DOFMapOutput Class Reference

An output object for writing the DOF map of the system in a machine parsable format. More...

#include <DOFMapOutput.h>

Inheritance diagram for DOFMapOutput:

Public Member Functions
	DOFMapOutput (const InputParameters &parameters)
virtual std::string	filename () override
	Creates the output file name Appends the user-supplied 'file_base' input parameter with a '.txt' extension. More...
void	output (const ExecFlagType &type) override
	Write the DOF mapt. More...
void	setFileNumber (unsigned int num)
	Sets the file number manually. More...
unsigned int	getFileNumber ()
	Return the current file number for this outputter. More...
virtual Real	time () override
	Get the output time. More...
virtual Real	timeOld ()
	Get the old output time. More...
virtual Real	dt ()
	Get the current time step size. More...
virtual Real	dtOld ()
	Get old time step size. More...
virtual int	timeStep ()
	Get the current time step. More...
const unsigned int &	interval () const
	Get the output interval. More...
const MultiMooseEnum &	executeOn () const
	Get the current 'execute_on' selections for display. More...
bool	isAdvanced ()
	Returns true if this object is an AdvancedOutput object. More...
virtual const OutputOnWarehouse &	advancedExecuteOn () const
	Returns the advanced 'execute_on' settings. More...
void	allowOutput (bool state)
	Method for controlling the allow output state. More...
virtual void	outputStep (const ExecFlagType &type)
	A single call to this function should output all the necessary data for a single timestep. More...
const std::string &	type () const
	Get the type of this object. More...
virtual const std::string &	name () const
	Get the name of the object. More...
const InputParameters &	parameters () const
	Get the parameters of the object. More...
template<typename T >
const T &	getParamTempl (const std::string &name) const
	Retrieve a parameter for the object. More...
template<typename T >
T	getCheckedPointerParam (const std::string &name, const std::string &error_string="") const
	Verifies that the requested parameter exists and is not NULL and returns it to the caller. More...
bool	isParamValid (const std::string &name) const
	Test if the supplied parameter is valid. More...
MooseApp &	getMooseApp () const
	Get the MooseApp this object is associated with. More...
virtual bool	enabled () const
	Return the enabled status of the object. More...
template<typename... Args>
void	paramError (const std::string &param, Args... args) const
	Emits an error prefixed with the file and line number of the given param (from the input file) along with the full parameter path+name followed by the given args as the message. More...
template<typename... Args>
void	paramWarning (const std::string &param, Args... args) const
	Emits a warning prefixed with the file and line number of the given param (from the input file) along with the full parameter path+name followed by the given args as the message. More...
template<typename... Args>
void	paramInfo (const std::string &param, Args... args) const
	Emits an informational message prefixed with the file and line number of the given param (from the input file) along with the full parameter path+name followed by the given args as the message. More...
template<typename... Args>
void	mooseError (Args &&... args) const
template<typename... Args>
void	mooseWarning (Args &&... args) const
template<typename... Args>
void	mooseDeprecated (Args &&... args) const
template<typename... Args>
void	mooseInfo (Args &&... args) const
virtual void	meshChanged ()
	Called on this object when the mesh changes. More...
virtual void	timestepSetup ()
	Gets called at the beginning of the timestep before this object is asked to do its job. More...
virtual void	jacobianSetup ()
	Gets called just before the Jacobian is computed and before this object is asked to do its job. More...
virtual void	residualSetup ()
	Gets called just before the residual is computed and before this object is asked to do its job. More...
virtual void	subdomainSetup ()
	Gets called when the subdomain changes (i.e. More...
const ExecFlagEnum &	getExecuteOnEnum () const
	Return the execute on MultiMooseEnum for this object. More...
virtual const std::vector< ExecFlagType > &	execFlags () const
	(DEPRECATED) Get the execution flag for the object TODO: ExecFlagType More...
ExecFlagType	execBitFlags () const
	(DEPRECATED) Build and return the execution flags as a bitfield TODO: ExecFlagType More...

Static Public Member Functions
static InputParameters	validParams ()
static ExecFlagEnum	getDefaultExecFlagEnum ()
	Return an ExecFlagEnum object with the available execution flags for Output objects. More...
static void	addDeprecatedInputParameters (InputParameters &params)
	A static helper for injecting deprecated parameters. More...
static ExecFlagEnum	getExecuteOptions ()
	(DEPRECATED) Returns the available options for the 'execute_on' input parameters TODO: ExecFlagType More...

Public Attributes
const ConsoleStream	_console
	An instance of helper class to write streams to the Console objects. More...

Protected Member Functions
template<typename T >
std::string	join (const T &begin, const T &end, const char *const delim)
	A helper method for joining items with a delimeter. More...
void	writeStreamToFile (bool append=true)
	Write the file stream to the file. More...
std::string	demangle (const std::string &name)
	Try to demangle type name. More...
virtual bool	shouldOutput (const ExecFlagType &type) override
	Checks if the output method should be executed. More...
bool	checkFilename ()
	Checks the filename for output Checks the output against the 'output_if_base_contians' list. More...
virtual bool	onInterval ()
	Returns true if the output interval is satisfied. More...
virtual void	initialSetup ()
	Initialization method. More...
template<typename T >
T &	declareRestartableDataTempl (const std::string &data_name)
	Declare a piece of data as "restartable". More...
template<typename T >
T &	declareRestartableDataTempl (const std::string &data_name, const T &init_value)
	Declare a piece of data as "restartable" and initialize it. More...
template<typename T >
T &	declareRestartableDataWithContext (const std::string &data_name, void *context)
	Declare a piece of data as "restartable". More...
template<typename T >
T &	declareRestartableDataWithContext (const std::string &data_name, const T &init_value, void *context)
	Declare a piece of data as "restartable" and initialize it. More...
template<typename T >
T &	declareRestartableDataWithPrefixOverrideAndContext (const std::string &data_name, const std::string &prefix, void *context)
	Declare a piece of data as "restartable". More...
template<typename T >
T &	declareRecoverableData (const std::string &data_name)
	Declare a piece of data as "recoverable". More...
template<typename T >
T &	declareRecoverableData (const std::string &data_name, const T &init_value)
	Declare a piece of data as "restartable" and initialize it. More...
template<typename T >
T &	declareRestartableDataWithObjectName (const std::string &data_name, const std::string &object_name)
	Declare a piece of data as "restartable". More...
template<typename T >
T &	declareRestartableDataWithObjectNameWithContext (const std::string &data_name, const std::string &object_name, void *context)
	Declare a piece of data as "restartable". More...
PerfID	registerTimedSection (const std::string &section_name, const unsigned int level)
	Call to register a named section for timing. More...

Protected Attributes
bool	_write_file
	Flag for controlling outputting console information to a file. More...
bool	_write_screen
	Flag for controlling outputting console information to screen. More...
std::stringstream	_file_output_stream
	Stream for storing information to be written to a file. More...
std::string	_system_name
	The name of the system to extract DOF information. More...
MooseMesh &	_mesh
	Reference to the mesh object. More...
std::string	_file_base
	The base filename from the input paramaters. More...
unsigned int &	_file_num
	A file number counter, initialized to 0 (this must be controlled by the child class, see Exodus) More...
unsigned int	_padding
	Number of digits to pad the extensions. More...
std::vector< std::string >	_output_if_base_contains
	Storage for 'output_if_base_contains'. More...
Real	_norm
	Current norm returned from PETSc. More...
PetscInt	_nonlinear_iter
	Current non-linear iteration returned from PETSc. More...
PetscInt	_linear_iter
	Current linear iteration returned from PETSc. More...
FEProblemBase *	_problem_ptr
	Pointer the the FEProblemBase object for output object (use this) More...
bool	_transient
	Transient flag (true = transient) More...
bool	_use_displaced
	Flag for using displaced mesh. More...
EquationSystems *	_es_ptr
	Reference the the libMesh::EquationSystems object that contains the data. More...
MooseMesh *	_mesh_ptr
	A convenience pointer to the current mesh (reference or displaced depending on "use_displaced") More...
bool	_sequence
	Flag for forcing call to outputSetup() with every call to output() (restartable) More...
ExecFlagEnum	_execute_on
	The common Execution types; this is used as the default execution type for everything except system information and input. More...
Real &	_time
	The current time for output purposes. More...
Real &	_time_old
	The old time. More...
int &	_t_step
	The current time step. More...
Real &	_dt
	Time step delta. More...
Real &	_dt_old
	Old time step delta. More...
unsigned int	_num
	The number of outputs written. More...
const unsigned int	_interval
	The output time step interval. More...
std::set< Real >	_sync_times
	Sync times for this outputter. More...
Real	_start_time
	Start outputting time. More...
Real	_end_time
	End outputting time. More...
int	_start_step
	Start outputting at this time step. More...
int	_end_step
	End outputting at this time step. More...
Real	_t_tol
	Time checking tolerance. More...
bool	_sync_only
	Flag for only executing at sync times. More...
bool	_initialized
	True if init() has been called. More...
bool	_allow_output
	Flag for disabling output. More...
bool	_is_advanced
	Flag for advanced output testing. More...
OutputOnWarehouse	_advanced_execute_on
	Storage for the individual component execute flags. More...
PerfID	_output_step_timer
	Timers. More...
const InputParameters &	_pars
	Parameters of this object, references the InputParameters stored in the InputParametersWarehouse. More...
MooseApp &	_app
	The MooseApp this object is associated with. More...
const std::string &	_type
	The type of this object (the Class name) More...
const std::string &	_name
	The name of this object, reference to value stored in InputParameters. More...
const bool &	_enabled
	Reference to the "enable" InputParaemters, used by Controls for toggling on/off MooseObjects. More...
FEProblemBase &	_mci_feproblem
	Reference to FEProblemBase instance. More...
const ExecFlagEnum &	_execute_enum
	Execute settings for this oejct. More...
const std::vector< ExecFlagType >	_exec_flags
	(DEPRECATED) execution flag (when is the object executed/evaluated) TODO: ExecFlagType More...
const ExecFlagType &	_current_execute_flag
	Reference to FEProblemBase. More...
const InputParameters *	_pg_params
	Params. More...
PerfGraph &	_perf_graph
	The performance graph to add to. More...
std::string	_prefix
	A prefix to use for all sections. More...

Private Member Functions
void	solveSetup () override
	Internal setup function that executes at the beginning of the time step. More...
template<typename... Args>
std::string	paramErrorMsg (const std::string &param, Args... args) const
RestartableDataValue &	registerRestartableDataOnApp (const std::string &name, std::unique_ptr< RestartableDataValue > data, THREAD_ID tid)
	Helper function for actually registering the restartable data. More...
void	registerRestartableNameWithFilterOnApp (const std::string &name, Moose::RESTARTABLE_FILTER filter)
	Helper function for actually registering the restartable data. More...

Static Private Member Functions
static PetscErrorCode	petscNonlinearOutput (SNES, PetscInt its, PetscReal fnorm, void *void_ptr)
	Performs the output on non-linear iterations. More...
static PetscErrorCode	petscLinearOutput (KSP, PetscInt its, PetscReal fnorm, void *void_ptr)
	Performs the output onlinear iterations. More...

Private Attributes
Real	_nonlinear_time
	The psuedo non-linear time. More...
Real	_nonlinear_dt
	The pseuedo non-linear time step. More...
Real	_linear_time
	Psuedo linear time. More...
Real	_linear_dt
	Psuedo linear time step. More...
bool	_on_linear_residual
	True if current output calls is on the linear residual (used by time()) More...
bool	_on_nonlinear_residual
	True if current output call is on the non-linear residual (used by time()) More...
Real	_nonlinear_dt_divisor
	Pseudo non-linear timestep divisor. More...
Real	_linear_dt_divisor
	Pseudo linear timestep divisor. More...
Real	_nonlinear_start_time
	Non-linear residual output start time. More...
Real	_linear_start_time
	Linear residual output start time. More...
Real	_nonlinear_end_time
	Non-linear residual output end time. More...
Real	_linear_end_time
	Linear residual output end time. More...
MooseApp &	_restartable_app
	Reference to the application. More...
std::string	_restartable_name
	The name of the object. More...
std::string	_restartable_system_name
	The system name this object is in. More...
THREAD_ID	_restartable_tid
	The thread ID for this object. More...
ExecFlagEnum	_empty_execute_enum
	Empty ExecFlagEnum for the case when the "execute_on" parameter is not included. More...

Detailed Description

An output object for writing the DOF map of the system in a machine parsable format.

Definition at line 25 of file DOFMapOutput.h.

Constructor & Destructor Documentation

DOFMapOutput()

DOFMapOutput::DOFMapOutput

(

const InputParameters &

parameters

)

Definition at line 48 of file DOFMapOutput.C.

  : FileOutput(parameters),
    _write_file(getParam<bool>("output_file")),
    _write_screen(getParam<bool>("output_screen")),
    _system_name(getParam<std::string>("system_name")),
    _mesh(_problem_ptr->mesh())
{
}

Member Function Documentation

addDeprecatedInputParameters()

static void Output::addDeprecatedInputParameters ( InputParameters &  params )

staticinherited

A static helper for injecting deprecated parameters.

advancedExecuteOn()

const OutputOnWarehouse & Output::advancedExecuteOn ( ) const

virtualinherited

Returns the advanced 'execute_on' settings.

