libMesh
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MeshIO class used for writing XDR (eXternal Data Representation) and XDA mesh files. More...
#include <xdr_io.h>
Public Types | |
typedef largest_id_type | xdr_id_type |
typedef uint32_t | old_header_id_type |
typedef uint64_t | new_header_id_type |
Public Member Functions | |
XdrIO (MeshBase &, const bool=false) | |
Constructor. More... | |
XdrIO (const MeshBase &, const bool=false) | |
Constructor. More... | |
virtual | ~XdrIO () |
Destructor. More... | |
virtual void | read (const std::string &) override |
This method implements reading a mesh from a specified file. More... | |
virtual void | write (const std::string &) override |
This method implements writing a mesh to a specified file. More... | |
bool | binary () const |
Get/Set the flag indicating if we should read/write binary. More... | |
bool & | binary () |
bool | legacy () const |
Get/Set the flag indicating if we should read/write legacy. More... | |
bool & | legacy () |
bool | write_parallel () const |
Report whether we should write parallel files. More... | |
void | set_write_parallel (bool do_parallel=true) |
Insist that we should/shouldn't write parallel files. More... | |
void | set_auto_parallel () |
Insist that we should write parallel files if and only if the mesh is an already distributed DistributedMesh. More... | |
const std::string & | version () const |
Get/Set the version string. More... | |
std::string & | version () |
const std::string & | boundary_condition_file_name () const |
Get/Set the boundary condition file name. More... | |
std::string & | boundary_condition_file_name () |
const std::string & | partition_map_file_name () const |
Get/Set the partitioning file name. More... | |
std::string & | partition_map_file_name () |
const std::string & | subdomain_map_file_name () const |
Get/Set the subdomain file name. More... | |
std::string & | subdomain_map_file_name () |
const std::string & | polynomial_level_file_name () const |
Get/Set the polynomial degree file name. More... | |
std::string & | polynomial_level_file_name () |
bool | version_at_least_0_9_2 () const |
bool | version_at_least_0_9_6 () const |
bool | version_at_least_1_1_0 () const |
bool | version_at_least_1_3_0 () const |
bool | version_at_least_1_8_0 () const |
bool | is_parallel_format () const |
Returns true iff this mesh file format and input class are parallelized, so that all processors can read their share of the data at once. More... | |
virtual void | write_equation_systems (const std::string &, const EquationSystems &, const std::set< std::string > *system_names=nullptr) |
This method implements writing a mesh with data to a specified file where the data is taken from the EquationSystems object. More... | |
virtual void | write_discontinuous_equation_systems (const std::string &, const EquationSystems &, const std::set< std::string > *system_names=nullptr) |
This method implements writing a mesh with discontinuous data to a specified file where the data is taken from the EquationSystems object. More... | |
virtual void | write_nodal_data (const std::string &, const std::vector< Number > &, const std::vector< std::string > &) |
This method implements writing a mesh with nodal data to a specified file where the nodal data and variable names are provided. More... | |
virtual void | write_nodal_data (const std::string &, const NumericVector< Number > &, const std::vector< std::string > &) |
This method may be overridden by "parallel" output formats for writing nodal data. More... | |
virtual void | write_nodal_data (const std::string &, const EquationSystems &, const std::set< std::string > *) |
This method should be overridden by "parallel" output formats for writing nodal data. More... | |
virtual void | write_nodal_data_discontinuous (const std::string &, const std::vector< Number > &, const std::vector< std::string > &) |
This method implements writing a mesh with discontinuous data to a specified file where the nodal data and variables names are provided. More... | |
unsigned int & | ascii_precision () |
Return/set the precision to use when writing ASCII files. More... | |
const Parallel::Communicator & | comm () const |
processor_id_type | n_processors () const |
processor_id_type | processor_id () const |
Protected Member Functions | |
MeshBase & | mesh () |
void | set_n_partitions (unsigned int n_parts) |
Sets the number of partitions in the mesh. More... | |
void | skip_comment_lines (std::istream &in, const char comment_start) |
Reads input from in , skipping all the lines that start with the character comment_start . More... | |
const MeshBase & | mesh () const |
virtual bool | get_add_sides () |
Protected Attributes | |
std::vector< bool > | elems_of_dimension |
A vector of bools describing what dimension elements have been encountered when reading a mesh. More... | |
const bool | _is_parallel_format |
Flag specifying whether this format is parallel-capable. More... | |
const bool | _serial_only_needed_on_proc_0 |
Flag specifying whether this format can be written by only serializing the mesh to processor zero. More... | |
const Parallel::Communicator & | _communicator |
Private Member Functions | |
void | write_serialized_subdomain_names (Xdr &io) const |
Write subdomain name information - NEW in 0.9.2 format. More... | |
void | write_serialized_connectivity (Xdr &io, const dof_id_type n_elem, const new_header_id_type n_elem_integers) const |
Write the connectivity for a parallel, distributed mesh. More... | |
void | write_serialized_nodes (Xdr &io, const dof_id_type n_nodes, const new_header_id_type n_node_integers) const |
Write the nodal locations for a parallel, distributed mesh. More... | |
void | write_serialized_bcs_helper (Xdr &io, const new_header_id_type n_side_bcs, const std::string bc_type) const |
Helper function used in write_serialized_side_bcs, write_serialized_edge_bcs, and write_serialized_shellface_bcs. More... | |
void | write_serialized_side_bcs (Xdr &io, const new_header_id_type n_side_bcs) const |
Write the side boundary conditions for a parallel, distributed mesh. More... | |
void | write_serialized_edge_bcs (Xdr &io, const new_header_id_type n_edge_bcs) const |
Write the edge boundary conditions for a parallel, distributed mesh. More... | |
void | write_serialized_shellface_bcs (Xdr &io, const new_header_id_type n_shellface_bcs) const |
Write the "shell face" boundary conditions for a parallel, distributed mesh. More... | |
void | write_serialized_nodesets (Xdr &io, const new_header_id_type n_nodesets) const |
Write the boundary conditions for a parallel, distributed mesh. More... | |
void | write_serialized_bc_names (Xdr &io, const BoundaryInfo &info, bool is_sideset) const |
Write boundary names information (sideset and nodeset) - NEW in 0.9.2 format. More... | |
template<typename T > | |
void | read_header (Xdr &io, std::vector< T > &meta_data) |
Read header information - templated to handle old (4-byte) or new (8-byte) header id types. More... | |
void | read_serialized_subdomain_names (Xdr &io) |
Read subdomain name information - NEW in 0.9.2 format. More... | |
template<typename T > | |
void | read_serialized_connectivity (Xdr &io, const dof_id_type n_elem, const std::vector< new_header_id_type > &meta_data, T type_size) |
Read the connectivity for a parallel, distributed mesh. More... | |
void | read_serialized_nodes (Xdr &io, const dof_id_type n_nodes, const std::vector< new_header_id_type > &meta_data) |
Read the nodal locations for a parallel, distributed mesh. More... | |
template<typename T > | |
void | read_serialized_bcs_helper (Xdr &io, T type_size, const std::string bc_type) |
Helper function used in read_serialized_side_bcs, read_serialized_edge_bcs, and read_serialized_shellface_bcs. More... | |
template<typename T > | |
void | read_serialized_side_bcs (Xdr &io, T type_size) |
Read the side boundary conditions for a parallel, distributed mesh. More... | |
template<typename T > | |
void | read_serialized_edge_bcs (Xdr &io, T type_size) |
Read the edge boundary conditions for a parallel, distributed mesh. More... | |
template<typename T > | |
void | read_serialized_shellface_bcs (Xdr &io, T type_size) |
Read the "shell face" boundary conditions for a parallel, distributed mesh. More... | |
template<typename T > | |
void | read_serialized_nodesets (Xdr &io, T type_size) |
Read the nodeset conditions for a parallel, distributed mesh. More... | |
void | read_serialized_bc_names (Xdr &io, BoundaryInfo &info, bool is_sideset) |
Read boundary names information (sideset and nodeset) - NEW in 0.9.2 format. More... | |
void | pack_element (std::vector< xdr_id_type > &conn, const Elem *elem, const dof_id_type parent_id, const dof_id_type parent_pid, const new_header_id_type n_elem_integers) const |
Pack an element into a transfer buffer for parallel communication. More... | |
Private Attributes | |
bool | _binary |
bool | _legacy |
bool | _write_serial |
bool | _write_parallel |
bool | _write_unique_id |
unsigned int | _field_width |
std::string | _version |
std::string | _bc_file_name |
std::string | _partition_map_file |
std::string | _subdomain_map_file |
std::string | _p_level_file |
Static Private Attributes | |
static const std::size_t | io_blksize = 128000 |
Define the block size to use for chunked IO. More... | |
MeshIO class used for writing XDR (eXternal Data Representation) and XDA mesh files.
XDR/XDA is libmesh's internal data format, and allows the full refinement tree structure of the mesh to be written to file.
typedef uint64_t libMesh::XdrIO::new_header_id_type |
typedef uint32_t libMesh::XdrIO::old_header_id_type |
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explicit |
Constructor.
Takes a writable reference to a mesh object. This is the constructor required to read a mesh. The optional parameter binary
can be used to switch between ASCII (false
, the default) or binary (true
) files.
Definition at line 74 of file xdr_io.C.
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explicit |
Constructor.
Takes a reference to a constant mesh object. This constructor will only allow us to write the mesh. The optional parameter binary
can be used to switch between ASCII (false
, the default) or binary (true
) files.
Definition at line 98 of file xdr_io.C.
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virtualdefault |
Destructor.
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inlineinherited |
Return/set the precision to use when writing ASCII files.
