AssemblyA2 Struct Reference

#include <assembly.h>

Inheritance diagram for AssemblyA2:

Public Member Functions
	AssemblyA2 (ElasticityRBConstruction &rb_sys_in)
virtual void	interior_assembly (FEMContext &c)
	Perform the element interior assembly. More...
virtual void	boundary_assembly (FEMContext &c)
	Perform the element boundary assembly. More...
virtual void	get_nodal_values (std::vector< dof_id_type > &, DenseMatrix< Number > &, DenseVector< Number > &, const System &, const Node &)
	Get values to add to the matrix or rhs vector based on node. More...

Static Public Member Functions
static std::string	get_info ()
	Gets a string containing the reference information. More...
static void	print_info (std::ostream &out_stream=libMesh::out)
	Prints the reference information, by default to libMesh::out. More...
static unsigned int	n_objects ()
	Prints the number of outstanding (created, but not yet destroyed) objects. More...
static void	enable_print_counter_info ()
	Methods to enable/disable the reference counter output from print_info() More...
static void	disable_print_counter_info ()
static std::string	get_info ()
	Gets a string containing the reference information. More...
static void	print_info (std::ostream &out_stream=libMesh::out)
	Prints the reference information, by default to libMesh::out. More...
static unsigned int	n_objects ()
	Prints the number of outstanding (created, but not yet destroyed) objects. More...
static void	enable_print_counter_info ()
	Methods to enable/disable the reference counter output from print_info() More...
static void	disable_print_counter_info ()

Public Attributes
ElasticityRBConstruction &	rb_sys
	The ElasticityRBConstruction object that will use this assembly. More...

Protected Types
typedef std::map< std::string, std::pair< unsigned int, unsigned int > >	Counts
	Data structure to log the information. More...
typedef std::map< std::string, std::pair< unsigned int, unsigned int > >	Counts
	Data structure to log the information. More...

Protected Member Functions
void	increment_constructor_count (const std::string &name) noexcept
	Increments the construction counter. More...
void	increment_destructor_count (const std::string &name) noexcept
	Increments the destruction counter. More...
void	increment_constructor_count (const std::string &name) noexcept
	Increments the construction counter. More...
void	increment_destructor_count (const std::string &name) noexcept
	Increments the destruction counter. More...

Static Protected Attributes
static Counts	_counts
	Actually holds the data. More...
static Threads::atomic< unsigned int >	_n_objects
	The number of objects. More...
static Threads::spin_mutex	_mutex
	Mutual exclusion object to enable thread-safe reference counting. More...
static bool	_enable_print_counter = true
	Flag to control whether reference count information is printed when print_info is called. More...
static Counts	_counts
	Actually holds the data. More...
static Threads::atomic< unsigned int >	_n_objects
	The number of objects. More...
static Threads::spin_mutex	_mutex
	Mutual exclusion object to enable thread-safe reference counting. More...
static bool	_enable_print_counter = true
	Flag to control whether reference count information is printed when print_info is called. More...

Detailed Description

Definition at line 104 of file assembly.h.

Member Typedef Documentation

Counts [1/2]

typedef std::map<std::string, std::pair<unsigned int, unsigned int> > libMesh::ReferenceCounter::Counts

protectedinherited

Data structure to log the information.

The log is identified by the class name.

Definition at line 119 of file reference_counter.h.

Counts [2/2]

typedef std::map<std::string, std::pair<unsigned int, unsigned int> > libMesh::ReferenceCounter::Counts

protectedinherited

Data structure to log the information.

The log is identified by the class name.

Definition at line 119 of file reference_counter.h.

Constructor & Destructor Documentation

AssemblyA2()

AssemblyA2::AssemblyA2 ( ElasticityRBConstruction &  rb_sys_in )

inline

Definition at line 107 of file assembly.h.

    :
    ElasticityAssembly(rb_sys_in)
  {}

Member Function Documentation

boundary_assembly()

virtual void AssemblyA2::boundary_assembly ( FEMContext &  )

inlinevirtual

Perform the element boundary assembly.

Reimplemented from libMesh::ElemAssembly.

Definition at line 169 of file assembly.h.

References libMesh::BoundaryInfo::boundary_ids(), libMesh::MeshBase::get_boundary_info(), libMesh::DiffContext::get_dof_indices(), libMesh::FEMContext::get_elem(), libMesh::DiffContext::get_elem_jacobian(), libMesh::System::get_mesh(), libMesh::FEMContext::get_side_fe(), libMesh::FEMContext::get_side_qrule(), libMesh::DiffContext::get_system(), libMesh::QBase::n_points(), and libMesh::FEMContext::side.

