FEMParameters Class Reference

#include <femparameters.h>

Inheritance diagram for FEMParameters:

Public Member Functions
	FEMParameters (const libMesh::Parallel::Communicator &comm_in)
	~FEMParameters ()
void	read (GetPot &input, const std::vector< std::string > *other_variable_names=nullptr)
	FEMParameters (const libMesh::Parallel::Communicator &comm_in)
	~FEMParameters ()
void	read (GetPot &input, const std::vector< std::string > *other_variable_names=nullptr)
	FEMParameters (const libMesh::Parallel::Communicator &comm_in)
	~FEMParameters ()
void	read (GetPot &input, const std::vector< std::string > *other_variable_names=nullptr)
	FEMParameters (const libMesh::Parallel::Communicator &comm_in)
	~FEMParameters ()
void	read (GetPot &input, const std::vector< std::string > *other_variable_names=nullptr)
	FEMParameters (const libMesh::Parallel::Communicator &comm_in)
	~FEMParameters ()
void	read (GetPot &input, const std::vector< std::string > *other_variable_names=nullptr)
	FEMParameters (const libMesh::Parallel::Communicator &comm_in)
	~FEMParameters ()
void	read (GetPot &input, const std::vector< std::string > *other_variable_names=nullptr)
	FEMParameters (const libMesh::Parallel::Communicator &comm_in)
	~FEMParameters ()
void	read (GetPot &input, const std::vector< std::string > *other_variable_names=nullptr)
const Parallel::Communicator &	comm () const
processor_id_type	n_processors () const
processor_id_type	processor_id () const

Public Attributes
unsigned int	initial_timestep
unsigned int	n_timesteps
bool	transient
unsigned int	deltat_reductions
std::string	timesolver_core
std::string	solution_history_type
libMesh::Real	end_time
libMesh::Real	deltat
libMesh::Real	timesolver_theta
libMesh::Real	timesolver_maxgrowth
libMesh::Real	timesolver_tolerance
libMesh::Real	timesolver_upper_tolerance
libMesh::Real	steadystate_tolerance
std::vector< libMesh::FEMNormType >	timesolver_norm
unsigned int	dimension
std::string	domaintype
std::string	domainfile
std::string	elementtype
libMesh::Real	elementorder
libMesh::Real	domain_xmin
libMesh::Real	domain_ymin
libMesh::Real	domain_zmin
libMesh::Real	domain_edge_width
libMesh::Real	domain_edge_length
libMesh::Real	domain_edge_height
unsigned int	coarsegridx
unsigned int	coarsegridy
unsigned int	coarsegridz
unsigned int	coarserefinements
unsigned int	extrarefinements
std::string	mesh_redistribute_func
std::string	mesh_partitioner_type
unsigned int	nelem_target
libMesh::Real	global_tolerance
libMesh::Real	refine_fraction
libMesh::Real	coarsen_fraction
libMesh::Real	coarsen_threshold
unsigned int	max_adaptivesteps
unsigned int	initial_adaptivesteps
unsigned int	write_interval
bool	write_gmv_error
bool	write_tecplot_error
bool	write_exodus_error
bool	output_xda
bool	output_xdr
bool	output_bz2
bool	output_gz
bool	output_gmv
bool	output_tecplot
bool	output_exodus
bool	output_nemesis
std::vector< std::string >	system_types
std::vector< libMesh::PeriodicBoundary >	periodic_boundaries
std::map< libMesh::subdomain_id_type, libMesh::FunctionBase< libMesh::Number > * >	initial_conditions
std::map< libMesh::boundary_id_type, libMesh::FunctionBase< libMesh::Number > * >	dirichlet_conditions
std::map< libMesh::boundary_id_type, libMesh::FunctionBase< libMesh::Number > * >	neumann_conditions
std::map< libMesh::boundary_id_type, std::vector< unsigned int > >	dirichlet_condition_variables
std::map< libMesh::boundary_id_type, std::vector< unsigned int > >	neumann_condition_variables
std::map< int, std::map< libMesh::subdomain_id_type, libMesh::FunctionBase< libMesh::Number > * > >	other_interior_functions
std::map< int, std::map< libMesh::boundary_id_type, libMesh::FunctionBase< libMesh::Number > * > >	other_boundary_functions
bool	run_simulation
bool	run_postprocess
std::vector< std::string >	fe_family
std::vector< unsigned int >	fe_order
int	extra_quadrature_order
bool	analytic_jacobians
libMesh::Real	verify_analytic_jacobians
libMesh::Real	numerical_jacobian_h
bool	print_solution_norms
bool	print_solutions
bool	print_residual_norms
bool	print_residuals
bool	print_jacobian_norms
bool	print_jacobians
bool	print_element_solutions
bool	print_element_residuals
bool	print_element_jacobians
bool	constrain_in_solver
bool	use_petsc_snes
bool	time_solver_quiet
bool	solver_quiet
bool	solver_verbose
bool	reuse_preconditioner
bool	require_residual_reduction
libMesh::Real	min_step_length
unsigned int	max_linear_iterations
unsigned int	max_nonlinear_iterations
libMesh::Real	relative_step_tolerance
libMesh::Real	relative_residual_tolerance
libMesh::Real	absolute_residual_tolerance
double	initial_linear_tolerance
double	minimum_linear_tolerance
double	linear_tolerance_multiplier
unsigned int	initial_sobolev_order
unsigned int	initial_extra_quadrature
bool	refine_uniformly
std::string	indicator_type
bool	patch_reuse
unsigned int	sobolev_order
std::string	system_config_file

Protected Attributes
const Parallel::Communicator &	_communicator

Detailed Description

Definition at line 22 of file femparameters.h.

Constructor & Destructor Documentation

FEMParameters() [1/7]

FEMParameters::FEMParameters

(

const libMesh::Parallel::Communicator &

comm_in

)

Definition at line 26 of file femparameters.C.

                                                                 :
  ParallelObject(comm_in),
  initial_timestep(0), n_timesteps(100),
  transient(true),
  deltat_reductions(0),
  timesolver_core("euler"),
  solution_history_type("memory"),
  end_time(std::numeric_limits<Real>::max()),
  deltat(0.0001), timesolver_theta(0.5),
  timesolver_maxgrowth(0.), timesolver_tolerance(0.),
  timesolver_upper_tolerance(0.),
  steadystate_tolerance(0.),
  timesolver_norm(0, L2),
 
  dimension(2),
  domaintype("square"), domainfile("mesh.xda"), elementtype("quad"),
  elementorder(2),
  domain_xmin(0.0), domain_ymin(0.0), domain_zmin(0.0),
  domain_edge_width(1.0), domain_edge_length(1.0), domain_edge_height(1.0),
  coarsegridx(1), coarsegridy(1), coarsegridz(1),
  coarserefinements(0), extrarefinements(0),
  mesh_redistribute_func("0"),
 
  mesh_partitioner_type("Default"),
 
  nelem_target(8000), global_tolerance(0.0),
  refine_fraction(0.3), coarsen_fraction(0.3), coarsen_threshold(10),
  max_adaptivesteps(1),
  initial_adaptivesteps(0),
 
  write_interval(10),
  write_gmv_error(false), write_tecplot_error(false),
  write_exodus_error(false),
  output_xda(false), output_xdr(false),
  output_bz2(true), output_gz(true),
  output_gmv(false), output_tecplot(false),
  output_exodus(false), output_nemesis(false),
 
  system_types(0),
 
#ifdef LIBMESH_ENABLE_PERIODIC
  periodic_boundaries(0),
#endif
 
  run_simulation(true), run_postprocess(false),
 
  fe_family(1, "LAGRANGE"), fe_order(1, 1),
  extra_quadrature_order(0),
 
  analytic_jacobians(true), verify_analytic_jacobians(0.0),
  numerical_jacobian_h(TOLERANCE),
  print_solution_norms(false), print_solutions(false),
  print_residual_norms(false), print_residuals(false),
  print_jacobian_norms(false), print_jacobians(false),
  print_element_solutions(false),
  print_element_residuals(false),
  print_element_jacobians(false),
 
  constrain_in_solver(true),
  use_petsc_snes(false),
  time_solver_quiet(true), solver_quiet(true), solver_verbose(false),
  reuse_preconditioner(true),
  require_residual_reduction(true),
  min_step_length(1e-5),
  max_linear_iterations(200000), max_nonlinear_iterations(20),
  relative_step_tolerance(1.e-7), relative_residual_tolerance(1.e-10),
  absolute_residual_tolerance(1.e-10),
  initial_linear_tolerance(1.e-3), minimum_linear_tolerance(TOLERANCE*TOLERANCE),
  linear_tolerance_multiplier(1.e-3),
 
  initial_sobolev_order(1),
  initial_extra_quadrature(0),
  refine_uniformly(false),
  indicator_type("kelly"), patch_reuse(true), sobolev_order(1)
{
}

~FEMParameters() [1/7]

FEMParameters::~FEMParameters

(

)

Definition at line 103 of file femparameters.C.

{
  for (std::map<subdomain_id_type, FunctionBase<Number> *>::iterator
         i = initial_conditions.begin(); i != initial_conditions.end();
       ++i)
    delete i->second;
 
  for (std::map<boundary_id_type, FunctionBase<Number> *>::iterator
         i = dirichlet_conditions.begin(); i != dirichlet_conditions.end();
       ++i)
    delete i->second;
 
  for (std::map<boundary_id_type, FunctionBase<Number> *>::iterator
         i = neumann_conditions.begin(); i != neumann_conditions.end();
       ++i)
    delete i->second;
 
  for (std::map<int,
         std::map<boundary_id_type, FunctionBase<Number> *>
         >::iterator
         i = other_boundary_functions.begin(); i != other_boundary_functions.end();
       ++i)
    for (std::map<boundary_id_type, FunctionBase<Number> *>::iterator
           j = i->second.begin(); j != i->second.end();
         ++j)
      delete j->second;
 
  for (std::map<int,
         std::map<subdomain_id_type, FunctionBase<Number> *>
         >::iterator
         i = other_interior_functions.begin(); i != other_interior_functions.end();
       ++i)
    for (std::map<subdomain_id_type, FunctionBase<Number> *>::iterator
           j = i->second.begin(); j != i->second.end();
         ++j)
      delete j->second;
}

References dirichlet_conditions, initial_conditions, neumann_conditions, other_boundary_functions, and other_interior_functions.

FEMParameters() [2/7]

FEMParameters::FEMParameters

(

const libMesh::Parallel::Communicator &

comm_in

)

~FEMParameters() [2/7]

FEMParameters::~FEMParameters

(

)

FEMParameters() [3/7]

FEMParameters::FEMParameters

(

const libMesh::Parallel::Communicator &

comm_in

)

~FEMParameters() [3/7]

FEMParameters::~FEMParameters

(

)

FEMParameters() [4/7]

FEMParameters::FEMParameters

(

const libMesh::Parallel::Communicator &

comm_in

)

~FEMParameters() [4/7]

FEMParameters::~FEMParameters

(

)

FEMParameters() [5/7]

FEMParameters::FEMParameters

(

const libMesh::Parallel::Communicator &

comm_in

)

~FEMParameters() [5/7]

FEMParameters::~FEMParameters

(

)

FEMParameters() [6/7]

FEMParameters::FEMParameters

(

const libMesh::Parallel::Communicator &

comm_in

)

~FEMParameters() [6/7]

FEMParameters::~FEMParameters

(

)

FEMParameters() [7/7]

FEMParameters::FEMParameters

(

const libMesh::Parallel::Communicator &

comm_in

)

~FEMParameters() [7/7]

FEMParameters::~FEMParameters

(

)

Member Function Documentation

comm()

const Parallel::Communicator & libMesh::ParallelObject::comm ( ) const

inlineinherited

Returns

A reference to the Parallel::Communicator object used by this mesh.