By default we use numeric_limits<Real>::max_digits10, which should be enough to write out to ASCII and get the exact same Real back when reading in.
Definition at line 269 of file mesh_output.h.
Referenced by libMesh::UNVIO::nodes_out(), libMesh::FroIO::write(), libMesh::MEDITIO::write_ascii(), libMesh::TecplotIO::write_ascii(), libMesh::GMVIO::write_ascii_new_impl(), and libMesh::GMVIO::write_ascii_old_impl().
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inline |
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inline |
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inline |
Get/Set the boundary condition file name.
Definition at line 146 of file xdr_io.h.
References _bc_file_name.
Referenced by read_header(), read_serialized_bcs_helper(), read_serialized_nodesets(), and write().
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inline |
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inlineinherited |
Parallel::Communicator
object used by this mesh. Definition at line 97 of file parallel_object.h.
References libMesh::ParallelObject::_communicator.
Referenced by libMesh::__libmesh_petsc_diff_solver_jacobian(), libMesh::__libmesh_petsc_diff_solver_monitor(), libMesh::__libmesh_petsc_diff_solver_residual(), libMesh::__libmesh_tao_equality_constraints(), libMesh::__libmesh_tao_equality_constraints_jacobian(), libMesh::__libmesh_tao_gradient(), libMesh::__libmesh_tao_hessian(), libMesh::__libmesh_tao_inequality_constraints(), libMesh::__libmesh_tao_inequality_constraints_jacobian(), libMesh::__libmesh_tao_objective(), libMesh::MeshRefinement::_coarsen_elements(), libMesh::ExactSolution::_compute_error(), libMesh::UniformRefinementEstimator::_estimate_error(), libMesh::Partitioner::_find_global_index_by_pid_map(), libMesh::BoundaryInfo::_find_id_maps(), libMesh::SlepcEigenSolver< libMesh::Number >::_petsc_shell_matrix_get_diagonal(), libMesh::PetscLinearSolver< Number >::_petsc_shell_matrix_get_diagonal(), libMesh::SlepcEigenSolver< libMesh::Number >::_petsc_shell_matrix_mult(), libMesh::PetscLinearSolver< Number >::_petsc_shell_matrix_mult(), libMesh::PetscLinearSolver< Number >::_petsc_shell_matrix_mult_add(), libMesh::MeshRefinement::_refine_elements(), libMesh::MeshRefinement::_smooth_flags(), libMesh::DofMap::add_constraints_to_send_list(), add_cube_convex_hull_to_mesh(), libMesh::PetscDMWrapper::add_dofs_helper(), libMesh::PetscDMWrapper::add_dofs_to_section(), libMesh::TransientRBConstruction::add_IC_to_RB_space(), libMesh::EigenSystem::add_matrices(), libMesh::System::add_matrix(), libMesh::RBConstruction::add_scaled_matrix_and_vector(), libMesh::System::add_variable(), libMesh::System::add_variables(), libMesh::System::add_vector(), libMesh::MeshTools::Modification::all_tri(), libMesh::LaplaceMeshSmoother::allgather_graph(), libMesh::DofMap::allgather_recursive_constraints(), libMesh::TransientRBConstruction::allocate_data_structures(), libMesh::RBConstruction::allocate_data_structures(), libMesh::TransientRBConstruction::assemble_affine_expansion(), libMesh::FEMSystem::assemble_qoi(), libMesh::Nemesis_IO::assert_symmetric_cmaps(), libMesh::MeshCommunication::assign_global_indices(), libMesh::Partitioner::assign_partitioning(), libMesh::MeshTools::Generation::build_extrusion(), libMesh::BoundaryInfo::build_node_list_from_side_list(), libMesh::EquationSystems::build_parallel_elemental_solution_vector(), libMesh::EquationSystems::build_parallel_solution_vector(), libMesh::PetscDMWrapper::build_section(), libMesh::PetscDMWrapper::build_sf(), libMesh::MeshBase::cache_elem_data(), libMesh::System::calculate_norm(), libMesh::DofMap::check_dirichlet_bcid_consistency(), libMesh::RBConstruction::compute_Fq_representor_innerprods(), libMesh::RBConstruction::compute_max_error_bound(), libMesh::Nemesis_IO_Helper::compute_num_global_elem_blocks(), libMesh::Nemesis_IO_Helper::compute_num_global_nodesets(), libMesh::Nemesis_IO_Helper::compute_num_global_sidesets(), libMesh::RBConstruction::compute_output_dual_innerprods(), libMesh::RBConstruction::compute_residual_dual_norm_slow(), libMesh::RBSCMConstruction::compute_SCM_bounds_on_training_set(), libMesh::DofMap::computed_sparsity_already(), libMesh::Problem_Interface::computeF(), libMesh::Problem_Interface::computeJacobian(), libMesh::Problem_Interface::computePreconditioner(), libMesh::ContinuationSystem::ContinuationSystem(), libMesh::MeshBase::copy_constraint_rows(), libMesh::ExodusII_IO::copy_elemental_solution(), libMesh::ExodusII_IO::copy_nodal_solution(), libMesh::ExodusII_IO::copy_scalar_solution(), libMesh::MeshTools::correct_node_proc_ids(), libMesh::MeshTools::create_bounding_box(), libMesh::DofMap::create_dof_constraints(), libMesh::MeshTools::create_nodal_bounding_box(), libMesh::MeshRefinement::create_parent_error_vector(), libMesh::MeshTools::create_processor_bounding_box(), libMesh::MeshTools::create_subdomain_bounding_box(), libMesh::PetscMatrix< libMesh::Number >::create_submatrix_nosort(), libMesh::MeshCommunication::delete_remote_elements(), libMesh::RBEIMEvaluation::distribute_bfs(), libMesh::DofMap::distribute_dofs(), DMlibMeshFunction(), DMlibMeshJacobian(), DMlibMeshSetSystem_libMesh(), DMVariableBounds_libMesh(), libMesh::DTKSolutionTransfer::DTKSolutionTransfer(), libMesh::MeshRefinement::eliminate_unrefined_patches(), libMesh::RBEIMConstruction::enrich_eim_approximation_on_interiors(), libMesh::RBEIMConstruction::enrich_eim_approximation_on_nodes(), libMesh::RBEIMConstruction::enrich_eim_approximation_on_sides(), libMesh::TransientRBConstruction::enrich_RB_space(), libMesh::EpetraVector< T >::EpetraVector(), AssembleOptimization::equality_constraints(), libMesh::PatchRecoveryErrorEstimator::estimate_error(), libMesh::WeightedPatchRecoveryErrorEstimator::estimate_error(), libMesh::AdjointRefinementEstimator::estimate_error(), libMesh::ExactErrorEstimator::estimate_error(), libMesh::MeshRefinement::flag_elements_by_elem_fraction(), libMesh::MeshRefinement::flag_elements_by_error_fraction(), libMesh::MeshRefinement::flag_elements_by_error_tolerance(), libMesh::MeshRefinement::flag_elements_by_mean_stddev(), libMesh::MeshRefinement::flag_elements_by_nelem_target(), libMesh::RBEIMEvaluation::gather_bfs(), libMesh::DofMap::gather_constraints(), libMesh::MeshfreeInterpolation::gather_remote_data(), libMesh::CondensedEigenSystem::get_eigenpair(), libMesh::RBEIMEvaluation::get_eim_basis_function_node_value(), libMesh::RBEIMEvaluation::get_eim_basis_function_side_value(), libMesh::RBEIMEvaluation::get_eim_basis_function_value(), libMesh::MeshBase::get_info(), libMesh::System::get_info(), libMesh::DofMap::get_info(), libMesh::ImplicitSystem::get_linear_solver(), libMesh::RBEIMConstruction::get_max_abs_value(), libMesh::RBEIMConstruction::get_node_max_abs_value(), libMesh::RBEIMEvaluation::get_parametrized_function_node_value(), libMesh::RBEIMEvaluation::get_parametrized_function_side_value(), libMesh::RBEIMEvaluation::get_parametrized_function_value(), libMesh::RBEIMConstruction::get_random_point(), AssembleOptimization::inequality_constraints(), AssembleOptimization::inequality_constraints_jacobian(), libMesh::LocationMap< T >::init(), libMesh::TimeSolver::init(), libMesh::SystemSubsetBySubdomain::init(), libMesh::PetscDMWrapper::init_and_attach_petscdm(), libMesh::ExodusII_IO_Helper::initialize(), libMesh::OptimizationSystem::initialize_equality_constraints_storage(), libMesh::OptimizationSystem::initialize_inequality_constraints_storage(), libMesh::RBEIMConstruction::initialize_parametrized_functions_in_training_set(), libMesh::RBEIMConstruction::inner_product(), integrate_function(), libMesh::MeshTools::libmesh_assert_consistent_distributed(), libMesh::MeshTools::libmesh_assert_consistent_distributed_nodes(), libMesh::MeshTools::libmesh_assert_contiguous_dof_ids(), libMesh::MeshTools::libmesh_assert_equal_connectivity(), libMesh::MeshTools::libmesh_assert_equal_points(), libMesh::MeshTools::libmesh_assert_parallel_consistent_new_node_procids(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Elem >(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Node >(), libMesh::MeshTools::libmesh_assert_topology_consistent_procids< Node >(), libMesh::MeshTools::libmesh_assert_valid_boundary_ids(), libMesh::MeshTools::libmesh_assert_valid_dof_ids(), libMesh::MeshTools::libmesh_assert_valid_neighbors(), libMesh::DistributedMesh::libmesh_assert_valid_parallel_flags(), libMesh::DistributedMesh::libmesh_assert_valid_parallel_object_ids(), libMesh::DistributedMesh::libmesh_assert_valid_parallel_p_levels(), libMesh::MeshTools::libmesh_assert_valid_refinement_flags(), libMesh::MeshTools::libmesh_assert_valid_unique_ids(), libMesh::libmesh_petsc_linesearch_shellfunc(), libMesh::libmesh_petsc_preconditioner_apply(), libMesh::libmesh_petsc_recalculate_monitor(), libMesh::libmesh_petsc_snes_fd_residual(), libMesh::libmesh_petsc_snes_jacobian(), libMesh::libmesh_petsc_snes_mffd_interface(), libMesh::libmesh_petsc_snes_mffd_residual(), libMesh::libmesh_petsc_snes_postcheck(), libMesh::libmesh_petsc_snes_precheck(), libMesh::libmesh_petsc_snes_residual(), libMesh::libmesh_petsc_snes_residual_helper(), libMesh::MeshRefinement::limit_level_mismatch_at_edge(), libMesh::MeshRefinement::limit_level_mismatch_at_node(), libMesh::MeshRefinement::limit_overrefined_boundary(), libMesh::MeshRefinement::limit_underrefined_boundary(), libMesh::LinearImplicitSystem::LinearImplicitSystem(), main(), libMesh::MeshRefinement::make_coarsening_compatible(), libMesh::MeshCommunication::make_elems_parallel_consistent(), libMesh::MeshRefinement::make_flags_parallel_consistent(), libMesh::MeshCommunication::make_new_node_proc_ids_parallel_consistent(), libMesh::MeshCommunication::make_new_nodes_parallel_consistent(), libMesh::MeshCommunication::make_node_bcids_parallel_consistent(), libMesh::MeshCommunication::make_node_ids_parallel_consistent(), libMesh::MeshCommunication::make_node_proc_ids_parallel_consistent(), libMesh::MeshCommunication::make_node_unique_ids_parallel_consistent(), libMesh::MeshCommunication::make_nodes_parallel_consistent(), libMesh::MeshCommunication::make_p_levels_parallel_consistent(), libMesh::MeshRefinement::make_refinement_compatible(), libMesh::TransientRBConstruction::mass_matrix_scaled_matvec(), libMesh::FEMSystem::mesh_position_set(), libMesh::TriangulatorInterface::MeshedHole::MeshedHole(), LinearElasticityWithContact::move_mesh(), libMesh::DistributedMesh::n_active_elem(), libMesh::MeshTools::n_active_levels(), libMesh::BoundaryInfo::n_boundary_conds(), libMesh::DofMap::n_constrained_dofs(), libMesh::BoundaryInfo::n_edge_conds(), libMesh::CondensedEigenSystem::n_global_non_condensed_dofs(), libMesh::MeshTools::n_levels(), MixedOrderTest::n_neighbor_links(), libMesh::BoundaryInfo::n_nodeset_conds(), libMesh::SparsityPattern::Build::n_nonzeros(), libMesh::MeshTools::n_p_levels(), libMesh::BoundaryInfo::n_shellface_conds(), libMesh::RBEIMEvaluation::node_distribute_bfs(), libMesh::RBEIMEvaluation::node_gather_bfs(), libMesh::RBEIMConstruction::node_inner_product(), libMesh::MeshBase::operator==(), libMesh::DistributedMesh::parallel_max_elem_id(), libMesh::DistributedMesh::parallel_max_node_id(), libMesh::ReplicatedMesh::parallel_max_unique_id(), libMesh::DistributedMesh::parallel_max_unique_id(), libMesh::DistributedMesh::parallel_n_elem(), libMesh::DistributedMesh::parallel_n_nodes(), libMesh::SparsityPattern::Build::parallel_sync(), libMesh::BoundaryInfo::parallel_sync_node_ids(), libMesh::BoundaryInfo::parallel_sync_side_ids(), libMesh::MeshTools::paranoid_n_levels(), libMesh::Partitioner::partition(), libMesh::Partitioner::partition_unpartitioned_elements(), libMesh::petsc_auto_fieldsplit(), libMesh::System::point_gradient(), libMesh::System::point_hessian(), libMesh::System::point_value(), libMesh::MeshBase::prepare_for_use(), libMesh::DofMap::print_dof_constraints(), libMesh::DofMap::process_mesh_constraint_rows(), libMesh::Partitioner::processor_pairs_to_interface_nodes(), libMesh::InterMeshProjection::project_system_vectors(), FEMParameters::read(), libMesh::Nemesis_IO::read(), read(), libMesh::EquationSystems::read(), libMesh::ExodusII_IO::read_header(), libMesh::CheckpointIO::read_header(), read_header(), libMesh::System::read_header(), libMesh::RBEIMEvaluation::read_in_interior_basis_functions(), libMesh::RBEIMEvaluation::read_in_node_basis_functions(), libMesh::RBEIMEvaluation::read_in_side_basis_functions(), libMesh::RBEvaluation::read_in_vectors_from_multiple_files(), libMesh::System::read_legacy_data(), libMesh::TransientRBConstruction::read_riesz_representors_from_files(), libMesh::RBConstruction::read_riesz_representors_from_files(), libMesh::System::read_SCALAR_dofs(), read_serialized_bc_names(), read_serialized_bcs_helper(), libMesh::System::read_serialized_blocked_dof_objects(), read_serialized_connectivity(), read_serialized_nodes(), read_serialized_nodesets(), read_serialized_subdomain_names(), libMesh::System::read_serialized_vector(), libMesh::Nemesis_IO_Helper::read_var_names_impl(), libMesh::MeshBase::recalculate_n_partitions(), libMesh::MeshRefinement::refine_and_coarsen_elements(), libMesh::DistributedMesh::renumber_dof_objects(), libMesh::DistributedMesh::renumber_nodes_and_elements(), LinearElasticityWithContact::residual_and_jacobian(), OverlappingAlgebraicGhostingTest::run_ghosting_test(), OverlappingCouplingGhostingTest::run_sparsity_pattern_test(), scale_mesh_and_plot(), libMesh::DofMap::scatter_constraints(), libMesh::CheckpointIO::select_split_config(), libMesh::GenericProjector< FFunctor, GFunctor, FValue, ProjectionAction >::send_and_insert_dof_values(), libMesh::TransientRBConstruction::set_error_temporal_data(), libMesh::Partitioner::set_interface_node_processor_ids_BFS(), libMesh::Partitioner::set_interface_node_processor_ids_linear(), libMesh::Partitioner::set_interface_node_processor_ids_petscpartitioner(), libMesh::Partitioner::set_node_processor_ids(), libMesh::DofMap::set_nonlocal_dof_objects(), libMesh::Partitioner::set_parent_processor_ids(), libMesh::PetscDMWrapper::set_point_range_in_section(), libMesh::PetscDiffSolver::setup_petsc_data(), libMesh::RBEIMEvaluation::side_distribute_bfs(), libMesh::RBEIMEvaluation::side_gather_bfs(), libMesh::RBEIMConstruction::side_inner_product(), libMesh::Partitioner::single_partition(), libMesh::LaplaceMeshSmoother::smooth(), libMesh::split_mesh(), libMesh::RBEIMConstruction::store_eim_solutions_for_training_set(), libMesh::MeshBase::subdomain_ids(), libMesh::BoundaryInfo::sync(), ConstraintOperatorTest::test1DCoarseningNewNodes(), ConstraintOperatorTest::test1DCoarseningOperator(), libMesh::MeshRefinement::test_level_one(), MeshfunctionDFEM::test_mesh_function_dfem(), MeshfunctionDFEM::test_mesh_function_dfem_grad(), MeshFunctionTest::test_p_level(), libMesh::MeshRefinement::test_unflagged(), DofMapTest::testBadElemFECombo(), SystemsTest::testBlockRestrictedVarNDofs(), BoundaryInfoTest::testBoundaryOnChildrenErrors(), MeshInputTest::testExodusIGASidesets(), MeshTriangulationTest::testFoundCenters(), PointLocatorTest::testLocator(), BoundaryInfoTest::testMesh(), PointLocatorTest::testPlanar(), MeshTriangulationTest::testPoly2TriRefinementBase(), SystemsTest::testProjectCubeWithMeshFunction(), BoundaryInfoTest::testRenumber(), CheckpointIOTest::testSplitter(), MeshInputTest::testTetgenIO(), MeshTriangulationTest::testTriangulatorInterp(), MeshTriangulationTest::testTriangulatorMeshedHoles(), libMesh::MeshTools::total_weight(), libMesh::RBConstruction::train_reduced_basis_with_POD(), libMesh::MeshFunctionSolutionTransfer::transfer(), libMesh::MeshfreeSolutionTransfer::transfer(), libMesh::Poly2TriTriangulator::triangulate(), libMesh::TransientRBConstruction::truth_assembly(), libMesh::RBConstruction::truth_assembly(), libMesh::MeshRefinement::uniformly_coarsen(), libMesh::TransientRBConstruction::update_RB_initial_condition_all_N(), libMesh::TransientRBConstruction::update_RB_system_matrices(), libMesh::RBConstruction::update_RB_system_matrices(), libMesh::TransientRBConstruction::update_residual_terms(), libMesh::RBConstruction::update_residual_terms(), libMesh::NameBasedIO::write(), write(), libMesh::VTKIO::write_nodal_data(), libMesh::RBEIMEvaluation::write_out_interior_basis_functions(), libMesh::RBEIMEvaluation::write_out_node_basis_functions(), libMesh::RBEIMEvaluation::write_out_side_basis_functions(), libMesh::RBEvaluation::write_out_vectors(), libMesh::TransientRBConstruction::write_riesz_representors_to_files(), libMesh::RBConstruction::write_riesz_representors_to_files(), libMesh::System::write_SCALAR_dofs(), write_serialized_bcs_helper(), libMesh::System::write_serialized_blocked_dof_objects(), write_serialized_connectivity(), write_serialized_nodes(), write_serialized_nodesets(), libMesh::RBDataSerialization::RBEvaluationSerialization::write_to_file(), libMesh::RBDataSerialization::TransientRBEvaluationSerialization::write_to_file(), libMesh::RBDataSerialization::RBEIMEvaluationSerialization::write_to_file(), and libMesh::RBDataSerialization::RBSCMEvaluationSerialization::write_to_file().
