A generic sampler to support parallel active learning. More...
#include <GenericActiveLearningSampler.h>
Public Types | |
| enum | SampleMode { SampleMode::GLOBAL, SampleMode::LOCAL } |
| typedef DataFileName | DataFileParameterType |
Public Member Functions | |
| GenericActiveLearningSampler (const InputParameters ¶meters) | |
| const std::vector< std::vector< Real > > & | getSampleTries () const |
| Return random samples for the GP to try in the reporter class. More... | |
| dof_id_type | getNumParallelProposals () const |
| Return the number of parallel proposals. More... | |
| std::vector< Real > | getNextLocalRow () |
| dof_id_type | getNumberOfRows () const |
| dof_id_type | getNumberOfCols () const |
| dof_id_type | getNumberOfLocalRows () const |
| const LocalRankConfig & | getRankConfig (bool batch_mode) const |
| virtual bool | isAdaptiveSamplingCompleted () const |
| libMesh::Parallel::Communicator & | getLocalComm () |
| virtual bool | enabled () const |
| std::shared_ptr< MooseObject > | getSharedPtr () |
| std::shared_ptr< const MooseObject > | getSharedPtr () const |
| bool | isKokkosObject () const |
| MooseApp & | getMooseApp () const |
| const std::string & | type () const |
| const std::string & | name () const |
| std::string | typeAndName () const |
| MooseObjectParameterName | uniqueParameterName (const std::string ¶meter_name) const |
| MooseObjectName | uniqueName () const |
| const InputParameters & | parameters () const |
| const hit::Node * | getHitNode () const |
| bool | hasBase () const |
| const std::string & | getBase () const |
| const T & | getParam (const std::string &name) const |
| std::vector< std::pair< T1, T2 > > | getParam (const std::string ¶m1, const std::string ¶m2) const |
| const T * | queryParam (const std::string &name) const |
| const T & | getRenamedParam (const std::string &old_name, const std::string &new_name) const |
| T | getCheckedPointerParam (const std::string &name, const std::string &error_string="") const |
| bool | haveParameter (const std::string &name) const |
| bool | isParamValid (const std::string &name) const |
| bool | isParamSetByUser (const std::string &name) const |
| void | connectControllableParams (const std::string ¶meter, const std::string &object_type, const std::string &object_name, const std::string &object_parameter) const |
| void | paramError (const std::string ¶m, Args... args) const |
| void | paramWarning (const std::string ¶m, Args... args) const |
| void | paramWarning (const std::string ¶m, Args... args) const |
| void | paramInfo (const std::string ¶m, Args... args) const |
| std::string | messagePrefix (const bool hit_prefix=true) const |
| std::string | errorPrefix (const std::string &) const |
| void | mooseError (Args &&... args) const |
| void | mooseDocumentedError (const std::string &repo_name, const unsigned int issue_num, Args &&... args) const |
| void | mooseErrorNonPrefixed (Args &&... args) const |
| void | mooseWarning (Args &&... args) const |
| void | mooseWarning (Args &&... args) const |
| void | mooseWarningNonPrefixed (Args &&... args) const |
| void | mooseWarningNonPrefixed (Args &&... args) const |
| void | mooseDeprecated (Args &&... args) const |
| void | mooseDeprecated (Args &&... args) const |
| void | mooseDeprecatedNoTrace (Args &&... args) const |
| void | mooseInfo (Args &&... args) const |
| void | callMooseError (std::string msg, const bool with_prefix, const hit::Node *node=nullptr, const bool show_trace=true) const |
| std::string | getDataFileName (const std::string ¶m) const |
| std::string | getDataFileNameByName (const std::string &relative_path) const |
| std::string | getDataFilePath (const std::string &relative_path) const |
| virtual void | initialSetup () |
| virtual void | timestepSetup () |
| virtual void | jacobianSetup () |
| virtual void | residualSetup () |
| virtual void | subdomainSetup () |
| virtual void | customSetup (const ExecFlagType &) |
| const ExecFlagEnum & | getExecuteOnEnum () const |
| PerfGraph & | perfGraph () |
| T & | getSampler (const std::string &name) |
| Sampler & | getSampler (const std::string &name) |
| T & | getSamplerByName (const SamplerName &name) |