Definition at line 97 of file parallel_object.h.

  { return _communicator; }

References libMesh::ParallelObject::_communicator.

Referenced by libMesh::__libmesh_petsc_diff_solver_jacobian(), libMesh::__libmesh_petsc_diff_solver_monitor(), libMesh::__libmesh_petsc_diff_solver_residual(), libMesh::ExactSolution::_compute_error(), libMesh::UniformRefinementEstimator::_estimate_error(), libMesh::Partitioner::_find_global_index_by_pid_map(), libMesh::BoundaryInfo::_find_id_maps(), libMesh::PetscLinearSolver< T >::_petsc_shell_matrix_get_diagonal(), libMesh::SlepcEigenSolver< T >::_petsc_shell_matrix_get_diagonal(), libMesh::PetscLinearSolver< T >::_petsc_shell_matrix_mult(), libMesh::SlepcEigenSolver< T >::_petsc_shell_matrix_mult(), libMesh::PetscLinearSolver< T >::_petsc_shell_matrix_mult_add(), libMesh::DofMap::add_constraints_to_send_list(), add_cube_convex_hull_to_mesh(), libMesh::PetscDMWrapper::add_dofs_helper(), libMesh::PetscDMWrapper::add_dofs_to_section(), libMesh::TransientRBConstruction::add_IC_to_RB_space(), libMesh::RBEIMEvaluation::add_interpolation_data(), libMesh::CondensedEigenSystem::add_matrices(), libMesh::EigenSystem::add_matrices(), libMesh::System::add_matrix(), libMesh::System::add_matrix(), libMesh::System::add_matrix(), libMesh::RBConstruction::add_scaled_matrix_and_vector(), libMesh::System::add_vector(), libMesh::MeshTools::Modification::all_tri(), libMesh::LaplaceMeshSmoother::allgather_graph(), libMesh::DofMap::allgather_recursive_constraints(), libMesh::RBConstruction::allocate_data_structures(), libMesh::TransientRBConstruction::allocate_data_structures(), libMesh::TransientRBConstruction::assemble_affine_expansion(), libMesh::AdvectionSystem::assemble_claw_rhs(), libMesh::FEMSystem::assemble_qoi(), libMesh::Nemesis_IO::assert_symmetric_cmaps(), libMesh::MeshCommunication::assign_global_indices(), libMesh::Partitioner::assign_partitioning(), libMesh::MeshTools::Generation::build_extrusion(), libMesh::Partitioner::build_graph(), libMesh::InfElemBuilder::build_inf_elem(), libMesh::BoundaryInfo::build_node_list_from_side_list(), libMesh::EquationSystems::build_parallel_elemental_solution_vector(), libMesh::EquationSystems::build_parallel_solution_vector(), libMesh::PetscDMWrapper::build_section(), libMesh::PetscDMWrapper::build_sf(), libMesh::MeshBase::cache_elem_data(), libMesh::DofMap::check_dirichlet_bcid_consistency(), libMesh::MeshTetInterface::check_hull_integrity(), libMesh::MeshBase::complete_preparation(), libMesh::RBConstruction::compute_Fq_representor_innerprods(), libMesh::RBConstruction::compute_max_error_bound(), libMesh::Nemesis_IO_Helper::compute_num_global_elem_blocks(), libMesh::Nemesis_IO_Helper::compute_num_global_nodesets(), libMesh::Nemesis_IO_Helper::compute_num_global_sidesets(), libMesh::RBConstruction::compute_output_dual_innerprods(), libMesh::RBConstruction::compute_residual_dual_norm_slow(), libMesh::RBSCMConstruction::compute_SCM_bounds_on_training_set(), libMesh::DofMap::computed_sparsity_already(), libMesh::Problem_Interface::computeJacobian(), libMesh::Problem_Interface::computePreconditioner(), PetscSolverConfiguration::configure_solver(), libMesh::ContinuationSystem::ContinuationSystem(), libMesh::MeshBase::copy_constraint_rows(), libMesh::ExodusII_IO::copy_elemental_solution(), libMesh::ExodusII_IO::copy_nodal_solution(), libMesh::ExodusII_IO::copy_scalar_solution(), libMesh::CondensedEigenSystem::copy_super_to_sub(), libMesh::MeshTools::correct_node_proc_ids(), libMesh::MeshTools::create_bounding_box(), libMesh::DofMap::create_dof_constraints(), libMesh::MeshTools::create_nodal_bounding_box(), libMesh::MeshRefinement::create_parent_error_vector(), libMesh::MeshTools::create_processor_bounding_box(), libMesh::MeshTools::create_subdomain_bounding_box(), libMesh::PetscMatrix< T >::create_submatrix_nosort(), create_wrapped_function(), libMesh::MeshCommunication::delete_remote_elements(), libMesh::MeshBase::detect_interior_parents(), libMesh::RBEIMEvaluation::distribute_bfs(), DMlibMeshFunction(), DMlibMeshJacobian(), DMlibMeshSetSystem_libMesh(), DMVariableBounds_libMesh(), libMesh::DTKSolutionTransfer::DTKSolutionTransfer(), libMesh::MeshRefinement::eliminate_unrefined_patches(), libMesh::RBEIMConstruction::enrich_eim_approximation_on_interiors(), libMesh::RBEIMConstruction::enrich_eim_approximation_on_nodes(), libMesh::RBEIMConstruction::enrich_eim_approximation_on_sides(), libMesh::TransientRBConstruction::enrich_RB_space(), libMesh::EpetraVector< T >::EpetraVector(), AssembleOptimization::equality_constraints(), libMesh::AdjointRefinementEstimator::estimate_error(), libMesh::ExactErrorEstimator::estimate_error(), libMesh::JumpErrorEstimator::estimate_error(), libMesh::PatchRecoveryErrorEstimator::estimate_error(), libMesh::WeightedPatchRecoveryErrorEstimator::estimate_error(), libMesh::SmoothnessEstimator::estimate_smoothness(), libMesh::MeshRefinement::flag_elements_by_elem_fraction(), libMesh::MeshRefinement::flag_elements_by_error_fraction(), libMesh::MeshRefinement::flag_elements_by_error_tolerance(), libMesh::MeshRefinement::flag_elements_by_mean_stddev(), libMesh::MeshRefinement::flag_elements_by_nelem_target(), libMesh::RBEIMEvaluation::gather_bfs(), libMesh::DofMap::gather_constraints(), libMesh::MeshfreeInterpolation::gather_remote_data(), libMesh::CondensedEigenSystem::get_eigenpair(), libMesh::RBEIMEvaluation::get_eim_basis_function_node_value(), libMesh::RBEIMEvaluation::get_eim_basis_function_side_value(), libMesh::RBEIMEvaluation::get_eim_basis_function_value(), libMesh::MeshBase::get_info(), libMesh::RBEIMEvaluation::get_interior_basis_functions_as_vecs(), libMesh::ImplicitSystem::get_linear_solver(), libMesh::RBEIMConstruction::get_max_abs_value(), libMesh::RBEIMConstruction::get_node_max_abs_value(), libMesh::RBEIMEvaluation::get_parametrized_function_node_value(), libMesh::RBEIMEvaluation::get_parametrized_function_side_value(), libMesh::RBEIMEvaluation::get_parametrized_function_value(), libMesh::RBEIMConstruction::get_random_point(), libMesh::RBEIMConstruction::get_random_point(), libMesh::RBEIMConstruction::get_random_point(), libMesh::MeshTetInterface::improve_hull_integrity(), AssembleOptimization::inequality_constraints(), AssembleOptimization::inequality_constraints_jacobian(), libMesh::StaticCondensation::init(), libMesh::TimeSolver::init(), libMesh::SystemSubsetBySubdomain::init(), libMesh::LocationMap< T >::init(), libMesh::PetscDMWrapper::init_and_attach_petscdm(), libMesh::PetscDMWrapper::init_and_attach_petscdm(), ElasticitySystem::init_data(), libMesh::AdvectionSystem::init_data(), libMesh::ClawSystem::init_data(), libMesh::PetscDMWrapper::init_petscdm(), libMesh::ExodusII_IO_Helper::initialize(), libMesh::OptimizationSystem::initialize_equality_constraints_storage(), libMesh::OptimizationSystem::initialize_inequality_constraints_storage(), libMesh::RBEIMConstruction::initialize_parametrized_functions_in_training_set(), libMesh::RBEIMConstruction::inner_product(), integrate_function(), libMesh::MeshTools::Modification::interpolate_surface(), libMesh::MeshTools::libmesh_assert_consistent_distributed(), libMesh::MeshTools::libmesh_assert_consistent_distributed_nodes(), libMesh::MeshTools::libmesh_assert_contiguous_dof_ids(), libMesh::MeshTools::libmesh_assert_equal_connectivity(), libMesh::MeshTools::libmesh_assert_equal_points(), libMesh::MeshTools::libmesh_assert_parallel_consistent_new_node_procids(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Elem >(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Node >(), libMesh::MeshTools::libmesh_assert_topology_consistent_procids< Node >(), libMesh::MeshTools::libmesh_assert_valid_boundary_ids(), libMesh::MeshTools::libmesh_assert_valid_constraint_rows(), libMesh::MeshTools::libmesh_assert_valid_dof_ids(), libMesh::MeshTools::libmesh_assert_valid_neighbors(), libMesh::DistributedMesh::libmesh_assert_valid_parallel_flags(), libMesh::DistributedMesh::libmesh_assert_valid_parallel_object_ids(), libMesh::DistributedMesh::libmesh_assert_valid_parallel_p_levels(), libMesh::MeshTools::libmesh_assert_valid_refinement_flags(), libMesh::MeshTools::libmesh_assert_valid_unique_ids(), libMesh::libmesh_petsc_linesearch_shellfunc(), libMesh::libmesh_petsc_preconditioner_apply(), libMesh::libmesh_petsc_snes_mffd_interface(), libMesh::libmesh_petsc_snes_postcheck(), libMesh::MeshRefinement::limit_level_mismatch_at_edge(), libMesh::MeshRefinement::limit_level_mismatch_at_node(), libMesh::MeshRefinement::limit_overrefined_boundary(), libMesh::MeshRefinement::limit_underrefined_boundary(), libMesh::LinearImplicitSystem::LinearImplicitSystem(), main(), libMesh::MeshCommunication::make_elems_parallel_consistent(), libMesh::MeshCommunication::make_new_node_proc_ids_parallel_consistent(), libMesh::MeshCommunication::make_new_nodes_parallel_consistent(), libMesh::MeshCommunication::make_node_bcids_parallel_consistent(), libMesh::MeshCommunication::make_node_ids_parallel_consistent(), libMesh::MeshCommunication::make_node_proc_ids_parallel_consistent(), libMesh::MeshCommunication::make_node_unique_ids_parallel_consistent(), libMesh::MeshCommunication::make_nodes_parallel_consistent(), libMesh::MeshCommunication::make_p_levels_parallel_consistent(), libMesh::TransientRBConstruction::mass_matrix_scaled_matvec(), libMesh::FEMSystem::mesh_position_set(), libMesh::TriangulatorInterface::MeshedHole::MeshedHole(), LinearElasticityWithContact::move_mesh(), libMesh::DistributedMesh::n_active_elem(), libMesh::MeshTools::n_active_levels(), libMesh::BoundaryInfo::n_boundary_conds(), libMesh::MeshTools::n_connected_components(), libMesh::DofMap::n_constrained_dofs(), libMesh::MeshBase::n_constraint_rows(), libMesh::DofMap::n_dofs(), libMesh::DofMap::n_dofs_per_processor(), libMesh::BoundaryInfo::n_edge_conds(), libMesh::CondensedEigenSystem::n_global_non_condensed_dofs(), libMesh::MeshTools::n_levels(), MixedOrderTest::n_neighbor_links(), libMesh::BoundaryInfo::n_nodeset_conds(), libMesh::SparsityPattern::Build::n_nonzeros(), libMesh::MeshTools::n_p_levels(), libMesh::BoundaryInfo::n_shellface_conds(), libMesh::RBEIMEvaluation::node_distribute_bfs(), libMesh::RBEIMEvaluation::node_gather_bfs(), libMesh::RBEIMConstruction::node_inner_product(), libMesh::PetscVector< T >::operator=(), libMesh::MeshBase::operator==(), libMesh::DistributedMesh::parallel_max_elem_id(), libMesh::DistributedMesh::parallel_max_node_id(), libMesh::DistributedMesh::parallel_max_unique_id(), libMesh::ReplicatedMesh::parallel_max_unique_id(), libMesh::DistributedMesh::parallel_n_elem(), libMesh::DistributedMesh::parallel_n_nodes(), libMesh::SparsityPattern::Build::parallel_sync(), libMesh::BoundaryInfo::parallel_sync_node_ids(), libMesh::BoundaryInfo::parallel_sync_side_ids(), libMesh::MeshTools::paranoid_n_levels(), libMesh::Partitioner::partition(), libMesh::Partitioner::partition_unpartitioned_elements(), libMesh::petsc_auto_fieldsplit(), LaplaceSystem::postprocess(), PoissonSystem::postprocess(), libMesh::MeshBase::print_constraint_rows(), libMesh::DofMap::print_dof_constraints(), libMesh::DofMap::process_mesh_constraint_rows(), libMesh::Partitioner::processor_pairs_to_interface_nodes(), libMesh::InterMeshProjection::project_system_vectors(), libMesh::XdrIO::read(), libMesh::Nemesis_IO::read(), read(), libMesh::EquationSystems::read(), libMesh::CheckpointIO::read_header(), libMesh::ExodusII_IO::read_header(), libMesh::System::read_header(), libMesh::XdrIO::read_header(), libMesh::RBEIMEvaluation::read_in_interior_basis_functions(), libMesh::RBEIMEvaluation::read_in_node_basis_functions(), libMesh::RBEIMEvaluation::read_in_side_basis_functions(), libMesh::RBEvaluation::read_in_vectors_from_multiple_files(), libMesh::RBConstruction::read_riesz_representors_from_files(), libMesh::TransientRBConstruction::read_riesz_representors_from_files(), libMesh::System::read_SCALAR_dofs(), libMesh::XdrIO::read_serialized_bc_names(), libMesh::XdrIO::read_serialized_bcs_helper(), libMesh::System::read_serialized_blocked_dof_objects(), libMesh::XdrIO::read_serialized_connectivity(), libMesh::XdrIO::read_serialized_nodes(), libMesh::XdrIO::read_serialized_nodesets(), libMesh::XdrIO::read_serialized_subdomain_names(), libMesh::System::read_serialized_vector(), libMesh::Nemesis_IO_Helper::read_var_names_impl(), MeshFunctionTest::read_variable_info_from_output_data(), libMesh::MeshBase::recalculate_n_partitions(), libMesh::SimplexRefiner::refine_via_edges(), libMesh::StaticCondensationDofMap::reinit(), libMesh::BoundaryInfo::remove_edge_id(), libMesh::BoundaryInfo::remove_node_id(), libMesh::BoundaryInfo::remove_shellface_id(), libMesh::BoundaryInfo::remove_side_id(), libMesh::DistributedMesh::renumber_dof_objects(), libMesh::DistributedMesh::renumber_nodes_and_elements(), LinearElasticityWithContact::residual_and_jacobian(), OverlappingAlgebraicGhostingTest::run_ghosting_test(), OverlappingCouplingGhostingTest::run_sparsity_pattern_test(), scale_mesh_and_plot(), libMesh::DofMap::scatter_constraints(), libMesh::CheckpointIO::select_split_config(), libMesh::GenericProjector< FFunctor, GFunctor, FValue, ProjectionAction >::send_and_insert_dof_values(), libMesh::TransientRBConstruction::set_error_temporal_data(), libMesh::Partitioner::set_interface_node_processor_ids_BFS(), libMesh::Partitioner::set_interface_node_processor_ids_linear(), libMesh::Partitioner::set_interface_node_processor_ids_petscpartitioner(), libMesh::Partitioner::set_node_processor_ids(), libMesh::DofMap::set_nonlocal_dof_objects(), libMesh::Partitioner::set_parent_processor_ids(), libMesh::PetscDMWrapper::set_point_range_in_section(), libMesh::PetscDiffSolver::setup_petsc_data(), libMesh::RBEIMEvaluation::side_distribute_bfs(), libMesh::RBEIMEvaluation::side_gather_bfs(), libMesh::RBEIMConstruction::side_inner_product(), libMesh::Partitioner::single_partition(), libMesh::LaplaceMeshSmoother::smooth(), libMesh::VariationalMeshSmoother::smooth(), libMesh::NoxNonlinearSolver< Number >::solve(), libMesh::ClawSystem::solve_conservation_law(), libMesh::split_mesh(), libMesh::RBEIMConstruction::store_eim_solutions_for_training_set(), libMesh::MeshBase::subdomain_ids(), libMesh::BoundaryInfo::sync(), libMesh::MeshBase::sync_subdomain_name_map(), ConstraintOperatorTest::test1DCoarseningNewNodes(), ConstraintOperatorTest::test1DCoarseningOperator(), MeshFunctionTest::test_bad_gradient_var_with_out_of_mesh_value(), MeshFunctionTest::test_bad_hessian_var_with_out_of_mesh_value(), MeshfunctionDFEM::test_mesh_function_dfem(), MeshfunctionDFEM::test_mesh_function_dfem_grad(), MeshFunctionTest::test_p_level(), ExodusC0PolyhedronTest::test_write_and_read_hexagonal_prism(), ExodusC0PolygonTest::test_write_and_read_pentagon(), DofMapTest::testBadElemFECombo(), SystemsTest::testBlockRestrictedVarNDofs(), BoundaryInfoTest::testBoundaryOnChildrenErrors(), CheckpointIOTest::testC0PolygonCheckpoint(), VolumeTest::testC0PolygonMethods(), CheckpointIOTest::testC0PolyhedronCheckpoint(), VolumeTest::testC0PolyhedronMethods(), ConstraintOperatorTest::testCoreform(), ConnectedComponentsTest::testEdge(), MeshInputTest::testExodusIGASidesets(), MeshTriangulationTest::testFoundCenters(), PointLocatorTest::testLocator(), BoundaryInfoTest::testMesh(), BoundaryMeshSubdomainTest::testPerBoundarySubdomain(), PointLocatorTest::testPlanar(), MeshTriangulationTest::testPoly2TriEdge3ToTri7CenterFixup(), MeshTriangulationTest::testPoly2TriRefinementBase(), SystemsTest::testProjectCubeWithMeshFunction(), SystemsTest::testProjectScalarCoarsening(), BoundaryInfoTest::testRenumber(), BoundaryInfoTest::testSelectiveRenumber(), BoundaryMeshSubdomainTest::testSingleSubdomain(), CheckpointIOTest::testSplitter(), MeshInputTest::testTetgenIO(), MeshTriangulationTest::testTriangulatorInterp(), MeshTriangulationTest::testTriangulatorMeshedHoles(), MeshTriangulationTest::testTriangulatorRoundHole(), MeshSmootherTest::testVariationalSmoother(), libMesh::MeshTools::total_weight(), libMesh::RBConstruction::train_reduced_basis_with_POD(), libMesh::MeshfreeSolutionTransfer::transfer(), libMesh::MeshFunctionSolutionTransfer::transfer(), libMesh::Poly2TriTriangulator::triangulate(), libMesh::RBConstruction::truth_assembly(), libMesh::TransientRBConstruction::truth_assembly(), update_current_local_solution(), libMesh::TransientRBConstruction::update_RB_initial_condition_all_N(), libMesh::RBConstruction::update_RB_system_matrices(), libMesh::TransientRBConstruction::update_RB_system_matrices(), libMesh::TransientRBConstruction::update_residual_terms(), libMesh::RBConstruction::update_residual_terms(), libMesh::MeshTools::volume(), libMesh::STLIO::write(), libMesh::XdrIO::write(), libMesh::NameBasedIO::write(), libMesh::VTKIO::write_nodal_data(), libMesh::RBEIMEvaluation::write_out_interior_basis_functions(), libMesh::RBEIMEvaluation::write_out_node_basis_functions(), libMesh::RBEIMEvaluation::write_out_side_basis_functions(), libMesh::RBEvaluation::write_out_vectors(), libMesh::RBConstruction::write_riesz_representors_to_files(), libMesh::TransientRBConstruction::write_riesz_representors_to_files(), libMesh::System::write_SCALAR_dofs(), libMesh::XdrIO::write_serialized_bcs_helper(), libMesh::System::write_serialized_blocked_dof_objects(), libMesh::XdrIO::write_serialized_connectivity(), libMesh::XdrIO::write_serialized_nodes(), libMesh::XdrIO::write_serialized_nodesets(), libMesh::RBDataSerialization::RBEvaluationSerialization::write_to_file(), libMesh::RBDataSerialization::TransientRBEvaluationSerialization::write_to_file(), libMesh::RBDataSerialization::RBEIMEvaluationSerialization::write_to_file(), and libMesh::RBDataSerialization::RBSCMEvaluationSerialization::write_to_file().

