ComputeElemAuxVarsThread< AuxKernelType > Class Template Reference

#include <ComputeElemAuxVarsThread.h>

Inheritance diagram for ComputeElemAuxVarsThread< AuxKernelType >:

Public Member Functions
	ComputeElemAuxVarsThread (FEProblemBase &problem, const MooseObjectWarehouse< AuxKernelType > &storage, bool need_materials)
	ComputeElemAuxVarsThread (ComputeElemAuxVarsThread &x, Threads::split split)
virtual	~ComputeElemAuxVarsThread ()
virtual void	subdomainChanged () override
	Called every time the current subdomain changes (i.e. More...
virtual void	onElement (const Elem *elem) override
	Assembly of the element (not including surface assembly) More...
virtual void	post () override
	Called after the element range loop. More...
void	join (const ComputeElemAuxVarsThread &)
virtual void	caughtMooseException (MooseException &e) override
	Called if a MooseException is caught anywhere during the computation. More...
virtual bool	keepGoing () override
	Whether or not the loop should continue. More...
virtual void	preElement (const Elem *elem) override
	Called before the element assembly. More...
virtual void	preInternalSide (const Elem *elem, unsigned int side) override
	Called before evaluations on an element internal side. More...
virtual void	preBoundary (const Elem *elem, unsigned int side, BoundaryID bnd_id, const Elem *lower_d_elem=nullptr) override
	Called before the boundary assembly. More...
virtual void	neighborSubdomainChanged () override
	Called every time the neighbor subdomain changes (i.e. More...
virtual void	operator() (const ConstElemRange &range, bool bypass_threading=false)
virtual void	pre ()
	Called before the element range loop. More...
virtual void	postElement (const Elem *elem)
	Called after the element assembly is done (including surface assembling) More...
virtual void	onBoundary (const Elem *elem, unsigned int side, BoundaryID bnd_id, const Elem *lower_d_elem=nullptr)
	Called when doing boundary assembling. More...
virtual void	postInternalSide (const Elem *elem, unsigned int side)
	Called after evaluations on an element internal side. More...
virtual void	onInternalSide (const Elem *elem, unsigned int side)
	Called when doing internal edge assembling. More...
virtual void	onExternalSide (const Elem *elem, unsigned int side)
	Called when iterating over external sides (no side neighbor) More...
virtual void	onInterface (const Elem *elem, unsigned int side, BoundaryID bnd_id)
	Called when doing interface assembling. More...

Protected Member Functions
void	printGeneralExecutionInformation () const override
	Print list of object types executed and in which order. More...
void	printBlockExecutionInformation () const override
	Print list of specific objects executed and in which order. More...
void	prepareElement (const Elem *elem)
void	clearVarsAndMaterials ()
void	printExecutionOrdering (const std::vector< T * > &objs, const bool print_header=true, const std::string &line_prefix="[DBG]") const
	Routine to output the ordering of objects within a vector of pointers to these objects. More...
void	printExecutionOrdering (const std::vector< std::shared_ptr< T >> &objs_ptrs, const bool print_header=true, const std::string &line_prefix="[DBG]") const
virtual void	printBoundaryExecutionInformation (const unsigned int) const
	Print information about the particular ordering of objects on each boundary. More...
void	resetExecPrintedSets () const
	Resets the set of blocks and boundaries visited. More...
virtual bool	shouldComputeInternalSide (const Elem &elem, const Elem &neighbor) const
	Whether to compute the internal side for the provided element-neighbor pair. More...

Protected Attributes
AuxiliarySystem &	_aux_sys
const MooseObjectWarehouse< AuxKernelType > &	_aux_kernels
	Storage object containing active AuxKernel objects. More...
bool	_need_materials
FEProblemBase &	_fe_problem
MooseMesh &	_mesh
THREAD_ID	_tid
SubdomainID	_subdomain
	The subdomain for the current element. More...
SubdomainID	_old_subdomain
	The subdomain for the last element. More...
SubdomainID	_neighbor_subdomain
	The subdomain for the current neighbor. More...
SubdomainID	_old_neighbor_subdomain
	The subdomain for the last neighbor. More...
std::set< SubdomainID >	_blocks_exec_printed
	Keep track of which blocks were visited. More...
std::set< BoundaryID >	_boundaries_exec_printed
	Keep track of which boundaries were visited. More...

Detailed Description

template<typename AuxKernelType>
class ComputeElemAuxVarsThread< AuxKernelType >

Definition at line 23 of file ComputeElemAuxVarsThread.h.

Constructor & Destructor Documentation

ComputeElemAuxVarsThread() [1/2]

template<typename AuxKernelType >

ComputeElemAuxVarsThread< AuxKernelType >::ComputeElemAuxVarsThread	(	FEProblemBase &	problem,
		const MooseObjectWarehouse< AuxKernelType > &	storage,
		bool	need_materials
	)

Definition at line 23 of file ComputeElemAuxVarsThread.C.

