Moose::Kokkos::System Class Reference

The Kokkos base system class. More...

#include <KokkosSystem.h>

Inheritance diagram for Moose::Kokkos::System:

Classes
struct	Sparsity
	CSR format sparsity data. More...

Public Member Functions
	System (SystemBase &system)
	Constructor.
	System (const System &src)=default
	Defaulted copy constructor Used by FESystem in mixed FE+FV simulations.
void	sync (const MemcpyType dir)
	Synchronize the active tagged vectors and matrices between host and device.
void	setActiveVariables (const std::set< MooseVariableFieldBase * > &vars)
	Set the active variables.
void	setActiveSolutionTags (const std::set< TagID > &tags)
	Set the active solution tags.
void	setActiveResidualTags (const std::set< TagID > &tags)
	Set the active residual tags.
void	setActiveMatrixTags (const std::set< TagID > &tags)
	Set the active matrix tags.
void	clearActiveVariables ()
	Clear the cached active variables.
void	clearActiveSolutionTags ()
	Clear the cached active solution tags.
void	clearActiveResidualTags ()
	Clear the cached active residual tags.
void	clearActiveMatrixTags ()
	Clear the cached active matrix tags.
const libMesh::DofMap &	getDofMap () const
	Get the libMesh DOF map.
const Parallel::Communicator &	getComm () const
	Get the libMesh communicator.
const Array< Array< dof_id_type > > &	getLocalCommList () const
	Get the list of local DOF indices to communicate.
const Array< Array< dof_id_type > > &	getGhostCommList () const
	Get the list of ghost DOF indices to communicate.
const Sparsity &	getSparsity () const
	Get the sparisty pattern data.
void	buildCooIndices (std::vector< PetscInt > &coo_i, std::vector< PetscInt > &coo_j) const
	Build the COO index arrays describing the sparsity pattern.
KOKKOS_FUNCTION bool	isScalarVariable (unsigned int var) const
	Check whether a variable is scalar.
KOKKOS_FUNCTION bool	isVariableActive (unsigned int var, ContiguousSubdomainID subdomain) const
	Check whether a variable is active on a subdomain.
KOKKOS_FUNCTION bool	isResidualTagActive (TagID tag) const
	Check whether a residual tag is active.
KOKKOS_FUNCTION bool	isMatrixTagActive (TagID tag) const
	Check whether a matrix tag is active.
KOKKOS_FUNCTION dof_id_type	getNumLocalDofs () const
	Get the number of local DOFs.
KOKKOS_FUNCTION dof_id_type	getNumGhostDofs () const
	Get the number of ghost DOFs.
KOKKOS_FUNCTION unsigned int	getNumScalarDofs (unsigned int var) const
	Get the number of DOFs of a scalar variable.
KOKKOS_FUNCTION dof_id_type	getElemLocalDofIndex (ContiguousElementID elem, unsigned int i, unsigned int var) const
	Get the local DOF index of a variable for an element.
KOKKOS_FUNCTION dof_id_type	getScalarLocalDofIndex (unsigned int i, unsigned int var) const
	Get the local DOF index of a scalar variable.
KOKKOS_FUNCTION dof_id_type	getElemGlobalDofIndex (ContiguousElementID elem, unsigned int i, unsigned int var) const
	Get the global DOF index of a variable for an element.
KOKKOS_FUNCTION dof_id_type	getScalarGlobalDofIndex (unsigned int i, unsigned int var) const
	Get the global DOF index of a scalar variable.
KOKKOS_FUNCTION dof_id_type	localToGlobalDofIndex (dof_id_type dof) const
	Get the global DOF index of a local DOF index.
KOKKOS_FUNCTION Vector &	getVector (TagID tag) const
	Get a tagged Kokkos vector.
KOKKOS_FUNCTION Matrix &	getMatrix (TagID tag) const
	Get a tagged Kokkos matrix.
KOKKOS_FUNCTION Real &	getVectorDofValue (const dof_id_type dof, const TagID tag) const
	Get the DOF value of a tagged vector.
KOKKOS_FUNCTION Real &	getMatrixValue (dof_id_type row, dof_id_type col, TagID tag) const
	Get an entry from a tagged matrix.
PerfGraph &	perfGraph ()
	Get the PerfGraph.
KOKKOS_FUNCTION const Mesh &	kokkosMesh () const
	Get the const reference of the Kokkos mesh.
void	sync (const std::set< TagID > &tags, const MemcpyType dir)
	Synchronize the specified tagged vectors between host and device.
void	sync (const std::vector< TagID > &tags, const MemcpyType dir)
void	sync (const TagID tag, const MemcpyType dir)
SystemBase &	getSystem ()
	Get the MOOSE system.
const SystemBase &	getSystem () const

