libMesh
eigen_sparse_matrix.h
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1 // The libMesh Finite Element Library.
2 // Copyright (C) 2002-2025 Benjamin S. Kirk, John W. Peterson, Roy H. Stogner
3 
4 // This library is free software; you can redistribute it and/or
5 // modify it under the terms of the GNU Lesser General Public
6 // License as published by the Free Software Foundation; either
7 // version 2.1 of the License, or (at your option) any later version.
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12 // Lesser General Public License for more details.
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18 
19 
20 #ifndef LIBMESH_EIGEN_SPARSE_MATRIX_H
21 #define LIBMESH_EIGEN_SPARSE_MATRIX_H
22 
23 #include "libmesh/libmesh_config.h"
24 
25 #ifdef LIBMESH_HAVE_EIGEN
26 
27 // Local includes
28 #include "libmesh/sparse_matrix.h"
29 #include "libmesh/eigen_core_support.h"
30 
31 // Eigen includes
32 
33 // C++ includes
34 #include <algorithm>
35 #include <cstddef>
36 
37 namespace libMesh
38 {
39 
40 // Forward declarations
41 template <typename T> class DenseMatrix;
42 template <typename T> class EigenSparseVector;
43 template <typename T> class EigenSparseLinearSolver;
44 
53 template <typename T>
54 class EigenSparseMatrix final : public SparseMatrix<T>
55 {
56 
57 public:
69 
74  EigenSparseMatrix (EigenSparseMatrix &&) = default;
75  EigenSparseMatrix (const EigenSparseMatrix &) = default;
76  EigenSparseMatrix & operator= (const EigenSparseMatrix &) = default;
78  virtual ~EigenSparseMatrix () = default;
79 
80  virtual SolverPackage solver_package() override
81  {
82  return EIGEN_SOLVERS;
83  }
84 
85  virtual SparseMatrix<T> & operator=(const SparseMatrix<T> & v) override
86  {
87  *this = cast_ref<const EigenSparseMatrix<T> &>(v);
88  return *this;
89  }
90 
94  typedef EigenSM DataType;
95  typedef Eigen::Triplet<T,eigen_idx_type> TripletType;
96 
97  virtual void init (const numeric_index_type m,
98  const numeric_index_type n,
99  const numeric_index_type m_l,
100  const numeric_index_type n_l,
101  const numeric_index_type nnz=30,
102  const numeric_index_type noz=10,
103  const numeric_index_type blocksize=1) override;
104 
105  virtual void init (ParallelType = PARALLEL) override;
106 
107  virtual void clear () override;
108 
109  virtual void zero () override;
110 
111  virtual std::unique_ptr<SparseMatrix<T>> zero_clone () const override;
112 
113  virtual std::unique_ptr<SparseMatrix<T>> clone () const override;
114 
115  virtual void close () override { this->_closed = true; }
116 
117  virtual numeric_index_type m () const override;
118 
119  virtual numeric_index_type n () const override;
120 
121  virtual numeric_index_type row_start () const override;
122 
123  virtual numeric_index_type row_stop () const override;
124 
125  virtual numeric_index_type col_start () const override;
126 
127  virtual numeric_index_type col_stop () const override;
128 
129  virtual void set (const numeric_index_type i,
130  const numeric_index_type j,
131  const T value) override;
132 
133  virtual void add (const numeric_index_type i,
134  const numeric_index_type j,
135  const T value) override;
136 
137  virtual void add_matrix (const DenseMatrix<T> & dm,
138  const std::vector<numeric_index_type> & rows,
139  const std::vector<numeric_index_type> & cols) override;
140 
141  virtual void add_matrix (const DenseMatrix<T> & dm,
142  const std::vector<numeric_index_type> & dof_indices) override;
143 
144  virtual void add (const T a, const SparseMatrix<T> & X) override;
145 
146  virtual T operator () (const numeric_index_type i,
147  const numeric_index_type j) const override;
148 
149  virtual Real l1_norm () const override;
150 
151  virtual Real linfty_norm () const override;
152 
153  virtual bool closed() const override { return _closed; }
154 
155  virtual void print_personal(std::ostream & os=libMesh::out) const override { this->print(os); }
156 
157  virtual void get_diagonal (NumericVector<T> & dest) const override;
158 
159  virtual void get_transpose (SparseMatrix<T> & dest) const override;
160 
161  virtual void get_row(numeric_index_type i,
162  std::vector<numeric_index_type> & indices,
163  std::vector<T> & values) const override;
164 private:
165 
170 
174  bool _closed;
175 
179  friend class EigenSparseVector<T>;
180  friend class EigenSparseLinearSolver<T>;
181 };
182 
183 } // namespace libMesh
184 
185 #endif // #ifdef LIBMESH_HAVE_EIGEN
186 #endif // #ifdef LIBMESH_EIGEN_SPARSE_MATRIX_H
The EigenSparseMatrix class wraps a sparse matrix object from the Eigen library.