  : ThreadedElementLoop<ConstElemRange>(problem),
    _aux_sys(problem.getAuxiliarySystem()),
    _aux_kernels(storage),
    _need_materials(need_materials)
{
}

ComputeElemAuxVarsThread() [2/2]

template<typename AuxKernelType >

ComputeElemAuxVarsThread< AuxKernelType >::ComputeElemAuxVarsThread	(	ComputeElemAuxVarsThread< AuxKernelType > &	x,
		Threads::split	split
	)

Definition at line 36 of file ComputeElemAuxVarsThread.C.

  : ThreadedElementLoop<ConstElemRange>(x._fe_problem),
    _aux_sys(x._aux_sys),
    _aux_kernels(x._aux_kernels),
    _need_materials(x._need_materials)
{
}

~ComputeElemAuxVarsThread()

template<typename AuxKernelType >

ComputeElemAuxVarsThread< AuxKernelType >::~ComputeElemAuxVarsThread ( )

virtual

Definition at line 46 of file ComputeElemAuxVarsThread.C.

{
}

Member Function Documentation

caughtMooseException()

void ThreadedElementLoop< ConstElemRange >::caughtMooseException ( MooseException &  e )

overridevirtualinherited

Called if a MooseException is caught anywhere during the computation.

The single input parameter taken is a MooseException object.

Reimplemented from ThreadedElementLoopBase< ConstElemRange >.

Definition at line 105 of file ThreadedElementLoop.h.

Referenced by ComputeJacobianForScalingThread::operator()().

{
  Threads::spin_mutex::scoped_lock lock(threaded_element_mutex);

  std::string what(e.what());
  _fe_problem.setException(what);
}

clearVarsAndMaterials()

void ThreadedElementLoop< ConstElemRange >::clearVarsAndMaterials ( )

protectedinherited

Definition at line 195 of file ThreadedElementLoop.h.

Referenced by NonlinearThread::post().

{
  _fe_problem.clearActiveElementalMooseVariables(this->_tid);
  _fe_problem.clearActiveMaterialProperties(this->_tid);
}

join()

template<typename AuxKernelType >

void ComputeElemAuxVarsThread< AuxKernelType >::join

(

const ComputeElemAuxVarsThread< AuxKernelType > &

)

Definition at line 137 of file ComputeElemAuxVarsThread.C.

{
}

keepGoing()

virtual bool ThreadedElementLoop< ConstElemRange >::keepGoing ( )

inlineoverridevirtualinherited

Whether or not the loop should continue.

Returns

true to keep going, false to stop.

Reimplemented from ThreadedElementLoopBase< ConstElemRange >.

Definition at line 45 of file ThreadedElementLoop.h.

Referenced by ComputeJacobianForScalingThread::operator()().

{ return !_fe_problem.hasException(); }

neighborSubdomainChanged()

void ThreadedElementLoop< ConstElemRange >::neighborSubdomainChanged ( )

overridevirtualinherited

Called every time the neighbor subdomain changes (i.e.

the subdomain of this neighbor is not the same as the subdomain of the last neighbor). Beware of over-using this! You might think that you can do some expensive stuff in here and get away with it... but there are applications that have TONS of subdomains....

Reimplemented from ThreadedElementLoopBase< ConstElemRange >.

Definition at line 139 of file ThreadedElementLoop.h.

{
  _fe_problem.neighborSubdomainSetup(ThreadedElementLoopBase<RangeType>::_neighbor_subdomain,
                                     ThreadedElementLoopBase<RangeType>::_tid);
}

onBoundary()

void ThreadedElementLoopBase< ConstElemRange >::onBoundary ( const Elem *  elem, unsigned int  side, BoundaryID  bnd_id, const Elem *  lower_d_elem = nullptr  )

virtualinherited

Called when doing boundary assembling.

Parameters

elem	- The element we are checking is on the boundary.
side	- The side of the element in question.
bnd_id	- ID of the boundary we are at
lower_d_elem	- Lower dimensional element (e.g. Mortar)

Reimplemented in ComputeUserObjectsThread, NonlinearThread, ComputeIndicatorThread, ComputeMaterialsObjectThread, and ComputeMarkerThread.

Definition at line 376 of file ThreadedElementLoopBase.h.

{
}

onElement()

template<typename AuxKernelType >

void ComputeElemAuxVarsThread< AuxKernelType >::onElement ( const Elem *  elem )

overridevirtual

Assembly of the element (not including surface assembly)

Parameters

elem	- active element

Reimplemented from ThreadedElementLoopBase< ConstElemRange >.

Definition at line 91 of file ComputeElemAuxVarsThread.C.