Static Public Member Functions
static InputParameters	validParams ()

Protected Member Functions
PerfID	registerTimedSection (const std::string &section_name, const unsigned int level) const
	Call to register a named section for timing.
PerfID	registerTimedSection (const std::string &section_name, const unsigned int level, const std::string &live_message, const bool print_dots=true) const
	Call to register a named section for timing.
std::string	timedSectionName (const std::string &section_name) const

Protected Attributes
SystemBase &	_system
	Reference of the MOOSE system.
const MooseMesh &	_mesh
	Reference of the MOOSE mesh.
const libMesh::DofMap &	_dof_map
	Reference of the libMesh DOF map.
const Parallel::Communicator &	_comm
	Reference of the libMesh communicator.
const unsigned int	_num_vars
	Number of variables.
const dof_id_type	_num_local_dofs
	Number of local DOFs.
const dof_id_type	_num_ghost_dofs
	Number of ghost DOFs.
Array< Array2D< dof_id_type > >	_local_elem_dof_index
	Local element DOF indices of each variable.
Array< Array< dof_id_type > >	_scalar_dof_index
	DOF indices of each scalar variable.
Array< dof_id_type >	_local_to_global_dof_index
	Map from local DOF index to global DOF index.
Array< unsigned int >	_max_dofs_per_elem
	Maximum number of DOFs per element for each variable.
Array< bool >	_var_is_scalar
	Whether each variable is scalar.
Array2D< bool >	_var_subdomain_active
	Whether each variable is active on subdomains.
Array< unsigned int >	_active_variables
	List of active variable numbers.
MooseApp &	_pg_moose_app
	The MooseApp that owns the PerfGraph.
const std::string	_prefix
	A prefix to use for all sections.
Array< Vector >	_vectors
	Kokkos vectors and matrices on device.
Array< Matrix >	_matrices
Array< TagID >	_active_solution_tags
	List of active tags.
Array< TagID >	_active_residual_tags
Array< TagID >	_active_matrix_tags
Array< bool >	_residual_tag_active
	Flag whether each tag is active.
Array< bool >	_matrix_tag_active
Array< Array< dof_id_type > >	_local_comm_list
	List of DOFs to send and receive.
Array< Array< dof_id_type > >	_ghost_comm_list

Private Member Functions
void	setupVariables ()
	Setup variable data.
void	setupDofs ()
	Setup DOF data.
void	setupSparsity ()
	Setup sparsity data.

Private Attributes
Sparsity	_sparsity
	Matrix sparsity pattern data.
const Mesh &	_mesh_host
	Host reference of the Kokkos mesh.
const Mesh	_mesh_device
	Device copy of the Kokkos mesh.

Detailed Description

The Kokkos base system class.

Each system in MOOSE has a corresponding Kokkos base system.

Definition at line 30 of file KokkosSystem.h.

Constructor & Destructor Documentation

System() [1/2]

Moose::Kokkos::System::System

(

SystemBase &

system

)

Constructor.

Parameters

system

The associated MOOSE system

System() [2/2]

Moose::Kokkos::System::System ( const System &  src )

default

Defaulted copy constructor Used by FESystem in mixed FE+FV simulations.