| Sampler & | getSamplerByName (const SamplerName &name) |
| const VectorPostprocessorValue & | getVectorPostprocessorValue (const std::string ¶m_name, const std::string &vector_name) const |
| const VectorPostprocessorValue & | getVectorPostprocessorValue (const std::string ¶m_name, const std::string &vector_name, bool needs_broadcast) const |
| const VectorPostprocessorValue & | getVectorPostprocessorValueByName (const VectorPostprocessorName &name, const std::string &vector_name) const |
| const VectorPostprocessorValue & | getVectorPostprocessorValueByName (const VectorPostprocessorName &name, const std::string &vector_name, bool needs_broadcast) const |
| const VectorPostprocessorValue & | getVectorPostprocessorValueOld (const std::string ¶m_name, const std::string &vector_name) const |
| const VectorPostprocessorValue & | getVectorPostprocessorValueOld (const std::string ¶m_name, const std::string &vector_name, bool needs_broadcast) const |
| const VectorPostprocessorValue & | getVectorPostprocessorValueOldByName (const VectorPostprocessorName &name, const std::string &vector_name) const |
| const VectorPostprocessorValue & | getVectorPostprocessorValueOldByName (const VectorPostprocessorName &name, const std::string &vector_name, bool needs_broadcast) const |
| const ScatterVectorPostprocessorValue & | getScatterVectorPostprocessorValue (const std::string ¶m_name, const std::string &vector_name) const |
| const ScatterVectorPostprocessorValue & | getScatterVectorPostprocessorValueByName (const VectorPostprocessorName &name, const std::string &vector_name) const |
| const ScatterVectorPostprocessorValue & | getScatterVectorPostprocessorValueOld (const std::string ¶m_name, const std::string &vector_name) const |
| const ScatterVectorPostprocessorValue & | getScatterVectorPostprocessorValueOldByName (const VectorPostprocessorName &name, const std::string &vector_name) const |
| bool | hasVectorPostprocessor (const std::string ¶m_name, const std::string &vector_name) const |
| bool | hasVectorPostprocessor (const std::string ¶m_name) const |
| bool | hasVectorPostprocessorByName (const VectorPostprocessorName &name, const std::string &vector_name) const |
| bool | hasVectorPostprocessorByName (const VectorPostprocessorName &name) const |
| const VectorPostprocessorName & | getVectorPostprocessorName (const std::string ¶m_name) const |
| DenseMatrix< Real > | getGlobalSamples () |
| DenseMatrix< Real > | getGlobalSamples () |
| DenseMatrix< Real > | getLocalSamples () |
| DenseMatrix< Real > | getLocalSamples () |
| dof_id_type | getLocalRowBegin () const |
| dof_id_type | getLocalRowBegin () const |
| dof_id_type | getLocalRowEnd () const |
| dof_id_type | getLocalRowEnd () const |
| const Distribution & | getDistribution (const std::string &name) const |
| const T & | getDistribution (const std::string &name) const |
| const Distribution & | getDistribution (const std::string &name) const |
| const T & | getDistribution (const std::string &name) const |
| const Distribution & | getDistributionByName (const DistributionName &name) const |
| const T & | getDistributionByName (const std::string &name) const |
| const Distribution & | getDistributionByName (const DistributionName &name) const |
| const T & | getDistributionByName (const std::string &name) const |
| bool | isVectorPostprocessorDistributed (const std::string ¶m_name) const |
| bool | isVectorPostprocessorDistributed (const std::string ¶m_name) const |
| bool | isVectorPostprocessorDistributedByName (const VectorPostprocessorName &name) const |
| bool | isVectorPostprocessorDistributedByName (const VectorPostprocessorName &name) const |
| const Parallel::Communicator & | comm () const |
| processor_id_type | n_processors () const |
| processor_id_type | processor_id () const |
| bool | isImplicit () |
| Moose::StateArg | determineState () const |
Static Public Member Functions | |
| static InputParameters | validParams () |
| static void | callMooseError (MooseApp *const app, const InputParameters ¶ms, std::string msg, const bool with_prefix, const hit::Node *node, const bool show_trace=true) |
Public Attributes | |
| usingCombinedWarningSolutionWarnings | |