Check if this is valid first with isAdvanced()

Reimplemented in AdvancedOutput.

Definition at line 281 of file Output.C.

{
  mooseError("The output object ", name(), " is not an AdvancedOutput, use isAdvanced() to check.");
  return _advanced_execute_on;
}

allowOutput()

void Output::allowOutput ( bool  state )

inlineinherited

Method for controlling the allow output state.

Parameters

state

The state to set the allow flag to

Definition at line 123 of file Output.h.

{ _allow_output = state; }

checkFilename()

bool FileOutput::checkFilename ( )

protectedinherited

Checks the filename for output Checks the output against the 'output_if_base_contians' list.

Returns

Returns true if the filename is valid for output

Definition at line 113 of file FileOutput.C.

{
  // Return true if 'output_if_base_contains' is not utilized
  if (_output_if_base_contains.empty())
    return true;
 
  // Assumed output is false
  bool output = false;
 
  // Loop through each string in the list
  for (const auto & search_string : _output_if_base_contains)
  {
    // Search for the string in the file base, if found set the output to true and break the loop
    if (_file_base.find(search_string) != std::string::npos)
    {
      output = true;
      break;
    }
  }
 
  // Return the value
  return output;
}

Referenced by FileOutput::shouldOutput(), and AdvancedOutput::shouldOutput().

declareRecoverableData() [1/2]

template<typename T >

T & Restartable::declareRecoverableData ( const std::string &  data_name )

protectedinherited

Declare a piece of data as "recoverable".

This means that in the event of a recovery this piece of data will be restored back to its previous value.

Note - this data will NOT be restored on Restart!

NOTE: This returns a reference! Make sure you store it in a reference!

Parameters

data_name

The name of the data (usually just use the same name as the member variable)

Definition at line 295 of file Restartable.h.

{
  std::string full_name = _restartable_system_name + "/" + _restartable_name + "/" + data_name;
 
  registerRestartableNameWithFilterOnApp(full_name, Moose::RESTARTABLE_FILTER::RECOVERABLE);
 
  return declareRestartableDataWithContext<T>(data_name, nullptr);
}

declareRecoverableData() [2/2]

template<typename T >

T & Restartable::declareRecoverableData ( const std::string &  data_name, const T &  init_value  )

protectedinherited

Declare a piece of data as "restartable" and initialize it.

This means that in the event of a restart this piece of data will be restored back to its previous value.

Note - this data will NOT be restored on Restart!

NOTE: This returns a reference! Make sure you store it in a reference!

Parameters

data_name	The name of the data (usually just use the same name as the member variable)
init_value	The initial value of the data

Definition at line 306 of file Restartable.h.

{
  std::string full_name = _restartable_system_name + "/" + _restartable_name + "/" + data_name;
 
  registerRestartableNameWithFilterOnApp(full_name, Moose::RESTARTABLE_FILTER::RECOVERABLE);
 
  return declareRestartableDataWithContext<T>(data_name, init_value, nullptr);
}

declareRestartableDataTempl() [1/2]

template<typename T >

T & Restartable::declareRestartableDataTempl ( const std::string &  data_name )

protectedinherited

Declare a piece of data as "restartable".

This means that in the event of a restart this piece of data will be restored back to its previous value.

NOTE: This returns a reference! Make sure you store it in a reference!

Parameters

data_name

The name of the data (usually just use the same name as the member variable)

Definition at line 222 of file Restartable.h.

{
  return declareRestartableDataWithContext<T>(data_name, nullptr);
}

declareRestartableDataTempl() [2/2]

template<typename T >

T & Restartable::declareRestartableDataTempl ( const std::string &  data_name, const T &  init_value  )

protectedinherited

Declare a piece of data as "restartable" and initialize it.

This means that in the event of a restart this piece of data will be restored back to its previous value.

NOTE: This returns a reference! Make sure you store it in a reference!

Parameters

data_name	The name of the data (usually just use the same name as the member variable)
init_value	The initial value of the data

Definition at line 229 of file Restartable.h.

{
  return declareRestartableDataWithContext<T>(data_name, init_value, nullptr);
}

declareRestartableDataWithContext() [1/2]

template<typename T >

T & Restartable::declareRestartableDataWithContext ( const std::string &  data_name, const T &  init_value, void *  context  )

protectedinherited

Declare a piece of data as "restartable" and initialize it.

This means that in the event of a restart this piece of data will be restored back to its previous value.

NOTE: This returns a reference! Make sure you store it in a reference!

Parameters

data_name	The name of the data (usually just use the same name as the member variable)
init_value	The initial value of the data
context	Context pointer that will be passed to the load and store functions

Definition at line 250 of file Restartable.h.

{
  std::string full_name = _restartable_system_name + "/" + _restartable_name + "/" + data_name;
 
  // Here we will create the RestartableData even though we may not use this instance.
  // If it's already in use, the App will return a reference to the existing instance and we'll
  // return that one instead. We might refactor this to have the app create the RestartableData
  // at a later date.
  auto data_ptr = libmesh_make_unique<RestartableData<T>>(full_name, context);
  auto & restartable_data_ref = static_cast<RestartableData<T> &>(
      registerRestartableDataOnApp(full_name, std::move(data_ptr), _restartable_tid));
 
  restartable_data_ref.set() = init_value;
  return restartable_data_ref.get();
}

declareRestartableDataWithContext() [2/2]

template<typename T >

T & Restartable::declareRestartableDataWithContext ( const std::string &  data_name, void *  context  )

protectedinherited

Declare a piece of data as "restartable".

This means that in the event of a restart this piece of data will be restored back to its previous value.

NOTE: This returns a reference! Make sure you store it in a reference!

Parameters

data_name	The name of the data (usually just use the same name as the member variable)
context	Context pointer that will be passed to the load and store functions

Definition at line 236 of file Restartable.h.

{
  std::string full_name = _restartable_system_name + "/" + _restartable_name + "/" + data_name;
  auto data_ptr = libmesh_make_unique<RestartableData<T>>(full_name, context);
 
  // See comment in overloaded version of this function with "init_value"
  auto & restartable_data_ref = static_cast<RestartableData<T> &>(
      registerRestartableDataOnApp(full_name, std::move(data_ptr), _restartable_tid));
 
  return restartable_data_ref.get();
}

declareRestartableDataWithObjectName()

template<typename T >

T & Restartable::declareRestartableDataWithObjectName ( const std::string &  data_name, const std::string &  object_name  )

protectedinherited

Declare a piece of data as "restartable".

This means that in the event of a restart this piece of data will be restored back to its previous value.

NOTE: This returns a reference! Make sure you store it in a reference!

Parameters

data_name	The name of the data (usually just use the same name as the member variable)
object_name	A supplied name for the object that is declaring this data.

Definition at line 270 of file Restartable.h.

{
  return declareRestartableDataWithObjectNameWithContext<T>(data_name, object_name, nullptr);
}

declareRestartableDataWithObjectNameWithContext()

template<typename T >

T & Restartable::declareRestartableDataWithObjectNameWithContext ( const std::string &  data_name, const std::string &  object_name, void *  context  )

protectedinherited

Declare a piece of data as "restartable".

This means that in the event of a restart this piece of data will be restored back to its previous value.

NOTE: This returns a reference! Make sure you store it in a reference!

Parameters

data_name	The name of the data (usually just use the same name as the member variable)
object_name	A supplied name for the object that is declaring this data.
context	Context pointer that will be passed to the load and store functions

Definition at line 278 of file Restartable.h.

{
  std::string old_name = _restartable_name;
 
  _restartable_name = object_name;
 
  T & value = declareRestartableDataWithContext<T>(data_name, context);
 
  _restartable_name = old_name;
 
  return value;
}

declareRestartableDataWithPrefixOverrideAndContext()

template<typename T >

T& Restartable::declareRestartableDataWithPrefixOverrideAndContext ( const std::string &  data_name, const std::string &  prefix, void *  context  )

protectedinherited

Declare a piece of data as "restartable".

This means that in the event of a restart this piece of data will be restored back to its previous value.

NOTE: This returns a reference! Make sure you store it in a reference!

Parameters

data_name	The name of the data (usually just use the same name as the member variable)
prefix	The prefix to prepend to the data_name, to retrieve data from another object.
context	Context pointer that will be passed to the load and store functions

demangle()

std::string DOFMapOutput::demangle ( const std::string &  name )

protected

Try to demangle type name.

Definition at line 67 of file DOFMapOutput.C.

{
#if defined(LIBMESH_HAVE_GCC_ABI_DEMANGLE)
  return libMesh::demangle(name.c_str());
#else
  // at least remove leading digits
  std::string demangled(name);
  while (demangled.length() && demangled[0] >= '0' && demangled[0] <= '9')
    demangled.erase(0, 1);
 
  return demangled;
#endif
}

Referenced by output().

dt()

Real Output::dt ( )

virtualinherited

Get the current time step size.

Definition at line 245 of file Output.C.

{
  if (_transient)
    return _dt;
  else
    return 1;
}

Referenced by Console::writeTimestepInformation().

dtOld()

Real Output::dtOld ( )

virtualinherited

Get old time step size.

Definition at line 254 of file Output.C.

{
  if (_transient)
    return _dt_old;
  else
    return 1;
}

enabled()

virtual bool MooseObject::enabled ( ) const

inlinevirtualinherited

Return the enabled status of the object.

Reimplemented in EigenKernel.

Definition at line 110 of file MooseObject.h.

{ return _enabled; }

Referenced by EigenKernel::enabled().

execBitFlags()

ExecFlagType SetupInterface::execBitFlags ( ) const

inherited

(DEPRECATED) Build and return the execution flags as a bitfield TODO: ExecFlagType

Definition at line 87 of file SetupInterface.C.

{
  // TODO: ExecFlagType
  mooseDeprecated("The execBitFlags method is being removed because MOOSE was updated to use a "
                  "ExecFlagEnum for execute flags. This method maintains the behavior of the "
                  "original method but the use of this method should be removed from your "
                  "application. The ExecFlagEnum should be inspected directly via the "
                  "getExecuteOnEnum() method.");
 
  unsigned int exec_bit_field = EXEC_NONE;
  for (const auto & flag : _exec_flags)
    exec_bit_field |= flag.id();
  return ExecFlagType("deprecated", exec_bit_field);
}

execFlags()

const std::vector< ExecFlagType > & SetupInterface::execFlags ( ) const

virtualinherited

(DEPRECATED) Get the execution flag for the object TODO: ExecFlagType

Reimplemented in MultiAppTransfer.

Definition at line 75 of file SetupInterface.C.

{
  // TODO: ExecFlagType
  mooseDeprecated("The execFlags() method is being removed because MOOSE has been updated to use a "
                  "ExecFlagEnum for execute flags. The current flags should be retrieved from "
                  "the \"exeucte_on\" parameters of your object or by using the \"_execute_enum\" "
                  "reference to the parameter or the getExecuteOnEnum() method.");
 
  return _exec_flags;
}

executeOn()

const MultiMooseEnum & Output::executeOn ( ) const

inherited

Get the current 'execute_on' selections for display.

Definition at line 269 of file Output.C.

{
  return _execute_on;
}

filename()

std::string DOFMapOutput::filename ( )

overridevirtual

Creates the output file name Appends the user-supplied 'file_base' input parameter with a '.txt' extension.

Returns

A string containing the output filename

Reimplemented from FileOutput.

Definition at line 58 of file DOFMapOutput.C.

{
  if (_file_num > 0)
    return _file_base + "_" + Moose::stringify(_file_num) + ".json";
  else
    return _file_base + ".json";
}

Referenced by writeStreamToFile().

getCheckedPointerParam()

template<typename T >

T MooseObject::getCheckedPointerParam ( const std::string &  name, const std::string &  error_string = ""  ) const

inlineinherited

Verifies that the requested parameter exists and is not NULL and returns it to the caller.

The template parameter must be a pointer or an error will be thrown.

Definition at line 91 of file MooseObject.h.

  {
    return parameters().getCheckedPointerParam<T>(name, error_string);
  }

getDefaultExecFlagEnum()

ExecFlagEnum Output::getDefaultExecFlagEnum ( )

staticinherited

Return an ExecFlagEnum object with the available execution flags for Output objects.

Definition at line 79 of file Output.C.

{
  ExecFlagEnum exec_enum = MooseUtils::getDefaultExecFlagEnum();
  exec_enum.addAvailableFlags(EXEC_FAILED);
  return exec_enum;
}

Referenced by CommonOutputAction::validParams(), and Output::validParams().

getExecuteOnEnum()

const ExecFlagEnum & SetupInterface::getExecuteOnEnum ( ) const

inherited

Return the execute on MultiMooseEnum for this object.

Definition at line 69 of file SetupInterface.C.