Member Function Documentation

buildCooIndices()

void Moose::Kokkos::System::buildCooIndices	(	std::vector< PetscInt > &	coo_i,
		std::vector< PetscInt > &	coo_j
	)		const

Build the COO index arrays describing the sparsity pattern.

PETSc consumes these arrays destructively, so a fresh pair is needed for each matrix preallocated from this system. The arrays are resized to the number of nonzeros and fully overwritten, which lets one allocation be reused across the matrices.

Parameters

coo_i	The row index of each nonzero
coo_j	The column index of each nonzero

clearActiveMatrixTags()

void Moose::Kokkos::System::clearActiveMatrixTags ( )

inline

Clear the cached active matrix tags.

Definition at line 117 of file KokkosSystem.h.

  {
    _active_matrix_tags.destroy();
    _matrix_tag_active = false;
  }

clearActiveResidualTags()

void Moose::Kokkos::System::clearActiveResidualTags ( )

inline

Clear the cached active residual tags.

Definition at line 108 of file KokkosSystem.h.

  {
    _active_residual_tags.destroy();
    _residual_tag_active = false;
  }

clearActiveSolutionTags()

void Moose::Kokkos::System::clearActiveSolutionTags ( )

inline

Clear the cached active solution tags.

Definition at line 103 of file KokkosSystem.h.

{ _active_solution_tags.destroy(); }

clearActiveVariables()

void Moose::Kokkos::System::clearActiveVariables ( )

inline

Clear the cached active variables.

Definition at line 98 of file KokkosSystem.h.

{ _active_variables.destroy(); }

getComm()

const Parallel::Communicator & Moose::Kokkos::System::getComm ( ) const

inline

Get the libMesh communicator.

Returns

The libMesh communicator

Definition at line 142 of file KokkosSystem.h.

{ return _comm; }

getDofMap()

const libMesh::DofMap & Moose::Kokkos::System::getDofMap ( ) const

inline

Get the libMesh DOF map.

Returns

The libMesh DOF map

Definition at line 136 of file KokkosSystem.h.

{ return _dof_map; }

getElemGlobalDofIndex()

KOKKOS_FUNCTION dof_id_type Moose::Kokkos::System::getElemGlobalDofIndex ( ContiguousElementID  elem, unsigned int  i, unsigned int  var  ) const

inline

Get the global DOF index of a variable for an element.

Parameters

elem	The contiguous element ID
i	The element-local DOF index
var	The variable number

Returns

The global DOF index

Definition at line 260 of file KokkosSystem.h.

  {
    return _local_to_global_dof_index[getElemLocalDofIndex(elem, i, var)];
  }

getElemLocalDofIndex()

KOKKOS_FUNCTION dof_id_type Moose::Kokkos::System::getElemLocalDofIndex ( ContiguousElementID  elem, unsigned int  i, unsigned int  var  ) const

inline

Get the local DOF index of a variable for an element.

Parameters

elem	The contiguous element ID
i	The element-local DOF index
var	The variable number

Returns

The local DOF index

Definition at line 235 of file KokkosSystem.h.

  {
    return _local_elem_dof_index[var](i, elem);
  }

Referenced by getElemGlobalDofIndex(), Moose::Kokkos::FESystem::getVectorQpADGrad(), Moose::Kokkos::FESystem::getVectorQpADGradFace(), Moose::Kokkos::FESystem::getVectorQpADValue(), Moose::Kokkos::FESystem::getVectorQpADValueFace(), Moose::Kokkos::FESystem::getVectorQpGradFace(), Moose::Kokkos::FESystem::getVectorQpValueFace(), Moose::Kokkos::FESystem::getVectorQpVectorGradFace(), and Moose::Kokkos::FESystem::getVectorQpVectorValueFace().

getGhostCommList()

const Array< Array< dof_id_type > > & Moose::Kokkos::System::getGhostCommList ( ) const

inline

Get the list of ghost DOF indices to communicate.

Returns

The list of ghost DOF indices to communicate

Definition at line 154 of file KokkosSystem.h.