{
  if (_aux_kernels.hasActiveBlockObjects(_subdomain, _tid))
  {
    const std::vector<std::shared_ptr<AuxKernelType>> & kernels =
        _aux_kernels.getActiveBlockObjects(_subdomain, _tid);
    _fe_problem.prepare(elem, _tid);
    _fe_problem.reinitElem(elem, _tid);

    // Set up the sentinel so that, even if reinitMaterials() throws, we
    // still remember to swap back.
    SwapBackSentinel sentinel(_fe_problem, &FEProblem::swapBackMaterials, _tid, _need_materials);

    if (_need_materials)
      _fe_problem.reinitMaterials(elem->subdomain_id(), _tid);

    for (const auto & aux : kernels)
    {
      aux->compute();
      aux->variable().insert(_aux_sys.solution());

      // update the aux solution vector if writable coupled variables are used
      if (aux->hasWritableCoupledVariables())
      {
        for (auto * var : aux->getWritableCoupledVariables())
          var->insert(_aux_sys.solution());

        _fe_problem.reinitElem(elem, _tid);
      }
    }
  }
}

onExternalSide()

void ThreadedElementLoopBase< ConstElemRange >::onExternalSide ( const Elem *  elem, unsigned int  side  )

virtualinherited

Called when iterating over external sides (no side neighbor)

Parameters

elem	- Element we are on
side	- local side number of the element 'elem'

Reimplemented in ComputeUserObjectsThread.

Definition at line 403 of file ThreadedElementLoopBase.h.

{
}

onInterface()

void ThreadedElementLoopBase< ConstElemRange >::onInterface ( const Elem *  elem, unsigned int  side, BoundaryID  bnd_id  )

virtualinherited

Called when doing interface assembling.

Parameters

elem	- Element we are on
side	- local side number of the element 'elem'
bnd_id	- ID of the interface we are at

Reimplemented in ComputeUserObjectsThread, NonlinearThread, and ComputeMaterialsObjectThread.

Definition at line 409 of file ThreadedElementLoopBase.h.

{
}

onInternalSide()

void ThreadedElementLoopBase< ConstElemRange >::onInternalSide ( const Elem *  elem, unsigned int  side  )

virtualinherited

Called when doing internal edge assembling.

Parameters

elem	- Element we are on
side	- local side number of the element 'elem'

Reimplemented in ComputeUserObjectsThread, NonlinearThread, ComputeIndicatorThread, ComputeMaterialsObjectThread, and ComputeMarkerThread.

Definition at line 397 of file ThreadedElementLoopBase.h.

{
}

operator()()

void ThreadedElementLoopBase< ConstElemRange >::operator() ( const ConstElemRange &  range, bool  bypass_threading = false  )

virtualinherited

Reimplemented in NonlinearThread, and ComputeJacobianForScalingThread.

Definition at line 226 of file ThreadedElementLoopBase.h.

{
  try
  {
    try
    {
      ParallelUniqueId puid;
      _tid = bypass_threading ? 0 : puid.id;

      pre();
      printGeneralExecutionInformation();

      _subdomain = Moose::INVALID_BLOCK_ID;
      _neighbor_subdomain = Moose::INVALID_BLOCK_ID;
      typename RangeType::const_iterator el = range.begin();
      for (el = range.begin(); el != range.end(); ++el)
      {
        if (!keepGoing())
          break;

        const Elem * elem = *el;

        preElement(elem);

        _old_subdomain = _subdomain;
        _subdomain = elem->subdomain_id();
        if (_subdomain != _old_subdomain)
        {
          subdomainChanged();
          printBlockExecutionInformation();
        }

        onElement(elem);

        if (_mesh.interiorLowerDBlocks().count(elem->subdomain_id()) > 0 ||
            _mesh.boundaryLowerDBlocks().count(elem->subdomain_id()) > 0)
        {
          postElement(elem);
          continue;
        }

        for (unsigned int side = 0; side < elem->n_sides(); side++)
        {
          std::vector<BoundaryID> boundary_ids = _mesh.getBoundaryIDs(elem, side);
          const Elem * lower_d_elem = _mesh.getLowerDElem(elem, side);

          if (boundary_ids.size() > 0)
            for (std::vector<BoundaryID>::iterator it = boundary_ids.begin();
                 it != boundary_ids.end();
                 ++it)
            {
              preBoundary(elem, side, *it, lower_d_elem);
              printBoundaryExecutionInformation(*it);
              onBoundary(elem, side, *it, lower_d_elem);
            }

          const Elem * neighbor = elem->neighbor_ptr(side);
          if (neighbor)
          {
            preInternalSide(elem, side);

