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LoadCovarianceDataAction.C
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7 //* Licensed under LGPL 2.1, please see LICENSE for details
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9 
10 #ifdef MOOSE_LIBTORCH_ENABLED
11 
13 #include "CovarianceFunctionBase.h"
15 #include "FEProblem.h"
16 #include "StochasticToolsApp.h"
17 
18 registerMooseAction("StochasticToolsApp", LoadCovarianceDataAction, "load_covariance_data");
19 
20 namespace
21 {
22 
23 using HyperParameterMap = CovarianceFunctionBase::HyperParameterMap;
24 
25 std::vector<Real>
26 exportHyperParameter(const torch::Tensor & tensor)
27 {
28  const auto flattened = tensor.reshape({-1}).contiguous();
29  return {flattened.data_ptr<Real>(), flattened.data_ptr<Real>() + flattened.numel()};
30 }
31 
32 void
33 assignRequiredHyperParameter(InputParameters & params,
34  const std::string & param_name,
35  const torch::Tensor & tensor)
36 {
37  if (params.have_parameter<Real>(param_name))
38  {
40  mooseError("Expected scalar hyperparameter for ", param_name, ".");
41  params.set<Real>(param_name) = tensor.item<Real>();
42  }
43  else if (params.have_parameter<unsigned int>(param_name))
44  {
46  mooseError("Expected scalar hyperparameter for ", param_name, ".");
47  params.set<unsigned int>(param_name) = cast_int<unsigned int>(tensor.item<Real>());
48  }
49  else if (params.have_parameter<std::vector<Real>>(param_name))
50  {
52  mooseError("Expected vector hyperparameter for ", param_name, ".");
53  params.set<std::vector<Real>>(param_name) = exportHyperParameter(tensor);
54  }
55  else
56  mooseError("Unsupported hyperparameter type for ", param_name, ".");
57 }
58 
59 void
60 loadRequiredHyperParameter(InputParameters & params,
61  const UserObjectName & object_name,
62  const std::string & param_name,
63  const HyperParameterMap & hyperparameters)
64 {
65  const auto expected_name = std::string(object_name) + ":" + param_name;
66  const auto hyperparam_it = hyperparameters.find(expected_name);
67  if (hyperparam_it != hyperparameters.end())
68  assignRequiredHyperParameter(params, param_name, hyperparam_it->second);
69 }
70 
71 } // namespace
72 
75 {
77  params.addClassDescription("Calls load method on SurrogateModel objects contained within the "
78  "`[Surrogates]` input block, if a filename is given.");
79  return params;
80 }
81 
83 {
84 }
85 
86 void
88 {
89  std::vector<SurrogateModel *> objects;
90  _app.theWarehouse().query().condition<AttribSystem>("SurrogateModel").queryInto(objects);
91  for (auto model_ptr : objects)
92  {
93  auto * gp_gen = dynamic_cast<GaussianProcessSurrogate *>(model_ptr);
94  if (gp_gen && model_ptr->isParamValid("filename"))
95  load(*gp_gen);
96  }
97 }
98 
99 void
101 {
102  // We grab all the necessary information that is needed to reconstruct the
103  // covariance structure for the GP
104  const std::string & covar_type = model.getGP().getCovarType();
105  const std::string & covar_name = model.getGP().getCovarName();
106  const std::map<UserObjectName, std::string> & dep_covar_types =
107  model.getGP().getDependentCovarTypes();
108  const std::vector<UserObjectName> & dep_covar_names = model.getGP().getDependentCovarNames();
109 
110  // This is for the covariance on the very top, the lower-level covariances are
111  // all assumed to have num_outputs=1.
112  const unsigned int num_outputs = model.getGP().getCovarNumOutputs();
113  const HyperParameterMap & hyperparameters = model.getGP().getHyperParamMap();
114 
115  // We start by creating and loading the lower-level covariances if they need
116  // to be present. Right now we can only load a complex covariance which has
117  // a one-level dependency depth.
118  // TODO: Extend this to arbitrary dependency depths. Maybe we could use a graph.
119  for (const auto & it : dep_covar_types)
120  {
121  const auto & name = it.first;
122  const auto & type = it.second;
124 
125  // We make sure that every required parameter is added so that the object
126  // can be constructed. The non-required hyperparameters (if present in the
127  // parameter maps) will be inserted later.
128  const auto param_list = covar_params.getParametersList();
129  for (const auto & param : param_list)
130  if (covar_params.isParamRequired(param))
131  loadRequiredHyperParameter(covar_params, name, param, hyperparameters);
132 
133  _problem->addObject<CovarianceFunctionBase>(type, name, covar_params, /*threaded=*/false);
134  }
135 
136  InputParameters covar_params = _factory.getValidParams(covar_type);
137  covar_params.set<unsigned int>("num_outputs") = num_outputs;
138  covar_params.set<std::vector<UserObjectName>>("covariance_functions") = dep_covar_names;
139 
140  const auto param_list = covar_params.getParametersList();
141  for (const auto & param : param_list)
142  // We make sure that every required parameter is added so that the object
143  // can be constructed. The non-required hyperparameters (if present in the
144  // parameter maps) will be inserted later.
145  if (covar_params.isParamRequired(param))
146  loadRequiredHyperParameter(covar_params, covar_name, param, hyperparameters);
147 
148  auto covar_object = _problem->addObject<CovarianceFunctionBase>(
149  covar_type, covar_name, covar_params, /* threaded = */ false);
150  covar_object[0]->loadHyperParamMap(hyperparameters);
151 
152  model.setupCovariance(covar_name);
153 }
154 
155 #endif
virtual void act() override
static bool isVectorHyperParameter(const torch::Tensor &tensor)
Return true if a hyperparameter tensor stores a vector of values.
std::set< std::string > getParametersList() const
void mooseError(Args &&... args)
Factory & _factory
std::unordered_map< std::string, torch::Tensor > HyperParameterMap
MooseApp & _app
T & set(const std::string &name, bool quiet_mode=false)
static bool isScalarHyperParameter(const torch::Tensor &tensor)
Return true if a hyperparameter tensor stores one scalar value.
InputParameters getValidParams(const std::string &name) const
Base class for covariance functions that are used in Gaussian Processes.
void load(GaussianProcessSurrogate &model)
const std::string & name() const
static InputParameters validParams()
static InputParameters validParams()
LoadCovarianceDataAction(const InputParameters &params)
const std::string & type() const
void loadHyperParamMap(const HyperParameterMap &map)
Load some hyperparameters into the local map contained in this object.
const PertinentGeochemicalSystem model(database, {"H2O", "H+", "HCO3-", "O2(aq)", "Ca++", ">(s)FeOH", "radius_neg1", "radius_neg1.5"}, {"Calcite"}, {}, {"Calcite_asdf"}, {"CH4(aq)"}, {">(s)FeOCa+"}, "O2(aq)", "e-")
bool have_parameter(std::string_view name) const
DIE A HORRIBLE DEATH HERE typedef LIBMESH_DEFAULT_SCALAR_TYPE Real
Query query()
bool isParamRequired(const std::string &name) const
void addClassDescription(const std::string &doc_string)
std::shared_ptr< FEProblemBase > & _problem
TheWarehouse & theWarehouse()
registerMooseAction("StochasticToolsApp", LoadCovarianceDataAction, "load_covariance_data")