n_processors()

processor_id_type libMesh::ParallelObject::n_processors ( ) const

inlineinherited

Returns

The number of processors in the group.

Definition at line 103 of file parallel_object.h.

  {
    processor_id_type returnval =
      cast_int<processor_id_type>(_communicator.size());
    libmesh_assert(returnval); // We never have an empty comm
    return returnval;
  }

References libMesh::ParallelObject::_communicator, libMesh::libmesh_assert(), and libMesh::Parallel::Communicator::size().

Referenced by libMesh::Partitioner::_find_global_index_by_pid_map(), libMesh::BoundaryInfo::_find_id_maps(), libMesh::DofMap::add_constraints_to_send_list(), libMesh::PetscDMWrapper::add_dofs_to_section(), libMesh::DistributedMesh::add_elem(), libMesh::DistributedMesh::add_node(), libMesh::System::add_vector(), libMesh::LaplaceMeshSmoother::allgather_graph(), libMesh::DofMap::allgather_recursive_constraints(), libMesh::FEMSystem::assembly(), libMesh::Nemesis_IO::assert_symmetric_cmaps(), libMesh::Partitioner::assign_partitioning(), libMesh::AztecLinearSolver< T >::AztecLinearSolver(), libMesh::Partitioner::build_graph(), libMesh::EquationSystems::build_parallel_elemental_solution_vector(), libMesh::DistributedMesh::clear(), libMesh::DistributedMesh::clear_elems(), libMesh::Nemesis_IO_Helper::compute_border_node_ids(), libMesh::Nemesis_IO_Helper::construct_nemesis_filename(), libMesh::UnstructuredMesh::copy_nodes_and_elements(), libMesh::ExodusII_IO::copy_scalar_solution(), libMesh::Nemesis_IO::copy_scalar_solution(), libMesh::UnstructuredMesh::create_pid_mesh(), libMesh::MeshTools::create_processor_bounding_box(), libMesh::DistributedMesh::DistributedMesh(), libMesh::EnsightIO::EnsightIO(), libMesh::RBEIMEvaluation::gather_bfs(), libMesh::MeshBase::get_info(), libMesh::StaticCondensation::init(), libMesh::SystemSubsetBySubdomain::init(), libMesh::PetscDMWrapper::init_petscdm(), libMesh::ExodusII_IO_Helper::initialize(), libMesh::Nemesis_IO_Helper::initialize(), libMesh::DistributedMesh::insert_elem(), libMesh::NumericVector< T >::is_effectively_ghosted(), libMesh::NumericVector< T >::is_effectively_serial(), libMesh::MeshTools::libmesh_assert_contiguous_dof_ids(), libMesh::MeshTools::libmesh_assert_parallel_consistent_new_node_procids(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Elem >(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Node >(), libMesh::MeshTools::libmesh_assert_topology_consistent_procids< Node >(), libMesh::MeshTools::libmesh_assert_valid_boundary_ids(), libMesh::MeshTools::libmesh_assert_valid_dof_ids(), libMesh::MeshTools::libmesh_assert_valid_neighbors(), libMesh::MeshTools::libmesh_assert_valid_refinement_flags(), libMesh::MeshBase::n_active_elem_on_proc(), libMesh::DofMap::n_dofs_per_processor(), libMesh::MeshBase::n_elem_on_proc(), libMesh::MeshBase::n_nodes_on_proc(), libMesh::RBEIMEvaluation::node_gather_bfs(), libMesh::MeshBase::partition(), libMesh::Partitioner::partition(), libMesh::Partitioner::partition_unpartitioned_elements(), libMesh::Partitioner::partition_unpartitioned_elements(), libMesh::MeshBase::print_constraint_rows(), libMesh::DofMap::print_dof_constraints(), libMesh::Nemesis_IO::read(), libMesh::CheckpointIO::read(), libMesh::NameBasedIO::read(), libMesh::CheckpointIO::read_connectivity(), libMesh::XdrIO::read_header(), libMesh::CheckpointIO::read_nodes(), libMesh::System::read_parallel_data(), libMesh::System::read_SCALAR_dofs(), libMesh::System::read_serialized_blocked_dof_objects(), libMesh::System::read_serialized_vector(), libMesh::DistributedMesh::renumber_dof_objects(), libMesh::Partitioner::repartition(), OverlappingFunctorTest::run_partitioner_test(), libMesh::DofMap::scatter_constraints(), libMesh::DistributedMesh::set_next_unique_id(), libMesh::DofMap::set_nonlocal_dof_objects(), libMesh::PetscDMWrapper::set_point_range_in_section(), WriteVecAndScalar::setupTests(), libMesh::RBEIMEvaluation::side_gather_bfs(), DistributedMeshTest::testRemoteElemError(), CheckpointIOTest::testSplitter(), libMesh::DistributedMesh::update_parallel_id_counts(), libMesh::GMVIO::write_binary(), libMesh::GMVIO::write_discontinuous_gmv(), libMesh::ExodusII_IO_Helper::write_nodal_coordinates(), libMesh::ExodusII_IO::write_nodal_data(), libMesh::VTKIO::write_nodal_data(), libMesh::System::write_parallel_data(), libMesh::System::write_SCALAR_dofs(), libMesh::XdrIO::write_serialized_bcs_helper(), libMesh::System::write_serialized_blocked_dof_objects(), libMesh::XdrIO::write_serialized_connectivity(), libMesh::XdrIO::write_serialized_nodes(), and libMesh::XdrIO::write_serialized_nodesets().

processor_id()

processor_id_type libMesh::ParallelObject::processor_id ( ) const

inlineinherited

Returns

The rank of this processor in the group.

Definition at line 114 of file parallel_object.h.

  { return cast_int<processor_id_type>(_communicator.rank()); }

References libMesh::ParallelObject::_communicator, and libMesh::Parallel::Communicator::rank().

Referenced by libMesh::BoundaryInfo::_find_id_maps(), libMesh::PetscDMWrapper::add_dofs_to_section(), libMesh::DistributedMesh::add_elem(), libMesh::BoundaryInfo::add_elements(), libMesh::DistributedMesh::add_node(), libMesh::MeshTools::Modification::all_tri(), libMesh::FEMSystem::assembly(), libMesh::Nemesis_IO::assert_symmetric_cmaps(), libMesh::Partitioner::assign_partitioning(), libMesh::Nemesis_IO_Helper::build_element_and_node_maps(), libMesh::Partitioner::build_graph(), libMesh::InfElemBuilder::build_inf_elem(), libMesh::BoundaryInfo::build_node_list_from_side_list(), libMesh::EquationSystems::build_parallel_elemental_solution_vector(), libMesh::EquationSystems::build_parallel_solution_vector(), libMesh::MeshFunction::check_found_elem(), libMesh::DistributedMesh::clear(), libMesh::DistributedMesh::clear_elems(), libMesh::ExodusII_IO_Helper::close(), libMesh::Nemesis_IO_Helper::compute_border_node_ids(), libMesh::Nemesis_IO_Helper::compute_communication_map_parameters(), libMesh::Nemesis_IO_Helper::compute_internal_and_border_elems_and_internal_nodes(), libMesh::RBConstruction::compute_max_error_bound(), libMesh::Nemesis_IO_Helper::compute_node_communication_maps(), libMesh::Nemesis_IO_Helper::compute_num_global_elem_blocks(), libMesh::Nemesis_IO_Helper::compute_num_global_nodesets(), libMesh::Nemesis_IO_Helper::compute_num_global_sidesets(), libMesh::Nemesis_IO_Helper::construct_nemesis_filename(), libMesh::ExodusII_IO::copy_elemental_solution(), libMesh::ExodusII_IO::copy_nodal_solution(), libMesh::ExodusII_IO::copy_scalar_solution(), libMesh::Nemesis_IO::copy_scalar_solution(), libMesh::MeshTools::correct_node_proc_ids(), libMesh::ExodusII_IO_Helper::create(), libMesh::MeshCommunication::delete_remote_elements(), libMesh::DistributedMesh::DistributedMesh(), libMesh::DistributedMesh::DistributedMesh(), libMesh::DofMapBase::end_dof(), libMesh::DofMapBase::end_old_dof(), libMesh::EnsightIO::EnsightIO(), libMesh::GenericProjector< FFunctor, GFunctor, FValue, ProjectionAction >::SubFunctor::find_dofs_to_send(), libMesh::UnstructuredMesh::find_neighbors(), libMesh::DofMapBase::first_dof(), libMesh::DofMapBase::first_old_dof(), libMesh::RBEIMEvaluation::gather_bfs(), libMesh::Nemesis_IO_Helper::get_cmap_params(), libMesh::Nemesis_IO_Helper::get_eb_info_global(), libMesh::Nemesis_IO_Helper::get_elem_cmap(), libMesh::Nemesis_IO_Helper::get_elem_map(), libMesh::MeshBase::get_info(), libMesh::Nemesis_IO_Helper::get_init_global(), libMesh::Nemesis_IO_Helper::get_init_info(), libMesh::RBEIMEvaluation::get_interior_basis_functions_as_vecs(), libMesh::Nemesis_IO_Helper::get_loadbal_param(), libMesh::DofMap::get_local_constraints(), libMesh::MeshBase::get_local_constraints(), libMesh::Nemesis_IO_Helper::get_node_cmap(), libMesh::Nemesis_IO_Helper::get_node_map(), libMesh::Nemesis_IO_Helper::get_ns_param_global(), libMesh::Nemesis_IO_Helper::get_ss_param_global(), libMesh::SparsityPattern::Build::handle_vi_vj(), libMesh::LaplaceMeshSmoother::init(), libMesh::SystemSubsetBySubdomain::init(), HeatSystem::init_data(), libMesh::ExodusII_IO_Helper::initialize(), libMesh::ExodusII_IO_Helper::initialize_element_variables(), libMesh::ExodusII_IO_Helper::initialize_global_variables(), libMesh::ExodusII_IO_Helper::initialize_nodal_variables(), libMesh::DistributedMesh::insert_elem(), libMesh::MeshTools::Modification::interpolate_surface(), libMesh::SparsityPattern::Build::join(), libMesh::RBEvaluation::legacy_write_offline_data_to_files(), libMesh::RBSCMEvaluation::legacy_write_offline_data_to_files(), libMesh::TransientRBEvaluation::legacy_write_offline_data_to_files(), libMesh::MeshTools::libmesh_assert_consistent_distributed(), libMesh::MeshTools::libmesh_assert_consistent_distributed_nodes(), libMesh::MeshTools::libmesh_assert_contiguous_dof_ids(), libMesh::MeshTools::libmesh_assert_parallel_consistent_procids< Elem >(), libMesh::MeshTools::libmesh_assert_valid_neighbors(), libMesh::DistributedMesh::libmesh_assert_valid_parallel_object_ids(), main(), AugmentSparsityOnInterface::mesh_reinit(), libMesh::TriangulatorInterface::MeshedHole::MeshedHole(), libMesh::MeshBase::n_active_local_elem(), libMesh::BoundaryInfo::n_boundary_conds(), libMesh::MeshTools::n_connected_components(), libMesh::MeshBase::n_constraint_rows(), libMesh::BoundaryInfo::n_edge_conds(), libMesh::DofMapBase::n_local_dofs(), libMesh::MeshBase::n_local_elem(), libMesh::MeshBase::n_local_nodes(), libMesh::BoundaryInfo::n_nodeset_conds(), libMesh::BoundaryInfo::n_shellface_conds(), libMesh::RBEIMEvaluation::node_gather_bfs(), libMesh::DistributedMesh::own_node(), libMesh::BoundaryInfo::parallel_sync_node_ids(), libMesh::BoundaryInfo::parallel_sync_side_ids(), libMesh::MeshBase::print_constraint_rows(), libMesh::DofMap::print_dof_constraints(), libMesh::DofMap::process_mesh_constraint_rows(), libMesh::Nemesis_IO_Helper::put_cmap_params(), libMesh::Nemesis_IO_Helper::put_elem_cmap(), libMesh::Nemesis_IO_Helper::put_elem_map(), libMesh::Nemesis_IO_Helper::put_loadbal_param(), libMesh::Nemesis_IO_Helper::put_node_cmap(), libMesh::Nemesis_IO_Helper::put_node_map(), libMesh::XdrIO::read(), libMesh::Nemesis_IO::read(), libMesh::CheckpointIO::read(), libMesh::NameBasedIO::read(), libMesh::EquationSystems::read(), libMesh::EquationSystems::read(), libMesh::ExodusII_IO_Helper::read_elem_num_map(), libMesh::ExodusII_IO_Helper::read_global_values(), libMesh::CheckpointIO::read_header(), libMesh::ExodusII_IO::read_header(), libMesh::System::read_header(), libMesh::XdrIO::read_header(), libMesh::DynaIO::read_mesh(), libMesh::ExodusII_IO_Helper::read_node_num_map(), libMesh::System::read_parallel_data(), libMesh::RBConstruction::read_riesz_representors_from_files(), libMesh::TransientRBConstruction::read_riesz_representors_from_files(), libMesh::System::read_SCALAR_dofs(), libMesh::XdrIO::read_serialized_bc_names(), libMesh::XdrIO::read_serialized_bcs_helper(), libMesh::System::read_serialized_blocked_dof_objects(), libMesh::XdrIO::read_serialized_connectivity(), libMesh::System::read_serialized_data(), libMesh::XdrIO::read_serialized_nodes(), libMesh::XdrIO::read_serialized_nodesets(), libMesh::XdrIO::read_serialized_subdomain_names(), libMesh::System::read_serialized_vector(), libMesh::System::read_serialized_vectors(), libMesh::Nemesis_IO_Helper::read_var_names_impl(), libMesh::SimplexRefiner::refine_via_edges(), libMesh::SimplexRefiner::refine_via_edges(), libMesh::StaticCondensationDofMap::reinit(), libMesh::DistributedMesh::renumber_dof_objects(), libMesh::DistributedMesh::renumber_nodes_and_elements(), libMesh::DofMap::scatter_constraints(), libMesh::CheckpointIO::select_split_config(), libMesh::DistributedMesh::set_next_unique_id(), libMesh::DofMap::set_nonlocal_dof_objects(), libMesh::PetscDMWrapper::set_point_range_in_section(), libMesh::RBEIMEvaluation::side_gather_bfs(), MeshFunctionTest::test_bad_gradient_var_with_out_of_mesh_value(), MeshFunctionTest::test_bad_hessian_var_with_out_of_mesh_value(), ExodusTest< elem_type >::test_read_gold(), ExodusTest< elem_type >::test_write(), ExodusC0PolyhedronTest::test_write_and_read_hexagonal_prism(), ExodusC0PolygonTest::test_write_and_read_pentagon(), MeshInputTest::testAbaqusRead(), MeshInputTest::testBadGmsh(), BoundaryInfoTest::testBoundaryIDs(), MeshInputTest::testCopyElementSolutionImpl(), MeshInputTest::testCopyElementVectorImpl(), MeshInputTest::testCopyNodalSolutionImpl(), DefaultCouplingTest::testCoupling(), PointNeighborCouplingTest::testCoupling(), MeshInputTest::testDynaFileMappings(), MeshInputTest::testDynaNoSplines(), MeshInputTest::testDynaReadElem(), MeshInputTest::testDynaReadPatch(), MeshInputTest::testExodusFileMappings(), MeshInputTest::testExodusIGASidesets(), MeshInputTest::testExodusWriteElementDataFromDiscontinuousNodalData(), MeshInputTest::testGmshBCIDOverlap(), MeshInputTest::testGoodGmsh(), MeshInputTest::testGoodSTL(), MeshInputTest::testGoodSTLBinary(), BoundaryInfoTest::testInternalBoundary(), MeshInputTest::testLowOrderEdgeBlocks(), BoundaryMeshSubdomainTest::testPerBoundarySubdomain(), SystemsTest::testProjectMatrix3D(), BoundaryInfoTest::testShellFaceConstraints(), MeshInputTest::testSingleElementImpl(), BoundaryMeshSubdomainTest::testSingleSubdomain(), WriteVecAndScalar::testSolution(), CheckpointIOTest::testSplitter(), MeshInputTest::testTetgenIO(), MeshSmootherTest::testVariationalSmoother(), libMesh::MeshTools::total_weight(), libMesh::NetGenMeshInterface::triangulate(), libMesh::Parallel::Packing< Elem * >::unpack(), libMesh::Parallel::Packing< Node * >::unpack(), libMesh::DistributedMesh::update_parallel_id_counts(), libMesh::DTKAdapter::update_variable_values(), libMesh::MeshTools::volume(), libMesh::STLIO::write(), libMesh::XdrIO::write(), libMesh::NameBasedIO::write(), libMesh::CheckpointIO::write(), libMesh::EquationSystems::write(), libMesh::EquationSystems::write(), libMesh::GMVIO::write_discontinuous_gmv(), libMesh::ExodusII_IO::write_element_data(), libMesh::ExodusII_IO::write_element_data_from_discontinuous_nodal_data(), libMesh::ExodusII_IO_Helper::write_element_values(), libMesh::ExodusII_IO_Helper::write_element_values_element_major(), libMesh::ExodusII_IO_Helper::write_elements(), libMesh::ExodusII_IO_Helper::write_elemset_data(), libMesh::ExodusII_IO_Helper::write_elemsets(), libMesh::ExodusII_IO::write_global_data(), libMesh::ExodusII_IO_Helper::write_global_values(), libMesh::System::write_header(), libMesh::ExodusII_IO::write_information_records(), libMesh::ExodusII_IO_Helper::write_information_records(), libMesh::ExodusII_IO_Helper::write_nodal_coordinates(), libMesh::ExodusII_IO::write_nodal_data(), libMesh::VTKIO::write_nodal_data(), libMesh::UCDIO::write_nodal_data(), libMesh::ExodusII_IO::write_nodal_data_common(), libMesh::ExodusII_IO::write_nodal_data_discontinuous(), libMesh::ExodusII_IO_Helper::write_nodal_values(), libMesh::ExodusII_IO_Helper::write_nodeset_data(), libMesh::ExodusII_IO_Helper::write_nodesets(), libMesh::Nemesis_IO_Helper::write_nodesets(), libMesh::RBEIMEvaluation::write_out_interior_basis_functions(), libMesh::RBEIMEvaluation::write_out_node_basis_functions(), libMesh::RBEIMEvaluation::write_out_side_basis_functions(), write_output_solvedata(), libMesh::System::write_parallel_data(), libMesh::RBConstruction::write_riesz_representors_to_files(), libMesh::System::write_SCALAR_dofs(), libMesh::XdrIO::write_serialized_bc_names(), libMesh::XdrIO::write_serialized_bcs_helper(), libMesh::System::write_serialized_blocked_dof_objects(), libMesh::XdrIO::write_serialized_connectivity(), libMesh::System::write_serialized_data(), libMesh::XdrIO::write_serialized_nodes(), libMesh::XdrIO::write_serialized_nodesets(), libMesh::XdrIO::write_serialized_subdomain_names(), libMesh::System::write_serialized_vector(), libMesh::System::write_serialized_vectors(), libMesh::ExodusII_IO_Helper::write_sideset_data(), libMesh::ExodusII_IO_Helper::write_sidesets(), libMesh::Nemesis_IO_Helper::write_sidesets(), libMesh::ExodusII_IO::write_timestep(), libMesh::ExodusII_IO_Helper::write_timestep(), and libMesh::ExodusII_IO::write_timestep_discontinuous().