            _old_neighbor_subdomain = _neighbor_subdomain;
            _neighbor_subdomain = neighbor->subdomain_id();
            if (_neighbor_subdomain != _old_neighbor_subdomain)
              neighborSubdomainChanged();

            if (shouldComputeInternalSide(*elem, *neighbor))
              onInternalSide(elem, side);

            if (boundary_ids.size() > 0)
              for (std::vector<BoundaryID>::iterator it = boundary_ids.begin();
                   it != boundary_ids.end();
                   ++it)
                onInterface(elem, side, *it);

            postInternalSide(elem, side);
          }
          else
            onExternalSide(elem, side);
        } // sides

        postElement(elem);
      } // range

      post();
      resetExecPrintedSets();
    }
    catch (MetaPhysicL::LogicError & e)
    {
      moose::translateMetaPhysicLError(e);
    }
    catch (std::exception & e)
    {
      // Continue if we find a libMesh degenerate map exception, but
      // just re-throw for any real error
      if (!strstr(e.what(), "Jacobian") && !strstr(e.what(), "singular") &&
          !strstr(e.what(), "det != 0"))
        throw; // not "throw e;" - that destroys type info!

      mooseException("We caught a libMesh degeneracy exception in ThreadedElementLoopBase:\n",
                     e.what());
    }
  }
  catch (MooseException & e)
  {
    caughtMooseException(e);
  }
}

post()

template<typename AuxKernelType >

void ComputeElemAuxVarsThread< AuxKernelType >::post ( )

overridevirtual

Called after the element range loop.

Reimplemented from ThreadedElementLoopBase< ConstElemRange >.

Definition at line 126 of file ComputeElemAuxVarsThread.C.

{
  _fe_problem.clearActiveElementalMooseVariables(_tid);
  _fe_problem.clearActiveMaterialProperties(_tid);

  _fe_problem.clearActiveFEVariableCoupleableVectorTags(_tid);
  _fe_problem.clearActiveFEVariableCoupleableMatrixTags(_tid);
}

postElement()

void ThreadedElementLoopBase< ConstElemRange >::postElement ( const Elem *  elem )

virtualinherited

Called after the element assembly is done (including surface assembling)

Parameters

elem	- active element

Reimplemented in ComputeJacobianBlocksThread, NonlinearThread, ComputeIndicatorThread, ComputeJacobianThread, and ComputeMarkerThread.

Definition at line 361 of file ThreadedElementLoopBase.h.

{
}

postInternalSide()

void ThreadedElementLoopBase< ConstElemRange >::postInternalSide ( const Elem *  elem, unsigned int  side  )

virtualinherited

Called after evaluations on an element internal side.

Parameters

elem	- Element we are on
side	- local side number of the element 'elem'

Reimplemented in ComputeJacobianBlocksThread.

Definition at line 391 of file ThreadedElementLoopBase.h.

{
}

pre()

void ThreadedElementLoopBase< ConstElemRange >::pre ( )

virtualinherited

Called before the element range loop.

Definition at line 337 of file ThreadedElementLoopBase.h.

Referenced by ComputeJacobianForScalingThread::operator()().

{
}

preBoundary()

void ThreadedElementLoop< ConstElemRange >::preBoundary ( const Elem *  elem, unsigned int  side, BoundaryID  bnd_id, const Elem *  lower_d_elem = nullptr  )

overridevirtualinherited

Called before the boundary assembly.

Parameters

elem	- The element we are checking is on the boundary.
side	- The side of the element in question.
bnd_id	- ID of the boundary we are at
lower_d_elem	- Lower dimensional element (e.g. Mortar)

Reimplemented from ThreadedElementLoopBase< ConstElemRange >.

Definition at line 129 of file ThreadedElementLoop.h.

{
  _fe_problem.setCurrentBoundaryID(bnd_id, ThreadedElementLoopBase<RangeType>::_tid);
}

preElement()

void ThreadedElementLoop< ConstElemRange >::preElement ( const Elem *  elem )

overridevirtualinherited

Called before the element assembly.

Parameters

elem	- active element

Reimplemented from ThreadedElementLoopBase< ConstElemRange >.

Definition at line 115 of file ThreadedElementLoop.h.

Referenced by ComputeJacobianForScalingThread::operator()().

{
  _fe_problem.setCurrentSubdomainID(el, ThreadedElementLoopBase<RangeType>::_tid);
}

preInternalSide()

void ThreadedElementLoop< ConstElemRange >::preInternalSide ( const Elem *  elem, unsigned int  side  )

overridevirtualinherited

Called before evaluations on an element internal side.

Parameters

elem	- Element we are on
side	- local side number of the element 'elem'

Reimplemented from ThreadedElementLoopBase< ConstElemRange >.

Definition at line 122 of file ThreadedElementLoop.h.

{
  _fe_problem.setNeighborSubdomainID(el, side, ThreadedElementLoopBase<RangeType>::_tid);
}

prepareElement()

void ThreadedElementLoop< ConstElemRange >::prepareElement ( const Elem *  elem )

protectedinherited

Definition at line 186 of file ThreadedElementLoop.h.

Referenced by NonlinearThread::onElement().