| const ConsoleStream | _console |
Static Public Attributes | |
| static const std::string | type_param |
| static const std::string | name_param |
| static const std::string | unique_name_param |
| static const std::string | app_param |
| static const std::string | moose_base_param |
| static const std::string | kokkos_object_param |
Protected Member Functions | |
| virtual void | executeSetUp () override |
| Gather all the samples. More... | |
| virtual Real | computeSample (dof_id_type row_index, dof_id_type col_index) override |
| Return the sample for the given row and column. More... | |
| void | setNumberOfRandomSeeds (std::size_t number) |
| Real | getRand (std::size_t n, unsigned int index=0) const |
| unsigned int | getRandl (std::size_t n, unsigned int lower, unsigned int upper, unsigned int index=0) const |
| virtual LocalRankConfig | constructRankConfig (bool batch_mode) const |
| void | flagInvalidSolutionInternal (const InvalidSolutionID invalid_solution_id) const |
| InvalidSolutionID | registerInvalidSolutionInternal (const std::string &message, const bool warning) const |
| PerfID | registerTimedSection (const std::string §ion_name, const unsigned int level) const |
| PerfID | registerTimedSection (const std::string §ion_name, const unsigned int level, const std::string &live_message, const bool print_dots=true) const |
| std::string | timedSectionName (const std::string §ion_name) const |
| virtual void | addVectorPostprocessorDependencyHelper (const VectorPostprocessorName &) const |
| const ReporterContextBase & | getReporterContextBaseByName (const ReporterName &reporter_name) const |
| const ReporterName & | getReporterName (const std::string ¶m_name) const |
| virtual void | addReporterDependencyHelper (const ReporterName &) |
| void | setNumberOfRows (dof_id_type n_rows) |
| void | setNumberOfRows (dof_id_type n_rows) |
| void | setNumberOfCols (dof_id_type n_cols) |
| void | setNumberOfCols (dof_id_type n_cols) |
| virtual void | computeSampleMatrix (DenseMatrix< Real > &matrix) |
| virtual void | computeSampleMatrix (DenseMatrix< Real > &matrix) |
| virtual void | computeLocalSampleMatrix (DenseMatrix< Real > &matrix) |
| virtual void | computeLocalSampleMatrix (DenseMatrix< Real > &matrix) |
| virtual void | computeSampleRow (dof_id_type i, std::vector< Real > &data) |
| virtual void | computeSampleRow (dof_id_type i, std::vector< Real > &data) |
| virtual void | advanceGenerators (const dof_id_type count) |
| virtual void | advanceGenerators (const dof_id_type count) |
| virtual void | advanceGenerator (const unsigned int seed_index, const dof_id_type count) |
| virtual void | advanceGenerator (const unsigned int seed_index, const dof_id_type count) |
| void | setAutoAdvanceGenerators (const bool state) |
| void | setAutoAdvanceGenerators (const bool state) |
| virtual void | executeTearDown () |
| virtual void | executeTearDown () |
| const T & | getReporterValue (const std::string ¶m_name, const std::size_t time_index=0) |
| const T & | getReporterValue (const std::string ¶m_name, ReporterMode mode, const std::size_t time_index=0) |
| const T & | getReporterValue (const std::string ¶m_name, const std::size_t time_index=0) |
| const T & | getReporterValue (const std::string ¶m_name, ReporterMode mode, const std::size_t time_index=0) |
| const T & | getReporterValueByName (const ReporterName &reporter_name, const std::size_t time_index=0) |
| const T & | getReporterValueByName (const ReporterName &reporter_name, ReporterMode mode, const std::size_t time_index=0) |
| const T & | getReporterValueByName (const ReporterName &reporter_name, const std::size_t time_index=0) |
| const T & | getReporterValueByName (const ReporterName &reporter_name, ReporterMode mode, const std::size_t time_index=0) |
| bool | hasReporterValue (const std::string ¶m_name) const |
| bool | hasReporterValue (const std::string ¶m_name) const |
| bool | hasReporterValue (const std::string ¶m_name) const |
| bool | hasReporterValue (const std::string ¶m_name) const |
| bool | hasReporterValueByName (const ReporterName &reporter_name) const |
| bool | hasReporterValueByName (const ReporterName &reporter_name) const |