  {
    std::vector<boundary_id_type> bc_ids;
    c.get_system().get_mesh().get_boundary_info().boundary_ids (&c.get_elem(), c.side, bc_ids);
    for (const auto & bc_id : bc_ids)
      if (bc_id == 2 || bc_id == 4) // x == 0.2, x == -0.2
        {
          const unsigned int u_var = 0;

          FEBase * side_fe = nullptr;
          c.get_side_fe(u_var, side_fe);

          const std::vector<Real> & JxW_side = side_fe->get_JxW();

          const std::vector<std::vector<Real>> & phi_side = side_fe->get_phi();

          // The number of local degrees of freedom in each variable
          const unsigned int n_u_dofs = c.get_dof_indices(u_var).size();

          // Now we will build the affine operator
          unsigned int n_sidepoints = c.get_side_qrule().n_points();

          if (bc_id == 2)
            {
              for (unsigned int qp=0; qp != n_sidepoints; qp++)
                {
                  for (unsigned int i=0; i != n_u_dofs; i++)
                    for (unsigned int j=0; j != n_u_dofs; j++)
                      c.get_elem_jacobian()(i,j) += JxW_side[qp] * phi_side[j][qp]*phi_side[i][qp];
                }
            }

          if (bc_id == 4)
            {
              for (unsigned int qp=0; qp != n_sidepoints; qp++)
                {
                  for (unsigned int i=0; i != n_u_dofs; i++)
                    for (unsigned int j=0; j != n_u_dofs; j++)
                      c.get_elem_jacobian()(i,j) -= JxW_side[qp] * phi_side[j][qp]*phi_side[i][qp];
                }
            }
        }
  }

disable_print_counter_info() [1/2]

void libMesh::ReferenceCounter::disable_print_counter_info ( )

staticinherited

Definition at line 100 of file reference_counter.C.

References libMesh::ReferenceCounter::_enable_print_counter.

{
  _enable_print_counter = false;
  return;
}

disable_print_counter_info() [2/2]

void libMesh::ReferenceCounter::disable_print_counter_info ( )

staticinherited

Definition at line 100 of file reference_counter.C.

References libMesh::ReferenceCounter::_enable_print_counter.

{
  _enable_print_counter = false;
  return;
}

enable_print_counter_info() [1/2]

void libMesh::ReferenceCounter::enable_print_counter_info ( )

staticinherited

Methods to enable/disable the reference counter output from print_info()

Definition at line 94 of file reference_counter.C.

References libMesh::ReferenceCounter::_enable_print_counter.

{
  _enable_print_counter = true;
  return;
}

enable_print_counter_info() [2/2]

void libMesh::ReferenceCounter::enable_print_counter_info ( )

staticinherited

Methods to enable/disable the reference counter output from print_info()

Definition at line 94 of file reference_counter.C.

References libMesh::ReferenceCounter::_enable_print_counter.

{
  _enable_print_counter = true;
  return;
}

get_info() [1/2]

std::string libMesh::ReferenceCounter::get_info ( )

staticinherited

Gets a string containing the reference information.

Definition at line 47 of file reference_counter.C.

References libMesh::ReferenceCounter::_counts, and libMesh::Quality::name().

Referenced by libMesh::ReferenceCounter::print_info().

{
#if defined(LIBMESH_ENABLE_REFERENCE_COUNTING) && defined(DEBUG)

  std::ostringstream oss;

  oss << '\n'
      << " ---------------------------------------------------------------------------- \n"
      << "| Reference count information                                                |\n"
      << " ---------------------------------------------------------------------------- \n";

  for (const auto & [name, cd] : _counts)
    oss << "| " << name << " reference count information:\n"
        << "|  Creations:    " << cd.first    << '\n'
        << "|  Destructions: " << cd.second << '\n';

  oss << " ---------------------------------------------------------------------------- \n";

  return oss.str();

#else

  return "";

#endif
}

get_info() [2/2]

std::string libMesh::ReferenceCounter::get_info ( )

staticinherited

Gets a string containing the reference information.

Definition at line 47 of file reference_counter.C.

References libMesh::ReferenceCounter::_counts, and libMesh::Quality::name().

Referenced by libMesh::ReferenceCounter::print_info().