{ return _ghost_comm_list; }

getLocalCommList()

const Array< Array< dof_id_type > > & Moose::Kokkos::System::getLocalCommList ( ) const

inline

Get the list of local DOF indices to communicate.

Returns

The list of local DOF indices to communicate

Definition at line 148 of file KokkosSystem.h.

{ return _local_comm_list; }

getMatrix()

KOKKOS_FUNCTION Matrix & Moose::Kokkos::System::getMatrix ( TagID  tag ) const

inline

Get a tagged Kokkos matrix.

Parameters

tag	The matrix tag

Returns

The Kokkos matrix

Definition at line 300 of file KokkosSystem.h.

{ return _matrices[tag]; }

getMatrixValue()

KOKKOS_FUNCTION Real & Moose::Kokkos::System::getMatrixValue ( dof_id_type  row, dof_id_type  col, TagID  tag  ) const

inline

Get an entry from a tagged matrix.

Parameters

row	The local row index
col	The global column index
tag	The matrix tag

Returns

The entry from the tagged matrix

Definition at line 320 of file KokkosSystem.h.

  {
    return _matrices[tag](row, col);
  }

getNumGhostDofs()

KOKKOS_FUNCTION dof_id_type Moose::Kokkos::System::getNumGhostDofs ( ) const

inline

Get the number of ghost DOFs.

Returns

The number of ghost DOFs

Definition at line 216 of file KokkosSystem.h.

{ return _num_ghost_dofs; }

getNumLocalDofs()

KOKKOS_FUNCTION dof_id_type Moose::Kokkos::System::getNumLocalDofs ( ) const

inline

Get the number of local DOFs.

Returns

The number of local DOFs

Definition at line 210 of file KokkosSystem.h.

{ return _num_local_dofs; }

getNumScalarDofs()

KOKKOS_FUNCTION unsigned int Moose::Kokkos::System::getNumScalarDofs ( unsigned int  var ) const

inline

Get the number of DOFs of a scalar variable.

Parameters

var	The variable number

Returns

The number of scalar DOFs

Definition at line 223 of file KokkosSystem.h.

  {
    return _scalar_dof_index[var].size();
  }

getScalarGlobalDofIndex()

KOKKOS_FUNCTION dof_id_type Moose::Kokkos::System::getScalarGlobalDofIndex ( unsigned int  i, unsigned int  var  ) const

inline

Get the global DOF index of a scalar variable.

Parameters

i	The scalar DOF index
var	The variable number

Returns

The global DOF index

Definition at line 273 of file KokkosSystem.h.

  {
    return _local_to_global_dof_index[getScalarLocalDofIndex(i, var)];
  }

getScalarLocalDofIndex()

KOKKOS_FUNCTION dof_id_type Moose::Kokkos::System::getScalarLocalDofIndex ( unsigned int  i, unsigned int  var  ) const

inline

Get the local DOF index of a scalar variable.

Parameters

i	The scalar DOF index
var	The variable number

Returns

The local DOF index

Definition at line 248 of file KokkosSystem.h.

  {
    return _scalar_dof_index[var][i];
  }

Referenced by Moose::Kokkos::VariableValueTempl< is_ad >::get(), and getScalarGlobalDofIndex().

getSparsity()

const Sparsity & Moose::Kokkos::System::getSparsity ( ) const

inline

Get the sparisty pattern data.

Returns

The sparisty pattern data

Definition at line 160 of file KokkosSystem.h.

{ return _sparsity; }

getSystem() [1/2]

SystemBase & Moose::Kokkos::System::getSystem ( )

inline

Get the MOOSE system.

Returns

The MOOSE system

Definition at line 128 of file KokkosSystem.h.

{ return _system; }

getSystem() [2/2]

const SystemBase & Moose::Kokkos::System::getSystem ( ) const

inline

Definition at line 129 of file KokkosSystem.h.

{ return _system; }

getVector()

KOKKOS_FUNCTION Vector & Moose::Kokkos::System::getVector ( TagID  tag ) const

inline

Get a tagged Kokkos vector.