{
  _fe_problem.prepare(elem, this->_tid);
  _fe_problem.reinitElem(elem, this->_tid);
  _fe_problem.reinitMaterials(this->_subdomain, this->_tid);
}

printBlockExecutionInformation()

template<typename AuxKernelType >

void ComputeElemAuxVarsThread< AuxKernelType >::printBlockExecutionInformation ( ) const

overrideprotectedvirtual

Print list of specific objects executed and in which order.

Reimplemented from ThreadedElementLoopBase< ConstElemRange >.

Definition at line 155 of file ComputeElemAuxVarsThread.C.

{
  if (!_fe_problem.shouldPrintExecution(_tid) || _blocks_exec_printed.count(_subdomain) ||
      !_aux_kernels.hasActiveBlockObjects(_subdomain, _tid))
    return;

  const auto & console = _fe_problem.console();
  const auto & kernels = _aux_kernels.getActiveBlockObjects(_subdomain, _tid);
  console << "[DBG] Ordering of AuxKernels on block " << _subdomain << std::endl;
  printExecutionOrdering<AuxKernelType>(kernels, false);
  _blocks_exec_printed.insert(_subdomain);
}

printBoundaryExecutionInformation()

virtual void ThreadedElementLoopBase< ConstElemRange >::printBoundaryExecutionInformation ( const unsigned int  ) const

inlineprotectedvirtualinherited

Print information about the particular ordering of objects on each boundary.

Reimplemented in NonlinearThread.

Definition at line 187 of file ThreadedElementLoopBase.h.

{}

printExecutionOrdering() [1/2]

void ThreadedElementLoop< ConstElemRange >::printExecutionOrdering ( const std::vector< T *> &  objs, const bool  print_header = true, const std::string &  line_prefix = "[DBG]"  ) const

protectedinherited

Routine to output the ordering of objects within a vector of pointers to these objects.

These objects must implement the name() routine, and it must return a string or compatible type.

Template Parameters

T	the object type

Parameters

objs	the vector with all the objects (should be pointers)
objects_type	the name of the type of objects. Defaults to the CPP object name
print_header	whether to print a header about the timing of execution and the type of objects

Definition at line 148 of file ThreadedElementLoop.h.

{
  if (!objs.size())
    return;

  auto & console = _fe_problem.console();
  const auto objects_type = MooseUtils::prettyCppType(objs[0]);
  std::vector<MooseObject *> moose_objs;
  for (auto obj_ptr : objs)
    moose_objs.push_back(dynamic_cast<MooseObject *>(obj_ptr));
  const auto names = ConsoleUtils::mooseObjectVectorToString(moose_objs);

  // Print string with a DBG prefix and with sufficient line breaks
  std::string message = print_header ? "Executing " + objects_type + " on " +
                                           _fe_problem.getCurrentExecuteOnFlag().name() + "\n"
                                     : "";
  message += (print_header ? "Order of execution:\n" : "") + names;
  console << ConsoleUtils::formatString(message, line_prefix) << std::endl;
}

printExecutionOrdering() [2/2]

void ThreadedElementLoop< ConstElemRange >::printExecutionOrdering ( const std::vector< std::shared_ptr< T >> &  objs_ptrs, const bool  print_header = true, const std::string &  line_prefix = "[DBG]"  ) const

protectedinherited

Definition at line 173 of file ThreadedElementLoop.h.

{
  std::vector<T *> regular_ptrs;
  for (auto shared_ptr : objs_ptrs)
    regular_ptrs.push_back(shared_ptr.get());
  printExecutionOrdering<T>(regular_ptrs, print_header, line_prefix);
}

printGeneralExecutionInformation()

template<typename AuxKernelType >

void ComputeElemAuxVarsThread< AuxKernelType >::printGeneralExecutionInformation ( ) const

overrideprotectedvirtual

Print list of object types executed and in which order.

Reimplemented from ThreadedElementLoopBase< ConstElemRange >.

Definition at line 143 of file ComputeElemAuxVarsThread.C.

{
  if (!_fe_problem.shouldPrintExecution(_tid) || !_aux_kernels.hasActiveObjects())
    return;

  const auto & console = _fe_problem.console();
  const auto & execute_on = _fe_problem.getCurrentExecuteOnFlag();
  console << "[DBG] Executing auxiliary kernels on elements on " << execute_on << std::endl;
}

resetExecPrintedSets()

void ThreadedElementLoopBase< ConstElemRange >::resetExecPrintedSets ( ) const

protectedinherited

Resets the set of blocks and boundaries visited.

Definition at line 454 of file ThreadedElementLoopBase.h.

{
  _blocks_exec_printed.clear();
  _boundaries_exec_printed.clear();
}

shouldComputeInternalSide()

bool ThreadedElementLoopBase< ConstElemRange >::shouldComputeInternalSide ( const Elem &  elem, const Elem &  neighbor  ) const

protectedvirtualinherited

Whether to compute the internal side for the provided element-neighbor pair.