read() [1/7]

void FEMParameters::read	(	GetPot &	input,
		const std::vector< std::string > *	other_variable_names = nullptr
	)

Definition at line 156 of file femparameters.C.

{
  std::vector<std::string> variable_assignments;
  std::unordered_set<std::string> variable_names;
  if (other_variable_names)
    for (std::size_t i=0; i != other_variable_names->size(); ++i)
      {
        const std::string & name = (*other_variable_names)[i];
        const std::string stringval = input(name, std::string());
        variable_assignments.push_back(name + "=" + stringval);
      }
 
  GETPOT_INT_INPUT(initial_timestep);
  GETPOT_INT_INPUT(n_timesteps);
  GETPOT_INPUT(transient);
  GETPOT_INT_INPUT(deltat_reductions);
  GETPOT_INPUT(timesolver_core);
  GETPOT_INPUT(solution_history_type);
  GETPOT_INPUT(end_time);
  GETPOT_INPUT(deltat);
  GETPOT_INPUT(timesolver_theta);
  GETPOT_INPUT(timesolver_maxgrowth);
  GETPOT_INPUT(timesolver_tolerance);
  GETPOT_INPUT(timesolver_upper_tolerance);
  GETPOT_INPUT(steadystate_tolerance);
 
  GETPOT_REGISTER(timesolver_norm);
  const unsigned int n_timesolver_norm = input.vector_variable_size("timesolver_norm");
  timesolver_norm.resize(n_timesolver_norm, L2);
  for (unsigned int i=0; i != n_timesolver_norm; ++i)
    {
      int current_norm = 0; // L2
      if (timesolver_norm[i] == H1)
        current_norm = 1;
      if (timesolver_norm[i] == H2)
        current_norm = 2;
      current_norm = input("timesolver_norm", current_norm, i);
      if (current_norm == 0)
        timesolver_norm[i] = L2;
      else if (current_norm == 1)
        timesolver_norm[i] = H1;
      else if (current_norm == 2)
        timesolver_norm[i] = H2;
      else
        timesolver_norm[i] = DISCRETE_L2;
    }
 
 
  GETPOT_INT_INPUT(dimension);
  GETPOT_INPUT(domaintype);
  GETPOT_INPUT(domainfile);
  GETPOT_INPUT(elementtype);
  GETPOT_INPUT(elementorder);
  GETPOT_INPUT(domain_xmin);
  GETPOT_INPUT(domain_ymin);
  GETPOT_INPUT(domain_zmin);
  GETPOT_INPUT(domain_edge_width);
  GETPOT_INPUT(domain_edge_length);
  GETPOT_INPUT(domain_edge_height);
  GETPOT_INT_INPUT(coarsegridx);
  GETPOT_INT_INPUT(coarsegridy);
  GETPOT_INT_INPUT(coarsegridz);
  GETPOT_INT_INPUT(coarserefinements);
  GETPOT_INT_INPUT(extrarefinements);
  GETPOT_INPUT(mesh_redistribute_func);
 
 
  GETPOT_INPUT(mesh_partitioner_type);
 
 
  GETPOT_INT_INPUT(nelem_target);
  GETPOT_INPUT(global_tolerance);
  GETPOT_INPUT(refine_fraction);
  GETPOT_INPUT(coarsen_fraction);
  GETPOT_INPUT(coarsen_threshold);
  GETPOT_INT_INPUT(max_adaptivesteps);
  GETPOT_INT_INPUT(initial_adaptivesteps);
 
 
  GETPOT_INT_INPUT(write_interval);
  GETPOT_INPUT(output_xda);
  GETPOT_INPUT(output_xdr);
  GETPOT_INPUT(output_gz);
#ifndef LIBMESH_HAVE_GZSTREAM
  output_gz                   = false;
#endif
  GETPOT_INPUT(output_bz2);
#ifndef LIBMESH_HAVE_BZ2
  output_bz2                  = false;
#endif
  GETPOT_INPUT(output_gmv);
  GETPOT_INPUT(write_gmv_error);
#ifndef LIBMESH_HAVE_GMV
  output_gmv                  = false;
  write_gmv_error             = false;
#endif
  GETPOT_INPUT(output_tecplot);
  GETPOT_INPUT(write_tecplot_error);
#ifndef LIBMESH_HAVE_TECPLOT_API
  output_tecplot              = false;
  write_tecplot_error         = false;
#endif
  GETPOT_INPUT(output_exodus);
  GETPOT_INPUT(write_exodus_error);
#ifndef LIBMESH_HAVE_EXODUS_API
  output_exodus                  = false;
  write_exodus_error             = false;
#endif
  GETPOT_INPUT(output_nemesis);
#ifndef LIBMESH_HAVE_NEMESIS_API
  output_nemesis                  = false;
#endif
 
 
  GETPOT_REGISTER(system_types);
  const unsigned int n_system_types =
    input.vector_variable_size("system_types");
  if (n_system_types)
    {
      system_types.resize(n_system_types, "");
      for (unsigned int i=0; i != n_system_types; ++i)
        {
          system_types[i] = input("system_types", system_types[i], i);
        }
    }
 