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Reimplemented in libMesh::ExodusII_IO.
Definition at line 176 of file mesh_output.h.
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Returns true iff this mesh file format and input class are parallelized, so that all processors can read their share of the data at once.
Definition at line 87 of file mesh_input.h.
References libMesh::MeshInput< MT >::_is_parallel_format.
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Definition at line 178 of file mesh_input.h.
Referenced by libMesh::GMVIO::_read_one_cell(), libMesh::VTKIO::cells_to_vtk(), libMesh::ExodusII_IO::copy_elemental_solution(), libMesh::Nemesis_IO::copy_elemental_solution(), libMesh::ExodusII_IO::copy_nodal_solution(), libMesh::TetGenIO::element_in(), libMesh::UNVIO::elements_in(), libMesh::UNVIO::elements_out(), libMesh::VTKIO::get_local_node_values(), libMesh::ExodusII_IO::get_sideset_data_indices(), libMesh::UNVIO::groups_in(), libMesh::TetGenIO::node_in(), libMesh::UNVIO::nodes_in(), libMesh::UNVIO::nodes_out(), libMesh::VTKIO::nodes_to_vtk(), libMesh::Nemesis_IO::prepare_to_write_nodal_data(), libMesh::GMVIO::read(), libMesh::Nemesis_IO::read(), libMesh::ExodusII_IO::read(), read(), libMesh::CheckpointIO::read(), libMesh::VTKIO::read(), libMesh::CheckpointIO::read_bcs(), libMesh::CheckpointIO::read_connectivity(), libMesh::ExodusII_IO::read_header(), libMesh::CheckpointIO::read_header(), read_header(), libMesh::UCDIO::read_implementation(), libMesh::UNVIO::read_implementation(), libMesh::GmshIO::read_mesh(), libMesh::DynaIO::read_mesh(), libMesh::CheckpointIO::read_nodes(), libMesh::CheckpointIO::read_nodesets(), libMesh::CheckpointIO::read_remote_elem(), read_serialized_bcs_helper(), read_serialized_connectivity(), read_serialized_nodes(), read_serialized_nodesets(), read_serialized_subdomain_names(), libMesh::ExodusII_IO::read_sideset_data(), libMesh::OFFIO::read_stream(), libMesh::MatlabIO::read_stream(), libMesh::CheckpointIO::read_subdomain_names(), libMesh::TetGenIO::write(), libMesh::Nemesis_IO::write(), write(), libMesh::CheckpointIO::write(), libMesh::ExodusII_IO::write(), libMesh::GMVIO::write_ascii_new_impl(), libMesh::GMVIO::write_ascii_old_impl(), libMesh::GMVIO::write_binary(), libMesh::GMVIO::write_discontinuous_gmv(), libMesh::Nemesis_IO::write_element_data(), libMesh::ExodusII_IO::write_element_data(), libMesh::ExodusII_IO::write_elemsets(), libMesh::UCDIO::write_header(), libMesh::UCDIO::write_implementation(), libMesh::UCDIO::write_interior_elems(), libMesh::GmshIO::write_mesh(), libMesh::UCDIO::write_nodal_data(), libMesh::VTKIO::write_nodal_data(), libMesh::ExodusII_IO::write_nodal_data(), libMesh::ExodusII_IO::write_nodal_data_common(), libMesh::ExodusII_IO::write_nodal_data_discontinuous(), libMesh::UCDIO::write_nodes(), libMesh::CheckpointIO::write_nodesets(), write_parallel(), libMesh::GmshIO::write_post(), write_serialized_bcs_helper(), write_serialized_connectivity(), write_serialized_nodes(), write_serialized_nodesets(), write_serialized_subdomain_names(), libMesh::ExodusII_IO::write_sideset_data(), libMesh::UCDIO::write_soln(), and libMesh::CheckpointIO::write_subdomain_names().
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Definition at line 259 of file mesh_output.h.
References libMesh::libmesh_assert().
Referenced by libMesh::FroIO::write(), libMesh::TecplotIO::write(), libMesh::MEDITIO::write(), libMesh::PostscriptIO::write(), libMesh::EnsightIO::write(), libMesh::TecplotIO::write_ascii(), libMesh::TecplotIO::write_binary(), libMesh::TecplotIO::write_nodal_data(), libMesh::MEDITIO::write_nodal_data(), and libMesh::GnuPlotIO::write_solution().
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Definition at line 103 of file parallel_object.h.
References libMesh::ParallelObject::_communicator, libMesh::libmesh_assert(), and TIMPI::Communicator::size().
Referenced by libMesh::Partitioner::_find_global_index_by_pid_map(), libMesh::BoundaryInfo::_find_id_maps(), libMesh::DofMap::add_constraints_to_send_list(), libMesh::PetscDMWrapper::add_dofs_to_section(), libMesh::DistributedMesh::add_elem(), libMesh::DofMap::add_neighbors_to_send_list(), libMesh::DistributedMesh::add_node(), libMesh::System::add_vector(), libMesh::LaplaceMeshSmoother::allgather_graph(), libMesh::DofMap::allgather_recursive_constraints(), libMesh::FEMSystem::assembly(), libMesh::Nemesis_IO::assert_symmetric_cmaps(), libMesh::Partitioner::assign_partitioning(), libMesh::AztecLinearSolver< T >::AztecLinearSolver(), libMesh::EquationSystems::build_parallel_elemental_solution_vector(), libMesh::DistributedMesh::clear(), libMesh::DistributedMesh::clear_elems(), libMesh::Nemesis_IO_Helper::compute_border_node_ids(), libMesh::Nemesis_IO_Helper::construct_nemesis_filename(), libMesh::ExodusII_IO::copy_scalar_solution(), libMesh::Nemesis_IO::copy_scalar_solution(), libMesh::UnstructuredMesh::create_pid_mesh(), libMesh::MeshTools::create_processor_bounding_box(), libMesh::DofMap::distribute_dofs(), libMesh::DofMap::distribute_scalar_dofs(), libMesh::DistributedMesh::DistributedMesh(), libMesh::EnsightIO::EnsightIO(), libMesh::RBEIMEvaluation::gather_bfs(), libMesh::MeshBase::get_info(), libMesh::SystemSubsetBySubdomain::init(), libMesh::PetscDMWrapper::init_and_attach_petscdm(), libMesh::Nemesis_IO_Helper::initialize(), libMesh::ExodusII_IO_Helper::initialize(), libMesh::DistributedMesh::insert_elem(), libMesh::MeshTools::libmesh_assert_contiguous_dof_ids(), libMesh::MeshTools::libmesh_assert_parallel_consistent_new_node_procids(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Elem >(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Node >(), libMesh::MeshTools::libmesh_assert_topology_consistent_procids< Node >(), libMesh::MeshTools::libmesh_assert_valid_boundary_ids(), libMesh::MeshTools::libmesh_assert_valid_dof_ids(), libMesh::MeshTools::libmesh_assert_valid_neighbors(), libMesh::MeshTools::libmesh_assert_valid_refinement_flags(), libMesh::DofMap::local_variable_indices(), libMesh::MeshRefinement::make_coarsening_compatible(), libMesh::MeshBase::n_active_elem_on_proc(), libMesh::MeshBase::n_elem_on_proc(), libMesh::MeshBase::n_nodes_on_proc(), libMesh::RBEIMEvaluation::node_gather_bfs(), libMesh::Partitioner::partition(), libMesh::MeshBase::partition(), libMesh::Partitioner::partition_unpartitioned_elements(), libMesh::System::point_gradient(), libMesh::System::point_hessian(), libMesh::System::point_value(), libMesh::DofMap::prepare_send_list(), libMesh::DofMap::print_dof_constraints(), libMesh::NameBasedIO::read(), libMesh::Nemesis_IO::read(), libMesh::CheckpointIO::read(), libMesh::CheckpointIO::read_connectivity(), read_header(), libMesh::CheckpointIO::read_nodes(), libMesh::System::read_parallel_data(), libMesh::System::read_SCALAR_dofs(), libMesh::System::read_serialized_blocked_dof_objects(), libMesh::System::read_serialized_vector(), libMesh::DistributedMesh::renumber_dof_objects(), libMesh::Partitioner::repartition(), OverlappingFunctorTest::run_partitioner_test(), libMesh::DofMap::scatter_constraints(), libMesh::DistributedMesh::set_next_unique_id(), libMesh::DofMap::set_nonlocal_dof_objects(), libMesh::PetscDMWrapper::set_point_range_in_section(), WriteVecAndScalar::setupTests(), libMesh::RBEIMEvaluation::side_gather_bfs(), DistributedMeshTest::testRemoteElemError(), CheckpointIOTest::testSplitter(), libMesh::MeshRefinement::uniformly_coarsen(), libMesh::DistributedMesh::update_parallel_id_counts(), libMesh::GMVIO::write_binary(), libMesh::GMVIO::write_discontinuous_gmv(), libMesh::ExodusII_IO_Helper::write_nodal_coordinates(), libMesh::VTKIO::write_nodal_data(), libMesh::ExodusII_IO::write_nodal_data(), libMesh::System::write_parallel_data(), libMesh::System::write_SCALAR_dofs(), write_serialized_bcs_helper(), libMesh::System::write_serialized_blocked_dof_objects(), write_serialized_connectivity(), write_serialized_nodes(), and write_serialized_nodesets().