Typically this will return true if the element id is less than the neighbor id when the elements are equal level, or when the element is more refined than the neighbor, and then false otherwise. One type of loop where the logic will be different is when projecting stateful material properties

Reimplemented in NonlinearThread, and FlagElementsThread.

Definition at line 429 of file ThreadedElementLoopBase.h.

{
  auto level = [this](const auto & elem_arg)
  {
    if (_mesh.doingPRefinement())
      return elem_arg.p_level();
    else
      return elem_arg.level();
  };
  const auto elem_id = elem.id(), neighbor_id = neighbor.id();
  const auto elem_level = level(elem), neighbor_level = level(neighbor);

  // When looping over elements and then sides, we need to make sure that we do not duplicate
  // effort, e.g. if a face is shared by element 1 and element 2, then we do not want to do compute
  // work both when we are visiting element 1 *and* then later when visiting element 2. Our rule is
  // to only compute when we are visiting the element that has the lower element id when element and
  // neighbor are of the same adaptivity level, and then if they are not of the same level, then
  // we only compute when we are visiting the finer element
  return (neighbor.active() && (neighbor_level == elem_level) && (elem_id < neighbor_id)) ||
         (neighbor_level < elem_level);
}

subdomainChanged()

template<typename AuxKernelType >

void ComputeElemAuxVarsThread< AuxKernelType >::subdomainChanged ( )

overridevirtual

Called every time the current subdomain changes (i.e.

the subdomain of this element is not the same as the subdomain of the last element). Beware of over-using this! You might think that you can do some expensive stuff in here and get away with it... but there are applications that have TONS of subdomains....

Reimplemented from ThreadedElementLoopBase< ConstElemRange >.

Definition at line 52 of file ComputeElemAuxVarsThread.C.

{
  _fe_problem.subdomainSetup(_subdomain, _tid);

  std::set<MooseVariableFEBase *> needed_moose_vars;
  std::unordered_set<unsigned int> needed_mat_props;
  std::set<TagID> needed_fe_var_matrix_tags;
  std::set<TagID> needed_fe_var_vector_tags;

  _fe_problem.getMaterialWarehouse().updateBlockFEVariableCoupledVectorTagDependency(
      _subdomain, needed_fe_var_vector_tags, _tid);
  if (_aux_kernels.hasActiveBlockObjects(_subdomain, _tid))
  {
    const std::vector<std::shared_ptr<AuxKernelType>> & kernels =
        _aux_kernels.getActiveBlockObjects(_subdomain, _tid);
    for (const auto & aux : kernels)
    {
      aux->subdomainSetup();
      const auto & mv_deps = aux->getMooseVariableDependencies();
      const auto & mp_deps = aux->getMatPropDependencies();
      needed_moose_vars.insert(mv_deps.begin(), mv_deps.end());
      needed_mat_props.insert(mp_deps.begin(), mp_deps.end());

      auto & fe_var_coup_vtags = aux->getFEVariableCoupleableVectorTags();
      needed_fe_var_vector_tags.insert(fe_var_coup_vtags.begin(), fe_var_coup_vtags.end());

      auto & fe_var_coup_mtags = aux->getFEVariableCoupleableMatrixTags();
      needed_fe_var_matrix_tags.insert(fe_var_coup_mtags.begin(), fe_var_coup_mtags.end());
    }
  }

  _fe_problem.setActiveElementalMooseVariables(needed_moose_vars, _tid);
  _fe_problem.prepareMaterials(needed_mat_props, _subdomain, _tid);
  _fe_problem.setActiveFEVariableCoupleableMatrixTags(needed_fe_var_matrix_tags, _tid);
  _fe_problem.setActiveFEVariableCoupleableVectorTags(needed_fe_var_vector_tags, _tid);
}

Member Data Documentation

_aux_kernels

template<typename AuxKernelType>

const MooseObjectWarehouse<AuxKernelType>& ComputeElemAuxVarsThread< AuxKernelType >::_aux_kernels

protected

Storage object containing active AuxKernel objects.

Definition at line 50 of file ComputeElemAuxVarsThread.h.

_aux_sys

template<typename AuxKernelType>

AuxiliarySystem& ComputeElemAuxVarsThread< AuxKernelType >::_aux_sys

protected

Definition at line 47 of file ComputeElemAuxVarsThread.h.

_blocks_exec_printed

std::set<SubdomainID> ThreadedElementLoopBase< ConstElemRange >::_blocks_exec_printed

mutableprotectedinherited

Keep track of which blocks were visited.

Definition at line 190 of file ThreadedElementLoopBase.h.

Referenced by ComputeMarkerThread::printBlockExecutionInformation(), ComputeIndicatorThread::printBlockExecutionInformation(), ComputeUserObjectsThread::printBlockExecutionInformation(), and NonlinearThread::printBlockExecutionInformation().