{
#if defined(LIBMESH_ENABLE_REFERENCE_COUNTING) && defined(DEBUG)

  std::ostringstream oss;

  oss << '\n'
      << " ---------------------------------------------------------------------------- \n"
      << "| Reference count information                                                |\n"
      << " ---------------------------------------------------------------------------- \n";

  for (const auto & [name, cd] : _counts)
    oss << "| " << name << " reference count information:\n"
        << "|  Creations:    " << cd.first    << '\n'
        << "|  Destructions: " << cd.second << '\n';

  oss << " ---------------------------------------------------------------------------- \n";

  return oss.str();

#else

  return "";

#endif
}

get_nodal_values()

virtual void libMesh::ElemAssembly::get_nodal_values ( std::vector< dof_id_type > &  , DenseMatrix< Number > &  , DenseVector< Number > &  , const System &  , const Node &    )

inlinevirtualinherited

Get values to add to the matrix or rhs vector based on node.

This allows one to impose point loads or springs, for example.

Definition at line 67 of file elem_assembly.h.

Referenced by libMesh::RBConstruction::add_scaled_matrix_and_vector().

  {
    // Do nothing by default
  }

increment_constructor_count() [1/2]

void libMesh::ReferenceCounter::increment_constructor_count ( const std::string &  name )

inlineprotectednoexceptinherited

Increments the construction counter.

Should be called in the constructor of any derived class that will be reference counted.

Definition at line 183 of file reference_counter.h.

References libMesh::err, libMesh::BasicOStreamProxy< charT, traits >::get(), libMesh::Quality::name(), and libMesh::Threads::spin_mtx.

Referenced by libMesh::ReferenceCountedObject< RBParametrized >::ReferenceCountedObject().

{
  libmesh_try
  {
    Threads::spin_mutex::scoped_lock lock(Threads::spin_mtx);
    std::pair<unsigned int, unsigned int> & p = _counts[name];
    p.first++;
  }
  libmesh_catch (...)
  {
    auto stream = libMesh::err.get();
    stream->exceptions(stream->goodbit); // stream must not throw
    libMesh::err << "Encountered unrecoverable error while calling "
                 << "ReferenceCounter::increment_constructor_count() "
                 << "for a(n) " << name << " object." << std::endl;
    std::terminate();
  }
}

increment_constructor_count() [2/2]

void libMesh::ReferenceCounter::increment_constructor_count ( const std::string &  name )

inlineprotectednoexceptinherited

Increments the construction counter.

Should be called in the constructor of any derived class that will be reference counted.

Definition at line 183 of file reference_counter.h.

References libMesh::err, libMesh::BasicOStreamProxy< charT, traits >::get(), libMesh::Quality::name(), and libMesh::Threads::spin_mtx.

Referenced by libMesh::ReferenceCountedObject< RBParametrized >::ReferenceCountedObject().

{
  libmesh_try
  {
    Threads::spin_mutex::scoped_lock lock(Threads::spin_mtx);
    std::pair<unsigned int, unsigned int> & p = _counts[name];
    p.first++;
  }
  libmesh_catch (...)
  {
    auto stream = libMesh::err.get();
    stream->exceptions(stream->goodbit); // stream must not throw
    libMesh::err << "Encountered unrecoverable error while calling "
                 << "ReferenceCounter::increment_constructor_count() "
                 << "for a(n) " << name << " object." << std::endl;
    std::terminate();
  }
}

increment_destructor_count() [1/2]

void libMesh::ReferenceCounter::increment_destructor_count ( const std::string &  name )

inlineprotectednoexceptinherited

Increments the destruction counter.

Should be called in the destructor of any derived class that will be reference counted.

Definition at line 207 of file reference_counter.h.

References libMesh::err, libMesh::BasicOStreamProxy< charT, traits >::get(), libMesh::Quality::name(), and libMesh::Threads::spin_mtx.

Referenced by libMesh::ReferenceCountedObject< RBParametrized >::~ReferenceCountedObject().

{
  libmesh_try
  {
    Threads::spin_mutex::scoped_lock lock(Threads::spin_mtx);
    std::pair<unsigned int, unsigned int> & p = _counts[name];
    p.second++;
  }
  libmesh_catch (...)
  {
    auto stream = libMesh::err.get();
    stream->exceptions(stream->goodbit); // stream must not throw
    libMesh::err << "Encountered unrecoverable error while calling "
                 << "ReferenceCounter::increment_destructor_count() "
                 << "for a(n) " << name << " object." << std::endl;
    std::terminate();
  }
}

increment_destructor_count() [2/2]

void libMesh::ReferenceCounter::increment_destructor_count ( const std::string &  name )

inlineprotectednoexceptinherited

Increments the destruction counter.