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Pack an element into a transfer buffer for parallel communication.
Definition at line 2430 of file xdr_io.C.
References libMesh::DofObject::get_extra_integer(), libMesh::DofObject::invalid_id, libMesh::libmesh_assert(), libMesh::Elem::n_nodes(), libMesh::Elem::node_id(), libMesh::Elem::node_index_range(), libMesh::Elem::p_level(), libMesh::DofObject::processor_id(), libMesh::Elem::subdomain_id(), libMesh::Elem::type(), libMesh::Elem::type_to_n_nodes_map, and libMesh::DofObject::unique_id().
Referenced by write_serialized_connectivity().
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Get/Set the partitioning file name.
Definition at line 152 of file xdr_io.h.
References _partition_map_file.
Referenced by read_header(), read_serialized_connectivity(), write(), and write_serialized_connectivity().
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Get/Set the polynomial degree file name.
Definition at line 164 of file xdr_io.h.
References _p_level_file.
Referenced by read_header(), read_serialized_connectivity(), write(), and write_serialized_connectivity().
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Definition at line 114 of file parallel_object.h.
References libMesh::ParallelObject::_communicator, and TIMPI::Communicator::rank().
Referenced by libMesh::BoundaryInfo::_find_id_maps(), libMesh::PetscDMWrapper::add_dofs_to_section(), libMesh::DistributedMesh::add_elem(), libMesh::BoundaryInfo::add_elements(), libMesh::DofMap::add_neighbors_to_send_list(), libMesh::DistributedMesh::add_node(), libMesh::MeshTools::Modification::all_tri(), libMesh::DofMap::allgather_recursive_constraints(), libMesh::FEMSystem::assembly(), libMesh::Nemesis_IO::assert_symmetric_cmaps(), libMesh::Partitioner::assign_partitioning(), libMesh::Nemesis_IO_Helper::build_element_and_node_maps(), libMesh::Partitioner::build_graph(), libMesh::InfElemBuilder::build_inf_elem(), libMesh::BoundaryInfo::build_node_list_from_side_list(), libMesh::EquationSystems::build_parallel_elemental_solution_vector(), libMesh::EquationSystems::build_parallel_solution_vector(), libMesh::DistributedMesh::clear(), libMesh::DistributedMesh::clear_elems(), libMesh::ExodusII_IO_Helper::close(), libMesh::Nemesis_IO_Helper::compute_border_node_ids(), libMesh::Nemesis_IO_Helper::compute_communication_map_parameters(), libMesh::Nemesis_IO_Helper::compute_internal_and_border_elems_and_internal_nodes(), libMesh::RBConstruction::compute_max_error_bound(), libMesh::Nemesis_IO_Helper::compute_node_communication_maps(), libMesh::Nemesis_IO_Helper::compute_num_global_elem_blocks(), libMesh::Nemesis_IO_Helper::compute_num_global_nodesets(), libMesh::Nemesis_IO_Helper::compute_num_global_sidesets(), libMesh::Nemesis_IO_Helper::construct_nemesis_filename(), libMesh::ExodusII_IO::copy_elemental_solution(), libMesh::ExodusII_IO::copy_nodal_solution(), libMesh::ExodusII_IO::copy_scalar_solution(), libMesh::Nemesis_IO::copy_scalar_solution(), libMesh::MeshTools::correct_node_proc_ids(), libMesh::ExodusII_IO_Helper::create(), libMesh::DistributedMesh::delete_elem(), libMesh::MeshCommunication::delete_remote_elements(), libMesh::DofMap::distribute_dofs(), libMesh::DofMap::distribute_local_dofs_node_major(), libMesh::DofMap::distribute_local_dofs_var_major(), libMesh::DofMap::distribute_scalar_dofs(), libMesh::DistributedMesh::DistributedMesh(), libMesh::DofMap::end_dof(), libMesh::DofMap::end_old_dof(), libMesh::EnsightIO::EnsightIO(), libMesh::GenericProjector< FFunctor, GFunctor, FValue, ProjectionAction >::SubFunctor::find_dofs_to_send(), libMesh::MeshFunction::find_element(), libMesh::MeshFunction::find_elements(), libMesh::UnstructuredMesh::find_neighbors(), libMesh::DofMap::first_dof(), libMesh::DofMap::first_old_dof(), libMesh::RBEIMEvaluation::gather_bfs(), libMesh::Nemesis_IO_Helper::get_cmap_params(), libMesh::Nemesis_IO_Helper::get_eb_info_global(), libMesh::Nemesis_IO_Helper::get_elem_cmap(), libMesh::Nemesis_IO_Helper::get_elem_map(), libMesh::MeshBase::get_info(), libMesh::DofMap::get_info(), libMesh::Nemesis_IO_Helper::get_init_global(), libMesh::Nemesis_IO_Helper::get_init_info(), libMesh::Nemesis_IO_Helper::get_loadbal_param(), libMesh::DofMap::get_local_constraints(), libMesh::Nemesis_IO_Helper::get_node_cmap(), libMesh::Nemesis_IO_Helper::get_node_map(), libMesh::Nemesis_IO_Helper::get_ns_param_global(), libMesh::Nemesis_IO_Helper::get_ss_param_global(), libMesh::SparsityPattern::Build::handle_vi_vj(), libMesh::LaplaceMeshSmoother::init(), libMesh::SystemSubsetBySubdomain::init(), libMesh::PetscDMWrapper::init_and_attach_petscdm(), HeatSystem::init_data(), libMesh::ExodusII_IO_Helper::initialize(), libMesh::ExodusII_IO_Helper::initialize_element_variables(), libMesh::ExodusII_IO_Helper::initialize_global_variables(), libMesh::ExodusII_IO_Helper::initialize_nodal_variables(), libMesh::DistributedMesh::insert_elem(), libMesh::DofMap::is_evaluable(), libMesh::SparsityPattern::Build::join(), libMesh::TransientRBEvaluation::legacy_write_offline_data_to_files(), libMesh::RBSCMEvaluation::legacy_write_offline_data_to_files(), libMesh::RBEvaluation::legacy_write_offline_data_to_files(), libMesh::MeshTools::libmesh_assert_consistent_distributed(), libMesh::MeshTools::libmesh_assert_consistent_distributed_nodes(), libMesh::MeshTools::libmesh_assert_contiguous_dof_ids(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Elem >(), libMesh::MeshTools::libmesh_assert_valid_neighbors(), libMesh::DistributedMesh::libmesh_assert_valid_parallel_object_ids(), libMesh::DofMap::local_variable_indices(), main(), libMesh::MeshRefinement::make_coarsening_compatible(), AugmentSparsityOnInterface::mesh_reinit(), libMesh::TriangulatorInterface::MeshedHole::MeshedHole(), libMesh::MeshBase::n_active_local_elem(), libMesh::BoundaryInfo::n_boundary_conds(), libMesh::BoundaryInfo::n_edge_conds(), libMesh::DofMap::n_local_dofs(), libMesh::System::n_local_dofs(), libMesh::MeshBase::n_local_elem(), libMesh::MeshBase::n_local_nodes(), libMesh::BoundaryInfo::n_nodeset_conds(), libMesh::BoundaryInfo::n_shellface_conds(), libMesh::RBEIMEvaluation::node_gather_bfs(), libMesh::SparsityPattern::Build::operator()(), libMesh::DistributedMesh::own_node(), libMesh::BoundaryInfo::parallel_sync_node_ids(), libMesh::BoundaryInfo::parallel_sync_side_ids(), libMesh::System::point_gradient(), libMesh::System::point_hessian(), libMesh::System::point_value(), libMesh::DofMap::print_dof_constraints(), libMesh::DofMap::process_mesh_constraint_rows(), libMesh::Nemesis_IO_Helper::put_cmap_params(), libMesh::Nemesis_IO_Helper::put_elem_cmap(), libMesh::Nemesis_IO_Helper::put_elem_map(), libMesh::Nemesis_IO_Helper::put_loadbal_param(), libMesh::Nemesis_IO_Helper::put_node_cmap(), libMesh::Nemesis_IO_Helper::put_node_map(), libMesh::NameBasedIO::read(), libMesh::Nemesis_IO::read(), read(), libMesh::CheckpointIO::read(), libMesh::EquationSystems::read(), libMesh::ExodusII_IO_Helper::read_elem_num_map(), libMesh::ExodusII_IO_Helper::read_global_values(), libMesh::ExodusII_IO::read_header(), libMesh::CheckpointIO::read_header(), read_header(), libMesh::System::read_header(), libMesh::System::read_legacy_data(), libMesh::DynaIO::read_mesh(), libMesh::ExodusII_IO_Helper::read_node_num_map(), libMesh::System::read_parallel_data(), libMesh::TransientRBConstruction::read_riesz_representors_from_files(), libMesh::RBConstruction::read_riesz_representors_from_files(), libMesh::System::read_SCALAR_dofs(), read_serialized_bc_names(), read_serialized_bcs_helper(), libMesh::System::read_serialized_blocked_dof_objects(), read_serialized_connectivity(), libMesh::System::read_serialized_data(), read_serialized_nodes(), read_serialized_nodesets(), read_serialized_subdomain_names(), libMesh::System::read_serialized_vector(), libMesh::System::read_serialized_vectors(), libMesh::Nemesis_IO_Helper::read_var_names_impl(), libMesh::DistributedMesh::renumber_dof_objects(), libMesh::DistributedMesh::renumber_nodes_and_elements(), libMesh::DofMap::scatter_constraints(), libMesh::CheckpointIO::select_split_config(), libMesh::DistributedMesh::set_next_unique_id(), libMesh::DofMap::set_nonlocal_dof_objects(), libMesh::PetscDMWrapper::set_point_range_in_section(), libMesh::RBEIMEvaluation::side_gather_bfs(), ExodusTest< elem_type >::test_read_gold(), ExodusTest< elem_type >::test_write(), MeshInputTest::testAbaqusRead(), MeshInputTest::testCopyElementSolutionImpl(), MeshInputTest::testCopyElementVectorImpl(), MeshInputTest::testCopyNodalSolutionImpl(), DefaultCouplingTest::testCoupling(), PointNeighborCouplingTest::testCoupling(), MeshInputTest::testDynaFileMappings(), MeshInputTest::testDynaNoSplines(), MeshInputTest::testDynaReadElem(), MeshInputTest::testDynaReadPatch(), MeshInputTest::testExodusFileMappings(), MeshInputTest::testExodusIGASidesets(), MeshInputTest::testExodusWriteElementDataFromDiscontinuousNodalData(), MeshInputTest::testLowOrderEdgeBlocks(), SystemsTest::testProjectMatrix1D(), SystemsTest::testProjectMatrix2D(), SystemsTest::testProjectMatrix3D(), BoundaryInfoTest::testShellFaceConstraints(), MeshInputTest::testSingleElementImpl(), WriteVecAndScalar::testSolution(), CheckpointIOTest::testSplitter(), MeshInputTest::testTetgenIO(), libMesh::MeshTools::total_weight(), libMesh::MeshRefinement::uniformly_coarsen(), libMesh::DistributedMesh::update_parallel_id_counts(), libMesh::DTKAdapter::update_variable_values(), libMesh::NameBasedIO::write(), write(), libMesh::CheckpointIO::write(), libMesh::EquationSystems::write(), libMesh::GMVIO::write_discontinuous_gmv(), libMesh::ExodusII_IO::write_element_data(), libMesh::ExodusII_IO_Helper::write_element_values(), libMesh::ExodusII_IO_Helper::write_element_values_element_major(), libMesh::ExodusII_IO_Helper::write_elements(), libMesh::ExodusII_IO_Helper::write_elemset_data(), libMesh::ExodusII_IO_Helper::write_elemsets(), libMesh::ExodusII_IO::write_global_data(), libMesh::ExodusII_IO_Helper::write_global_values(), libMesh::System::write_header(), libMesh::ExodusII_IO::write_information_records(), libMesh::ExodusII_IO_Helper::write_information_records(), libMesh::ExodusII_IO_Helper::write_nodal_coordinates(), libMesh::UCDIO::write_nodal_data(), libMesh::VTKIO::write_nodal_data(), libMesh::ExodusII_IO::write_nodal_data(), libMesh::ExodusII_IO::write_nodal_data_common(), libMesh::ExodusII_IO::write_nodal_data_discontinuous(), libMesh::ExodusII_IO_Helper::write_nodal_values(), libMesh::ExodusII_IO_Helper::write_nodeset_data(), libMesh::Nemesis_IO_Helper::write_nodesets(), libMesh::ExodusII_IO_Helper::write_nodesets(), libMesh::RBEIMEvaluation::write_out_interior_basis_functions(), libMesh::RBEIMEvaluation::write_out_node_basis_functions(), libMesh::RBEIMEvaluation::write_out_side_basis_functions(), write_output_solvedata(), libMesh::System::write_parallel_data(), libMesh::RBConstruction::write_riesz_representors_to_files(), libMesh::System::write_SCALAR_dofs(), write_serialized_bc_names(), write_serialized_bcs_helper(), libMesh::System::write_serialized_blocked_dof_objects(), write_serialized_connectivity(), libMesh::System::write_serialized_data(), write_serialized_nodes(), write_serialized_nodesets(), write_serialized_subdomain_names(), libMesh::System::write_serialized_vector(), libMesh::System::write_serialized_vectors(), libMesh::ExodusII_IO_Helper::write_sideset_data(), libMesh::Nemesis_IO_Helper::write_sidesets(), libMesh::ExodusII_IO_Helper::write_sidesets(), libMesh::ExodusII_IO::write_timestep(), libMesh::ExodusII_IO_Helper::write_timestep(), and libMesh::ExodusII_IO::write_timestep_discontinuous().
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This method implements reading a mesh from a specified file.
We are future proofing the layout of this file by adding in size information for all stored types. TODO: All types are stored as the same size. Use the size information to pack things efficiently. For now we will assume that "type size" is how the entire file will be encoded.
Implements libMesh::MeshInput< MeshBase >.
Definition at line 1420 of file xdr_io.C.
References _field_width, binary(), TIMPI::Communicator::broadcast(), libMesh::ParallelObject::comm(), libMesh::Xdr::data(), libMesh::DECODE, legacy(), libMesh::MeshInput< MeshBase >::mesh(), libMesh::MeshInput< MT >::mesh(), libMesh::MeshTools::n_elem(), n_nodes, libMesh::ParallelObject::processor_id(), libMesh::READ, read_header(), read_serialized_connectivity(), read_serialized_edge_bcs(), read_serialized_nodes(), read_serialized_nodesets(), read_serialized_shellface_bcs(), read_serialized_side_bcs(), read_serialized_subdomain_names(), libMesh::Partitioner::set_node_processor_ids(), value, version(), version_at_least_0_9_2(), version_at_least_1_1_0(), and version_at_least_1_3_0().
Referenced by libMesh::NameBasedIO::read().
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Read header information - templated to handle old (4-byte) or new (8-byte) header id types.
We are future proofing the layout of this file by adding in size information for all stored types. TODO: All types are stored as the same size. Use the size information to pack things efficiently. For now we will assume that "type size" is how the entire file will be encoded.
Definition at line 1552 of file xdr_io.C.
References _field_width, libMesh::MeshBase::add_elem_integers(), libMesh::MeshBase::add_elemset_code(), libMesh::MeshBase::add_node_integers(), boundary_condition_file_name(), TIMPI::Communicator::broadcast(), libMesh::ParallelObject::comm(), libMesh::Xdr::data(), libMesh::index_range(), libMesh::MeshInput< MT >::mesh(), libMesh::MeshInput< MeshBase >::mesh(), libMesh::MeshTools::n_elem(), n_nodes, libMesh::ParallelObject::n_processors(), partition_map_file_name(), polynomial_level_file_name(), libMesh::ParallelObject::processor_id(), libMesh::MeshBase::reserve_elem(), libMesh::MeshBase::reserve_nodes(), libMesh::MeshInput< MeshBase >::set_n_partitions(), subdomain_map_file_name(), version_at_least_0_9_2(), and version_at_least_1_8_0().
Referenced by read().
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Read boundary names information (sideset and nodeset) - NEW in 0.9.2 format.
Definition at line 2371 of file xdr_io.C.
References TIMPI::Communicator::broadcast(), libMesh::ParallelObject::comm(), libMesh::Xdr::data(), libMesh::ParallelObject::processor_id(), version_at_least_0_9_2(), and version_at_least_1_3_0().
Referenced by read_serialized_bcs_helper(), and read_serialized_nodesets().
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Helper function used in read_serialized_side_bcs, read_serialized_edge_bcs, and read_serialized_shellface_bcs.
Definition at line 2192 of file xdr_io.C.
References libMesh::BoundaryInfo::add_edge(), libMesh::BoundaryInfo::add_shellface(), libMesh::BoundaryInfo::add_side(), boundary_condition_file_name(), TIMPI::Communicator::broadcast(), libMesh::ParallelObject::comm(), libMesh::Xdr::data(), libMesh::Xdr::data_stream(), libMesh::MeshBase::get_boundary_info(), libMesh::MeshTools::Generation::Private::idx(), io_blksize, libMesh::libmesh_assert(), libMesh::MeshInput< MeshBase >::mesh(), libMesh::MeshInput< MT >::mesh(), libMesh::ParallelObject::processor_id(), libMesh::MeshBase::query_elem_ptr(), read_serialized_bc_names(), libMesh::Xdr::reading(), and version_at_least_1_3_0().
Referenced by read_serialized_edge_bcs(), read_serialized_shellface_bcs(), and read_serialized_side_bcs().
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Read the connectivity for a parallel, distributed mesh.
Definition at line 1727 of file xdr_io.C.
References libMesh::MeshBase::add_elem(), libMesh::MeshBase::add_node(), TIMPI::Communicator::broadcast(), libMesh::Node::build(), libMesh::Elem::build(), libMesh::ParallelObject::comm(), libMesh::Xdr::data(), libMesh::Xdr::data_stream(), libMesh::MeshBase::elem_ptr(), libMesh::MeshInput< MeshBase >::elems_of_dimension, libMesh::Elem::INACTIVE, libMesh::DofObject::invalid_id, io_blksize, libMesh::Elem::JUST_REFINED, libMesh::libmesh_assert(), libMesh::MeshInput< MT >::mesh(), libMesh::MeshInput< MeshBase >::mesh(), libMesh::MeshBase::mesh_dimension(), libMesh::MeshTools::n_elem(), libMesh::DofObject::n_extra_integers(), partition_map_file_name(), polynomial_level_file_name(), libMesh::ParallelObject::processor_id(), libMesh::MeshBase::query_node_ptr(), libMesh::Xdr::reading(), libMesh::DofObject::set_extra_integer(), libMesh::MeshBase::set_mesh_dimension(), subdomain_map_file_name(), libMesh::Elem::type_to_n_nodes_map, version_at_least_0_9_2(), and version_at_least_1_8_0().