 
#ifdef LIBMESH_ENABLE_PERIODIC
  GETPOT_REGISTER(periodic_boundaries);
  const unsigned int n_periodic_bcs =
    input.vector_variable_size("periodic_boundaries");
 
  if (n_periodic_bcs)
    {
      if (domaintype != "square" &&
          domaintype != "cylinder" &&
          domaintype != "file" &&
          domaintype != "od2")
        {
          libMesh::out << "Periodic boundaries need rectilinear domains" << std::endl;;
          libmesh_error();
        }
      for (unsigned int i=0; i != n_periodic_bcs; ++i)
        {
          const unsigned int myboundary =
            input("periodic_boundaries", -1, i);
          boundary_id_type pairedboundary = 0;
          RealVectorValue translation_vector;
          if (dimension == 2)
            switch (myboundary)
              {
              case 0:
                pairedboundary = 2;
                translation_vector = RealVectorValue(0., domain_edge_length);
                break;
              case 1:
                pairedboundary = 3;
                translation_vector = RealVectorValue(-domain_edge_width, 0);
                break;
              default:
                libMesh::out << "Unrecognized periodic boundary id " <<
                  myboundary << std::endl;;
                libmesh_error();
              }
          else if (dimension == 3)
            switch (myboundary)
              {
              case 0:
                pairedboundary = 5;
                translation_vector = RealVectorValue(Real(0), Real(0), domain_edge_height);
                break;
              case 1:
                pairedboundary = 3;
                translation_vector = RealVectorValue(Real(0), domain_edge_length, Real(0));
                break;
              case 2:
                pairedboundary = 4;
                translation_vector = RealVectorValue(-domain_edge_width, Real(0), Real(0));
                break;
              default:
                libMesh::out << "Unrecognized periodic boundary id " <<
                  myboundary << std::endl;;
                libmesh_error();
              }
          periodic_boundaries.push_back(PeriodicBoundary(translation_vector));
          periodic_boundaries[i].myboundary = cast_int<boundary_id_type>(myboundary);
          periodic_boundaries[i].pairedboundary = pairedboundary;
        }
    }
#endif // LIBMESH_ENABLE_PERIODIC
 
  // Use std::string inputs so GetPot doesn't have to make a bunch
  // of internal C string copies
  std::string zero_string = "zero";
  std::string empty_string = "";
 
  GETPOT_REGISTER(dirichlet_condition_types);
  GETPOT_REGISTER(dirichlet_condition_values);
  GETPOT_REGISTER(dirichlet_condition_boundaries);
  GETPOT_REGISTER(dirichlet_condition_variables);
 
  const unsigned int n_dirichlet_conditions=
    input.vector_variable_size("dirichlet_condition_types");
 
  if (n_dirichlet_conditions !=
      input.vector_variable_size("dirichlet_condition_values"))
    {
      libMesh::out << "Error: " << n_dirichlet_conditions
                   << " Dirichlet condition types does not match "
                   << input.vector_variable_size("dirichlet_condition_values")
                   << " Dirichlet condition values." << std::endl;
 
      libmesh_error();
    }
 
  if (n_dirichlet_conditions !=
      input.vector_variable_size("dirichlet_condition_boundaries"))
    {
      libMesh::out << "Error: " << n_dirichlet_conditions
                   << " Dirichlet condition types does not match "
                   << input.vector_variable_size("dirichlet_condition_boundaries")
                   << " Dirichlet condition boundaries." << std::endl;
 
      libmesh_error();
    }
 
  if (n_dirichlet_conditions !=
      input.vector_variable_size("dirichlet_condition_variables"))
    {
      libMesh::out << "Error: " << n_dirichlet_conditions
                   << " Dirichlet condition types does not match "
                   << input.vector_variable_size("dirichlet_condition_variables")
                   << " Dirichlet condition variables sets." << std::endl;
 
      libmesh_error();
    }
 
  for (unsigned int dc=0; dc != n_dirichlet_conditions; ++dc)
    {
      const std::string func_type =
        input("dirichlet_condition_types", zero_string, dc);
 
      const std::string func_value =
        input("dirichlet_condition_values", empty_string, dc);
 
      const boundary_id_type func_boundary =
        input("dirichlet_condition_boundaries", boundary_id_type(0), dc);
 
      dirichlet_conditions[func_boundary] =
        (new_function_base(func_type, func_value).release());
 
      const std::string variable_set =
        input("dirichlet_condition_variables", empty_string, dc);
 
      for (unsigned int i=0; i != variable_set.size(); ++i)
        {
          if (variable_set[i] == '1')
            dirichlet_condition_variables[func_boundary].push_back(i);
          else if (variable_set[i] != '0')
            {
              libMesh::out << "Unable to understand Dirichlet variable set"
                           << variable_set << std::endl;
              libmesh_error();
            }
        }
    }
 
  GETPOT_REGISTER(neumann_condition_types);
  GETPOT_REGISTER(neumann_condition_values);
  GETPOT_REGISTER(neumann_condition_boundaries);
  GETPOT_REGISTER(neumann_condition_variables);
 
  const unsigned int n_neumann_conditions=
    input.vector_variable_size("neumann_condition_types");
 
  if (n_neumann_conditions !=
      input.vector_variable_size("neumann_condition_values"))
    {
      libMesh::out << "Error: " << n_neumann_conditions
                   << " Neumann condition types does not match "
                   << input.vector_variable_size("neumann_condition_values")
                   << " Neumann condition values." << std::endl;
 
      libmesh_error();
    }
 
  if (n_neumann_conditions !=
      input.vector_variable_size("neumann_condition_boundaries"))
    {
      libMesh::out << "Error: " << n_neumann_conditions
                   << " Neumann condition types does not match "
                   << input.vector_variable_size("neumann_condition_boundaries")
                   << " Neumann condition boundaries." << std::endl;
 
      libmesh_error();
    }
 
  if (n_neumann_conditions !=
      input.vector_variable_size("neumann_condition_variables"))
    {
      libMesh::out << "Error: " << n_neumann_conditions
                   << " Neumann condition types does not match "
                   << input.vector_variable_size("neumann_condition_variables")
                   << " Neumann condition variables sets." << std::endl;
 
      libmesh_error();
    }
 
  for (unsigned int nc=0; nc != n_neumann_conditions; ++nc)
    {
      const std::string func_type =
        input("neumann_condition_types", zero_string, nc);
 
      const std::string func_value =
        input("neumann_condition_values", empty_string, nc);
 
      const boundary_id_type func_boundary =
        input("neumann_condition_boundaries", boundary_id_type(0), nc);
 
      neumann_conditions[func_boundary] =
        (new_function_base(func_type, func_value).release());
 
      const std::string variable_set =
        input("neumann_condition_variables", empty_string, nc);
 
      for (unsigned int i=0; i != variable_set.size(); ++i)
        {
          if (variable_set[i] == '1')
            neumann_condition_variables[func_boundary].push_back(i);
          else if (variable_set[i] != '0')
            {
              libMesh::out << "Unable to understand Neumann variable set"
                           << variable_set << std::endl;
              libmesh_error();
            }
        }
    }
 
  GETPOT_REGISTER(initial_condition_types);
  GETPOT_REGISTER(initial_condition_values);
  GETPOT_REGISTER(initial_condition_subdomains);
 
  const unsigned int n_initial_conditions=
    input.vector_variable_size("initial_condition_types");
 
  if (n_initial_conditions !=
      input.vector_variable_size("initial_condition_values"))
    {
      libMesh::out << "Error: " << n_initial_conditions
                   << " initial condition types does not match "
                   << input.vector_variable_size("initial_condition_values")
                   << " initial condition values." << std::endl;
 
      libmesh_error();
    }
 
  if (n_initial_conditions !=
      input.vector_variable_size("initial_condition_subdomains"))
    {
      libMesh::out << "Error: " << n_initial_conditions
                   << " initial condition types does not match "
                   << input.vector_variable_size("initial_condition_subdomains")
                   << " initial condition subdomains." << std::endl;
 
      libmesh_error();
    }
 
  for (unsigned int i=0; i != n_initial_conditions; ++i)
    {
      const std::string func_type =
        input("initial_condition_types", zero_string, i);
 
      const std::string func_value =
        input("initial_condition_values", empty_string, i);
 
      const subdomain_id_type func_subdomain =
        input("initial_condition_subdomains", subdomain_id_type(0), i);
 
      initial_conditions[func_subdomain] =
        (new_function_base(func_type, func_value).release());
    }
 
  GETPOT_REGISTER(other_interior_function_types);
  GETPOT_REGISTER(other_interior_function_values);
  GETPOT_REGISTER(other_interior_function_subdomains);
  GETPOT_REGISTER(other_interior_function_ids);
 
  const unsigned int n_other_interior_functions =
    input.vector_variable_size("other_interior_function_types");
 
  if (n_other_interior_functions !=
      input.vector_variable_size("other_interior_function_values"))
    {
      libMesh::out << "Error: " << n_other_interior_functions
                   << " other interior function types does not match "
                   << input.vector_variable_size("other_interior_function_values")
                   << " other interior function values." << std::endl;
 
      libmesh_error();
    }
 
  if (n_other_interior_functions !=
      input.vector_variable_size("other_interior_function_subdomains"))
    {
      libMesh::out << "Error: " << n_other_interior_functions
                   << " other interior function types does not match "
                   << input.vector_variable_size("other_interior_function_subdomains")
                   << " other interior function subdomains." << std::endl;
 
      libmesh_error();
    }
 
  if (n_other_interior_functions !=
      input.vector_variable_size("other_interior_function_ids"))
    {
      libMesh::out << "Error: " << n_other_interior_functions
                   << " other interior function types does not match "
                   << input.vector_variable_size("other_interior_function_ids")
                   << " other interior function ids." << std::endl;
 
      libmesh_error();
    }
 
  for (unsigned int i=0; i != n_other_interior_functions; ++i)
    {
      const std::string func_type =
        input("other_interior_function_types", zero_string, i);
 
      const std::string func_value =
        input("other_interior_function_values", empty_string, i);
 
      const subdomain_id_type func_subdomain =
        input("other_interior_condition_subdomains", subdomain_id_type(0), i);
 
      const int func_id =
        input("other_interior_condition_ids", int(0), i);
 
      other_interior_functions[func_id][func_subdomain] =
        (new_function_base(func_type, func_value).release());
    }
 
  GETPOT_REGISTER(other_boundary_function_types);
  GETPOT_REGISTER(other_boundary_function_values);
  GETPOT_REGISTER(other_boundary_function_boundaries);
  GETPOT_REGISTER(other_boundary_function_ids);
 
  const unsigned int n_other_boundary_functions =
    input.vector_variable_size("other_boundary_function_types");
 
  if (n_other_boundary_functions !=
      input.vector_variable_size("other_boundary_function_values"))
    {
      libMesh::out << "Error: " << n_other_boundary_functions
                   << " other boundary function types does not match "
                   << input.vector_variable_size("other_boundary_function_values")
                   << " other boundary function values." << std::endl;
 
      libmesh_error();
    }
 
  if (n_other_boundary_functions !=
      input.vector_variable_size("other_boundary_function_boundaries"))
    {
      libMesh::out << "Error: " << n_other_boundary_functions
                   << " other boundary function types does not match "
                   << input.vector_variable_size("other_boundary_function_boundaries")
                   << " other boundary function boundaries." << std::endl;
 
      libmesh_error();
    }
 
  if (n_other_boundary_functions !=
      input.vector_variable_size("other_boundary_function_ids"))
    {
      libMesh::out << "Error: " << n_other_boundary_functions
                   << " other boundary function types does not match "
                   << input.vector_variable_size("other_boundary_function_ids")
                   << " other boundary function ids." << std::endl;
 
      libmesh_error();
    }
 
  for (unsigned int i=0; i != n_other_boundary_functions; ++i)
    {
      const std::string func_type =
        input("other_boundary_function_types", zero_string, i);
 
      const std::string func_value =
        input("other_boundary_function_values", empty_string, i);
 
      const boundary_id_type func_boundary =
        input("other_boundary_function_boundaries", boundary_id_type(0), i);
 
      const int func_id =
        input("other_boundary_function_ids", int(0), i);
 
      other_boundary_functions[func_id][func_boundary] =
        (new_function_base(func_type, func_value).release());
    }
 