{
  return _execute_enum;
}

Referenced by ChangeOverTimePostprocessor::ChangeOverTimePostprocessor(), and MultiAppTransfer::checkMultiAppExecuteOn().

getExecuteOptions()

ExecFlagEnum SetupInterface::getExecuteOptions ( )

staticinherited

(DEPRECATED) Returns the available options for the 'execute_on' input parameters TODO: ExecFlagType

Returns

A MooseEnum with the available 'execute_on' options, the default is 'residual'

Definition at line 103 of file SetupInterface.C.

{
  // TODO: ExecFlagType
  ::mooseDeprecated("The 'getExecuteOptions' was replaced by the ExecFlagEnum class because MOOSE "
                    "was updated to use this for the execute flags and the new function provides "
                    "additional arguments for modification of the enum.");
  return MooseUtils::getDefaultExecFlagEnum();
}

getFileNumber()

unsigned int FileOutput::getFileNumber ( )

inherited

Return the current file number for this outputter.

This method was implemented for the MultiApp system, particularly when reseting an application and a new output file is desired after the reset.

Definition at line 150 of file FileOutput.C.

{
  return _file_num;
}

Referenced by OutputWarehouse::getFileNumbers().

getMooseApp()

MooseApp& MooseObject::getMooseApp ( ) const

inlineinherited

Get the MooseApp this object is associated with.

Definition at line 105 of file MooseObject.h.

{ return _app; }

Referenced by MortarData::createMortarInterface(), Executioner::Executioner(), and ConsoleUtils::outputMeshInformation().

getParamTempl()

template<typename T >

const T & MooseObject::getParamTempl ( const std::string &  name ) const

inherited

Retrieve a parameter for the object.

Parameters

name	The name of the parameter

Returns

The value of the parameter

Definition at line 208 of file MooseObject.h.

{
  return InputParameters::getParamHelper(name, _pars, static_cast<T *>(0));
}

Referenced by FEProblemBase::addMaterialHelper(), ConstraintWarehouse::addObject(), EigenKernel::EigenKernel(), AttribThread::initFrom(), BlockRestrictable::initializeBlockRestrictable(), BoundaryRestrictable::initializeBoundaryRestrictable(), Console::initialSetup(), ConsoleUtils::outputExecutionInformation(), and TimePeriod::TimePeriod().

initialSetup()

void Output::initialSetup ( )

protectedvirtualinherited

Initialization method.

This populates the various data structures needed to control the output

Reimplemented from SetupInterface.

Reimplemented in Exodus, CSV, OversampleOutput, Nemesis, Console, and AdvancedOutput.

Definition at line 156 of file Output.C.

{
  _initialized = true;
}

interval()

const unsigned int& Output::interval ( ) const

inherited

Get the output interval.

isAdvanced()

bool Output::isAdvanced ( )

inherited

Returns true if this object is an AdvancedOutput object.

Definition at line 275 of file Output.C.

{
  return _is_advanced;
}

isParamValid()

bool MooseObject::isParamValid ( const std::string &  name ) const

inlineinherited

Test if the supplied parameter is valid.

Parameters

name	The name of the parameter to test

Definition at line 100 of file MooseObject.h.

{ return _pars.isParamValid(name); }

Referenced by AdvancedOutput::AdvancedOutput(), BicubicSplineFunction::BicubicSplineFunction(), GeneratedMesh::buildMesh(), DistributedGeneratedMesh::buildMesh(), CartesianMeshGenerator::CartesianMeshGenerator(), LibmeshPartitioner::clone(), OversampleOutput::cloneMesh(), ConstantVectorPostprocessor::ConstantVectorPostprocessor(), CSVReader::CSVReader(), DGKernelBase::DGKernelBase(), MultiAppNearestNodeTransfer::execute(), Executioner::Executioner(), Exodus::Exodus(), FEProblemBase::FEProblemBase(), FileOutput::FileOutput(), MultiApp::fillPositions(), FunctionDT::FunctionDT(), ExtraNodesetGenerator::generate(), RenameBoundaryGenerator::generate(), RenameBlockGenerator::generate(), BreakBoundaryOnSubdomainGenerator::generate(), ElementSubdomainIDGenerator::generate(), LowerDBlockFromSidesetGenerator::generate(), MeshSideSetGenerator::generate(), GeneratedMeshGenerator::generate(), ParsedSubdomainMeshGenerator::generate(), MeshExtruderGenerator::generate(), SubdomainBoundingBoxGenerator::generate(), MultiAppNearestNodeTransfer::getLocalEntities(), MultiAppNearestNodeTransfer::getLocalEntitiesAndComponents(), MeshGenerator::getMesh(), MultiAppNearestNodeTransfer::getNearestNode(), EigenExecutionerBase::init(), IterationAdaptiveDT::init(), AdvancedOutput::initExecutionTypes(), BlockRestrictable::initializeBlockRestrictable(), BoundaryRestrictable::initializeBoundaryRestrictable(), SolutionScalarAux::initialSetup(), SolutionAux::initialSetup(), MooseParsedVectorFunction::initialSetup(), Console::initialSetup(), Receiver::initialSetup(), SolutionFunction::initialSetup(), MooseParsedGradFunction::initialSetup(), MooseParsedFunction::initialSetup(), AdvancedOutput::initialSetup(), AdvancedOutput::initPostprocessorOrVectorPostprocessorLists(), IterationAdaptiveDT::IterationAdaptiveDT(), LeastSquaresFit::LeastSquaresFit(), LibmeshPartitioner::LibmeshPartitioner(), MatDiffusionBase< Real >::MatDiffusionBase(), MeshGeneratorMesh::MeshGeneratorMesh(), BreakBoundaryOnSubdomain::modify(), MeshExtruder::modify(), MeshSideSet::modify(), LowerDBlockFromSideset::modify(), AssignElementSubdomainID::modify(), ParsedSubdomainMeshModifier::modify(), RenameBlock::modify(), SubdomainBoundingBox::modify(), MooseMesh::MooseMesh(), EigenExecutionerBase::normalizeSolution(), Output::Output(), PetscOutput::PetscOutput(), PiecewiseBase::PiecewiseBase(), SolutionUserObject::readExodusII(), RenameBlock::RenameBlock(), RenameBlockGenerator::RenameBlockGenerator(), RenameBoundaryGenerator::RenameBoundaryGenerator(), SolutionUserObject::SolutionUserObject(), and TimePeriod::TimePeriod().

jacobianSetup()

void SetupInterface::jacobianSetup ( )

virtualinherited

Gets called just before the Jacobian is computed and before this object is asked to do its job.

Reimplemented in EqualValueEmbeddedConstraint.

Definition at line 54 of file SetupInterface.C.

{
}

join()

template<typename T >

std::string DOFMapOutput::join ( const T &  begin, const T &  end, const char *const  delim  )

protected

A helper method for joining items with a delimeter.

Parameters

begin	Beginning iterator
end	Ending iterator
delim	The delimiter character to insert

Definition at line 102 of file DOFMapOutput.C.

{
  std::ostringstream os;
  for (T it = begin; it != end; ++it)
    os << (it != begin ? delim : "") << *it;
  return os.str();
}

Referenced by output().

meshChanged()

virtual void MeshChangedInterface::meshChanged ( )

inlinevirtualinherited

Called on this object when the mesh changes.

Reimplemented in DiracKernel, Console, Exodus, Nemesis, OversampleOutput, GhostingUserObject, ExplicitTimeIntegrator, EqualValueBoundaryConstraint, and GeometryBase.

Definition at line 39 of file MeshChangedInterface.h.

{}

mooseDeprecated()

template<typename... Args>

void MooseObject::mooseDeprecated ( Args &&...  args ) const

inlineinherited

Definition at line 156 of file MooseObject.h.

  {
    moose::internal::mooseDeprecatedStream(_console, false, std::forward<Args>(args)...);
  }

Referenced by FEProblemBase::addArrayVariable(), FEProblemBase::addAuxArrayVariable(), FEProblemBase::addAuxScalarVariable(), FEProblemBase::addAuxVariable(), FEProblemBase::addScalarVariable(), FEProblemBase::addVariable(), ADFunctionPresetBC< compute_stage >::ADFunctionPresetBC(), ADPresetBC< compute_stage >::ADPresetBC(), ADPresetNodalBC< compute_stage >::ADPresetNodalBC(), FEProblemBase::advanceMultiApps(), MultiApp::appProblem(), MooseMesh::buildSideList(), ChangeOverTimestepPostprocessor::ChangeOverTimestepPostprocessor(), FEProblemBase::computeResidual(), MaterialBase::declarePropertyOlderTempl(), MaterialBase::declarePropertyOldTempl(), MooseMesh::elem(), MultiAppTransfer::execFlags(), UserForcingFunction::f(), FaceFaceConstraint< compute_stage >::FaceFaceConstraint(), FunctionDT::FunctionDT(), FunctionPresetBC::FunctionPresetBC(), RandomICBase::generateRandom(), Control::getExecuteOptions(), FEProblemBase::getNonlinearSystem(), Sampler::getSamples(), FEProblemBase::getUserObjects(), FEProblemBase::getVectorPostprocessorValue(), FEProblemBase::getVectorPostprocessorValueOld(), MatDiffusionBase< Real >::MatDiffusionBase(), NodalScalarKernel::NodalScalarKernel(), MooseMesh::node(), PercentChangePostprocessor::PercentChangePostprocessor(), PresetBC::PresetBC(), PresetNodalBC::PresetNodalBC(), Sampler::rand(), ReferenceResidualProblem::ReferenceResidualProblem(), MooseMesh::setBoundaryToNormalMap(), Exodus::setOutputDimension(), and UserForcingFunction::UserForcingFunction().

mooseError()

template<typename... Args>

void MooseObject::mooseError ( Args &&...  args ) const

inlineinherited

Definition at line 141 of file MooseObject.h.

  {
    std::ostringstream oss;
    moose::internal::mooseStreamAll(oss, std::forward<Args>(args)...);
    std::string msg = oss.str();
    callMooseErrorRaw(msg, &_app);
  }

