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Classes | Functions
miscellaneous_ex3.C File Reference

Go to the source code of this file.

Classes

class  LaplaceYoung
 A class which provides the residual and jacobian assembly functions for the Laplace-Young system of equations. More...
 

Functions

int main (int argc, char **argv)
 

Function Documentation

◆ main()

int main ( int  argc,
char **  argv 
)

Definition at line 135 of file miscellaneous_ex3.C.

136{
137 // Initialize libMesh and any dependent libraries, like in example 2.
138 LibMeshInit init (argc, argv);
139
140 // This example requires a NonlinearSolver.
141#if !defined(LIBMESH_HAVE_PETSC) && (!defined(LIBMESH_TRILINOS_HAVE_NOX) || !defined(LIBMESH_TRILINOS_HAVE_EPETRA))
142 libmesh_example_requires(false, "--enable-petsc or --enable-trilinos");
143#endif
144
145 if (libMesh::on_command_line ("--use-eigen"))
146 {
147 libMesh::err << "This example requires a NonlinearSolver, and therefore does not "
148 << "support --use-eigen on the command line."
149 << std::endl;
150 return 0;
151 }
152
153#ifndef LIBMESH_ENABLE_AMR
154 libmesh_example_requires(false, "--enable-amr");
155#else
156
157 // Create a GetPot object to parse the command line
158 GetPot command_line (argc, argv);
159
160 // Check for proper calling arguments.
161 libmesh_error_msg_if(argc < 3, "Usage:\n" << "\t " << argv[0] << " -r 2");
162
163 // Brief message to the user regarding the program name
164 // and command line arguments.
165 libMesh::out << "Running " << argv[0];
166
167 for (int i=1; i<argc; i++)
168 libMesh::out << " " << argv[i];
169
170 libMesh::out << std::endl << std::endl;
171
172 // Read number of refinements
173 const int nr = libMesh::command_line_next("-r", 2);
174
175 // Read FE order from command line
176 std::string order = "FIRST";
177 order = libMesh::command_line_next("-o", order);
178 order = libMesh::command_line_next("-Order", order);
179
180 // Read FE Family from command line
181 std::string family = "LAGRANGE";
182 family = libMesh::command_line_next("-f", family);
183 family = libMesh::command_line_next("-FEFamily", family);
184
185 // Cannot use discontinuous basis.
186 libmesh_error_msg_if((family == "MONOMIAL") || (family == "XYZ"),
187 "This example requires a C^0 (or higher) FE basis.");
188
189 if (libMesh::on_command_line("-pre"))
190 {
191#ifdef LIBMESH_HAVE_PETSC
192 //Use the jacobian for preconditioning.
193# if PETSC_VERSION_LESS_THAN(3,7,0)
194 LibmeshPetscCall2(init.comm(), PetscOptionsSetValue("-snes_mf_operator",
195 LIBMESH_PETSC_NULLPTR));
196# else
197 LibmeshPetscCall2(init.comm(), PetscOptionsSetValue(LIBMESH_PETSC_NULLPTR, "-snes_mf_operator",
198 LIBMESH_PETSC_NULLPTR));
199# endif
200#else
201 libMesh::err << "Must be using PETSc to use jacobian based preconditioning" << std::endl;
202
203 //returning zero so that "make run" won't fail if we ever enable this capability there.
204 return 0;
205#endif //LIBMESH_HAVE_PETSC
206 }
207
208 // Skip this 2D example if libMesh was compiled as 1D-only.
209 libmesh_example_requires(2 <= LIBMESH_DIM, "2D support");
210
211 // Create a mesh, with dimension to be overridden by the file,
212 // distributed across the default MPI communicator.
213 Mesh mesh(init.comm());
214
215 mesh.read ("lshaped.xda");
216
217 if (order != "FIRST")
219
221
222 // Print information about the mesh to the screen.
224
225 // Create an equation systems object.
226 EquationSystems equation_systems (mesh);
227
228 // Declare the system and its variables.
229
230 // Creates a system named "Laplace-Young"
231 NonlinearImplicitSystem & system =
232 equation_systems.add_system<NonlinearImplicitSystem> ("Laplace-Young");
233
234 // Here we specify the tolerance for the nonlinear solver and
235 // the maximum of nonlinear iterations.
236 equation_systems.parameters.set<Real> ("nonlinear solver tolerance") = 1.e-12;
237 equation_systems.parameters.set<unsigned int> ("nonlinear solver maximum iterations") = 50;
238
239
240 // Adds the variable "u" to "Laplace-Young". "u"
241 // will be approximated using second-order approximation.
242 system.add_variable("u",
243 Utility::string_to_enum<Order> (order),
244 Utility::string_to_enum<FEFamily>(family));
245
246 // Construct object which provides the residual and jacobian
247 // computations and tell the solver to use it.
248 LaplaceYoung laplace_young;
249 system.nonlinear_solver->residual_object = &laplace_young;