Referenced by read().
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Read the edge boundary conditions for a parallel, distributed mesh.
NEW in 1.1.0 format.
Definition at line 2291 of file xdr_io.C.
References read_serialized_bcs_helper().
Referenced by read().
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Read the nodal locations for a parallel, distributed mesh.
Definition at line 1968 of file xdr_io.C.
References _field_width, TIMPI::Communicator::broadcast(), libMesh::ParallelObject::comm(), libMesh::Xdr::data(), libMesh::Xdr::data_stream(), libMesh::MeshTools::Generation::Private::idx(), io_blksize, libMesh::libmesh_assert(), libMesh::libmesh_isnan(), libMesh::MeshInput< MT >::mesh(), libMesh::MeshInput< MeshBase >::mesh(), libMesh::MeshBase::n_elem(), n_nodes, libMesh::MeshBase::n_nodes(), libMesh::MeshBase::node_ref(), libMesh::ParallelObject::processor_id(), libMesh::Xdr::reading(), libMesh::DofObject::set_extra_integer(), libMesh::MeshBase::set_next_unique_id(), libMesh::DofObject::set_unique_id(), version_at_least_0_9_6(), and version_at_least_1_8_0().
Referenced by read().
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Read the nodeset conditions for a parallel, distributed mesh.
Definition at line 2307 of file xdr_io.C.
References libMesh::BoundaryInfo::add_node(), boundary_condition_file_name(), TIMPI::Communicator::broadcast(), libMesh::ParallelObject::comm(), libMesh::Xdr::data(), libMesh::Xdr::data_stream(), libMesh::MeshBase::get_boundary_info(), libMesh::MeshTools::Generation::Private::idx(), io_blksize, libMesh::libmesh_assert(), libMesh::MeshInput< MeshBase >::mesh(), libMesh::MeshInput< MT >::mesh(), libMesh::ParallelObject::processor_id(), libMesh::MeshBase::query_node_ptr(), read_serialized_bc_names(), libMesh::Xdr::reading(), and version_at_least_1_3_0().
Referenced by read().
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Read the "shell face" boundary conditions for a parallel, distributed mesh.
NEW in 1.1.0 format.
Definition at line 2299 of file xdr_io.C.
References read_serialized_bcs_helper().
Referenced by read().
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Read the side boundary conditions for a parallel, distributed mesh.
Definition at line 2283 of file xdr_io.C.
References read_serialized_bcs_helper().
Referenced by read().
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Read subdomain name information - NEW in 0.9.2 format.
Definition at line 1664 of file xdr_io.C.
References TIMPI::Communicator::broadcast(), libMesh::ParallelObject::comm(), libMesh::Xdr::data(), libMesh::MeshInput< MT >::mesh(), libMesh::MeshInput< MeshBase >::mesh(), libMesh::ParallelObject::processor_id(), libMesh::MeshBase::set_subdomain_name_map(), version_at_least_0_9_2(), and version_at_least_1_3_0().
Referenced by read().
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Insist that we should write parallel files if and only if the mesh is an already distributed DistributedMesh.
Definition at line 410 of file xdr_io.h.
References _write_parallel, and _write_serial.
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Sets the number of partitions in the mesh.
Typically this gets done by the partitioner, but some parallel file formats begin "pre-partitioned".
Definition at line 101 of file mesh_input.h.
References libMesh::MeshInput< MT >::mesh().
Referenced by libMesh::Nemesis_IO::read(), and read_header().
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Insist that we should/shouldn't write parallel files.
Definition at line 400 of file xdr_io.h.
References _write_parallel, and _write_serial.
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Reads input from in
, skipping all the lines that start with the character comment_start
.
Definition at line 187 of file mesh_input.h.
Referenced by libMesh::TetGenIO::read(), and libMesh::UCDIO::read_implementation().
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Get/Set the subdomain file name.
Definition at line 158 of file xdr_io.h.
References _subdomain_map_file.
Referenced by read_header(), read_serialized_connectivity(), write(), and write_serialized_connectivity().
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Get/Set the version string.
Valid version strings:
* "libMesh-0.7.0+" * "libMesh-0.7.0+ parallel" *
If "libMesh" is not detected in the version string the LegacyXdrIO
class will be used to read older (pre version 0.7.0) mesh files.
Definition at line 140 of file xdr_io.h.
References _version.
Referenced by read(), version_at_least_0_9_2(), version_at_least_0_9_6(), version_at_least_1_1_0(), version_at_least_1_3_0(), version_at_least_1_8_0(), and write().
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bool libMesh::XdrIO::version_at_least_0_9_2 | ( | ) | const |
true
if the current file has an XDR/XDA version that matches or exceeds 0.9.2.As of this version we encode integer field widths, nodesets, subdomain names, boundary names, and element unique_id values (if they exist) into our files.
Definition at line 2470 of file xdr_io.C.
References version().
Referenced by read(), read_header(), read_serialized_bc_names(), read_serialized_connectivity(), and read_serialized_subdomain_names().
bool libMesh::XdrIO::version_at_least_0_9_6 | ( | ) | const |
true
if the current file has an XDR/XDA version that matches or exceeds 0.9.6.In this version we add node unique_id values to our files, if they exist.
Definition at line 2480 of file xdr_io.C.
References version().
Referenced by read_serialized_nodes().
bool libMesh::XdrIO::version_at_least_1_1_0 | ( | ) | const |
true
if the current file has an XDR/XDA version that matches or exceeds 1.1.0.In this version we add edge and shellface boundary conditions to our files.
Definition at line 2489 of file xdr_io.C.
References version().
Referenced by read().
bool libMesh::XdrIO::version_at_least_1_3_0 | ( | ) | const |
true
if the current file has an XDR/XDA version that matches or exceeds 1.3.0.In this version we fix handling of uint64_t binary values on Linux, which were previously miswritten as 32 bit via xdr_long.
Definition at line 2497 of file xdr_io.C.
References version().
Referenced by read(), read_serialized_bc_names(), read_serialized_bcs_helper(), read_serialized_nodesets(), and read_serialized_subdomain_names().
bool libMesh::XdrIO::version_at_least_1_8_0 | ( | ) | const |
true
if the current file has an XDR/XDA version that matches or exceeds 1.8.0.In this version we added support for writing the Mesh's "extra" integer fields to the file.
Definition at line 2504 of file xdr_io.C.
References version().
Referenced by read_header(), read_serialized_connectivity(), and read_serialized_nodes().
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This method implements writing a mesh to a specified file.
Implements libMesh::MeshOutput< MeshBase >.
Definition at line 111 of file xdr_io.C.
References _write_unique_id, TIMPI::Communicator::barrier(), binary(), boundary_condition_file_name(), libMesh::Xdr::close(), libMesh::ParallelObject::comm(), libMesh::Xdr::data(), libMesh::ENCODE, libMesh::MeshBase::get_boundary_info(), libMesh::MeshBase::get_elem_integer_name(), libMesh::MeshBase::get_elemset_codes(), libMesh::MeshBase::get_elemsets(), libMesh::MeshBase::get_node_integer_name(), legacy(), libMesh::MeshBase::max_node_id(), libMesh::MeshInput< MeshBase >::mesh(), libMesh::MeshOutput< MT >::mesh(), libMesh::BoundaryInfo::n_boundary_conds(), libMesh::BoundaryInfo::n_edge_conds(), libMesh::MeshTools::n_elem(), libMesh::MeshBase::n_elem(), libMesh::MeshBase::n_elem_integers(), libMesh::MeshBase::n_node_integers(), libMesh::BoundaryInfo::n_nodeset_conds(), libMesh::MeshTools::n_p_levels(), libMesh::BoundaryInfo::n_shellface_conds(), libMesh::MeshBase::n_subdomains(), libMesh::out, partition_map_file_name(), polynomial_level_file_name(), libMesh::ParallelObject::processor_id(), subdomain_map_file_name(), version(), libMesh::WRITE, write_parallel(), write_serialized_connectivity(), write_serialized_edge_bcs(), write_serialized_nodes(), write_serialized_nodesets(), write_serialized_shellface_bcs(), write_serialized_side_bcs(), and write_serialized_subdomain_names().
Referenced by libMesh::ErrorVector::plot_error(), and libMesh::NameBasedIO::write().
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This method implements writing a mesh with discontinuous data to a specified file where the data is taken from the EquationSystems
object.
Definition at line 89 of file mesh_output.C.
References libMesh::EquationSystems::build_discontinuous_solution_vector(), libMesh::EquationSystems::build_variable_names(), libMesh::EquationSystems::get_mesh(), libMesh::libmesh_assert(), and libMesh::out.
Referenced by libMesh::ExodusII_IO::write_timestep_discontinuous().
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This method implements writing a mesh with data to a specified file where the data is taken from the EquationSystems
object.
Reimplemented in libMesh::NameBasedIO.
Definition at line 31 of file mesh_output.C.
References libMesh::EquationSystems::build_solution_vector(), libMesh::EquationSystems::build_variable_names(), libMesh::EquationSystems::get_mesh(), libMesh::libmesh_assert(), and libMesh::out.
Referenced by libMesh::Nemesis_IO::write_timestep(), and libMesh::ExodusII_IO::write_timestep().
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This method implements writing a mesh with nodal data to a specified file where the nodal data and variable names are provided.
Reimplemented in libMesh::ExodusII_IO, libMesh::Nemesis_IO, libMesh::GmshIO, libMesh::NameBasedIO, libMesh::VTKIO, libMesh::UCDIO, libMesh::GMVIO, libMesh::MEDITIO, libMesh::GnuPlotIO, and libMesh::TecplotIO.