Parameters

tag	The vector tag

Returns

The Kokkos vector

Definition at line 293 of file KokkosSystem.h.

{ return _vectors[tag]; }

getVectorDofValue()

KOKKOS_FUNCTION Real & Moose::Kokkos::System::getVectorDofValue ( const dof_id_type  dof, const TagID  tag  ) const

inline

Get the DOF value of a tagged vector.

Parameters

dof	The local DOF index
tag	The vector tag

Returns

The DOF value

Definition at line 308 of file KokkosSystem.h.

  {
    return _vectors[tag][dof];
  }

Referenced by Moose::Kokkos::FESystem::getVectorQpGradFace(), Moose::Kokkos::FESystem::getVectorQpValueFace(), Moose::Kokkos::FESystem::getVectorQpVectorGradFace(), and Moose::Kokkos::FESystem::getVectorQpVectorValueFace().

isMatrixTagActive()

KOKKOS_FUNCTION bool Moose::Kokkos::System::isMatrixTagActive ( TagID  tag ) const

inline

Check whether a matrix tag is active.

Parameters

tag	The matrix tag

Returns

Whether the matrix tag is active

Definition at line 204 of file KokkosSystem.h.

{ return _matrix_tag_active[tag]; }

isResidualTagActive()

KOKKOS_FUNCTION bool Moose::Kokkos::System::isResidualTagActive ( TagID  tag ) const

inline

Check whether a residual tag is active.

Parameters

tag	The residual tag

Returns

Whether the residual tag is active

Definition at line 197 of file KokkosSystem.h.

{ return _residual_tag_active[tag]; }

isScalarVariable()

KOKKOS_FUNCTION bool Moose::Kokkos::System::isScalarVariable ( unsigned int  var ) const

inline

Check whether a variable is scalar.

Parameters

var	The variable number

Returns

Whether the variable is scalar

Definition at line 179 of file KokkosSystem.h.

{ return _var_is_scalar[var]; }

isVariableActive()

KOKKOS_FUNCTION bool Moose::Kokkos::System::isVariableActive ( unsigned int  var, ContiguousSubdomainID  subdomain  ) const

inline

Check whether a variable is active on a subdomain.

Parameters

var	The variable number
subdomain	The contiguous subdomain ID

Returns

Whether the variable is active

Definition at line 187 of file KokkosSystem.h.

  {
    return _var_subdomain_active(var, subdomain);
  }

kokkosMesh()

KOKKOS_FUNCTION const Mesh & Moose::Kokkos::MeshHolder::kokkosMesh ( ) const

inlineinherited

Get the const reference of the Kokkos mesh.

Returns

The const reference of the Kokkos mesh depending on the architecture this function is being called on

Definition at line 651 of file KokkosMesh.h.

  {
    KOKKOS_IF_ON_HOST(
        if (!_mesh_host.initialized()) mooseError(
            "kokkosMesh() was called too early. Kokkos mesh is available after problem "
            "initialization. Override initialSetup() if you need to setup your object data "
            "using the Kokkos mesh.");
 
        return _mesh_host;)
 
    return _mesh_device;
  }

Referenced by Moose::Kokkos::Assembly::computePhysicalMap(), Moose::Kokkos::Assembly::computePhysicalMap(), Moose::Kokkos::LinearFVFluxKernel::operator()(), Moose::Kokkos::LinearFVBoundaryCondition::operator()(), Moose::Kokkos::LinearFVFluxKernel::operator()(), Moose::Kokkos::LinearFVBoundaryCondition::operator()(), Moose::Kokkos::LinearFVFluxKernel::operator()(), Moose::Kokkos::LinearFVFluxKernel::operator()(), Moose::Kokkos::LinearFVElementalKernel::operator()(), Moose::Kokkos::IntegratedBC::operator()(), Moose::Kokkos::VectorIntegratedBC::operator()(), Moose::Kokkos::Kernel::operator()(), Moose::Kokkos::VectorKernel::operator()(), Moose::Kokkos::IntegratedBC::operator()(), Moose::Kokkos::Kernel::operator()(), Moose::Kokkos::LinearFVElementalKernel::operator()(), Moose::Kokkos::Datum::q_point(), and KokkosBoundNodalKernel::skipOnBoundary().

localToGlobalDofIndex()

KOKKOS_FUNCTION dof_id_type Moose::Kokkos::System::localToGlobalDofIndex ( dof_id_type  dof ) const

inline

Get the global DOF index of a local DOF index.