  GETPOT_INPUT(run_simulation);
  GETPOT_INPUT(run_postprocess);
 
 
  GETPOT_REGISTER(fe_family);
  const unsigned int n_fe_family =
    std::max(1u, input.vector_variable_size("fe_family"));
  fe_family.resize(n_fe_family, "LAGRANGE");
  for (unsigned int i=0; i != n_fe_family; ++i)
    fe_family[i]              = input("fe_family", fe_family[i].c_str(), i);
  GETPOT_REGISTER(fe_order);
  const unsigned int n_fe_order =
    input.vector_variable_size("fe_order");
  fe_order.resize(n_fe_order, 1);
  for (unsigned int i=0; i != n_fe_order; ++i)
    fe_order[i]               = input("fe_order", (int)fe_order[i], i);
  GETPOT_INPUT(extra_quadrature_order);
 
 
  GETPOT_INPUT(analytic_jacobians);
  GETPOT_INPUT(verify_analytic_jacobians);
  GETPOT_INPUT(numerical_jacobian_h);
  GETPOT_INPUT(print_solution_norms);
  GETPOT_INPUT(print_solutions);
  GETPOT_INPUT(print_residual_norms);
  GETPOT_INPUT(print_residuals);
  GETPOT_INPUT(print_jacobian_norms);
  GETPOT_INPUT(print_jacobians);
  GETPOT_INPUT(print_element_solutions);
  GETPOT_INPUT(print_element_residuals);
  GETPOT_INPUT(print_element_jacobians);
 
 
  GETPOT_INPUT(constrain_in_solver);
  GETPOT_INPUT(use_petsc_snes);
  GETPOT_INPUT(time_solver_quiet);
  GETPOT_INPUT(solver_quiet);
  GETPOT_INPUT(solver_verbose);
  GETPOT_INPUT(reuse_preconditioner);
  GETPOT_INPUT(require_residual_reduction);
  GETPOT_INPUT(min_step_length);
  GETPOT_INT_INPUT(max_linear_iterations);
  GETPOT_INT_INPUT(max_nonlinear_iterations);
  GETPOT_INPUT(relative_step_tolerance);
  GETPOT_INPUT(relative_residual_tolerance);
  GETPOT_INPUT(absolute_residual_tolerance);
  GETPOT_INPUT(initial_linear_tolerance);
  GETPOT_INPUT(minimum_linear_tolerance);
  GETPOT_INPUT(linear_tolerance_multiplier);
 
 
  GETPOT_INT_INPUT(initial_sobolev_order);
  GETPOT_INT_INPUT(initial_extra_quadrature);
  GETPOT_INPUT(refine_uniformly);
  GETPOT_INPUT(indicator_type);
  GETPOT_INPUT(patch_reuse);
  GETPOT_INT_INPUT(sobolev_order);
 
  GETPOT_INPUT(system_config_file);
 
  std::vector<std::string> bad_variables =
    input.unidentified_arguments(variable_assignments);
 
  // The way unidentified_arguments() works can give us false
  // positives from repeated (overridden) variable assignments or from
  // other (e.g. PETSc) command line arguments.
  std::vector<std::string> actually_bad_variables;
  for (std::size_t i = 0; i < bad_variables.size(); ++i)
    {
      // If any of our ufo arguments start with a -, that's a false
      // positive from an unrelated command line argument.
      if (bad_variables[i].empty() || bad_variables[i][0] != '-')
        {
          std::string bad_variable_name =
            bad_variables[i].substr(0, bad_variables[i].find('='));
          if (!variable_names.count(bad_variable_name))
            actually_bad_variables.push_back(bad_variables[i]);
        }
      // Skip any option variable and (to be safe from false
      // positives, though it can create false negatives) any
      // subsequent potential argument
      else
        if (bad_variables.size() > (i+1) &&
            !bad_variables[i+1].empty() &&
            bad_variables[i+1][0] != '-')
          ++i;
    }
 
  if (this->comm().rank() == 0 && !actually_bad_variables.empty())
    {
      libMesh::err << "ERROR: Unrecognized variables:" << std::endl;
      for (auto var : actually_bad_variables)
        libMesh::err << var << std::endl;
      libMesh::err << "Not found among recognized variables:" << std::endl;
      for (std::size_t i = 0; i != variable_names.size(); ++i)
        libMesh::err << variable_assignments[i] << std::endl;
      libmesh_error();
    }
}

References absolute_residual_tolerance, analytic_jacobians, coarsegridx, coarsegridy, coarsegridz, coarsen_fraction, coarsen_threshold, coarserefinements, libMesh::ParallelObject::comm(), constrain_in_solver, deltat, deltat_reductions, dimension, dirichlet_condition_variables, dirichlet_conditions, libMesh::DISCRETE_L2, domain_edge_height, domain_edge_length, domain_edge_width, domain_xmin, domain_ymin, domain_zmin, domainfile, domaintype, elementorder, elementtype, end_time, libMesh::err, extra_quadrature_order, extrarefinements, fe_family, fe_order, global_tolerance, libMesh::H1, libMesh::H2, indicator_type, initial_adaptivesteps, initial_conditions, initial_extra_quadrature, initial_linear_tolerance, initial_sobolev_order, initial_timestep, libMesh::L2, linear_tolerance_multiplier, max_adaptivesteps, max_linear_iterations, max_nonlinear_iterations, mesh_partitioner_type, mesh_redistribute_func, min_step_length, minimum_linear_tolerance, n_timesteps, nelem_target, neumann_condition_variables, neumann_conditions, new_function_base(), numerical_jacobian_h, other_boundary_functions, other_interior_functions, libMesh::out, output_bz2, output_exodus, output_gmv, output_gz, output_nemesis, output_tecplot, output_xda, output_xdr, patch_reuse, periodic_boundaries, print_element_jacobians, print_element_residuals, print_element_solutions, print_jacobian_norms, print_jacobians, print_residual_norms, print_residuals, print_solution_norms, print_solutions, libMesh::Real, refine_fraction, refine_uniformly, relative_residual_tolerance, relative_step_tolerance, require_residual_reduction, reuse_preconditioner, run_postprocess, run_simulation, sobolev_order, solution_history_type, solver_quiet, solver_verbose, steadystate_tolerance, system_config_file, system_types, time_solver_quiet, timesolver_core, timesolver_maxgrowth, timesolver_norm, timesolver_theta, timesolver_tolerance, timesolver_upper_tolerance, transient, use_petsc_snes, verify_analytic_jacobians, write_exodus_error, write_gmv_error, write_interval, and write_tecplot_error.

Referenced by main().

read() [2/7]

void FEMParameters::read	(	GetPot &	input,
		const std::vector< std::string > *	other_variable_names = nullptr
	)

read() [3/7]

void FEMParameters::read	(	GetPot &	input,
		const std::vector< std::string > *	other_variable_names = nullptr
	)

read() [4/7]

void FEMParameters::read	(	GetPot &	input,
		const std::vector< std::string > *	other_variable_names = nullptr
	)

read() [5/7]

void FEMParameters::read	(	GetPot &	input,
		const std::vector< std::string > *	other_variable_names = nullptr
	)

read() [6/7]

void FEMParameters::read	(	GetPot &	input,
		const std::vector< std::string > *	other_variable_names = nullptr
	)

read() [7/7]

void FEMParameters::read	(	GetPot &	input,
		const std::vector< std::string > *	other_variable_names = nullptr
	)

Member Data Documentation

_communicator

const Parallel::Communicator& libMesh::ParallelObject::_communicator

protectedinherited

Definition at line 120 of file parallel_object.h.

Referenced by libMesh::EquationSystems::build_parallel_elemental_solution_vector(), libMesh::EquationSystems::build_parallel_solution_vector(), libMesh::StaticCondensation::close(), libMesh::ParallelObject::comm(), libMesh::CondensedEigenSystem::initialize_condensed_matrices(), libMesh::ParallelObject::n_processors(), libMesh::ParallelObject::operator=(), libMesh::ParallelObject::processor_id(), libMesh::BoundaryInfo::regenerate_id_sets(), libMesh::StaticCondensationDofMap::reinit(), and libMesh::BoundaryInfo::synchronize_global_id_set().

absolute_residual_tolerance

libMesh::Real FEMParameters::absolute_residual_tolerance

Definition at line 135 of file femparameters.h.

Referenced by read().

analytic_jacobians

bool FEMParameters::analytic_jacobians

Definition at line 115 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

coarsegridx

unsigned int FEMParameters::coarsegridx

Definition at line 51 of file femparameters.h.

Referenced by main(), and read().

coarsegridy

unsigned int FEMParameters::coarsegridy

Definition at line 51 of file femparameters.h.

Referenced by main(), and read().

coarsegridz

unsigned int FEMParameters::coarsegridz

Definition at line 51 of file femparameters.h.

Referenced by read().

coarsen_fraction

libMesh::Real FEMParameters::coarsen_fraction

Definition at line 62 of file femparameters.h.

Referenced by build_mesh_refinement(), build_mesh_refinement(), and read().

coarsen_threshold

libMesh::Real FEMParameters::coarsen_threshold

Definition at line 62 of file femparameters.h.

Referenced by build_mesh_refinement(), build_mesh_refinement(), and read().

coarserefinements

unsigned int FEMParameters::coarserefinements

Definition at line 52 of file femparameters.h.

Referenced by main(), and read().

constrain_in_solver

bool FEMParameters::constrain_in_solver

Definition at line 128 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

deltat

libMesh::Real FEMParameters::deltat

Definition at line 39 of file femparameters.h.

Referenced by read(), and set_system_parameters().

deltat_reductions

unsigned int FEMParameters::deltat_reductions

Definition at line 36 of file femparameters.h.

Referenced by read(), and set_system_parameters().

dimension

unsigned int FEMParameters::dimension

Definition at line 46 of file femparameters.h.

Referenced by main(), and read().

dirichlet_condition_variables

std::map< libMesh::boundary_id_type, std::vector< unsigned int > > FEMParameters::dirichlet_condition_variables

Definition at line 94 of file femparameters.h.

Referenced by read(), and set_system_parameters().

dirichlet_conditions

std::map< libMesh::boundary_id_type, libMesh::FunctionBase< libMesh::Number > * > FEMParameters::dirichlet_conditions

Definition at line 91 of file femparameters.h.

Referenced by read(), set_system_parameters(), and ~FEMParameters().

domain_edge_height

libMesh::Real FEMParameters::domain_edge_height

Definition at line 50 of file femparameters.h.

Referenced by read().

domain_edge_length

libMesh::Real FEMParameters::domain_edge_length

Definition at line 50 of file femparameters.h.

Referenced by main(), and read().

domain_edge_width

libMesh::Real FEMParameters::domain_edge_width

Definition at line 50 of file femparameters.h.

Referenced by main(), and read().

domain_xmin

libMesh::Real FEMParameters::domain_xmin

Definition at line 49 of file femparameters.h.

Referenced by main(), and read().

domain_ymin

libMesh::Real FEMParameters::domain_ymin

Definition at line 49 of file femparameters.h.

Referenced by main(), and read().

domain_zmin

libMesh::Real FEMParameters::domain_zmin

Definition at line 49 of file femparameters.h.

Referenced by read().

domainfile

std::string FEMParameters::domainfile

Definition at line 47 of file femparameters.h.

Referenced by build_domain(), main(), and read().

domaintype

std::string FEMParameters::domaintype

Definition at line 47 of file femparameters.h.

Referenced by read().

elementorder

libMesh::Real FEMParameters::elementorder

Definition at line 48 of file femparameters.h.