virtual void init(const numeric_index_type m, const numeric_index_type n, const numeric_index_type m_l, const numeric_index_type n_l, const numeric_index_type nnz=30, const numeric_index_type noz=10, const numeric_index_type blocksize=1) override
Initialize SparseMatrix with the specified sizes.
virtual void add(const numeric_index_type i, const numeric_index_type j, const T value) override
Add value to the element (i,j).
virtual numeric_index_type m() const override
virtual void close() override
Calls the SparseMatrix&#39;s internal assembly routines, ensuring that the values are consistent across p...
Eigen::Triplet< T, eigen_idx_type > TripletType
virtual numeric_index_type row_stop() const override
bool _closed
Flag indicating if the matrix has been closed yet.
virtual std::unique_ptr< SparseMatrix< T > > clone() const override
This class provides an interface to Eigen iterative solvers that is compatible with the libMesh Linea...
Provides a uniform interface to vector storage schemes for different linear algebra libraries...
Definition: vector_fe_ex5.C:44
const Parallel::Communicator & comm() const
EigenSparseMatrix & operator=(const EigenSparseMatrix &)=default
virtual ~EigenSparseMatrix()=default
The libMesh namespace provides an interface to certain functionality in the library.
DataType _mat
Actual Eigen::SparseMatrix<> we are wrapping.
virtual void get_transpose(SparseMatrix< T > &dest) const override
Copies the transpose of the matrix into dest, which may be *this.
Generic sparse matrix.
Definition: vector_fe_ex5.C:46
virtual void zero() override
Set all entries to 0.
virtual numeric_index_type n() const override
virtual bool closed() const override
virtual void get_diagonal(NumericVector< T > &dest) const override
Copies the diagonal part of the matrix into dest.
dof_id_type numeric_index_type
Definition: id_types.h:99
EigenSparseMatrix(const Parallel::Communicator &comm)
Constructor; initializes the matrix to be empty, without any structure, i.e.
Eigen::SparseMatrix< Number, Eigen::RowMajor, eigen_idx_type > EigenSM
virtual SparseMatrix< T > & operator=(const SparseMatrix< T > &v) override
This looks like a copy assignment operator, but note that, unlike normal copy assignment operators...
virtual numeric_index_type col_stop() const override
virtual T operator()(const numeric_index_type i, const numeric_index_type j) const override
EigenSM DataType
Convenient typedefs.
virtual numeric_index_type row_start() const override
virtual void print_personal(std::ostream &os=libMesh::out) const override
Print the contents of the matrix to the screen in a package-personalized style, if available...
DIE A HORRIBLE DEATH HERE typedef LIBMESH_DEFAULT_SCALAR_TYPE Real
virtual Real linfty_norm() const override
virtual numeric_index_type col_start() const override
OStreamProxy out
virtual void clear() override
Restores the SparseMatrix<T> to a pristine state.
static const bool value
Definition: xdr_io.C:54
virtual void get_row(numeric_index_type i, std::vector< numeric_index_type > &indices, std::vector< T > &values) const override
Get a row from the matrix.
virtual SolverPackage solver_package() override
virtual std::unique_ptr< SparseMatrix< T > > zero_clone() const override
virtual Real l1_norm() const override
SolverPackage
Defines an enum for various linear solver packages.
Defines a dense matrix for use in Finite Element-type computations.
Definition: dof_map.h:75
void print(std::ostream &os=libMesh::out, const bool sparse=false) const
Print the contents of the matrix to the screen in a uniform style, regardless of matrix/solver packag...
This class provides a nice interface to the Eigen C++-based data structures for serial vectors...
ParallelType
Defines an enum for parallel data structure types.
virtual void add_matrix(const DenseMatrix< T > &dm, const std::vector< numeric_index_type > &rows, const std::vector< numeric_index_type > &cols) override
Add the full matrix dm to the SparseMatrix.