250 system.nonlinear_solver->jacobian_object = &laplace_young;
251 system.nonlinear_solver->postcheck_object = &laplace_young;
252
253 // Initialize the data structures for the equation system.
254 equation_systems.init();
255
256 // Prints information about the system to the screen.
257 equation_systems.print_info();
258
259 // Solve the system "Laplace-Young", print the number of iterations
260 // and final residual
261 equation_systems.get_system("Laplace-Young").solve();
262
263 // Print out final convergence information. This duplicates some
264 // output from during the solve itself, but demonstrates another way
265 // to get this information after the solve is complete.
266 libMesh::out << "Laplace-Young system solved at nonlinear iteration "
267 << system.n_nonlinear_iterations()
268 << " , final nonlinear residual norm: "
269 << system.final_nonlinear_residual()
270 << std::endl;
271
272#ifdef LIBMESH_HAVE_EXODUS_API
273 // After solving the system write the solution
275 equation_systems);
276#endif // #ifdef LIBMESH_HAVE_EXODUS_API
277#endif // #ifndef LIBMESH_ENABLE_AMR
278
279 // All done.
280 return 0;
281}
A class which provides the residual and jacobian assembly functions for the Laplace-Young system of e...
This is the EquationSystems class.
The ExodusII_IO class implements reading meshes in the ExodusII file format from Sandia National Labs...
Definition exodusII_io.h:53
virtual void write_equation_systems(const std::string &fname, const EquationSystems &es, const std::set< std::string > *system_names=nullptr) override
Writes out the solution for no specific time or timestep.
The LibMeshInit class, when constructed, initializes the dependent libraries (e.g.
Definition libmesh.h:92
void all_second_order(const bool full_ordered=true)
Calls the range-based version of this function with a range consisting of all elements in the mesh.
Definition mesh_base.C:1803
virtual void read(const std::string &name, void *mesh_data=nullptr, bool skip_renumber_nodes_and_elements=false, bool skip_find_neighbors=false, bool skip_detect_interior_parents=false)=0
Interfaces for reading/writing a mesh to/from a file.
void print_info(std::ostream &os=libMesh::out, const unsigned int verbosity=0, const bool global=true) const
Prints relevant information about the mesh.
Definition mesh_base.C:1755
Implements (adaptive) mesh refinement algorithms for a MeshBase.
void uniformly_refine(unsigned int n=1)
Uniformly refines the mesh n times.
The Mesh class is a thin wrapper, around the ReplicatedMesh class by default.
Definition mesh.h:51
Manages consistently variables, degrees of freedom, coefficient vectors, matrices and non-linear solv...
std::unique_ptr< NonlinearSolver< Number > > nonlinear_solver
The NonlinearSolver defines the default interface used to solve the nonlinear_implicit system.
T & set(const std::string &)
Definition parameters.h:494
unsigned int add_variable(std::string_view var, const FEType &type, const std::set< subdomain_id_type > *const active_subdomains=nullptr)
Adds the variable var to the list of variables for this system.
Definition system.C:1344
Parameters parameters
Parameters for the system. If a parameter is not provided, it should be retrieved from the EquationSy...
Definition system.h:1588
MeshBase & mesh
void init(triangulateio &t)
Initializes the fields of t to nullptr/0 as necessary.
OStreamProxy err
OStreamProxy out
T command_line_next(std::string name, T default_value)
Use GetPot's search()/next() functions to get following arguments from the command line.
Definition libmesh.C:1025
bool on_command_line(std::string arg)
Definition libmesh.C:934
DIE A HORRIBLE DEATH HERE typedef LIBMESH_DEFAULT_SCALAR_TYPE Real

References libMesh::EquationSystems::add_system(), libMesh::System::add_variable(), libMesh::MeshBase::all_second_order(), libMesh::command_line_next(), libMesh::err, libMesh::NonlinearImplicitSystem::final_nonlinear_residual(), libMesh::EquationSystems::get_system(), libMesh::EquationSystems::init(), main(), mesh, libMesh::NonlinearImplicitSystem::n_nonlinear_iterations(), libMesh::NonlinearImplicitSystem::nonlinear_solver, libMesh::on_command_line(), libMesh::out, libMesh::EquationSystems::parameters, libMesh::EquationSystems::print_info(), libMesh::MeshBase::print_info(), libMesh::MeshBase::read(), libMesh::Real, libMesh::Parameters::set(), libMesh::MeshRefinement::uniformly_refine(), and libMesh::ExodusII_IO::write_equation_systems().