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reduced_basis_ex3.C File Reference

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Functions

int main (int argc, char **argv)
 

Function Documentation

◆ main()

int main ( int  argc,
char **  argv 
)

Definition at line 54 of file reduced_basis_ex3.C.

55{
56 // Initialize libMesh.
57 LibMeshInit init (argc, argv);
58
59 // This example requires SLEPc
60#if !defined(LIBMESH_HAVE_SLEPC)
61 libmesh_example_requires(false, "--enable-slepc");
62#else
63
64#if !defined(LIBMESH_HAVE_XDR)
65 // We need XDR support to write out reduced bases
66 libmesh_example_requires(false, "--enable-xdr");
67#elif defined(LIBMESH_DEFAULT_SINGLE_PRECISION)
68 // XDR binary support requires double precision
69 libmesh_example_requires(false, "--disable-singleprecision");
70#endif
71 // FIXME: This example currently segfaults with Trilinos?
72 libmesh_example_requires(libMesh::default_solver_package() == PETSC_SOLVERS, "--enable-petsc");
73
74 // Skip this 2D example if libMesh was compiled as 1D-only.
75 libmesh_example_requires(2 <= LIBMESH_DIM, "2D support");
76
77#ifndef LIBMESH_ENABLE_DIRICHLET
78 libmesh_example_requires(false, "--enable-dirichlet");
79#else
80
81 // Parse the input file (reduced_basis_ex3.in) using GetPot
82 std::string parameters_filename = "reduced_basis_ex3.in";
83 GetPot infile(parameters_filename);
84
85 // But allow the command line to override it.
86 infile.parse_command_line(argc, argv);
87
88 unsigned int n_elem = infile("n_elem", 1); // Determines the number of elements in the "truth" mesh
89 const unsigned int dim = 2; // The number of spatial dimensions
90
91 bool store_basis_functions = infile("store_basis_functions", true); // Do we write the RB basis functions to disk?
92
93 // Read the "online_mode" flag from the command line
94 const int online_mode = libMesh::command_line_next("-online_mode", 0);
95
96 // Build a mesh on the default MPI communicator.
97 Mesh mesh (init.comm(), dim);
99 n_elem, n_elem,
100 0., 1.,
101 0., 1.,
102 QUAD4);
103
104 // Create an equation systems object.
105 EquationSystems equation_systems (mesh);
106
107 // We override RBConstruction with SimpleRBConstruction in order to
108 // specialize a few functions for this particular problem.
109 SimpleRBConstruction & rb_con =
110 equation_systems.add_system<SimpleRBConstruction> ("RBConvectionDiffusion");
111
112
113 // Initialize the data structures for the equation system.
114 equation_systems.init ();
115
116 // Print out some information about the "truth" discretization
117 equation_systems.print_info();
119
120 // Build a new RBEvaluation object which will be used to perform
121 // Reduced Basis calculations. This is required in both the
122 // "Offline" and "Online" stages.
123 SimpleRBEvaluation rb_eval(mesh.comm());
124
125 // Finally, we need to give the RBConstruction object a pointer to
126 // our RBEvaluation object
127 rb_con.set_rb_evaluation(rb_eval);
128
129 if (!online_mode) // Perform the Offline stage of the RB method
130 {
131 // Read in the data that defines this problem from the specified text file
132 rb_con.process_parameters_file(parameters_filename);
133
134 // Print out info that describes the current setup of rb_con
135 rb_con.print_info();
136
137 // Prepare rb_con for the Construction stage of the RB method.
138 // This sets up the necessary data structures and performs
139 // initial assembly of the "truth" affine expansion of the PDE.
141
142 // Compute the reduced basis space by computing "snapshots", i.e.
143 // "truth" solves, at well-chosen parameter values and employing
144 // these snapshots as basis functions.
145 rb_con.train_reduced_basis();
146
147 // Write out the data that will subsequently be required for the Evaluation stage
148#if defined(LIBMESH_HAVE_CAPNPROTO)
150 rb_eval_writer.write_to_file("trans_rb_eval.bin");
151#else
152 rb_eval.legacy_write_offline_data_to_files();
153#endif
154
155 // If requested, write out the RB basis functions for visualization purposes
156 if (store_basis_functions)
157 {
158 // Write out the basis functions
160 }
161 }
162 else // Perform the Online stage of the RB method
163 {
164 // Read in the reduced basis data
165#if defined(LIBMESH_HAVE_CAPNPROTO)
167 rb_eval_reader.read_from_file("trans_rb_eval.bin", /*read_error_bound_data*/ true);
168#else
169 rb_eval.legacy_read_offline_data_from_files();
170#endif
171
172 // Read in online_N and initialize online parameters
173 unsigned int online_N = infile("online_N", 1);
174 Real online_x_vel = infile("online_x_vel", 0.);
175 Real online_y_vel = infile("online_y_vel", 0.);
176 RBParameters online_mu;
177 online_mu.set_value("x_vel", online_x_vel);
178 online_mu.set_value("y_vel", online_y_vel);
179 rb_eval.set_parameters(online_mu);
180 rb_eval.print_parameters();
181
182 // Now do the Online solve using the precomputed reduced basis
183 Real error_bound_final_time = rb_eval.rb_solve(online_N);
184
185 libMesh::out << "Error bound (absolute) at the final time is "
186 << error_bound_final_time << std::endl << std::endl;
187
188 if (store_basis_functions)
189 {
190 // Read in the basis functions
191 rb_eval.read_in_basis_functions(rb_con);
192
193 // Plot the solution at the final time level
194 rb_con.pull_temporal_discretization_data(rb_eval);
195 rb_con.set_time_step(rb_con.get_n_time_steps());
196 rb_con.load_rb_solution();
197#ifdef LIBMESH_HAVE_EXODUS_API
198 ExodusII_IO(mesh).write_equation_systems ("RB_sol.e", equation_systems);
199#endif
200
201 // Plot the first basis function that was generated from the train_reduced_basis
202 // call in the Offline stage
203 rb_con.load_basis_function(0);
204#ifdef LIBMESH_HAVE_EXODUS_API
205 ExodusII_IO(mesh).write_equation_systems ("bf0.e", equation_systems);
206#endif
207 }
208 }
209
210#endif // LIBMESH_ENABLE_DIRICHLET
211
212 return 0;
213
214#endif // LIBMESH_HAVE_SLEPC
215}
unsigned int dim
This is the EquationSystems class.
The ExodusII_IO class implements reading meshes in the ExodusII file format from Sandia National Labs...
Definition exodusII_io.h:53
virtual void write_equation_systems(const std::string &fname, const EquationSystems &es, const std::set< std::string > *system_names=nullptr) override
Writes out the solution for no specific time or timestep.
The LibMeshInit class, when constructed, initializes the dependent libraries (e.g.
Definition libmesh.h:92
void print_info(std::ostream &os=libMesh::out, const unsigned int verbosity=0, const bool global=true) const
Prints relevant information about the mesh.
Definition mesh_base.C:1755
The Mesh class is a thin wrapper, around the ReplicatedMesh class by default.
Definition mesh.h:51
const Parallel::Communicator & comm() const
void set_rb_evaluation(RBEvaluation &rb_eval_in)
Set the RBEvaluation object.
virtual void print_info() const
Print out info that describes the current setup of this RBConstruction.
RBEvaluation & get_rb_evaluation()
Get a reference to the RBEvaluation object.
virtual void initialize_rb_construction(bool skip_matrix_assembly=false, bool skip_vector_assembly=false)
Allocate all the data structures necessary for the construction stage of the RB method.
virtual Real train_reduced_basis(const bool resize_rb_eval_data=true)
Train the reduced basis.
virtual void load_basis_function(unsigned int i)
Load the i^th RB function into the RBConstruction solution vector.
virtual void load_rb_solution()
Load the RB solution from the most recent solve with rb_eval into this system's solution vector.
virtual void process_parameters_file(const std::string &parameters_filename)
Read in from the file specified by parameters_filename and set the this system's member variables acc...
This class de-serializes a TransientRBEvaluation object using the Cap'n Proto library.
This class serializes a TransientRBEvaluation object using the Cap'n Proto library.
virtual void write_out_basis_functions(System &sys, const std::string &directory_name="offline_data", const bool write_binary_basis_functions=true)
Write out all the basis functions to file.
This class is part of the rbOOmit framework.
void set_value(const std::string &param_name, Real value)
Set the value of the specified parameter.
void init()
Initializes degrees of freedom on the current mesh.
Definition system.C:196
MeshBase & mesh
void build_square(UnstructuredMesh &mesh, const unsigned int nx, const unsigned int ny, const Real xmin=0., const Real xmax=1., const Real ymin=0., const Real ymax=1., const ElemType type=INVALID_ELEM, const bool gauss_lobatto_grid=false)
A specialized build_cube() for 2D meshes.
dof_id_type n_elem(const MeshBase::const_element_iterator &begin, const MeshBase::const_element_iterator &end)
Count up the number of elements of a specific type (as defined by an iterator range).
void init(triangulateio &t)
Initializes the fields of t to nullptr/0 as necessary.
SolverPackage default_solver_package()
Definition libmesh.C:1064
OStreamProxy out
T command_line_next(std::string name, T default_value)
Use GetPot's search()/next() functions to get following arguments from the command line.
Definition libmesh.C:1025
DIE A HORRIBLE DEATH HERE typedef LIBMESH_DEFAULT_SCALAR_TYPE Real