Referenced by GridPartitioner::_do_partition(), PetscExternalPartitioner::_do_partition(), FEProblemBase::addConstraint(), ADDGKernel< compute_stage >::ADDGKernel(), FEProblemBase::addInitialCondition(), FEProblem::addLineSearch(), FEProblemBase::addLineSearch(), FEProblemBase::addOutput(), DiracKernel::addPointWithValidId(), FEProblemBase::addPostprocessor(), MooseMesh::addQuadratureNode(), FEProblemBase::addVectorPostprocessor(), MultiAppConservativeTransfer::adjustTransferedSolution(), MultiAppConservativeTransfer::adjustTransferedSolutionNearestPoint(), ADKernelTempl< T, compute_stage >::ADKernelTempl(), ADPiecewiseLinearInterpolationMaterial< compute_stage >::ADPiecewiseLinearInterpolationMaterial(), Output::advancedExecuteOn(), MooseVariableBase::allDofIndices(), MultiApp::appPostprocessorValue(), MultiApp::appProblem(), MultiApp::appProblemBase(), MultiApp::appUserObjectBase(), ArrayConstantIC::ArrayConstantIC(), ArrayDGKernel::ArrayDGKernel(), ArrayDiffusion::ArrayDiffusion(), ArrayFunctionIC::ArrayFunctionIC(), ArrayReaction::ArrayReaction(), ArrayTimeDerivative::ArrayTimeDerivative(), Function::average(), Axisymmetric2D3DSolutionFunction::Axisymmetric2D3DSolutionFunction(), BicubicSplineFunction::BicubicSplineFunction(), BoundingValueElementDamper::BoundingValueElementDamper(), BoundingValueNodalDamper::BoundingValueNodalDamper(), BoundsAux::BoundsAux(), BreakMeshByBlockGenerator::BreakMeshByBlockGenerator(), BreakMeshByBlockGeneratorBase::BreakMeshByBlockGeneratorBase(), MooseMesh::buildCoarseningMap(), PiecewiseBase::buildFromFile(), PiecewiseBase::buildFromXY(), PiecewiseLinearBase::buildInterpolation(), TiledMesh::buildMesh(), FileMesh::buildMesh(), DistributedGeneratedMesh::buildMesh(), GeneratedMesh::buildMesh(), SpiralAnnularMesh::buildMesh(), ImageMeshGenerator::buildMesh3D(), ImageMesh::buildMesh3D(), MooseMesh::buildMeshBaseObject(), MooseMesh::buildRefinementMap(), MooseMesh::buildSideList(), CartesianMeshGenerator::CartesianMeshGenerator(), ChangeOverTimePostprocessor::ChangeOverTimePostprocessor(), EigenExecutionerBase::chebyshev(), SubProblem::checkBlockMatProps(), SubProblem::checkBoundaryMatProps(), FEProblemBase::checkCoordinateSystems(), FEProblemBase::checkDependMaterialsHelper(), FEProblemBase::checkDisplacementOrders(), MaterialBase::checkExecutionStage(), BreakMeshByBlockBase::checkInputParameter(), Steady::checkIntegrity(), EigenExecutionerBase::checkIntegrity(), ExplicitTimeIntegrator::checkLinearConvergence(), FEProblemBase::checkProblemIntegrity(), MaterialBase::checkStatefulSanity(), FEProblemBase::checkUserObjects(), MultiAppTransfer::checkVariable(), LibmeshPartitioner::clone(), MooseMesh::clone(), ComparisonPostprocessor::comparisonIsTrue(), CompositeFunction::CompositeFunction(), ElementLpNormAux::compute(), ElementH1ErrorFunctionAux::compute(), NodalPatchRecovery::compute(), KernelBase::computeADOffDiagJacobian(), BlockWeightedPartitioner::computeElementWeight(), ArrayDGKernel::computeElemNeighJacobian(), ArrayDGKernel::computeElemNeighResidual(), TimeSequenceStepperBase::computeFailedDT(), IterationAdaptiveDT::computeFailedDT(), TimeStepper::computeFailedDT(), HistogramVectorPostprocessor::computeHistogram(), ArrayKernel::computeJacobian(), ArrayIntegratedBC::computeJacobian(), ArrayIntegratedBC::computeJacobianBlock(), ArrayDGKernel::computeOffDiagElemNeighJacobian(), ArrayKernel::computeOffDiagJacobian(), MaterialBase::computeProperties(), CoupledTiedValueConstraint::computeQpJacobian(), TiedValueConstraint::computeQpJacobian(), LinearNodalConstraint::computeQpJacobian(), EqualValueBoundaryConstraint::computeQpJacobian(), EqualValueEmbeddedConstraint::computeQpJacobian(), CoupledTiedValueConstraint::computeQpOffDiagJacobian(), EqualValueEmbeddedConstraint::computeQpOffDiagJacobian(), KernelValue::computeQpResidual(), ArrayKernel::computeResidual(), ArrayIntegratedBC::computeResidual(), FEProblemBase::computeResidualInternal(), FEProblemBase::computeResidualTag(), FEProblemBase::computeResidualType(), StatisticsVectorPostprocessor::computeStatValue(), MaterialBase::computeSubdomainProperties(), ActuallyExplicitEuler::computeTimeDerivatives(), ExplicitEuler::computeTimeDerivatives(), ImplicitEuler::computeTimeDerivatives(), BDF2::computeTimeDerivatives(), NewmarkBeta::computeTimeDerivatives(), CrankNicolson::computeTimeDerivatives(), LStableDirk2::computeTimeDerivatives(), LStableDirk3::computeTimeDerivatives(), ImplicitMidpoint::computeTimeDerivatives(), ExplicitTVDRK2::computeTimeDerivatives(), AStableDirk4::computeTimeDerivatives(), LStableDirk4::computeTimeDerivatives(), ExplicitRK2::computeTimeDerivatives(), PenetrationAux::computeValue(), ConcentricCircleMesh::ConcentricCircleMesh(), ConditionalEnableControl::ConditionalEnableControl(), TimeStepper::constrainStep(), CoupledForce::CoupledForce(), CoupledForceNodalKernel::CoupledForceNodalKernel(), SidesetInfoVectorPostprocessor::dataHelper(), DebugResidualAux::DebugResidualAux(), FunctorRelationshipManager::delete_remote_elements(), BicubicSplineFunction::derivative(), DerivativeSumMaterial::DerivativeSumMaterial(), DGKernel::DGKernel(), FunctorRelationshipManager::dofmap_reinit(), FEProblemBase::duplicateVariableCheck(), EigenProblem::EigenProblem(), Eigenvalues::Eigenvalues(), ElementalVariableValue::ElementalVariableValue(), ElementIntegerAux::ElementIntegerAux(), ElementQualityAux::ElementQualityAux(), MooseMesh::errorIfDistributedMesh(), SolutionUserObject::evalMeshFunction(), SolutionUserObject::evalMeshFunctionGradient(), SolutionUserObject::evalMultiValuedMeshFunction(), SolutionUserObject::evalMultiValuedMeshFunctionGradient(), MultiAppPostprocessorTransfer::execute(), DiscreteElementUserObject::execute(), MultiAppPostprocessorInterpolationTransfer::execute(), MultiAppVariableValueSamplePostprocessorTransfer::execute(), ElementQualityChecker::execute(), NodalValueSampler::execute(), GreaterThanLessThanPostprocessor::execute(), MultiAppInterpolationTransfer::execute(), MultiAppUserObjectTransfer::execute(), InterfaceQpValueUserObject::execute(), PointValue::execute(), MultiAppPostprocessorToAuxScalarTransfer::execute(), MultiAppScalarToAuxScalarTransfer::execute(), MultiAppVariableValueSampleTransfer::execute(), FindValueOnLine::execute(), MultiAppNearestNodeTransfer::execute(), TimeExtremeValue::execute(), VectorPostprocessorComparison::execute(), LeastSquaresFit::execute(), LeastSquaresFitHistory::execute(), FEProblemBase::executeControls(), MultiAppVectorPostprocessorTransfer::executeFromMultiapp(), MultiAppVectorPostprocessorTransfer::executeToMultiapp(), Exodus::Exodus(), ExplicitSSPRungeKutta::ExplicitSSPRungeKutta(), FileOutput::FileOutput(), CentroidMultiApp::fillPositions(), MultiApp::fillPositions(), VerifyElementUniqueID::finalize(), VerifyNodalUniqueID::finalize(), DiscreteElementUserObject::finalize(), ElementQualityChecker::finalize(), MemoryUsage::finalize(), PointSamplerBase::finalize(), NearestPointIntegralVariablePostprocessor::finalize(), Transfer::find_sys(), BreakMeshByBlockBase::findFreeBoundaryId(), BreakMeshByBlockGeneratorBase::findFreeBoundaryId(), FunctionDT::FunctionDT(), FunctionMaterialBase::FunctionMaterialBase(), ParsedMaterialHelper::functionParse(), FunctionScalarAux::FunctionScalarAux(), FunctionScalarIC::FunctionScalarIC(), GapValueAux::GapValueAux(), WorkBalance::gather(), ExtraNodesetGenerator::generate(), RenameBoundaryGenerator::generate(), RenameBlockGenerator::generate(), ElementSubdomainIDGenerator::generate(), GeneratedMeshGenerator::generate(), CombinerGenerator::generate(), SideSetsFromBoundingBoxGenerator::generate(), MeshExtruderGenerator::generate(), StackGenerator::generate(), SpiralAnnularMeshGenerator::generate(), PatternedMeshGenerator::generate(), SubdomainBoundingBoxGenerator::generate(), BoundingBoxNodeSetGenerator::generate(), GeneratedMesh::GeneratedMesh(), GeneratedMeshGenerator::GeneratedMeshGenerator(), RandomICBase::generateRandom(), GenericConstantMaterial::GenericConstantMaterial(), GenericFunctionMaterial::GenericFunctionMaterial(), DisplacedProblem::getArrayVariable(), FEProblemBase::getArrayVariable(), MooseMesh::getBoundaryID(), MultiApp::getBoundingBox(), MooseMesh::getCoarseningMap(), Control::getControllableParameterByName(), FEProblemBase::getCoordSystem(), PiecewiseConstant::getDirection(), FEProblemBase::getDistribution(), GhostingUserObject::getElementalValue(), ElementGenerator::getElemType(), MultiApp::getExecutioner(), FEProblemBase::getFunction(), SolutionUserObject::getLocalVarIndex(), SubProblem::getMatrixTagID(), AnnularMesh::getMaxInDimension(), DistributedGeneratedMesh::getMaxInDimension(), GeneratedMesh::getMaxInDimension(), FEProblemBase::getMaxQps(), FEProblemBase::getMaxShapeFunctions(), AnnularMesh::getMinInDimension(), DistributedGeneratedMesh::getMinInDimension(), GeneratedMesh::getMinInDimension(), MooseMesh::getNodeBlockIds(), MooseMesh::getNodeList(), FEProblemBase::getNonlinearSystem(), MooseMesh::getPairedBoundaryMapping(), ImageMesh::GetPixelInfo(), ImageMeshGenerator::GetPixelInfo(), InterfaceQpValueUserObject::getQpValue(), MaterialStdVectorAux::getRealValue(), MooseMesh::getRefinementMap(), FEProblemBase::getSampler(), DisplacedProblem::getScalarVariable(), FEProblemBase::getScalarVariable(), DisplacedProblem::getStandardVariable(), FEProblemBase::getStandardVariable(), MooseMesh::getSubdomainBoundaryIds(), MooseMesh::getSubdomainID(), DisplacedProblem::getSystem(), FEProblemBase::getSystem(), FEProblemBase::getUserObjectBase(), FEProblemBase::getUserObjectTempl(), NumRelationshipManagers::getValue(), PerformanceData::getValue(), Residual::getValue(), PerfGraphData::getValue(), LineValueSampler::getValue(), FindValueOnLine::getValueAtPoint(), SubProblem::getVariableHelper(), SubProblem::getVectorTagID(), DisplacedProblem::getVectorVariable(), FEProblemBase::getVectorVariable(), GhostingAux::GhostingAux(), MultiApp::globalAppToLocal(), MooseParsedVectorFunction::gradient(), AdvancedOutput::hasOutputHelper(), CrankNicolson::init(), CSVTimeSequenceStepper::init(), EigenExecutionerBase::init(), IterationAdaptiveDT::init(), Transient::init(), MooseMesh::init(), Sampler::init(), FEProblemBase::init(), NumPicardIterations::initialize(), PiecewiseLinearBase::initialSetup(), ReferenceResidualProblem::initialSetup(), MultiAppConservativeTransfer::initialSetup(), FullSolveMultiApp::initialSetup(), SolutionScalarAux::initialSetup(), SolutionAux::initialSetup(), Axisymmetric2D3DSolutionFunction::initialSetup(), Exodus::initialSetup(), SolutionFunction::initialSetup(), SolutionUserObject::initialSetup(), FEProblemBase::initialSetup(), AdvancedOutput::initOutputList(), AdvancedOutput::initShowHideLists(), MaterialBase::initStatefulProperties(), Function::integral(), InterfaceKernelTempl< T >::InterfaceKernelTempl(), InterfaceTimeKernel::InterfaceTimeKernel(), AugmentSparsityOnInterface::internalInit(), EigenExecutionerBase::inversePowerIteration(), InversePowerMethod::InversePowerMethod(), IterationAdaptiveDT::IterationAdaptiveDT(), LayeredSideIntegral::LayeredSideIntegral(), LeastSquaresFit::LeastSquaresFit(), LibmeshPartitioner::LibmeshPartitioner(), LinearCombinationFunction::LinearCombinationFunction(), LinearCombinationPostprocessor::LinearCombinationPostprocessor(), LinearNodalConstraint::LinearNodalConstraint(), LineMaterialSamplerBase< Real >::LineMaterialSamplerBase(), LineSearch::lineSearch(), LineValueSampler::LineValueSampler(), LowerBoundNodalKernel::LowerBoundNodalKernel(), PNGOutput::makePNG(), MaterialRealTensorValueAux::MaterialRealTensorValueAux(), MaterialRealVectorValueAux::MaterialRealVectorValueAux(), MaterialStdVectorRealGradientAux::MaterialStdVectorRealGradientAux(), MaterialVectorPostprocessor::MaterialVectorPostprocessor(), Distribution::median(), FunctorRelationshipManager::mesh_reinit(), SubProblem::meshChanged(), MeshExtruder::MeshExtruder(), MeshExtruderGenerator::MeshExtruderGenerator(), MeshSideSetGenerator::MeshSideSetGenerator(), SideSetsFromNormals::modify(), SideSetsFromPoints::modify(), AddExtraNodeset::modify(), BreakMeshByBlockBase::modify(), MeshExtruder::modify(), AssignElementSubdomainID::modify(), SmoothMesh::modify(), AddAllSideSetsByNormals::modify(), ElementDeleterBase::modify(), ParsedSubdomainMeshModifier::modify(), RenameBlock::modify(), ImageSubdomain::modify(), OrientedSubdomainBoundingBox::modify(), BoundingBoxNodeSet::modify(), AddSideSetsFromBoundingBox::modify(), SubdomainBoundingBox::modify(), MooseGhostPointNeighbors::MooseGhostPointNeighbors(), MooseMesh::MooseMesh(), MooseVariableBase::MooseVariableBase(), MortarConstraintBase::MortarConstraintBase(), MultiAppPostprocessorTransfer::MultiAppPostprocessorTransfer(), NearestNodeDistanceAux::NearestNodeDistanceAux(), NearestNodeValueAux::NearestNodeValueAux(), RenameBlockGenerator::newBlockID(), RenameBlock::newBlockID(), RenameBlockGenerator::newBlockName(), RenameBlock::newBlockName(), NewmarkBeta::NewmarkBeta(), NodalConstraint::NodalConstraint(), NodalScalarKernel::NodalScalarKernel(), NodalVariableValue::NodalVariableValue(), NumDOFs::NumDOFs(), NumNonlinearIterations::NumNonlinearIterations(), NumVars::NumVars(), FunctorRelationshipManager::operator()(), RelationshipManager::operator==(), XDA::output(), SolutionHistory::output(), Exodus::output(), AdvancedOutput::outputElementalVariables(), AdvancedOutput::outputInput(), AdvancedOutput::outputNodalVariables(), AdvancedOutput::outputPostprocessors(), AdvancedOutput::outputScalarVariables(), AdvancedOutput::outputSystemInformation(), Console::outputVectorPostprocessors(), AdvancedOutput::outputVectorPostprocessors(), MooseObject::paramError(), PiecewiseBilinear::parse(), ParsedAddSideset::ParsedAddSideset(), ParsedAux::ParsedAux(), ParsedGenerateSideset::ParsedGenerateSideset(), ParsedODEKernel::ParsedODEKernel(), ParsedSubdomainMeshGenerator::ParsedSubdomainMeshGenerator(), ParsedSubdomainMeshModifier::ParsedSubdomainMeshModifier(), ExplicitTimeIntegrator::performExplicitSolve(), PetscExternalPartitioner::PetscExternalPartitioner(), PhysicsBasedPreconditioner::PhysicsBasedPreconditioner(), PiecewiseBase::PiecewiseBase(), PiecewiseBilinear::PiecewiseBilinear(), PiecewiseLinearInterpolationMaterial::PiecewiseLinearInterpolationMaterial(), PiecewiseMulticonstant::PiecewiseMulticonstant(), PiecewiseMultiInterpolation::PiecewiseMultiInterpolation(), SolutionUserObject::pointValueGradientWrapper(), SolutionUserObject::pointValueWrapper(), LStableDirk2::postResidual(), LStableDirk3::postResidual(), ImplicitMidpoint::postResidual(), ExplicitTVDRK2::postResidual(), AStableDirk4::postResidual(), LStableDirk4::postResidual(), ExplicitRK2::postResidual(), Eigenvalue::postSolve(), Predictor::Predictor(), Transient::preExecute(), SolutionUserObject::readExodusII(), SolutionUserObject::readXda(), DerivativeParsedMaterialHelper::recurseDerivative(), FunctorRelationshipManager::redistribute(), ReferenceResidualProblem::ReferenceResidualProblem(), EqualValueEmbeddedConstraint::reinitConstraint(), RelativeSolutionDifferenceNorm::RelativeSolutionDifferenceNorm(), RenameBlock::RenameBlock(), RenameBlockGenerator::RenameBlockGenerator(), RenameBoundaryGenerator::RenameBoundaryGenerator(), RinglebMesh::RinglebMesh(), RinglebMeshGenerator::RinglebMeshGenerator(), ScalarComponentIC::ScalarComponentIC(), BicubicSplineFunction::secondDerivative(), FEProblemBase::setCoordSystem(), PiecewiseBase::setData(), EigenProblem::setEigenproblemType(), FEProblemSolve::setInnerSolve(), Sampler::setNumberOfCols(), Sampler::setNumberOfRandomSeeds(), Sampler::setNumberOfRows(), Exodus::setOutputDimensionInExodusWriter(), Split::setup(), TransientMultiApp::setupApp(), TimeSequenceStepperBase::setupSequence(), Transient::setupTimeIntegrator(), SideSetsFromBoundingBoxGenerator::SideSetsFromBoundingBoxGenerator(), SideSetsFromNormals::SideSetsFromNormals(), SideSetsFromNormalsGenerator::SideSetsFromNormalsGenerator(), SideSetsFromPoints::SideSetsFromPoints(), SideSetsFromPointsGenerator::SideSetsFromPointsGenerator(), SolutionTimeAdaptiveDT::SolutionTimeAdaptiveDT(), SolutionUserObject::SolutionUserObject(), PicardSolve::solve(), FullSolveMultiApp::solveStep(), SpatialAverageBase::SpatialAverageBase(), NearestPointIntegralVariablePostprocessor::spatialValue(), UserObject::spatialValue(), SpiralAnnularMesh::SpiralAnnularMesh(), SpiralAnnularMeshGenerator::SpiralAnnularMeshGenerator(), StitchedMesh::StitchedMesh(), NodalUserObject::subdomainSetup(), GeneralUserObject::subdomainSetup(), Constraint::subdomainSetup(), MaterialBase::subdomainSetup(), Console::systemInfoFlags(), TagMatrixAux::TagMatrixAux(), TagVectorAux::TagVectorAux(), Terminator::Terminator(), TestSetupPostprocessorDataActionFunction::TestSetupPostprocessorDataActionFunction(), ThreadedGeneralUserObject::ThreadedGeneralUserObject(), ThreadedGeneralUserObject::threadJoin(), DiscreteElementUserObject::threadJoin(), GeneralUserObject::threadJoin(), TiledMeshGenerator::TiledMeshGenerator(), Function::timeDerivative(), TimeExtremeValue::TimeExtremeValue(), TimePeriod::TimePeriod(), VectorPostprocessorVisualizationAux::timestepSetup(), MultiAppFieldTransfer::transfer(), MultiAppMeshFunctionTransfer::transferVariable(), MooseVariableScalar::uDot(), MooseVariableScalar::uDotDot(), MooseVariableScalar::uDotDotOld(), FEProblemBase::uDotDotOldRequested(), MooseVariableScalar::uDotOld(), FEProblemBase::uDotOldRequested(), EqualValueBoundaryConstraint::updateConstrainedNodes(), SolutionUserObject::updateExodusBracketingTimeIndices(), UpperBoundNodalKernel::UpperBoundNodalKernel(), NearestPointIntegralVariablePostprocessor::userObjectValue(), BoundingBoxIC::value(), Axisymmetric2D3DSolutionFunction::value(), ValueRangeMarker::ValueRangeMarker(), ValueThresholdMarker::ValueThresholdMarker(), MultiAppTransfer::variableIntegrityCheck(), VariableTimeIntegrationAux::VariableTimeIntegrationAux(), VectorNodalBC::VectorNodalBC(), VectorOfPostprocessors::VectorOfPostprocessors(), VectorPostprocessorFunction::VectorPostprocessorFunction(), MooseParsedGradFunction::vectorValue(), MooseParsedFunction::vectorValue(), VolumeHistogram::VolumeHistogram(), VTKOutput::VTKOutput(), writeStreamToFile(), and Console::writeStreamToFile().