Should be called in the destructor of any derived class that will be reference counted.

Definition at line 207 of file reference_counter.h.

References libMesh::err, libMesh::BasicOStreamProxy< charT, traits >::get(), libMesh::Quality::name(), and libMesh::Threads::spin_mtx.

Referenced by libMesh::ReferenceCountedObject< RBParametrized >::~ReferenceCountedObject().

{
  libmesh_try
  {
    Threads::spin_mutex::scoped_lock lock(Threads::spin_mtx);
    std::pair<unsigned int, unsigned int> & p = _counts[name];
    p.second++;
  }
  libmesh_catch (...)
  {
    auto stream = libMesh::err.get();
    stream->exceptions(stream->goodbit); // stream must not throw
    libMesh::err << "Encountered unrecoverable error while calling "
                 << "ReferenceCounter::increment_destructor_count() "
                 << "for a(n) " << name << " object." << std::endl;
    std::terminate();
  }
}

interior_assembly()

void AssemblyA2::interior_assembly ( FEMContext &  )

virtual

Perform the element interior assembly.

Reimplemented from libMesh::ElemAssembly.

Definition at line 163 of file assembly.C.

References elasticity_tensor(), libMesh::DiffContext::get_dof_indices(), libMesh::DiffContext::get_elem_jacobian(), libMesh::FEMContext::get_element_fe(), libMesh::FEMContext::get_element_qrule(), libMesh::QBase::n_points(), libMesh::System::n_vars(), ElasticityAssembly::rb_sys, libMesh::Real, ElasticityRBConstruction::u_var, ElasticityRBConstruction::v_var, and ElasticityRBConstruction::w_var.

{
  const unsigned int n_components = rb_sys.n_vars();

  libmesh_assert_less_equal(n_components, 3);

  const unsigned int u_var = rb_sys.u_var;
  const unsigned int v_var = rb_sys.v_var;
  const unsigned int w_var = rb_sys.w_var;

  FEBase * elem_fe = nullptr;
  c.get_element_fe(u_var, elem_fe);

  const std::vector<Real> & JxW = elem_fe->get_JxW();

  // The velocity shape function gradients at interior
  // quadrature points.
  const std::vector<std::vector<RealGradient>> & dphi = elem_fe->get_dphi();

  // Now we will build the affine operator
  unsigned int n_qpoints = c.get_element_qrule().n_points();

  std::vector<unsigned int> n_var_dofs(n_components);
  n_var_dofs[u_var] = c.get_dof_indices(u_var).size();
  if (n_components > 1)
    n_var_dofs[v_var] = c.get_dof_indices(v_var).size();
  if (n_components > 2)
    n_var_dofs[w_var] = c.get_dof_indices(w_var).size();

  for (unsigned int C_i = 0; C_i < n_components; C_i++)
    {
      unsigned int C_j = 0;

      for (unsigned int C_k = 0; C_k < n_components; C_k++)
        {
          unsigned int C_l = 0;

          Real C_ijkl = elasticity_tensor(C_i,C_j,C_k,C_l);
          for (unsigned int qp=0; qp<n_qpoints; qp++)
            for (unsigned int i=0; i<n_var_dofs[C_i]; i++)
              for (unsigned int j=0; j<n_var_dofs[C_k]; j++)
                (c.get_elem_jacobian(C_i,C_k))(i,j) +=
                  JxW[qp]*(C_ijkl * dphi[i][qp](C_j)*dphi[j][qp](C_l));
        }
    }
}

n_objects() [1/2]

static unsigned int libMesh::ReferenceCounter::n_objects ( )

inlinestaticinherited

Prints the number of outstanding (created, but not yet destroyed) objects.

Definition at line 85 of file reference_counter.h.

References libMesh::ReferenceCounter::_n_objects.

Referenced by libMesh::LibMeshInit::~LibMeshInit().

  { return _n_objects; }

n_objects() [2/2]

static unsigned int libMesh::ReferenceCounter::n_objects ( )

inlinestaticinherited

Prints the number of outstanding (created, but not yet destroyed) objects.

Definition at line 85 of file reference_counter.h.

References libMesh::ReferenceCounter::_n_objects.

Referenced by libMesh::LibMeshInit::~LibMeshInit().