Parameters

dof	The local DOF index

Returns

The global DOF index

Definition at line 283 of file KokkosSystem.h.

  {
    return _local_to_global_dof_index[dof];
  }

perfGraph()

PerfGraph & PerfGraphInterface::perfGraph ( )

inherited

Get the PerfGraph.

Definition at line 86 of file PerfGraphInterface.C.

{
  return _pg_moose_app.perfGraph();
}

Referenced by CommonOutputAction::act(), PerfGraphData::finalize(), PerfGraphReporter::finalize(), and PerfGraphOutput::output().

registerTimedSection() [1/2]

PerfID PerfGraphInterface::registerTimedSection ( const std::string &  section_name, const unsigned int  level  ) const

protectedinherited

Call to register a named section for timing.

Parameters

section_name	The name of the code section to be timed
level	The importance of the timer - lower is more important (0 will always come out)

Returns

The ID of the section - use when starting timing

Definition at line 61 of file PerfGraphInterface.C.

{
  const auto timed_section_name = timedSectionName(section_name);
  if (!moose::internal::getPerfGraphRegistry().sectionExists(timed_section_name))
    return moose::internal::getPerfGraphRegistry().registerSection(timed_section_name, level);
  else
    return moose::internal::getPerfGraphRegistry().sectionID(timed_section_name);
}

registerTimedSection() [2/2]

PerfID PerfGraphInterface::registerTimedSection ( const std::string &  section_name, const unsigned int  level, const std::string &  live_message, const bool  print_dots = true  ) const

protectedinherited

Call to register a named section for timing.

Parameters

section_name	The name of the code section to be timed
level	The importance of the timer - lower is more important (0 will always come out)
live_message	The message to be printed to the screen during execution
print_dots	Whether or not progress dots should be printed for this section

Returns

The ID of the section - use when starting timing

Definition at line 72 of file PerfGraphInterface.C.

{
  const auto timed_section_name = timedSectionName(section_name);
  if (!moose::internal::getPerfGraphRegistry().sectionExists(timed_section_name))
    return moose::internal::getPerfGraphRegistry().registerSection(
        timedSectionName(section_name), level, live_message, print_dots);
  else
    return moose::internal::getPerfGraphRegistry().sectionID(timed_section_name);
}

setActiveMatrixTags()

void Moose::Kokkos::System::setActiveMatrixTags

(

const std::set< TagID > &

tags

)

Set the active matrix tags.

Parameters

vars	The active matrix tags

setActiveResidualTags()

void Moose::Kokkos::System::setActiveResidualTags

(

const std::set< TagID > &

tags

)

Set the active residual tags.

Parameters

tags	The active residual tags

setActiveSolutionTags()

void Moose::Kokkos::System::setActiveSolutionTags

(

const std::set< TagID > &

tags

)

Set the active solution tags.

Parameters

tags	The active solution tags

setActiveVariables()

void Moose::Kokkos::System::setActiveVariables

(

const std::set< MooseVariableFieldBase * > &

vars

)

Set the active variables.

Parameters

vars	The active MOOSE variables

setupDofs()

void Moose::Kokkos::System::setupDofs ( )

private

Setup DOF data.

setupSparsity()

void Moose::Kokkos::System::setupSparsity ( )

private

Setup sparsity data.

setupVariables()

void Moose::Kokkos::System::setupVariables ( )

private

Setup variable data.

sync() [1/4]

void Moose::Kokkos::System::sync

(

const MemcpyType

dir

)

Synchronize the active tagged vectors and matrices between host and device.