_boundaries_exec_printed

std::set<BoundaryID> ThreadedElementLoopBase< ConstElemRange >::_boundaries_exec_printed

mutableprotectedinherited

Keep track of which boundaries were visited.

Definition at line 193 of file ThreadedElementLoopBase.h.

Referenced by NonlinearThread::printBoundaryExecutionInformation().

_fe_problem

FEProblemBase& ThreadedElementLoop< ConstElemRange >::_fe_problem

protectedinherited

Definition at line 62 of file ThreadedElementLoop.h.

Referenced by ComputeResidualThread::accumulate(), ComputeResidualAndJacobianThread::accumulate(), ComputeResidualThread::accumulateLower(), ComputeResidualAndJacobianThread::accumulateLower(), ComputeJacobianThread::accumulateLower(), ComputeResidualThread::accumulateNeighbor(), ComputeResidualAndJacobianThread::accumulateNeighbor(), ComputeJacobianThread::accumulateNeighbor(), ComputeResidualThread::accumulateNeighborLower(), ComputeResidualAndJacobianThread::accumulateNeighborLower(), ComputeJacobianThread::accumulateNeighborLower(), ComputeJacobianThread::compute(), ComputeFullJacobianThread::computeOnBoundary(), ComputeFullJacobianThread::computeOnElement(), NonlinearThread::computeOnElement(), ComputeFullJacobianThread::computeOnInterface(), ComputeFullJacobianThread::computeOnInternalFace(), ComputeResidualThread::determineObjectWarehouses(), ComputeJacobianThread::determineObjectWarehouses(), ComputeResidualAndJacobianThread::determineObjectWarehouses(), NonlinearThread::onBoundary(), ComputeUserObjectsThread::onBoundary(), ComputeElemDampingThread::onElement(), NonlinearThread::onElement(), ComputeUserObjectsThread::onElement(), NonlinearThread::onInterface(), ComputeUserObjectsThread::onInterface(), NonlinearThread::onInternalSide(), ComputeUserObjectsThread::onInternalSide(), ComputeUserObjectsThread::post(), ComputeJacobianThread::postElement(), ComputeJacobianBlocksThread::postElement(), ComputeJacobianBlocksThread::postInternalSide(), NonlinearThread::prepareFace(), ComputeUserObjectsThread::printBlockExecutionInformation(), NonlinearThread::printBlockExecutionInformation(), NonlinearThread::printBoundaryExecutionInformation(), ComputeElemDampingThread::printGeneralExecutionInformation(), ComputeUserObjectsThread::printGeneralExecutionInformation(), NonlinearThread::printGeneralExecutionInformation(), NonlinearThread::subdomainChanged(), and ComputeUserObjectsThread::subdomainChanged().

_mesh

MooseMesh& ThreadedElementLoopBase< ConstElemRange >::_mesh

protectedinherited

Definition at line 165 of file ThreadedElementLoopBase.h.

Referenced by CacheChangedListsThread::onElement(), NonlinearThread::printBlockExecutionInformation(), and NonlinearThread::printBoundaryExecutionInformation().

_need_materials

template<typename AuxKernelType>

bool ComputeElemAuxVarsThread< AuxKernelType >::_need_materials

protected

Definition at line 52 of file ComputeElemAuxVarsThread.h.

_neighbor_subdomain

SubdomainID ThreadedElementLoopBase< ConstElemRange >::_neighbor_subdomain

protectedinherited

The subdomain for the current neighbor.

Definition at line 175 of file ThreadedElementLoopBase.h.

Referenced by ComputeResidualThread::computeOnInternalFace(), ComputeFullJacobianThread::computeOnInternalFace(), and ComputeJacobianForScalingThread::operator()().

_old_neighbor_subdomain

SubdomainID ThreadedElementLoopBase< ConstElemRange >::_old_neighbor_subdomain

protectedinherited

The subdomain for the last neighbor.

Definition at line 178 of file ThreadedElementLoopBase.h.

_old_subdomain

SubdomainID ThreadedElementLoopBase< ConstElemRange >::_old_subdomain

protectedinherited

The subdomain for the last element.

Definition at line 172 of file ThreadedElementLoopBase.h.

Referenced by ComputeJacobianForScalingThread::operator()().

_subdomain

SubdomainID ThreadedElementLoopBase< ConstElemRange >::_subdomain

protectedinherited

The subdomain for the current element.

Definition at line 169 of file ThreadedElementLoopBase.h.