mooseInfo()

template<typename... Args>

void MooseObject::mooseInfo ( Args &&...  args ) const

inlineinherited

Definition at line 162 of file MooseObject.h.

  {
    moose::internal::mooseInfoStream(_console, std::forward<Args>(args)...);
  }

Referenced by AStableDirk4::AStableDirk4(), ExplicitRK2::ExplicitRK2(), ExplicitTVDRK2::ExplicitTVDRK2(), ParsedMaterialHelper::functionsOptimize(), ImplicitMidpoint::ImplicitMidpoint(), LStableDirk2::LStableDirk2(), LStableDirk3::LStableDirk3(), LStableDirk4::LStableDirk4(), PNGOutput::makeMeshFunc(), MooseObject::paramInfo(), DerivativeParsedMaterialHelper::recurseDerivative(), ReferenceResidualProblem::ReferenceResidualProblem(), and FEProblemBase::setRestartFile().

mooseWarning()

template<typename... Args>

void MooseObject::mooseWarning ( Args &&...  args ) const

inlineinherited

Definition at line 150 of file MooseObject.h.

  {
    moose::internal::mooseWarningStream(_console, std::forward<Args>(args)...);
  }

Referenced by CartesianMeshGenerator::CartesianMeshGenerator(), MultiAppTransfer::checkMultiAppExecuteOn(), OversampleOutput::cloneMesh(), GapValueAux::computeValue(), ElementQualityChecker::finalize(), FiniteDifferencePreconditioner::FiniteDifferencePreconditioner(), ElementSubdomainIDGenerator::generate(), MooseMesh::getBoundaryIDs(), FEProblemBase::getInterfaceMaterial(), FEProblemBase::getMaterial(), MooseMesh::getSubdomainIDs(), ReferenceResidualProblem::initialSetup(), DerivativeFunctionMaterialBase::initialSetup(), FEProblemBase::initialSetup(), AdvancedOutput::initPostprocessorOrVectorPostprocessorLists(), LeastSquaresFit::LeastSquaresFit(), MaterialVectorPostprocessor::MaterialVectorPostprocessor(), AssignElementSubdomainID::modify(), NewmarkBeta::NewmarkBeta(), NodalPatchRecovery::NodalPatchRecovery(), NonlocalIntegratedBC::NonlocalIntegratedBC(), NonlocalKernel::NonlocalKernel(), Output::Output(), MooseObject::paramWarning(), Executioner::problem(), MaterialBase::resetQpProperties(), FEProblemBase::sizeZeroes(), TransientMultiApp::solveStep(), Tecplot::Tecplot(), and Checkpoint::updateCheckpointFiles().

name()

virtual const std::string& MooseObject::name ( ) const

inlinevirtualinherited

Get the name of the object.

Returns

The name of the object TODO:MooseVariableToMooseObject (see #10601)

Reimplemented in MooseVariableBase.

Definition at line 70 of file MooseObject.h.