Parameters

dir	Copy direction

sync() [2/4]

void Moose::Kokkos::System::sync	(	const std::set< TagID > &	tags,
		const MemcpyType	dir
	)

Synchronize the specified tagged vectors between host and device.

Parameters

tags	The vector tags
dir	Copy direction

sync() [3/4]

void Moose::Kokkos::System::sync	(	const std::vector< TagID > &	tags,
		const MemcpyType	dir
	)

sync() [4/4]

void Moose::Kokkos::System::sync	(	const TagID	tag,
		const MemcpyType	dir
	)

timedSectionName()

std::string PerfGraphInterface::timedSectionName ( const std::string &  section_name ) const

protectedinherited

Returns

The name of the timed section with the name section_name.

Optionally adds a prefix if one is defined.

Definition at line 55 of file PerfGraphInterface.C.

{
  return _prefix.empty() ? "" : (_prefix + "::") + section_name;
}

Referenced by PerfGraphInterface::registerTimedSection(), and PerfGraphInterface::registerTimedSection().

validParams()

InputParameters PerfGraphInterface::validParams ( )

staticinherited

Definition at line 16 of file PerfGraphInterface.C.

{
  InputParameters params = emptyInputParameters();
  return params;
}

Referenced by Convergence::validParams().

Member Data Documentation

_active_matrix_tags

Array<TagID> Moose::Kokkos::System::_active_matrix_tags

protected

Definition at line 412 of file KokkosSystem.h.

Referenced by clearActiveMatrixTags().

_active_residual_tags

Array<TagID> Moose::Kokkos::System::_active_residual_tags

protected

Definition at line 411 of file KokkosSystem.h.

Referenced by clearActiveResidualTags().

_active_solution_tags

Array<TagID> Moose::Kokkos::System::_active_solution_tags

protected

List of active tags.

Definition at line 410 of file KokkosSystem.h.

Referenced by clearActiveSolutionTags().

_active_variables

Array<unsigned int> Moose::Kokkos::System::_active_variables

protected

List of active variable numbers.

Definition at line 404 of file KokkosSystem.h.

Referenced by clearActiveVariables().

_comm

const Parallel::Communicator& Moose::Kokkos::System::_comm

protected

Reference of the libMesh communicator.

Definition at line 346 of file KokkosSystem.h.

Referenced by getComm().

_dof_map

const libMesh::DofMap& Moose::Kokkos::System::_dof_map

protected

Reference of the libMesh DOF map.

Definition at line 341 of file KokkosSystem.h.

Referenced by getDofMap().

_ghost_comm_list

Array<Array<dof_id_type> > Moose::Kokkos::System::_ghost_comm_list

protected

Definition at line 428 of file KokkosSystem.h.

Referenced by getGhostCommList().

_local_comm_list

Array<Array<dof_id_type> > Moose::Kokkos::System::_local_comm_list

protected

List of DOFs to send and receive.

Definition at line 427 of file KokkosSystem.h.

Referenced by getLocalCommList().

_local_elem_dof_index

Array<Array2D<dof_id_type> > Moose::Kokkos::System::_local_elem_dof_index

protected

Local element DOF indices of each variable.

Definition at line 374 of file KokkosSystem.h.

Referenced by getElemLocalDofIndex().

_local_to_global_dof_index

Array<dof_id_type> Moose::Kokkos::System::_local_to_global_dof_index

protected

Map from local DOF index to global DOF index.

Definition at line 384 of file KokkosSystem.h.

Referenced by getElemGlobalDofIndex(), Moose::Kokkos::FESystem::getNodeGlobalDofIndex(), getScalarGlobalDofIndex(), Moose::Kokkos::FESystem::getVectorDofADValue(), and localToGlobalDofIndex().

_matrices

Array<Matrix> Moose::Kokkos::System::_matrices

protected

Definition at line 368 of file KokkosSystem.h.

Referenced by getMatrix(), and getMatrixValue().