Definition at line 109 of file mesh_output.h.
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This method may be overridden by "parallel" output formats for writing nodal data.
Instead of getting a localized copy of the nodal solution vector, it is passed a NumericVector of type=PARALLEL which is in node-major order i.e. (u0,v0,w0, u1,v1,w1, u2,v2,w2, u3,v3,w3, ...) and contains n_nodes*n_vars total entries. Then, it is up to the individual I/O class to extract the required solution values from this vector and write them in parallel.
If not implemented, localizes the parallel vector into a std::vector and calls the other version of this function.
Reimplemented in libMesh::Nemesis_IO.
Definition at line 149 of file mesh_output.C.
References libMesh::NumericVector< T >::localize().
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This method should be overridden by "parallel" output formats for writing nodal data.
Instead of getting a localized copy of the nodal solution vector, it directly uses EquationSystems current_local_solution vectors to look up nodal values.
If not implemented, reorders the solutions into a nodal-only NumericVector and calls the above version of this function.
Reimplemented in libMesh::Nemesis_IO.
Definition at line 162 of file mesh_output.C.
References libMesh::EquationSystems::build_parallel_solution_vector(), and libMesh::EquationSystems::build_variable_names().
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This method implements writing a mesh with discontinuous data to a specified file where the nodal data and variables names are provided.
Reimplemented in libMesh::ExodusII_IO.
Definition at line 118 of file mesh_output.h.
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Report whether we should write parallel files.
Definition at line 379 of file xdr_io.h.
References _write_parallel, _write_serial, libMesh::MeshBase::is_serial(), libMesh::libmesh_assert(), libMesh::MeshInput< MeshBase >::mesh(), and libMesh::MeshOutput< MT >::mesh().
Referenced by write().
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Write boundary names information (sideset and nodeset) - NEW in 0.9.2 format.
Definition at line 1380 of file xdr_io.C.
References libMesh::Xdr::data(), libMesh::Quality::name(), and libMesh::ParallelObject::processor_id().
Referenced by write_serialized_bcs_helper(), and write_serialized_nodesets().
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Helper function used in write_serialized_side_bcs, write_serialized_edge_bcs, and write_serialized_shellface_bcs.
Definition at line 1163 of file xdr_io.C.
References libMesh::as_range(), libMesh::BoundaryInfo::boundary_ids(), libMesh::ParallelObject::comm(), libMesh::Xdr::data(), libMesh::Xdr::data_stream(), libMesh::BoundaryInfo::edge_boundary_ids(), TIMPI::Communicator::gather(), libMesh::MeshBase::get_boundary_info(), libMesh::MeshTools::Generation::Private::idx(), libMesh::BoundaryInfo::invalid_id, libMesh::libmesh_assert(), libMesh::make_range(), libMesh::MeshInput< MeshBase >::mesh(), libMesh::MeshOutput< MT >::mesh(), libMesh::ParallelObject::n_processors(), libMesh::ParallelObject::processor_id(), TIMPI::Communicator::receive(), TIMPI::Communicator::send(), libMesh::BoundaryInfo::shellface_boundary_ids(), write_serialized_bc_names(), and libMesh::Xdr::writing().
Referenced by write_serialized_edge_bcs(), write_serialized_shellface_bcs(), and write_serialized_side_bcs().
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Write the connectivity for a parallel, distributed mesh.
Definition at line 330 of file xdr_io.C.
References _write_unique_id, libMesh::as_range(), libMesh::ParallelObject::comm(), libMesh::Xdr::data(), libMesh::Xdr::data_stream(), TIMPI::Communicator::gather(), libMesh::DofObject::invalid_id, libMesh::libmesh_assert(), libMesh::make_range(), libMesh::MeshInput< MeshBase >::mesh(), libMesh::MeshOutput< MT >::mesh(), libMesh::MeshTools::n_active_levels(), libMesh::MeshTools::n_elem(), libMesh::MeshBase::n_elem(), n_nodes, libMesh::ParallelObject::n_processors(), pack_element(), partition_map_file_name(), polynomial_level_file_name(), libMesh::ParallelObject::processor_id(), TIMPI::Communicator::receive(), TIMPI::Communicator::send(), subdomain_map_file_name(), TIMPI::Communicator::sum(), and libMesh::Xdr::writing().
Referenced by write().
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Write the edge boundary conditions for a parallel, distributed mesh.
NEW in 1.1.0 format.
Definition at line 1292 of file xdr_io.C.
References write_serialized_bcs_helper().
Referenced by write().
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Write the nodal locations for a parallel, distributed mesh.
Definition at line 692 of file xdr_io.C.
References libMesh::ParallelObject::comm(), libMesh::Xdr::data(), libMesh::Xdr::data_stream(), TIMPI::Communicator::gather(), libMesh::DofObject::get_extra_integer(), TIMPI::Communicator::get_unique_tag(), libMesh::DofObject::id(), libMesh::MeshTools::Generation::Private::idx(), libMesh::index_range(), io_blksize, libMesh::make_range(), libMesh::MeshBase::max_node_id(), libMesh::MeshInput< MeshBase >::mesh(), libMesh::MeshOutput< MT >::mesh(), libMesh::ParallelObject::n_processors(), libMesh::ParallelObject::processor_id(), TIMPI::Communicator::receive(), TIMPI::Communicator::send(), and libMesh::DofObject::unique_id().
Referenced by write().
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Write the boundary conditions for a parallel, distributed mesh.
Definition at line 1306 of file xdr_io.C.
References libMesh::BoundaryInfo::boundary_ids(), libMesh::ParallelObject::comm(), libMesh::Xdr::data(), libMesh::Xdr::data_stream(), TIMPI::Communicator::gather(), libMesh::MeshBase::get_boundary_info(), libMesh::MeshTools::Generation::Private::idx(), libMesh::BoundaryInfo::invalid_id, libMesh::libmesh_assert(), libMesh::make_range(), libMesh::MeshInput< MeshBase >::mesh(), libMesh::MeshOutput< MT >::mesh(), libMesh::ParallelObject::n_processors(), libMesh::ParallelObject::processor_id(), TIMPI::Communicator::receive(), TIMPI::Communicator::send(), write_serialized_bc_names(), and libMesh::Xdr::writing().
Referenced by write().
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Write the "shell face" boundary conditions for a parallel, distributed mesh.
NEW in 1.1.0 format.
Definition at line 1299 of file xdr_io.C.
References write_serialized_bcs_helper().
Referenced by write().
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Write the side boundary conditions for a parallel, distributed mesh.
Definition at line 1285 of file xdr_io.C.
References write_serialized_bcs_helper().
Referenced by write().
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Write subdomain name information - NEW in 0.9.2 format.
Definition at line 291 of file xdr_io.C.
References libMesh::Xdr::data(), libMesh::MeshBase::get_subdomain_name_map(), libMesh::MeshInput< MeshBase >::mesh(), libMesh::MeshOutput< MT >::mesh(), libMesh::Quality::name(), and libMesh::ParallelObject::processor_id().
Referenced by write().
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Definition at line 363 of file xdr_io.h.
Referenced by boundary_condition_file_name().
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Definition at line 120 of file parallel_object.h.
Referenced by libMesh::EquationSystems::build_parallel_elemental_solution_vector(), libMesh::EquationSystems::build_parallel_solution_vector(), libMesh::ParallelObject::comm(), libMesh::ParallelObject::n_processors(), libMesh::ParallelObject::operator=(), libMesh::ParallelObject::processor_id(), and libMesh::BoundaryInfo::regenerate_id_sets().
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Definition at line 361 of file xdr_io.h.
Referenced by read(), read_header(), and read_serialized_nodes().
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Flag specifying whether this format is parallel-capable.
If this is false (default) I/O is only permitted when the mesh has been serialized.
Definition at line 184 of file mesh_output.h.
Referenced by libMesh::FroIO::write(), libMesh::PostscriptIO::write(), and libMesh::EnsightIO::write().
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Definition at line 366 of file xdr_io.h.
Referenced by polynomial_level_file_name().
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Definition at line 364 of file xdr_io.h.
Referenced by partition_map_file_name().
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Flag specifying whether this format can be written by only serializing the mesh to processor zero.
If this is false (default) the mesh will be serialized to all processors
Definition at line 193 of file mesh_output.h.
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Definition at line 365 of file xdr_io.h.
Referenced by subdomain_map_file_name().
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Definition at line 359 of file xdr_io.h.
Referenced by set_auto_parallel(), set_write_parallel(), and write_parallel().
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Definition at line 358 of file xdr_io.h.
Referenced by set_auto_parallel(), set_write_parallel(), and write_parallel().
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Definition at line 360 of file xdr_io.h.
Referenced by write(), and write_serialized_connectivity().
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A vector of bools describing what dimension elements have been encountered when reading a mesh.
Definition at line 107 of file mesh_input.h.
Referenced by libMesh::GMVIO::_read_one_cell(), libMesh::UNVIO::elements_in(), libMesh::UNVIO::max_elem_dimension_seen(), libMesh::AbaqusIO::max_elem_dimension_seen(), libMesh::AbaqusIO::read(), libMesh::GMVIO::read(), libMesh::Nemesis_IO::read(), libMesh::ExodusII_IO::read(), libMesh::VTKIO::read(), libMesh::AbaqusIO::read_elements(), libMesh::UCDIO::read_implementation(), libMesh::UNVIO::read_implementation(), and read_serialized_connectivity().
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Define the block size to use for chunked IO.
Definition at line 371 of file xdr_io.h.
Referenced by read_serialized_bcs_helper(), read_serialized_connectivity(), read_serialized_nodes(), read_serialized_nodesets(), and write_serialized_nodes().