Referenced by ComputeFullJacobianThread::computeOnBoundary(), ComputeFullJacobianThread::computeOnElement(), NonlinearThread::computeOnElement(), ComputeResidualThread::computeOnInternalFace(), ComputeFullJacobianThread::computeOnInternalFace(), ComputeResidualAndJacobianThread::computeOnInternalFace(), ComputeJacobianThread::computeOnInternalFace(), NonlinearThread::computeOnInternalFace(), ComputeResidualThread::determineObjectWarehouses(), ComputeResidualAndJacobianThread::determineObjectWarehouses(), ComputeMaterialsObjectThread::onBoundary(), ComputeMarkerThread::onElement(), ComputeIndicatorThread::onElement(), ComputeMaterialsObjectThread::onElement(), ComputeUserObjectsThread::onElement(), ComputeMaterialsObjectThread::onInterface(), ComputeMaterialsObjectThread::onInternalSide(), ComputeJacobianForScalingThread::operator()(), ComputeJacobianBlocksThread::postInternalSide(), ComputeMarkerThread::printBlockExecutionInformation(), ComputeIndicatorThread::printBlockExecutionInformation(), ComputeUserObjectsThread::printBlockExecutionInformation(), NonlinearThread::printBlockExecutionInformation(), ComputeUserObjectsThread::querySubdomain(), ComputeMarkerThread::subdomainChanged(), ComputeIndicatorThread::subdomainChanged(), ComputeMaterialsObjectThread::subdomainChanged(), NonlinearThread::subdomainChanged(), and ComputeUserObjectsThread::subdomainChanged().

_tid

THREAD_ID ThreadedElementLoopBase< ConstElemRange >::_tid

protectedinherited

Definition at line 166 of file ThreadedElementLoopBase.h.

Referenced by ComputeResidualThread::accumulate(), ComputeResidualAndJacobianThread::accumulate(), ComputeResidualThread::accumulateLower(), ComputeResidualAndJacobianThread::accumulateLower(), ComputeJacobianThread::accumulateLower(), ComputeResidualThread::accumulateNeighbor(), ComputeResidualAndJacobianThread::accumulateNeighbor(), ComputeJacobianThread::accumulateNeighbor(), ComputeResidualThread::accumulateNeighborLower(), ComputeResidualAndJacobianThread::accumulateNeighborLower(), ComputeJacobianThread::accumulateNeighborLower(), ComputeFullJacobianThread::computeOnBoundary(), NonlinearThread::computeOnBoundary(), ComputeFullJacobianThread::computeOnElement(), NonlinearThread::computeOnElement(), ComputeFullJacobianThread::computeOnInterface(), NonlinearThread::computeOnInterface(), ComputeResidualThread::computeOnInternalFace(), ComputeFullJacobianThread::computeOnInternalFace(), ComputeResidualAndJacobianThread::computeOnInternalFace(), ComputeJacobianThread::computeOnInternalFace(), NonlinearThread::computeOnInternalFace(), ComputeResidualThread::determineObjectWarehouses(), ComputeJacobianThread::determineObjectWarehouses(), ComputeResidualAndJacobianThread::determineObjectWarehouses(), ComputeMaterialsObjectThread::onBoundary(), NonlinearThread::onBoundary(), ComputeUserObjectsThread::onBoundary(), ComputeMarkerThread::onElement(), ComputeElemDampingThread::onElement(), ComputeIndicatorThread::onElement(), ComputeMaterialsObjectThread::onElement(), NonlinearThread::onElement(), ComputeUserObjectsThread::onElement(), ComputeMaterialsObjectThread::onInterface(), NonlinearThread::onInterface(), ComputeUserObjectsThread::onInterface(), ComputeMaterialsObjectThread::onInternalSide(), ComputeIndicatorThread::onInternalSide(), NonlinearThread::onInternalSide(), ComputeUserObjectsThread::onInternalSide(), ComputeJacobianForScalingThread::operator()(), ComputeMaterialsObjectThread::post(), ComputeMarkerThread::post(), ComputeIndicatorThread::post(), ComputeUserObjectsThread::post(), ComputeJacobianThread::postElement(), ComputeJacobianBlocksThread::postElement(), ComputeJacobianBlocksThread::postInternalSide(), NonlinearThread::prepareFace(), ComputeMarkerThread::printBlockExecutionInformation(), ComputeIndicatorThread::printBlockExecutionInformation(), ComputeUserObjectsThread::printBlockExecutionInformation(), NonlinearThread::printBlockExecutionInformation(), NonlinearThread::printBoundaryExecutionInformation(), ComputeElemDampingThread::printGeneralExecutionInformation(), ComputeMarkerThread::printGeneralExecutionInformation(), ComputeIndicatorThread::printGeneralExecutionInformation(), ComputeUserObjectsThread::printGeneralExecutionInformation(), NonlinearThread::printGeneralExecutionInformation(), ComputeUserObjectsThread::queryBoundary(), ComputeUserObjectsThread::querySubdomain(), ComputeMarkerThread::subdomainChanged(), ComputeMaterialsObjectThread::subdomainChanged(), ComputeIndicatorThread::subdomainChanged(), NonlinearThread::subdomainChanged(), and ComputeUserObjectsThread::subdomainChanged().

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The documentation for this class was generated from the following files:

• include/loops/ComputeElemAuxVarsThread.h
• src/loops/ComputeElemAuxVarsThread.C