{ return _name; }

Referenced by GridPartitioner::_do_partition(), FEProblemBase::addADJacobianInterfaceMaterial(), FEProblemBase::addADJacobianMaterial(), FEProblemBase::addADKernel(), FEProblemBase::addADResidualInterfaceMaterial(), FEProblemBase::addADResidualMaterial(), Executioner::addAttributeReporter(), DumpObjectsProblem::addAuxKernel(), FEProblemBase::addAuxKernel(), DumpObjectsProblem::addAuxScalarKernel(), FEProblemBase::addAuxScalarKernel(), DisplacedProblem::addAuxVariable(), DumpObjectsProblem::addBoundaryCondition(), FEProblemBase::addBoundaryCondition(), DumpObjectsProblem::addConstraint(), FEProblemBase::addConstraint(), FEProblemBase::addDamper(), DumpObjectsProblem::addDGKernel(), FEProblemBase::addDGKernel(), DumpObjectsProblem::addDiracKernel(), FEProblemBase::addDiracKernel(), FEProblemBase::addDistribution(), DumpObjectsProblem::addFunction(), FEProblemBase::addFunction(), ADDGKernel< compute_stage >::ADDGKernel(), FEProblemBase::addIndicator(), DumpObjectsProblem::addInitialCondition(), FEProblemBase::addInitialCondition(), DumpObjectsProblem::addInterfaceKernel(), FEProblemBase::addInterfaceKernel(), FEProblemBase::addInterfaceMaterial(), DumpObjectsProblem::addKernel(), FEProblemBase::addKernel(), FEProblemBase::addMarker(), DumpObjectsProblem::addMaterial(), FEProblemBase::addMaterial(), FEProblemBase::addMaterialHelper(), FEProblemBase::addMultiApp(), DumpObjectsProblem::addNodalKernel(), FEProblemBase::addNodalKernel(), FEProblemBase::addPostprocessor(), FEProblemBase::addPredictor(), CreateDisplacedProblemAction::addProxyRelationshipManagers(), FEProblemBase::addSampler(), DumpObjectsProblem::addScalarKernel(), FEProblemBase::addScalarKernel(), FEProblemBase::addTimeIntegrator(), FEProblemBase::addTransfer(), FEProblemBase::addUserObject(), DisplacedProblem::addVariable(), FEProblemBase::addVectorPostprocessor(), ADKernelTempl< T, compute_stage >::ADKernelTempl(), Output::advancedExecuteOn(), MultiApp::appPostprocessorValue(), MultiApp::appProblem(), MultiApp::appProblemBase(), MultiApp::appUserObjectBase(), ArrayDGKernel::ArrayDGKernel(), DerivativeParsedMaterialHelper::assembleDerivatives(), AStableDirk4::AStableDirk4(), Function::average(), MultiApp::backup(), BreakMeshByBlockGenerator::BreakMeshByBlockGenerator(), ChangeOverTimePostprocessor::ChangeOverTimePostprocessor(), FEProblemBase::checkDependMaterialsHelper(), Damper::checkMinDamping(), MaterialBase::checkStatefulSanity(), CoarsenedPiecewiseLinear::CoarsenedPiecewiseLinear(), CompositeFunction::CompositeFunction(), MaterialBase::computeProperties(), MaterialBase::computeSubdomainProperties(), FEProblemBase::computeUserObjectByName(), VectorPostprocessorVisualizationAux::computeValue(), MultiApp::createApp(), MeshGenerator::declareMeshProperty(), FEProblemBase::declareVectorPostprocessorVector(), demangle(), DerivativeSumMaterial::DerivativeSumMaterial(), DGKernel::DGKernel(), DGKernelBase::DGKernelBase(), DumpObjectsProblem::dumpObjectHelper(), ElementValueSampler::ElementValueSampler(), MooseMesh::errorIfDistributedMesh(), AB2PredictorCorrector::estimateTimeError(), SolutionUserObject::evalMeshFunction(), SolutionUserObject::evalMeshFunctionGradient(), SolutionUserObject::evalMultiValuedMeshFunction(), SolutionUserObject::evalMultiValuedMeshFunctionGradient(), MultiAppPostprocessorTransfer::execute(), StatisticsVectorPostprocessor::execute(), MultiAppPostprocessorInterpolationTransfer::execute(), MultiAppVariableValueSamplePostprocessorTransfer::execute(), MultiAppVectorPostprocessorTransfer::execute(), MultiAppCopyTransfer::execute(), MultiAppMeshFunctionTransfer::execute(), MultiAppInterpolationTransfer::execute(), MultiAppUserObjectTransfer::execute(), PointValue::execute(), MultiAppScalarToAuxScalarTransfer::execute(), MultiAppPostprocessorToAuxScalarTransfer::execute(), MultiAppVariableValueSampleTransfer::execute(), MultiAppNearestNodeTransfer::execute(), HistogramVectorPostprocessor::execute(), MultiAppProjectionTransfer::execute(), Exodus::Exodus(), FancyExtruderGenerator::FancyExtruderGenerator(), MultiApp::fillPositions(), PointSamplerBase::finalize(), FunctionDT::FunctionDT(), FunctionPresetBC::FunctionPresetBC(), GeneralUserObject::GeneralUserObject(), LowerDBlockFromSidesetGenerator::generate(), GeneratedMeshGenerator::generate(), StitchedMeshGenerator::generate(), Material::getADMaterialPropertyTempl(), MultiApp::getBoundingBox(), MooseObject::getCheckedPointerParam(), Control::getControllableParameterByName(), Control::getControllableValue(), Control::getControllableValueByName(), DistributionInterface::getDistribution(), FEProblemBase::getDistribution(), DistributionInterface::getDistributionByName(), MultiApp::getExecutioner(), OutputWarehouse::getFileNumbers(), FEProblemBase::getFunction(), FEProblemBase::getInterfaceMaterial(), SolutionUserObject::getLocalVarIndex(), Marker::getMarkerValue(), FEProblemBase::getMaterial(), SubProblem::getMaterialPropertyBlockNames(), SubProblem::getMaterialPropertyBoundaryNames(), Material::getMaterialPropertyOlderTempl(), InterfaceMaterial::getMaterialPropertyOlderTempl(), NodalPatchRecovery::getMaterialPropertyOlderTempl(), AuxKernelTempl< ComputeValueType >::getMaterialPropertyOlderTempl(), Material::getMaterialPropertyOldTempl(), InterfaceMaterial::getMaterialPropertyOldTempl(), NodalPatchRecovery::getMaterialPropertyOldTempl(), AuxKernelTempl< ComputeValueType >::getMaterialPropertyOldTempl(), Material::getMaterialPropertyTempl(), InterfaceMaterial::getMaterialPropertyTempl(), NodalPatchRecovery::getMaterialPropertyTempl(), AuxKernelTempl< ComputeValueType >::getMaterialPropertyTempl(), MeshGenerator::getMesh(), InterfaceMaterial::getNeighborMaterialPropertyOld(), InterfaceMaterial::getNeighborMaterialPropertyOlder(), InterfaceMaterial::getNeighborMaterialPropertyTempl(), OutputWarehouse::getOutput(), MooseObject::getParamTempl(), GeneralUserObject::getPostprocessorValue(), FEProblemBase::getPostprocessorValue(), GeneralUserObject::getPostprocessorValueByName(), FEProblemBase::getPostprocessorValueOld(), FEProblemBase::getPostprocessorValueOlder(), FEProblemBase::getSampler(), FEProblemBase::getScatterVectorPostprocessorValue(), FEProblemBase::getScatterVectorPostprocessorValueOld(), Transient::getTimeStepperName(), InitialConditionBase::getUserObjectBase(), FEProblemBase::getUserObjectBase(), InitialConditionBase::getUserObjectByNameTempl(), InitialConditionBase::getUserObjectTempl(), FEProblemBase::getUserObjectTempl(), GeneralUserObject::getVectorPostprocessorValue(), FEProblemBase::getVectorPostprocessorValue(), GeneralUserObject::getVectorPostprocessorValueByName(), FEProblemBase::getVectorPostprocessorValueOld(), FEProblemBase::hasFunction(), AdvancedOutput::hasOutputHelper(), FEProblemBase::hasPostprocessor(), FEProblemBase::hasUserObject(), FEProblemBase::hasVectorPostprocessor(), FEProblemBase::init(), AdvancedOutput::initExecutionTypes(), AttribName::initFrom(), CSVReader::initialize(), StatisticsVectorPostprocessor::initialize(), HistogramVectorPostprocessor::initialize(), SolutionScalarAux::initialSetup(), MultiAppProjectionTransfer::initialSetup(), DerivativeFunctionMaterialBase::initialSetup(), MultiApp::initialSetup(), SolutionUserObject::initialSetup(), AdvancedOutput::initOutputList(), FEProblemBase::initPostprocessorData(), AdvancedOutput::initPostprocessorOrVectorPostprocessorLists(), MaterialBase::initStatefulProperties(), FEProblemBase::initVectorPostprocessorData(), Function::integral(), InterfaceKernelTempl< T >::InterfaceKernelTempl(), Registry::isADObj(), MooseObject::isParamValid(), Registry::isRegisteredObj(), LinearCombinationFunction::LinearCombinationFunction(), Marker::Marker(), MatDiffusionBase< Real >::MatDiffusionBase(), MaterialDerivativeTestKernelBase< Real >::MaterialDerivativeTestKernelBase(), MaterialOutputAction::materialOutputHelper(), MaterialVectorPostprocessor::MaterialVectorPostprocessor(), Distribution::median(), MemoryUsageReporter::MemoryUsageReporter(), MeshSideSetGenerator::MeshSideSetGenerator(), ElementDeleterBase::modify(), MooseVariableInterface< Real >::MooseVariableInterface(), NodalValueSampler::NodalValueSampler(), NodalVariableValue::NodalVariableValue(), Registry::objData(), output(), Output::Output(), AdvancedOutput::outputElementalVariables(), ConsoleUtils::outputExecutionInformation(), AdvancedOutput::outputInput(), AdvancedOutput::outputNodalVariables(), ConsoleUtils::outputOutputInformation(), Nemesis::outputPostprocessors(), Exodus::outputPostprocessors(), AdvancedOutput::outputPostprocessors(), AdvancedOutput::outputScalarVariables(), OversampleOutput::outputStep(), Output::outputStep(), AdvancedOutput::outputSystemInformation(), AdvancedOutput::outputVectorPostprocessors(), ParsedAddSideset::ParsedAddSideset(), ParsedAux::ParsedAux(), ParsedGenerateSideset::ParsedGenerateSideset(), ParsedODEKernel::ParsedODEKernel(), ParsedSubdomainMeshGenerator::ParsedSubdomainMeshGenerator(), ParsedSubdomainMeshModifier::ParsedSubdomainMeshModifier(), PointSamplerBase::PointSamplerBase(), MultiAppConservativeTransfer::postExecute(), PresetBC::PresetBC(), PresetNodalBC::PresetNodalBC(), Registry::registerObjectsTo(), FEProblemBase::registerRandomInterface(), MaterialBase::resetQpProperties(), MultiApp::restore(), ScalarComponentIC::ScalarComponentIC(), MooseMesh::setBoundaryName(), Control::setControllableValue(), Control::setControllableValueByName(), OutputWarehouse::setFileNumbers(), MooseMesh::setSubdomainName(), Split::setup(), TransientMultiApp::setupApp(), SideSetsFromNormalsGenerator::SideSetsFromNormalsGenerator(), SideSetsFromPointsGenerator::SideSetsFromPointsGenerator(), SideValueSampler::SideValueSampler(), TransientMultiApp::solveStep(), SpatialAverageBase::SpatialAverageBase(), UserObject::spatialValue(), StitchedMesh::StitchedMesh(), SubProblem::storeBoundaryDelayedCheckMatProp(), SubProblem::storeBoundaryMatPropName(), SubProblem::storeBoundaryZeroMatProp(), SubProblem::storeSubdomainDelayedCheckMatProp(), SubProblem::storeSubdomainMatPropName(), SubProblem::storeSubdomainZeroMatProp(), MaterialBase::subdomainSetup(), TaggingInterface::TaggingInterface(), ThreadedGeneralUserObject::ThreadedGeneralUserObject(), Function::timeDerivative(), VectorPostprocessorVisualizationAux::timestepSetup(), TransientMultiApp::TransientMultiApp(), MultiAppTransfer::variableIntegrityCheck(), and AdvancedOutput::wantOutput().

onInterval()

bool Output::onInterval ( )

protectedvirtualinherited

Returns true if the output interval is satisfied.

Definition at line 203 of file Output.C.

{
  // The output flag to return
  bool output = false;
 
  // Return true if the current step on the current output interval and within the output time range
  // and within the output step range
  if (_time >= _start_time && _time <= _end_time && _t_step >= _start_step &&
      _t_step <= _end_step && (_t_step % _interval) == 0)
    output = true;
 
  // Return false if 'sync_only' is set to true
  if (_sync_only)
    output = false;
 
  // If sync times are not skipped, return true if the current time is a sync_time
  if (_sync_times.find(_time) != _sync_times.end())
    output = true;
 
  // Return the output status
  return output;
}

Referenced by Console::output(), OversampleOutput::outputStep(), and Output::outputStep().

output()

void DOFMapOutput::output ( const ExecFlagType &  type )

overridevirtual

Write the DOF mapt.

Implements Output.

Definition at line 111 of file DOFMapOutput.C.

{
  // Don't build this information if nothing is to be written
  if (!_write_screen && !_write_file)
    return;
 
  std::stringstream oss;
 
  // Get the DOF Map through the equation system
  const System & sys = _problem_ptr->es().get_system(_system_name); // TransientNonlinearImplicit
  const DofMap & dof_map = sys.get_dof_map();
 
  // fetch the KernelWarehouse through the NonlinearSystem
  NonlinearSystemBase & _nl = _problem_ptr->getNonlinearSystemBase();
  auto & kernels = _nl.getKernelWarehouse();
 
  // get a set of all subdomains
  const std::set<SubdomainID> & subdomains = _mesh.meshSubdomains();
 
  bool first = true;
  oss << "{\"ndof\": " << sys.n_dofs() << ", \"demangled\": ";
#if defined(LIBMESH_HAVE_GCC_ABI_DEMANGLE)
  oss << "true";
#else
  oss << "false";
#endif
  oss << ", \"vars\": [";
  for (unsigned int vg = 0; vg < dof_map.n_variable_groups(); ++vg)
  {
    const VariableGroup & vg_description(dof_map.variable_group(vg));
    for (unsigned int vn = 0; vn < vg_description.n_variables(); ++vn)
    {
      unsigned int var = vg_description.number(vn);
 
      if (!first)
        oss << ", ";
      first = false;
 
      oss << "{\"name\": \"" << vg_description.name(vn) << "\", \"subdomains\": [";
      for (std::set<SubdomainID>::const_iterator sd = subdomains.begin(); sd != subdomains.end();
           ++sd)
      {
        oss << (sd != subdomains.begin() ? ", " : "") << "{\"id\": " << *sd << ", \"kernels\": [";
 
        // if this variable has active kernels output them
        if (kernels.hasActiveVariableBlockObjects(var, *sd))
        {
          const auto & active_kernels = kernels.getActiveVariableBlockObjects(var, *sd);
          for (unsigned i = 0; i < active_kernels.size(); ++i)
          {
            KernelBase & kb = *(active_kernels[i].get());
            oss << (i > 0 ? ", " : "") << "{\"name\": \"" << kb.name() << "\", \"type\": \""
                << demangle(typeid(kb).name()) << "\"}";
          }
        }
        oss << "], \"dofs\": [";
 
        // get the list of unique DOFs for this variable
        // Start by looking at local DOFs
        std::set<dof_id_type> dofs;
        ConstElemRange * active_local_elems = _mesh.getActiveLocalElementRange();
        for (const auto & elem : *active_local_elems)
        {
          if (elem->subdomain_id() == *sd)
          {
            std::vector<dof_id_type> di;
            dof_map.dof_indices(elem, di, var);
            dofs.insert(di.begin(), di.end());
          }
        }
 
        // Then collect DOFs from other processors.  On a distributed
        // mesh they may know about DOFs we can't even see.
        _communicator.set_union(dofs);
 
        oss << join(dofs.begin(), dofs.end(), ", ") << "]}";
      }
      oss << "]}";
    }
  }
  oss << "]}\n";
 
  // Write the message to file stream
  if (_write_file)
    _file_output_stream << oss.str() << std::endl;
 
  // Write message to the screen
  if (_write_screen)
    _console << oss.str() << std::flush;
 
  // Write the actual file
  if (_write_file)
    writeStreamToFile();
}

Referenced by writeStreamToFile().

outputStep()

void Output::outputStep ( const ExecFlagType &  type )

virtualinherited

A single call to this function should output all the necessary data for a single timestep.

Parameters

type	The type execution flag (see Moose.h)

See also

outputNodalVariables outputElementalVariables outputScalarVariables outputPostprocessors

Reimplemented in OversampleOutput.

Definition at line 167 of file Output.C.