Referenced by read().

elementtype

std::string FEMParameters::elementtype

Definition at line 47 of file femparameters.h.

Referenced by main(), and read().

end_time

libMesh::Real FEMParameters::end_time

Definition at line 39 of file femparameters.h.

Referenced by read().

extra_quadrature_order

int FEMParameters::extra_quadrature_order

Definition at line 111 of file femparameters.h.

Referenced by read(), and set_system_parameters().

extrarefinements

unsigned int FEMParameters::extrarefinements

Definition at line 52 of file femparameters.h.

Referenced by main(), and read().

fe_family

std::vector< std::string > FEMParameters::fe_family

Definition at line 109 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

fe_order

std::vector< unsigned int > FEMParameters::fe_order

Definition at line 110 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

global_tolerance

libMesh::Real FEMParameters::global_tolerance

Definition at line 61 of file femparameters.h.

Referenced by build_mesh_refinement(), build_mesh_refinement(), main(), and read().

indicator_type

std::string FEMParameters::indicator_type

Definition at line 147 of file femparameters.h.

Referenced by build_error_estimator(), build_error_estimator(), and read().

initial_adaptivesteps

unsigned int FEMParameters::initial_adaptivesteps

Definition at line 64 of file femparameters.h.

Referenced by read().

initial_conditions

std::map< libMesh::subdomain_id_type, libMesh::FunctionBase< libMesh::Number > * > FEMParameters::initial_conditions

Definition at line 89 of file femparameters.h.

Referenced by read(), and ~FEMParameters().

initial_extra_quadrature

unsigned int FEMParameters::initial_extra_quadrature

Definition at line 142 of file femparameters.h.

Referenced by read().

initial_linear_tolerance

double FEMParameters::initial_linear_tolerance

Definition at line 136 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

initial_sobolev_order

unsigned int FEMParameters::initial_sobolev_order

Definition at line 141 of file femparameters.h.

Referenced by read().

initial_timestep

unsigned int FEMParameters::initial_timestep

Definition at line 34 of file femparameters.h.

Referenced by main(), read(), and write_output_headers().

linear_tolerance_multiplier

double FEMParameters::linear_tolerance_multiplier

Definition at line 137 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

max_adaptivesteps

unsigned int FEMParameters::max_adaptivesteps

Definition at line 63 of file femparameters.h.

Referenced by main(), and read().

max_linear_iterations

unsigned int FEMParameters::max_linear_iterations

Definition at line 133 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

max_nonlinear_iterations

unsigned int FEMParameters::max_nonlinear_iterations

Definition at line 133 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

mesh_partitioner_type

std::string FEMParameters::mesh_partitioner_type

Definition at line 56 of file femparameters.h.

Referenced by main(), and read().

mesh_redistribute_func

std::string FEMParameters::mesh_redistribute_func

Definition at line 53 of file femparameters.h.

Referenced by read().

min_step_length

libMesh::Real FEMParameters::min_step_length

Definition at line 132 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

minimum_linear_tolerance

double FEMParameters::minimum_linear_tolerance

Definition at line 136 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

n_timesteps

unsigned int FEMParameters::n_timesteps

Definition at line 34 of file femparameters.h.

Referenced by main(), and read().

nelem_target

unsigned int FEMParameters::nelem_target

Definition at line 60 of file femparameters.h.

Referenced by build_mesh_refinement(), build_mesh_refinement(), main(), and read().

neumann_condition_variables

std::map< libMesh::boundary_id_type, std::vector< unsigned int > > FEMParameters::neumann_condition_variables

Definition at line 95 of file femparameters.h.

Referenced by read().

neumann_conditions

std::map< libMesh::boundary_id_type, libMesh::FunctionBase< libMesh::Number > * > FEMParameters::neumann_conditions

Definition at line 92 of file femparameters.h.

Referenced by read(), and ~FEMParameters().

numerical_jacobian_h

libMesh::Real FEMParameters::numerical_jacobian_h

Definition at line 117 of file femparameters.h.

Referenced by read(), and set_system_parameters().

other_boundary_functions

std::map< int, std::map< libMesh::boundary_id_type, libMesh::FunctionBase< libMesh::Number > * > > FEMParameters::other_boundary_functions

Definition at line 101 of file femparameters.h.

Referenced by read(), and ~FEMParameters().

other_interior_functions

std::map< int, std::map< libMesh::subdomain_id_type, libMesh::FunctionBase< libMesh::Number > * > > FEMParameters::other_interior_functions

Definition at line 98 of file femparameters.h.

Referenced by read(), and ~FEMParameters().

output_bz2

bool FEMParameters::output_bz2

Definition at line 72 of file femparameters.h.

Referenced by numbered_filename(), and read().

output_exodus

bool FEMParameters::output_exodus

Definition at line 74 of file femparameters.h.

Referenced by read(), write_output(), write_output(), and write_output().

output_gmv

bool FEMParameters::output_gmv

Definition at line 73 of file femparameters.h.

Referenced by read(), write_output(), write_output(), and write_output().

output_gz

bool FEMParameters::output_gz

Definition at line 72 of file femparameters.h.

Referenced by numbered_filename(), and read().

output_nemesis

bool FEMParameters::output_nemesis

Definition at line 74 of file femparameters.h.

Referenced by read().

output_tecplot

bool FEMParameters::output_tecplot

Definition at line 73 of file femparameters.h.

Referenced by read(), and write_output().

output_xda

bool FEMParameters::output_xda

Definition at line 71 of file femparameters.h.

Referenced by read(), and write_output().

output_xdr

bool FEMParameters::output_xdr

Definition at line 71 of file femparameters.h.

Referenced by read(), and write_output().

patch_reuse

bool FEMParameters::patch_reuse

Definition at line 148 of file femparameters.h.

Referenced by build_error_estimator(), and read().

periodic_boundaries

std::vector< libMesh::PeriodicBoundary > FEMParameters::periodic_boundaries

Definition at line 85 of file femparameters.h.

Referenced by read().

print_element_jacobians

bool FEMParameters::print_element_jacobians

Definition at line 124 of file femparameters.h.

Referenced by read(), and set_system_parameters().

print_element_residuals

bool FEMParameters::print_element_residuals

Definition at line 123 of file femparameters.h.

Referenced by read(), and set_system_parameters().

print_element_solutions

bool FEMParameters::print_element_solutions

Definition at line 122 of file femparameters.h.

Referenced by read().

print_jacobian_norms

bool FEMParameters::print_jacobian_norms

Definition at line 121 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

print_jacobians

bool FEMParameters::print_jacobians

Definition at line 121 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

print_residual_norms

bool FEMParameters::print_residual_norms

Definition at line 120 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

print_residuals

bool FEMParameters::print_residuals

Definition at line 120 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

print_solution_norms

bool FEMParameters::print_solution_norms

Definition at line 119 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

print_solutions

bool FEMParameters::print_solutions

Definition at line 119 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

refine_fraction

libMesh::Real FEMParameters::refine_fraction

Definition at line 62 of file femparameters.h.

Referenced by build_mesh_refinement(), build_mesh_refinement(), and read().

refine_uniformly

bool FEMParameters::refine_uniformly

Definition at line 146 of file femparameters.h.

Referenced by main(), and read().

relative_residual_tolerance

libMesh::Real FEMParameters::relative_residual_tolerance

Definition at line 134 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

relative_step_tolerance

libMesh::Real FEMParameters::relative_step_tolerance

Definition at line 134 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

require_residual_reduction

bool FEMParameters::require_residual_reduction

Definition at line 131 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

reuse_preconditioner

bool FEMParameters::reuse_preconditioner

Definition at line 131 of file femparameters.h.

Referenced by main(), and read().

run_postprocess

bool FEMParameters::run_postprocess

Definition at line 105 of file femparameters.h.

Referenced by read().

run_simulation

bool FEMParameters::run_simulation

Definition at line 105 of file femparameters.h.

Referenced by read(), write_output_footers(), and write_output_headers().

sobolev_order

unsigned int FEMParameters::sobolev_order

Definition at line 149 of file femparameters.h.

Referenced by read().

solution_history_type

std::string FEMParameters::solution_history_type

Definition at line 38 of file femparameters.h.

Referenced by read(), and set_system_parameters().

solver_quiet

bool FEMParameters::solver_quiet

Definition at line 130 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

solver_verbose

bool FEMParameters::solver_verbose

Definition at line 130 of file femparameters.h.

Referenced by read(), set_system_parameters(), and set_system_parameters().

steadystate_tolerance

libMesh::Real FEMParameters::steadystate_tolerance

Definition at line 41 of file femparameters.h.

Referenced by read(), write_output_footers(), and write_output_headers().

system_config_file

std::string FEMParameters::system_config_file

Definition at line 153 of file femparameters.h.

Referenced by read().

system_types

std::vector< std::string > FEMParameters::system_types

Definition at line 78 of file femparameters.h.

Referenced by read().

time_solver_quiet

bool FEMParameters::time_solver_quiet

Definition at line 130 of file femparameters.h.

Referenced by read(), and set_system_parameters().

timesolver_core

std::string FEMParameters::timesolver_core

Definition at line 37 of file femparameters.h.

Referenced by read(), and set_system_parameters().

timesolver_maxgrowth

libMesh::Real FEMParameters::timesolver_maxgrowth

Definition at line 40 of file femparameters.h.

Referenced by read(), and set_system_parameters().

timesolver_norm

std::vector< libMesh::FEMNormType > FEMParameters::timesolver_norm

Definition at line 42 of file femparameters.h.

Referenced by read(), and set_system_parameters().

timesolver_theta

libMesh::Real FEMParameters::timesolver_theta

Definition at line 39 of file femparameters.h.

Referenced by read(), and set_system_parameters().

timesolver_tolerance

libMesh::Real FEMParameters::timesolver_tolerance

Definition at line 40 of file femparameters.h.

Referenced by main(), read(), set_system_parameters(), write_output_footers(), and write_output_headers().

timesolver_upper_tolerance

libMesh::Real FEMParameters::timesolver_upper_tolerance

Definition at line 41 of file femparameters.h.

Referenced by read(), and set_system_parameters().

transient

bool FEMParameters::transient

Definition at line 35 of file femparameters.h.

Referenced by read(), and set_system_parameters().

use_petsc_snes

bool FEMParameters::use_petsc_snes

Definition at line 129 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

verify_analytic_jacobians

libMesh::Real FEMParameters::verify_analytic_jacobians

Definition at line 116 of file femparameters.h.

Referenced by read(), set_system_parameters(), set_system_parameters(), and set_system_parameters().

write_exodus_error

bool FEMParameters::write_exodus_error

Definition at line 70 of file femparameters.h.

Referenced by read().

write_gmv_error

bool FEMParameters::write_gmv_error

Definition at line 69 of file femparameters.h.

Referenced by read().

write_interval

unsigned int FEMParameters::write_interval

Definition at line 68 of file femparameters.h.

Referenced by read().

write_tecplot_error

bool FEMParameters::write_tecplot_error

Definition at line 69 of file femparameters.h.

Referenced by read().

---

The documentation for this class was generated from the following files:

• examples/adjoints/adjoints_ex1/femparameters.h
• examples/adjoints/adjoints_ex2/femparameters.h
• examples/adjoints/adjoints_ex3/femparameters.h
• examples/adjoints/adjoints_ex4/femparameters.h
• examples/adjoints/adjoints_ex5/femparameters.h
• examples/adjoints/adjoints_ex6/femparameters.h
• examples/adjoints/adjoints_ex7/femparameters.h
• examples/adjoints/adjoints_ex1/femparameters.C