ComputeNodalKernelJacobiansThread Class Reference

#include <ComputeNodalKernelJacobiansThread.h>

Inheritance diagram for ComputeNodalKernelJacobiansThread:

Public Member Functions
	ComputeNodalKernelJacobiansThread (FEProblemBase &fe_problem, MooseObjectTagWarehouse< NodalKernel > &nodal_kernels, const std::set< TagID > &tags)
	ComputeNodalKernelJacobiansThread (ComputeNodalKernelJacobiansThread &x, Threads::split split)
virtual void	pre () override
	Called before the node range loop. More...
virtual void	onNode (ConstNodeRange::const_iterator &node_it) override
	Called for each node. More...
void	join (const ComputeNodalKernelJacobiansThread &)
void	operator() (const ConstNodeRange &range)
virtual void	post ()
	Called after the node range loop. More...
virtual void	postNode (ConstNodeRange::const_iterator &node_it)
	Called after the node assembly is done (including surface assembling) More...
virtual void	caughtMooseException (MooseException &e)
	Called if a MooseException is caught anywhere during the computation. More...
virtual bool	keepGoing ()
	Whether or not the loop should continue. More...

Protected Attributes
FEProblemBase &	_fe_problem
AuxiliarySystem &	_aux_sys
const std::set< TagID > &	_tags
MooseObjectTagWarehouse< NodalKernel > &	_nodal_kernels
MooseObjectWarehouse< NodalKernel > *	_nkernel_warehouse
unsigned int	_num_cached
	Number of contributions cached up. More...
THREAD_ID	_tid

Detailed Description

Definition at line 30 of file ComputeNodalKernelJacobiansThread.h.

Constructor & Destructor Documentation

ComputeNodalKernelJacobiansThread() [1/2]

ComputeNodalKernelJacobiansThread::ComputeNodalKernelJacobiansThread	(	FEProblemBase &	fe_problem,
		MooseObjectTagWarehouse< NodalKernel > &	nodal_kernels,
		const std::set< TagID > &	tags
	)

Definition at line 22 of file ComputeNodalKernelJacobiansThread.C.

  : ThreadedNodeLoop<ConstNodeRange, ConstNodeRange::const_iterator>(fe_problem),
    _fe_problem(fe_problem),
    _aux_sys(fe_problem.getAuxiliarySystem()),
    _tags(tags),
    _nodal_kernels(nodal_kernels),
    _num_cached(0)
{
}

ComputeNodalKernelJacobiansThread() [2/2]

ComputeNodalKernelJacobiansThread::ComputeNodalKernelJacobiansThread	(	ComputeNodalKernelJacobiansThread &	x,
		Threads::split	split
	)

Definition at line 36 of file ComputeNodalKernelJacobiansThread.C.

  : ThreadedNodeLoop<ConstNodeRange, ConstNodeRange::const_iterator>(x, split),
    _fe_problem(x._fe_problem),
    _aux_sys(x._aux_sys),
    _tags(x._tags),
    _nodal_kernels(x._nodal_kernels),
    _num_cached(0)
{
}

Member Function Documentation

caughtMooseException()

virtual void ThreadedNodeLoop< ConstNodeRange , ConstNodeRange::const_iterator >::caughtMooseException ( MooseException &  e )

inlinevirtualinherited

Called if a MooseException is caught anywhere during the computation.

The single input parameter taken is a MooseException object.

Definition at line 55 of file ThreadedNodeLoop.h.

  {
    std::string what(e.what());
    _fe_problem.setException(what);
  };

join()

void ComputeNodalKernelJacobiansThread::join

(

const ComputeNodalKernelJacobiansThread &

)

Definition at line 139 of file ComputeNodalKernelJacobiansThread.C.

{
}

keepGoing()

virtual bool ThreadedNodeLoop< ConstNodeRange , ConstNodeRange::const_iterator >::keepGoing ( )

inlinevirtualinherited

Whether or not the loop should continue.

Returns

true to keep going, false to stop.

Definition at line 66 of file ThreadedNodeLoop.h.

{ return !_fe_problem.hasException(); }

onNode()

void ComputeNodalKernelJacobiansThread::onNode ( ConstNodeRange::const_iterator &  node_it )

overridevirtual

Called for each node.

Reimplemented from ThreadedNodeLoop< ConstNodeRange, ConstNodeRange::const_iterator >.

Definition at line 61 of file ComputeNodalKernelJacobiansThread.C.

{
  const Node * node = *node_it;

  std::vector<std::pair<MooseVariableFEBase *, MooseVariableFEBase *>> & ce =
      _fe_problem.couplingEntries(_tid);
  for (const auto & it : ce)
  {
    MooseVariableFEBase & ivariable = *(it.first);
    MooseVariableFEBase & jvariable = *(it.second);

    unsigned int ivar = ivariable.number();
    unsigned int jvar = jvariable.number();

    // The NodalKernels that are active and are coupled to the jvar in question
    std::vector<std::shared_ptr<NodalKernel>> active_involved_kernels;

    const std::set<SubdomainID> & block_ids = _aux_sys.mesh().getNodeBlockIds(*node);
    for (const auto & block : block_ids)
    {
      if (_nkernel_warehouse->hasActiveBlockObjects(block, _tid))
      {
        // Loop over each NodalKernel to see if it's involved with the jvar
        const auto & objects = _nkernel_warehouse->getActiveBlockObjects(block, _tid);
        for (const auto & nodal_kernel : objects)
        {
          if (nodal_kernel->variable().number() == ivar)
          {
            // If this NodalKernel is acting on the jvar add it to the list and short-circuit the
            // loop
            if (nodal_kernel->variable().number() == jvar)
            {
              active_involved_kernels.push_back(nodal_kernel);
              continue;
            }

