775 of file numeric_vector.h.
Referenced by libMesh::PetscVector< libMesh::Number >::create_subvector(), libMesh::EpetraVector< T >::EpetraVector(), libMesh::NumericVector< Number >::initialized(), libMesh::DistributedVector< T >::localize(), libMesh::DistributedVector< T >::operator=(), and libMesh::DistributedVector< T >::swap().
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staticprotectedinherited |
Mutual exclusion object to enable thread-safe reference counting.
Definition at line 137 of file reference_counter.h.
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staticprotectedinherited |
The number of objects.
Print the reference count information when the number returns to 0.
Definition at line 132 of file reference_counter.h.
Referenced by libMesh::ReferenceCounter::n_objects(), libMesh::ReferenceCounter::ReferenceCounter(), and libMesh::ReferenceCounter::~ReferenceCounter().
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protectedinherited |
Mutex for performing thread-safe operations.
Definition at line 785 of file numeric_vector.h.
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protectedinherited |
Type of vector.
Definition at line 780 of file numeric_vector.h.
Referenced by libMesh::DistributedVector< T >::DistributedVector(), libMesh::EigenSparseVector< T >::EigenSparseVector(), libMesh::EpetraVector< T >::EpetraVector(), libMesh::PetscVector< libMesh::Number >::init(), libMesh::LaspackVector< T >::LaspackVector(), and libMesh::NumericVector< Number >::type().
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private |
Actual Laspack vector datatype to hold vector entries.
Definition at line 242 of file laspack_vector.h.
Referenced by libMesh::LaspackVector< T >::add_vector(), libMesh::LaspackVector< T >::dot(), and libMesh::LaspackVector< T >::operator=().