_matrix_tag_active

Array<bool> Moose::Kokkos::System::_matrix_tag_active

protected

Definition at line 420 of file KokkosSystem.h.

Referenced by clearActiveMatrixTags(), and isMatrixTagActive().

_max_dofs_per_elem

Array<unsigned int> Moose::Kokkos::System::_max_dofs_per_elem

protected

Maximum number of DOFs per element for each variable.

Definition at line 389 of file KokkosSystem.h.

_mesh

const MooseMesh& Moose::Kokkos::System::_mesh

protected

Reference of the MOOSE mesh.

Definition at line 336 of file KokkosSystem.h.

_mesh_device

const Mesh Moose::Kokkos::MeshHolder::_mesh_device

privateinherited

Device copy of the Kokkos mesh.

Definition at line 673 of file KokkosMesh.h.

Referenced by Moose::Kokkos::MeshHolder::kokkosMesh().

_mesh_host

const Mesh& Moose::Kokkos::MeshHolder::_mesh_host

privateinherited

Host reference of the Kokkos mesh.

Definition at line 669 of file KokkosMesh.h.

Referenced by Moose::Kokkos::MeshHolder::kokkosMesh().

_num_ghost_dofs

const dof_id_type Moose::Kokkos::System::_num_ghost_dofs

protected

Number of ghost DOFs.

Definition at line 361 of file KokkosSystem.h.

Referenced by getNumGhostDofs().

_num_local_dofs

const dof_id_type Moose::Kokkos::System::_num_local_dofs

protected

Number of local DOFs.

Definition at line 356 of file KokkosSystem.h.

Referenced by getNumLocalDofs().

_num_vars

const unsigned int Moose::Kokkos::System::_num_vars

protected

Number of variables.

Definition at line 351 of file KokkosSystem.h.

_pg_moose_app

MooseApp& PerfGraphInterface::_pg_moose_app

protectedinherited

The MooseApp that owns the PerfGraph.

Definition at line 135 of file PerfGraphInterface.h.

Referenced by PerfGraphInterface::perfGraph().

_prefix

const std::string PerfGraphInterface::_prefix

protectedinherited

A prefix to use for all sections.

Definition at line 138 of file PerfGraphInterface.h.

Referenced by PerfGraphInterface::timedSectionName().

_residual_tag_active

Array<bool> Moose::Kokkos::System::_residual_tag_active

protected

Flag whether each tag is active.

Definition at line 419 of file KokkosSystem.h.

Referenced by clearActiveResidualTags(), and isResidualTagActive().

_scalar_dof_index

Array<Array<dof_id_type> > Moose::Kokkos::System::_scalar_dof_index

protected

DOF indices of each scalar variable.

Definition at line 379 of file KokkosSystem.h.

Referenced by getNumScalarDofs(), and getScalarLocalDofIndex().

_sparsity

Sparsity Moose::Kokkos::System::_sparsity

private

Matrix sparsity pattern data.

Definition at line 450 of file KokkosSystem.h.

Referenced by getSparsity().

_system

SystemBase& Moose::Kokkos::System::_system

protected

Reference of the MOOSE system.

Definition at line 331 of file KokkosSystem.h.

Referenced by getSystem(), and getSystem().

_var_is_scalar

Array<bool> Moose::Kokkos::System::_var_is_scalar

protected

Whether each variable is scalar.

Definition at line 394 of file KokkosSystem.h.

Referenced by isScalarVariable().

_var_subdomain_active

Array2D<bool> Moose::Kokkos::System::_var_subdomain_active

protected

Whether each variable is active on subdomains.

Definition at line 399 of file KokkosSystem.h.

Referenced by isVariableActive().

_vectors

Array<Vector> Moose::Kokkos::System::_vectors

protected

Kokkos vectors and matrices on device.

Definition at line 367 of file KokkosSystem.h.

Referenced by getVector(), Moose::Kokkos::FESystem::getVectorDofADValue(), and getVectorDofValue().

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The documentation for this class was generated from the following file:

• include/kokkos/systems/KokkosSystem.h