            // See if this NodalKernel is coupled to the jvar
            const std::vector<MooseVariableFEBase *> & coupled_vars =
                nodal_kernel->getCoupledMooseVars();
            for (const auto & var : coupled_vars)
              if (var->number() == jvar)
              {
                active_involved_kernels.push_back(nodal_kernel);
                break; // It only takes one
              }
          }
        }
      }
    }

    // Did we find any NodalKernels coupled to this jvar?
    if (!active_involved_kernels.empty())
    {
      // prepare variables
      for (const auto & it : _aux_sys._nodal_vars[_tid])
      {
        MooseVariable * var = it.second;
        var->prepareAux();
      }

      _fe_problem.reinitNode(node, _tid);

      for (const auto & nodal_kernel : active_involved_kernels)
        nodal_kernel->computeOffDiagJacobian(jvar);

      _num_cached++;

      if (_num_cached == 20) // Cache 20 nodes worth before adding into the residual
      {
        _num_cached = 0;
        Threads::spin_mutex::scoped_lock lock(Threads::spin_mtx);
        _fe_problem.assembly(_tid).addCachedJacobianContributions();
      }
    }
  }
}

operator()()

void ThreadedNodeLoop< ConstNodeRange , ConstNodeRange::const_iterator >::operator() ( const ConstNodeRange &  range )

inherited

Definition at line 88 of file ThreadedNodeLoop.h.

{
  try
  {
    ParallelUniqueId puid;
    _tid = puid.id;

    pre();

    for (IteratorType nd = range.begin(); nd != range.end(); ++nd)
    {
      if (!keepGoing())
        break;

      onNode(nd);

      postNode(nd);
    }

    post();
  }
  catch (MooseException & e)
  {
    caughtMooseException(e);
  }
}

post()

void ThreadedNodeLoop< ConstNodeRange , ConstNodeRange::const_iterator >::post ( )

virtualinherited

Called after the node range loop.

Reimplemented in ComputeNodalAuxVarsThread.

Definition at line 123 of file ThreadedNodeLoop.h.

{
}

postNode()

void ThreadedNodeLoop< ConstNodeRange , ConstNodeRange::const_iterator >::postNode ( ConstNodeRange::const_iterator &  node_it )

virtualinherited

Called after the node assembly is done (including surface assembling)

Parameters

node	- active node

Definition at line 135 of file ThreadedNodeLoop.h.

{
}

pre()

void ComputeNodalKernelJacobiansThread::pre ( )

overridevirtual

Called before the node range loop.

Reimplemented from ThreadedNodeLoop< ConstNodeRange, ConstNodeRange::const_iterator >.

Definition at line 48 of file ComputeNodalKernelJacobiansThread.C.

{
  _num_cached = 0;

  if (!_tags.size() || _tags.size() == _fe_problem.numMatrixTags())
    _nkernel_warehouse = &_nodal_kernels;
  else if (_tags.size() == 1)
    _nkernel_warehouse = &(_nodal_kernels.getMatrixTagObjectWarehouse(*(_tags.begin()), _tid));
  else
    _nkernel_warehouse = &(_nodal_kernels.getMatrixTagsObjectWarehouse(_tags, _tid));
}

Member Data Documentation

_aux_sys

AuxiliarySystem& ComputeNodalKernelJacobiansThread::_aux_sys

protected

Definition at line 50 of file ComputeNodalKernelJacobiansThread.h.

Referenced by onNode().

_fe_problem

FEProblemBase& ComputeNodalKernelJacobiansThread::_fe_problem

protected

Definition at line 48 of file ComputeNodalKernelJacobiansThread.h.

Referenced by onNode(), and pre().

_nkernel_warehouse

MooseObjectWarehouse<NodalKernel>* ComputeNodalKernelJacobiansThread::_nkernel_warehouse

protected

Definition at line 56 of file ComputeNodalKernelJacobiansThread.h.

Referenced by onNode(), and pre().

_nodal_kernels

MooseObjectTagWarehouse<NodalKernel>& ComputeNodalKernelJacobiansThread::_nodal_kernels

protected

Definition at line 54 of file ComputeNodalKernelJacobiansThread.h.

Referenced by pre().

_num_cached

unsigned int ComputeNodalKernelJacobiansThread::_num_cached

protected

Number of contributions cached up.

Definition at line 59 of file ComputeNodalKernelJacobiansThread.h.

Referenced by onNode(), and pre().

_tags

const std::set<TagID>& ComputeNodalKernelJacobiansThread::_tags

protected

Definition at line 52 of file ComputeNodalKernelJacobiansThread.h.

Referenced by pre().

_tid

THREAD_ID ThreadedNodeLoop< ConstNodeRange , ConstNodeRange::const_iterator >::_tid

protectedinherited

Definition at line 70 of file ThreadedNodeLoop.h.

Referenced by ComputeNodalUserObjectsThread::onNode(), ComputeNodalAuxVarsThread::onNode(), ComputeNodalDampingThread::onNode(), ComputeNodalKernelsThread::onNode(), onNode(), ComputeNodalAuxVarsThread::post(), ComputeNodalKernelsThread::pre(), pre(), and ComputeNodalAuxVarsThread::subdomainChanged().

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The documentation for this class was generated from the following files:

• include/loops/ComputeNodalKernelJacobiansThread.h
• src/loops/ComputeNodalKernelJacobiansThread.C