References libMesh::EquationSystems::add_system(), libMesh::MeshTools::Generation::build_square(), libMesh::ParallelObject::comm(), libMesh::command_line_next(), libMesh::default_solver_package(), dim, libMesh::RBConstruction::get_rb_evaluation(), libMesh::EquationSystems::init(), libMesh::RBConstruction::initialize_rb_construction(), libMesh::RBEvaluation::legacy_read_offline_data_from_files(), libMesh::RBEvaluation::legacy_write_offline_data_to_files(), libMesh::RBConstruction::load_basis_function(), libMesh::RBConstruction::load_rb_solution(), main(), mesh, libMesh::out, libMesh::PETSC_SOLVERS, libMesh::RBConstruction::print_info(), libMesh::EquationSystems::print_info(), libMesh::MeshBase::print_info(), libMesh::RBParametrized::print_parameters(), libMesh::RBConstruction::process_parameters_file(), libMesh::QUAD4, libMesh::RBEvaluation::rb_solve(), libMesh::RBDataDeserialization::TransientRBEvaluationDeserialization::read_from_file(), libMesh::RBEvaluation::read_in_basis_functions(), libMesh::Real, libMesh::RBParametrized::set_parameters(), libMesh::RBConstruction::set_rb_evaluation(), libMesh::RBParameters::set_value(), libMesh::RBConstruction::train_reduced_basis(), libMesh::ExodusII_IO::write_equation_systems(), libMesh::RBEvaluation::write_out_basis_functions(), and libMesh::RBDataSerialization::TransientRBEvaluationSerialization::write_to_file().