  { return _n_objects; }

print_info() [1/2]

void libMesh::ReferenceCounter::print_info ( std::ostream &  out_stream = libMesh::out )

staticinherited

Prints the reference information, by default to libMesh::out.

Definition at line 81 of file reference_counter.C.

References libMesh::ReferenceCounter::_enable_print_counter, and libMesh::ReferenceCounter::get_info().

Referenced by libMesh::LibMeshInit::~LibMeshInit().

{
  if (_enable_print_counter)
    out_stream << ReferenceCounter::get_info();
}

print_info() [2/2]

void libMesh::ReferenceCounter::print_info ( std::ostream &  out_stream = libMesh::out )

staticinherited

Prints the reference information, by default to libMesh::out.

Definition at line 81 of file reference_counter.C.

References libMesh::ReferenceCounter::_enable_print_counter, and libMesh::ReferenceCounter::get_info().

Referenced by libMesh::LibMeshInit::~LibMeshInit().

{
  if (_enable_print_counter)
    out_stream << ReferenceCounter::get_info();
}

Member Data Documentation

_counts [1/2]

ReferenceCounter::Counts libMesh::ReferenceCounter::_counts

staticprotectedinherited

Actually holds the data.

Definition at line 124 of file reference_counter.h.

Referenced by libMesh::ReferenceCounter::get_info().

_counts [2/2]

ReferenceCounter::Counts libMesh::ReferenceCounter::_counts

staticprotectedinherited

Actually holds the data.

Definition at line 124 of file reference_counter.h.

Referenced by libMesh::ReferenceCounter::get_info().

_enable_print_counter [1/2]

bool libMesh::ReferenceCounter::_enable_print_counter = true

staticprotectedinherited

Flag to control whether reference count information is printed when print_info is called.

Definition at line 143 of file reference_counter.h.

Referenced by libMesh::ReferenceCounter::disable_print_counter_info(), libMesh::ReferenceCounter::enable_print_counter_info(), and libMesh::ReferenceCounter::print_info().

_enable_print_counter [2/2]

bool libMesh::ReferenceCounter::_enable_print_counter = true

staticprotectedinherited

Flag to control whether reference count information is printed when print_info is called.

Definition at line 143 of file reference_counter.h.

Referenced by libMesh::ReferenceCounter::disable_print_counter_info(), libMesh::ReferenceCounter::enable_print_counter_info(), and libMesh::ReferenceCounter::print_info().

_mutex [1/2]

Threads::spin_mutex libMesh::ReferenceCounter::_mutex

staticprotectedinherited

Mutual exclusion object to enable thread-safe reference counting.

Definition at line 137 of file reference_counter.h.

_mutex [2/2]

Threads::spin_mutex libMesh::ReferenceCounter::_mutex

staticprotectedinherited

Mutual exclusion object to enable thread-safe reference counting.

Definition at line 137 of file reference_counter.h.

_n_objects [1/2]

Threads::atomic< unsigned int > libMesh::ReferenceCounter::_n_objects

staticprotectedinherited

The number of objects.

Print the reference count information when the number returns to 0.

Definition at line 132 of file reference_counter.h.

Referenced by libMesh::ReferenceCounter::n_objects(), libMesh::ReferenceCounter::ReferenceCounter(), and libMesh::ReferenceCounter::~ReferenceCounter().

_n_objects [2/2]

Threads::atomic< unsigned int > libMesh::ReferenceCounter::_n_objects

staticprotectedinherited

The number of objects.

Print the reference count information when the number returns to 0.

Definition at line 132 of file reference_counter.h.

Referenced by libMesh::ReferenceCounter::n_objects(), libMesh::ReferenceCounter::ReferenceCounter(), and libMesh::ReferenceCounter::~ReferenceCounter().

rb_sys

ElasticityRBConstruction& ElasticityAssembly::rb_sys

inherited

The ElasticityRBConstruction object that will use this assembly.

Definition at line 56 of file assembly.h.

Referenced by AssemblyF0::boundary_assembly(), AssemblyF1::boundary_assembly(), AssemblyF2::boundary_assembly(), AssemblyA0::interior_assembly(), AssemblyA1::interior_assembly(), interior_assembly(), and InnerProductAssembly::interior_assembly().

---

The documentation for this struct was generated from the following files:

• examples/reduced_basis/reduced_basis_ex5/assembly.h
• examples/reduced_basis/reduced_basis_ex5/assembly.C