| bool | hasReporterValueByName (const ReporterName &reporter_name) const |
| bool | hasReporterValueByName (const ReporterName &reporter_name) const |
Protected Attributes | |
| std::vector< Distribution const * > | _distributions |
| Storage for distribution objects to be utilized. More... | |
| const unsigned int | _num_parallel_proposals |
| Number of parallel proposals to be made and subApps to be executed. More... | |
| const std::vector< unsigned int > & | _sorted_indices |
| The selected sample indices to evaluate the subApp. More... | |
| const std::vector< Real > & | _initial_values |
| Initial values of the input params to get the MCMC scheme started. More... | |
| std::vector< std::vector< Real > > | _new_samples |
| Vectors of new proposed samples. More... | |
| const dof_id_type | _min_procs_per_row |
| const dof_id_type | _max_procs_per_row |
| libMesh::Parallel::Communicator | _local_comm |
| const bool & | _enabled |
| MooseApp & | _app |
| Factory & | _factory |
| ActionFactory & | _action_factory |
| const std::string & | _type |
| const std::string & | _name |
| const InputParameters & | _pars |
| const ExecFlagEnum & | _execute_enum |
| const ExecFlagType & | _current_execute_flag |
| MooseApp & | _pg_moose_app |
| const std::string | _prefix |
| const Parallel::Communicator & | _communicator |
| const InputParameters & | _ti_params |
| FEProblemBase & | _ti_feproblem |
| bool | _is_implicit |
| Real & | _t |
| const Real & | _t_old |
| int & | _t_step |
| Real & | _dt |
| Real & | _dt_old |
| bool | _is_transient |
Private Attributes | |
| const unsigned int | _num_tries |
| Number of samples to propose in each iteration (not all are sent for subApp evals) More... | |
| std::vector< std::vector< Real > > | _inputs_all |
| Storage for all the proposed samples. More... | |
A generic sampler to support parallel active learning.
Definition at line 19 of file GenericActiveLearningSampler.h.
| GenericActiveLearningSampler::GenericActiveLearningSampler | ( | const InputParameters & | parameters | ) |
Definition at line 44 of file GenericActiveLearningSampler.C.
|
overrideprotectedvirtual |
Return the sample for the given row and column.
Implements Sampler.
Definition at line 104 of file GenericActiveLearningSampler.C.
|
overrideprotectedvirtual |
Gather all the samples.
Reimplemented from Sampler.
Definition at line 77 of file GenericActiveLearningSampler.C.
|
inline |
Return the number of parallel proposals.
Definition at line 34 of file GenericActiveLearningSampler.h.
| const std::vector< std::vector< Real > > & GenericActiveLearningSampler::getSampleTries | ( | ) | const |
Return random samples for the GP to try in the reporter class.
Definition at line 71 of file GenericActiveLearningSampler.C.
|
static |
Definition at line 17 of file GenericActiveLearningSampler.C.
|
protected |
Storage for distribution objects to be utilized.
Definition at line 43 of file GenericActiveLearningSampler.h.
Referenced by executeSetUp(), and GenericActiveLearningSampler().
|
protected |
Initial values of the input params to get the MCMC scheme started.
Definition at line 52 of file GenericActiveLearningSampler.h.
Referenced by computeSample().
|
private |
Storage for all the proposed samples.
Definition at line 62 of file GenericActiveLearningSampler.h.
Referenced by executeSetUp(), GenericActiveLearningSampler(), and getSampleTries().
|
protected |
Vectors of new proposed samples.
Definition at line 55 of file GenericActiveLearningSampler.h.
Referenced by computeSample(), executeSetUp(), and GenericActiveLearningSampler().
|
protected |
Number of parallel proposals to be made and subApps to be executed.
Definition at line 46 of file GenericActiveLearningSampler.h.
Referenced by computeSample(), GenericActiveLearningSampler(), and getNumParallelProposals().
|
private |
Number of samples to propose in each iteration (not all are sent for subApp evals)
Definition at line 59 of file GenericActiveLearningSampler.h.
Referenced by executeSetUp(), and GenericActiveLearningSampler().
|
protected |
The selected sample indices to evaluate the subApp.
Definition at line 49 of file GenericActiveLearningSampler.h.
Referenced by executeSetUp().
1.8.14