{
  CONSOLE_TIMED_PRINT("Outputting ", name());
 
  // Output is not allowed
  if (!_allow_output && type != EXEC_FORCED)
    return;
 
  // If recovering disable output of initial condition, it was already output
  if (type == EXEC_INITIAL && _app.isRecovering())
    return;
 
  // Return if the current output is not on the desired interval
  if (type != EXEC_FINAL && !onInterval())
    return;
 
  // Call the output method
  if (shouldOutput(type))
  {
    TIME_SECTION(_output_step_timer);
    output(type);
  }
}

Referenced by PetscOutput::petscLinearOutput(), and PetscOutput::petscNonlinearOutput().

paramError()

template<typename... Args>

void MooseObject::paramError ( const std::string &  param, Args...  args  ) const

inherited

Emits an error prefixed with the file and line number of the given param (from the input file) along with the full parameter path+name followed by the given args as the message.

If this object's parameters were not created directly by the Parser, then this function falls back to the normal behavior of mooseError - only printing a message using the given args.

Definition at line 215 of file MooseObject.h.

{
  Moose::show_trace = false;
  mooseError(paramErrorMsg(param, std::forward<Args>(args)...));
  Moose::show_trace = true;
}

Referenced by ADDGKernel< compute_stage >::ADDGKernel(), ADIntegratedBCTempl< T, compute_stage >::ADIntegratedBCTempl(), ADKernelTempl< T, compute_stage >::ADKernelTempl(), ADVectorFunctionDirichletBC< compute_stage >::ADVectorFunctionDirichletBC(), AnnularMesh::AnnularMesh(), AnnularMeshGenerator::AnnularMeshGenerator(), ArrayDGKernel::ArrayDGKernel(), ArrayIntegratedBC::ArrayIntegratedBC(), ArrayKernel::ArrayKernel(), BlockWeightedPartitioner::BlockWeightedPartitioner(), checkComponent(), Coupleable::checkVar(), MultiAppTransfer::checkVariable(), CombinerGenerator::CombinerGenerator(), ConcentricCircleMeshGenerator::ConcentricCircleMeshGenerator(), ConstantVectorPostprocessor::ConstantVectorPostprocessor(), Coupleable::Coupleable(), DGKernel::DGKernel(), DGKernelBase::DGKernelBase(), Eigenvalue::Eigenvalue(), ElementValueSampler::ElementValueSampler(), Executioner::Executioner(), FancyExtruderGenerator::FancyExtruderGenerator(), RenameBoundaryGenerator::generate(), MeshCollectionGenerator::generate(), StackGenerator::generate(), StitchedMeshGenerator::generate(), CombinerGenerator::generate(), Sampler::getGlobalSamples(), Sampler::getLocalSamples(), Sampler::getNextLocalRow(), MultiApp::init(), BlockRestrictable::initializeBlockRestrictable(), BoundaryRestrictable::initializeBoundaryRestrictable(), IntegratedBC::IntegratedBC(), InversePowerMethod::InversePowerMethod(), Kernel::Kernel(), PNGOutput::makeMeshFunc(), MeshCollectionGenerator::MeshCollectionGenerator(), MultiAppConservativeTransfer::MultiAppConservativeTransfer(), MultiAppInterpolationTransfer::MultiAppInterpolationTransfer(), MultiAppMeshFunctionTransfer::MultiAppMeshFunctionTransfer(), MultiAppNearestNodeTransfer::MultiAppNearestNodeTransfer(), MultiAppPostprocessorInterpolationTransfer::MultiAppPostprocessorInterpolationTransfer(), MultiAppPostprocessorToAuxScalarTransfer::MultiAppPostprocessorToAuxScalarTransfer(), MultiAppPostprocessorTransfer::MultiAppPostprocessorTransfer(), MultiAppProjectionTransfer::MultiAppProjectionTransfer(), MultiAppScalarToAuxScalarTransfer::MultiAppScalarToAuxScalarTransfer(), MultiAppTransfer::MultiAppTransfer(), MultiAppUserObjectTransfer::MultiAppUserObjectTransfer(), MultiAppVariableValueSamplePostprocessorTransfer::MultiAppVariableValueSamplePostprocessorTransfer(), MultiAppVariableValueSampleTransfer::MultiAppVariableValueSampleTransfer(), MultiAppVectorPostprocessorTransfer::MultiAppVectorPostprocessorTransfer(), NodalBC::NodalBC(), NodalEqualValueConstraint::NodalEqualValueConstraint(), NodalKernel::NodalKernel(), NodalValueSampler::NodalValueSampler(), PatchMeshGenerator::PatchMeshGenerator(), PatternedMeshGenerator::PatternedMeshGenerator(), PiecewiseFunctionTabulate::PiecewiseFunctionTabulate(), PlaneDeletionGenerator::PlaneDeletionGenerator(), RandomIC::RandomIC(), MooseMesh::setPartitioner(), MultiAppFieldTransfer::transfer(), Transfer::Transfer(), TransientMultiApp::TransientMultiApp(), VectorBodyForce::VectorBodyForce(), VectorFunctionDirichletBC::VectorFunctionDirichletBC(), and VectorFunctionIC::VectorFunctionIC().

paramErrorMsg()

template<typename... Args>

std::string MooseObject::paramErrorMsg ( const std::string &  param, Args...  args  ) const

inlineprivateinherited

Definition at line 185 of file MooseObject.h.

  {
    auto prefix = paramErrorPrefix(_pars, param);
    std::ostringstream oss;
    moose::internal::mooseStreamAll(oss, std::forward<Args>(args)...);
    std::string msg = oss.str();
 
    // Wrap error message to a separate line from prefix if it is about to
    // blow past 100 chars.  But only wrap if the prefix is long enough (12
    // chars) for the wrap to buy us much extra length.
    if ((prefix.size() > 12 && msg.size() + prefix.size() > 99) ||
        msg.find("\n") != std::string::npos)
    {
      if (prefix.size() > 0 && prefix[prefix.size() - 1] != ':')
        prefix += ":";
      return prefix + "\n    " + MooseUtils::replaceAll(msg, "\n", "\n    ");
    }
    return prefix + " " + msg;
  }

Referenced by MooseObject::paramError(), MooseObject::paramInfo(), and MooseObject::paramWarning().

parameters()

const InputParameters& MooseObject::parameters ( ) const

inlineinherited

Get the parameters of the object.

Returns

The parameters of the object

Definition at line 76 of file MooseObject.h.

{ return _pars; }

Referenced by FEProblemBase::addADJacobianInterfaceMaterial(), FEProblemBase::addADJacobianMaterial(), FEProblemBase::addADKernel(), FEProblemBase::addADResidualInterfaceMaterial(), FEProblemBase::addADResidualMaterial(), DumpObjectsProblem::addAuxKernel(), FEProblemBase::addAuxKernel(), DumpObjectsProblem::addAuxScalarKernel(), FEProblemBase::addAuxScalarKernel(), DisplacedProblem::addAuxVariable(), DumpObjectsProblem::addBoundaryCondition(), FEProblemBase::addBoundaryCondition(), DumpObjectsProblem::addConstraint(), FEProblemBase::addConstraint(), FEProblemBase::addDamper(), DumpObjectsProblem::addDGKernel(), FEProblemBase::addDGKernel(), DumpObjectsProblem::addDiracKernel(), FEProblemBase::addDiracKernel(), FEProblemBase::addDistribution(), DumpObjectsProblem::addFunction(), FEProblemBase::addFunction(), FEProblemBase::addIndicator(), DumpObjectsProblem::addInitialCondition(), FEProblemBase::addInitialCondition(), DumpObjectsProblem::addInterfaceKernel(), FEProblemBase::addInterfaceKernel(), FEProblemBase::addInterfaceMaterial(), DumpObjectsProblem::addKernel(), FEProblemBase::addKernel(), FEProblem::addLineSearch(), FEProblemBase::addMarker(), DumpObjectsProblem::addMaterial(), FEProblemBase::addMaterial(), FEProblemBase::addMaterialHelper(), FEProblemBase::addMultiApp(), DumpObjectsProblem::addNodalKernel(), FEProblemBase::addNodalKernel(), FEProblemBase::addOutput(), FEProblemBase::addPostprocessor(), FEProblemBase::addPredictor(), FEProblemBase::addSampler(), DumpObjectsProblem::addScalarKernel(), FEProblemBase::addScalarKernel(), FEProblemBase::addTimeIntegrator(), FEProblemBase::addTransfer(), FEProblemBase::addUserObject(), DisplacedProblem::addVariable(), FEProblemBase::addVectorPostprocessor(), ADPiecewiseLinearInterpolationMaterial< compute_stage >::ADPiecewiseLinearInterpolationMaterial(), AdvancedOutput::AdvancedOutput(), ADVectorFunctionDirichletBC< compute_stage >::ADVectorFunctionDirichletBC(), AnnularMesh::AnnularMesh(), AnnularMeshGenerator::AnnularMeshGenerator(), assemble_l2(), Moose::assemble_matrix(), AuxKernelTempl< ComputeValueType >::AuxKernelTempl(), AuxScalarKernel::AuxScalarKernel(), BoundsAux::BoundsAux(), LibmeshPartitioner::clone(), OversampleOutput::cloneMesh(), Moose::compute_bounds(), Moose::compute_jacobian(), Moose::compute_nearnullspace(), Moose::compute_nullspace(), Moose::compute_postcheck(), Moose::compute_transpose_nullspace(), Console::Console(), DumpObjectsProblem::deduceNecessaryParameters(), DumpObjectsProblem::dumpObjectHelper(), EigenProblem::EigenProblem(), Eigenvalue::Eigenvalue(), Exodus::Exodus(), FEProblem::FEProblem(), GapValueAux::GapValueAux(), MooseObject::getCheckedPointerParam(), GhostingUserObject::GhostingUserObject(), MooseMesh::init(), BlockRestrictable::initializeBlockRestrictable(), FEProblemBase::initNullSpaceVectors(), InterfaceKernelTempl< T >::InterfaceKernelTempl(), isValid(), LayeredSideIntegral::LayeredSideIntegral(), MooseVariableInterface< Real >::MooseVariableInterface(), NodeFaceConstraint::NodeFaceConstraint(), PatchMeshGenerator::PatchMeshGenerator(), PenetrationAux::PenetrationAux(), PiecewiseBilinear::PiecewiseBilinear(), PiecewiseLinearInterpolationMaterial::PiecewiseLinearInterpolationMaterial(), MultiAppProjectionTransfer::projectSolution(), RandomIC::RandomIC(), InputParameterWarehouse::removeInputParameters(), EigenProblem::scaleEigenvector(), FEProblem::setInputParametersFEProblem(), FEProblemBase::setInputParametersFEProblem(), DumpObjectsProblem::stringifyParameters(), Transient::Transient(), VectorBodyForce::VectorBodyForce(), VectorFunctionDirichletBC::VectorFunctionDirichletBC(), and VectorFunctionIC::VectorFunctionIC().

paramInfo()

template<typename... Args>

void MooseObject::paramInfo ( const std::string &  param, Args...  args  ) const

inherited

Emits an informational message prefixed with the file and line number of the given param (from the input file) along with the full parameter path+name followed by the given args as the message.

If this object's parameters were not created directly by the Parser, then this function falls back to the normal behavior of mooseInfo - only printing a message using the given args.

Definition at line 231 of file MooseObject.h.

{
  mooseInfo(paramErrorMsg(param, std::forward<Args>(args)...));
}

Referenced by TransientMultiApp::TransientMultiApp().

paramWarning()

template<typename... Args>

void MooseObject::paramWarning ( const std::string &  param, Args...  args  ) const

inherited

Emits a warning prefixed with the file and line number of the given param (from the input file) along with the full parameter path+name followed by the given args as the message.

If this object's parameters were not created directly by the Parser, then this function falls back to the normal behavior of mooseWarning - only printing a message using the given args.

Definition at line 224 of file MooseObject.h.

{
  mooseWarning(paramErrorMsg(param, std::forward<Args>(args)...));
}

Referenced by Executioner::Executioner().

petscLinearOutput()

PetscErrorCode PetscOutput::petscLinearOutput ( KSP  , PetscInt  its, PetscReal  fnorm, void *  void_ptr  )

staticprivateinherited

Performs the output onlinear iterations.

This is the monitor method that PETSc will call on linear iterations

This is one of three locations where we explicitly flush the output buffers during a simulation: PetscOutput::petscNonlinearOutput() PetscOutput::petscLinearOutput() OutputWarehouse::outputStep()

All other Console output should be using newlines to avoid covering buffer errors and to avoid excessive I/O. This call is necessary. In the PETSc callback the context bypasses the OutputWarehouse.

Definition at line 214 of file PetscOutput.C.

{
  // Get the Outputter object
  PetscOutput * ptr = static_cast<PetscOutput *>(void_ptr);
 
  // Update the pseudo time
  ptr->_linear_time += ptr->_linear_dt;
 
  // Set the current norm and iteration number
  ptr->_norm = norm;
  ptr->_linear_iter = its;
 
  // Set the flag indicating that output is occurring on the non-linear residual
  ptr->_on_linear_residual = true;
 
  // Perform the output
  ptr->outputStep(EXEC_LINEAR);
 
  ptr->_app.getOutputWarehouse().flushConsoleBuffer();
 
  // Reset the linear output flag and the simulation time
  ptr->_on_linear_residual = false;
 
  // Done
  return 0;
}

Referenced by PetscOutput::solveSetup().

petscNonlinearOutput()

PetscErrorCode PetscOutput::petscNonlinearOutput ( SNES  , PetscInt  its, PetscReal  fnorm, void *  void_ptr  )

staticprivateinherited

Performs the output on non-linear iterations.

This is the monitor method that PETSc will call on non-linear iterations

This is one of three locations where we explicitly flush the output buffers during a simulation: PetscOutput::petscNonlinearOutput() PetscOutput::petscLinearOutput() OutputWarehouse::outputStep()

All other Console output should be using newlines to avoid covering buffer errors and to avoid excessive I/O. This call is necessary. In the PETSc callback the context bypasses the OutputWarehouse.

Definition at line 174 of file PetscOutput.C.

{
  // Get the outputter object
  PetscOutput * ptr = static_cast<PetscOutput *>(void_ptr);
 
  // Update the pseudo times
  ptr->_nonlinear_time += ptr->_nonlinear_dt;
  ptr->_linear_time = ptr->_nonlinear_time;
 
  // Set the current norm and iteration number
  ptr->_norm = norm;
  ptr->_nonlinear_iter = its;
 
  // Set the flag indicating that output is occurring on the non-linear residual
  ptr->_on_nonlinear_residual = true;
 
  // Perform the output
  ptr->outputStep(EXEC_NONLINEAR);
 
  ptr->_app.getOutputWarehouse().flushConsoleBuffer();
 
  // Reset the non-linear output flag and the simulation time
  ptr->_on_nonlinear_residual = false;
 
  // Done
  return 0;
}

Referenced by PetscOutput::solveSetup().

registerRestartableDataOnApp()

RestartableDataValue & Restartable::registerRestartableDataOnApp ( const std::string &  name, std::unique_ptr< RestartableDataValue >  data, THREAD_ID  tid  )

privateinherited

Helper function for actually registering the restartable data.

Definition at line 48 of file Restartable.C.

{
  return _restartable_app.registerRestartableData(name, std::move(data), tid, false, false);
}

Referenced by Restartable::declareRestartableDataWithContext().

registerRestartableNameWithFilterOnApp()

void Restartable::registerRestartableNameWithFilterOnApp ( const std::string &  name, Moose::RESTARTABLE_FILTER  filter  )

privateinherited

Helper function for actually registering the restartable data.

Definition at line 56 of file Restartable.C.

{
  _restartable_app.registerRestartableNameWithFilter(name, filter);
}

Referenced by Restartable::declareRecoverableData().

registerTimedSection()

PerfID PerfGraphInterface::registerTimedSection ( const std::string &  section_name, const unsigned int  level  )

protectedinherited

Call to register a named section for timing.

Parameters

section_name	The name of the code section to be timed
level	The importance of the timer - lower is more important (0 will always come out)

Returns

The ID of the section - use when starting timing

Definition at line 51 of file PerfGraphInterface.C.

{
  if (_prefix != "")
    return _perf_graph.registerSection(_prefix + "::" + section_name, level);
  else
    return _perf_graph.registerSection(section_name, level);
}

residualSetup()

void SetupInterface::residualSetup ( )

virtualinherited

Gets called just before the residual is computed and before this object is asked to do its job.

Reimplemented in NodeFaceConstraint.

Definition at line 59 of file SetupInterface.C.

{
}

setFileNumber()

void FileOutput::setFileNumber ( unsigned int  num )

inherited

Sets the file number manually.

This method was implemented for the MultiApp system, particularly when reseting an application and a new output file is desired after the reset.

Definition at line 144 of file FileOutput.C.

{
  _file_num = num;
}

Referenced by OutputWarehouse::setFileNumbers().

shouldOutput()

bool FileOutput::shouldOutput ( const ExecFlagType &  type )

overrideprotectedvirtualinherited

Checks if the output method should be executed.

Reimplemented from Output.

Reimplemented in AdvancedOutput.

Definition at line 105 of file FileOutput.C.

{
  if (!checkFilename())
    return false;
  return Output::shouldOutput(type);
}

solveSetup()

void PetscOutput::solveSetup ( )

overrideprivatevirtualinherited

Internal setup function that executes at the beginning of the time step.

Reimplemented from Output.

Definition at line 130 of file PetscOutput.C.

{
// Only execute if PETSc exists
#ifdef LIBMESH_HAVE_PETSC
 
  // Extract the non-linear and linear solvers from PETSc
  NonlinearSystemBase & nl = _problem_ptr->getNonlinearSystemBase();
  PetscNonlinearSolver<Number> * petsc_solver =
      dynamic_cast<PetscNonlinearSolver<Number> *>(nl.nonlinearSolver());
  SNES snes = petsc_solver->snes();
  KSP ksp;
  SNESGetKSP(snes, &ksp);
 
  // Update the pseudo times
  _nonlinear_time = _time_old; // non-linear time starts with the previous time step
  if (_dt != 0)
    _nonlinear_dt = _dt / _nonlinear_dt_divisor; // set the pseudo non-linear timestep as fraction
                                                 // of real timestep for transient executioners
  else
    _nonlinear_dt = 1. / _nonlinear_dt_divisor; // set the pseudo non-linear timestep for steady
                                                // executioners (here _dt==0)
 
  _linear_dt = _nonlinear_dt / _linear_dt_divisor; // set the pseudo linear timestep
 
  // Set the PETSc monitor functions
  if (_execute_on.contains(EXEC_NONLINEAR) &&
      (_time >= _nonlinear_start_time - _t_tol && _time <= _nonlinear_end_time + _t_tol))
  {
    PetscErrorCode ierr = SNESMonitorSet(snes, petscNonlinearOutput, this, PETSC_NULL);
    CHKERRABORT(_communicator.get(), ierr);
  }
 
  if (_execute_on.contains(EXEC_LINEAR) &&
      (_time >= _linear_start_time - _t_tol && _time <= _linear_end_time + _t_tol))
  {
    PetscErrorCode ierr = KSPMonitorSet(ksp, petscLinearOutput, this, PETSC_NULL);
    CHKERRABORT(_communicator.get(), ierr);
  }
#endif
}

subdomainSetup()

void SetupInterface::subdomainSetup ( )

virtualinherited

Gets called when the subdomain changes (i.e.

in a Jacobian or residual loop) and before this object is asked to do its job

Reimplemented in Constraint, MaterialBase, Material, GeneralUserObject, NodalUserObject, and ThreadedGeneralUserObject.

Definition at line 64 of file SetupInterface.C.

{
}

time()

Real PetscOutput::time ( )

overridevirtualinherited

Get the output time.

This outputter enables the ability to perform output on the nonlinear and linear iterations performed by PETSc. To separate theses outputs within the output a pseudo time is defined, this function provides this time and it should be used in place of _time from Outputter.

Reimplemented from Output.

Definition at line 254 of file PetscOutput.C.

{
  if (_on_nonlinear_residual)
    return _nonlinear_time;
  else if (_on_linear_residual)
    return _linear_time;
  else
    return Output::time();
}

Referenced by FileOutput::FileOutput(), Tecplot::output(), Nemesis::output(), Exodus::outputEmptyTimestep(), Exodus::outputNodalVariables(), TableOutput::outputPostprocessors(), TableOutput::outputScalarVariables(), and Console::writeTimestepInformation().

timeOld()

Real Output::timeOld ( )

virtualinherited

Get the old output time.

Returns

The old output time, which may be different than the simulation time

See also

time()

Definition at line 236 of file Output.C.

{
  if (_transient)
    return _time_old;
  else
    return _t_step - 1;
}

Referenced by Console::writeTimestepInformation().

timeStep()

int Output::timeStep ( )

virtualinherited

Get the current time step.

Definition at line 263 of file Output.C.

{
  return _t_step;
}

Referenced by Checkpoint::filename(), CSV::getVectorPostprocessorFileName(), and Console::writeTimestepInformation().

timestepSetup()

void SetupInterface::timestepSetup ( )

virtualinherited

Gets called at the beginning of the timestep before this object is asked to do its job.

Reimplemented in SolutionUserObject, Console, VectorPostprocessorVisualizationAux, NumNonlinearIterations, EqualValueEmbeddedConstraint, VectorMemoryUsage, and MemoryUsage.

Definition at line 49 of file SetupInterface.C.

{
}

type()

const std::string& MooseObject::type ( ) const

inlineinherited

Get the type of this object.

Returns

the name of the type of this object

Definition at line 63 of file MooseObject.h.

{ return _type; }

Referenced by FEProblemBase::addArrayVariable(), FEProblemBase::addAuxArrayVariable(), DumpObjectsProblem::addAuxKernel(), DumpObjectsProblem::addAuxScalarKernel(), FEProblemBase::addAuxScalarVariable(), FEProblemBase::addAuxVariable(), DumpObjectsProblem::addBoundaryCondition(), DumpObjectsProblem::addConstraint(), DumpObjectsProblem::addDGKernel(), DumpObjectsProblem::addDiracKernel(), FEProblemBase::addDistribution(), DumpObjectsProblem::addFunction(), FEProblemBase::addFunction(), DumpObjectsProblem::addInitialCondition(), DumpObjectsProblem::addInterfaceKernel(), DumpObjectsProblem::addKernel(), DumpObjectsProblem::addMaterial(), DumpObjectsProblem::addNodalKernel(), FEProblemBase::addPredictor(), FEProblemBase::addSampler(), DumpObjectsProblem::addScalarKernel(), FEProblemBase::addScalarVariable(), PhysicsBasedPreconditioner::addSystem(), FEProblemBase::addTimeIntegrator(), FEProblemBase::addVariable(), FEProblemBase::advanceMultiApps(), FEProblemBase::backupMultiApps(), MooseMesh::buildRefinementAndCoarseningMaps(), FEProblemBase::computeAuxiliaryKernels(), DGKernel::computeElemNeighJacobian(), ArrayDGKernel::computeElemNeighJacobian(), ElemElemConstraint::computeElemNeighJacobian(), DGKernel::computeElemNeighResidual(), ElemElemConstraint::computeElemNeighResidual(), ArrayDGKernel::computeElemNeighResidual(), FEProblemBase::computeMultiAppsDT(), DGKernel::computeOffDiagElemNeighJacobian(), ArrayDGKernel::computeOffDiagElemNeighJacobian(), DGConvection::computeQpJacobian(), ArrayDGDiffusion::computeQpJacobian(), InterfaceReaction::computeQpJacobian(), TiedValueConstraint::computeQpJacobian(), CoupledTiedValueConstraint::computeQpJacobian(), DGDiffusion::computeQpJacobian(), LinearNodalConstraint::computeQpJacobian(), EqualValueBoundaryConstraint::computeQpJacobian(), EqualValueEmbeddedConstraint::computeQpJacobian(), CoupledTiedValueConstraint::computeQpOffDiagJacobian(), EqualValueEmbeddedConstraint::computeQpOffDiagJacobian(), ArrayDGKernel::computeQpOffDiagJacobian(), DGConvection::computeQpResidual(), ArrayDGDiffusion::computeQpResidual(), InterfaceReaction::computeQpResidual(), TiedValueConstraint::computeQpResidual(), CoupledTiedValueConstraint::computeQpResidual(), LinearNodalConstraint::computeQpResidual(), DGDiffusion::computeQpResidual(), EqualValueBoundaryConstraint::computeQpResidual(), EqualValueEmbeddedConstraint::computeQpResidual(), FEProblemBase::computeUserObjectByName(), FEProblemBase::computeUserObjects(), FEProblemBase::computeUserObjectsInternal(), DisplacedProblem::createQRules(), FEProblemBase::createQRules(), DumpObjectsProblem::deduceNecessaryParameters(), DumpObjectsProblem::dumpObjectHelper(), FEProblemBase::duplicateVariableCheck(), FEProblemBase::execMultiApps(), FEProblemBase::execMultiAppTransfers(), FEProblemBase::execTransfers(), FEProblemBase::finishMultiAppStep(), ElementSubdomainIDGenerator::generate(), ElementGenerator::getElemType(), FEProblemBase::getInterfaceMaterial(), FEProblemBase::getMaterial(), FEProblemBase::getMaterialData(), FEProblemBase::getTransfers(), FEProblemBase::hasMultiApps(), AdvancedOutput::hasOutput(), FEProblemBase::incrementMultiAppTStep(), AdvancedOutput::initAvailableLists(), AdvancedOutput::initShowHideLists(), RelationshipManager::isType(), AssignElementSubdomainID::modify(), ControlOutput::output(), Gnuplot::output(), CSV::output(), Exodus::output(), Console::output(), Nemesis::output(), AdvancedOutput::output(), OversampleOutput::outputStep(), Output::outputStep(), FEProblemBase::outputStep(), FEProblemBase::restoreMultiApps(), FEProblemBase::setCoupling(), PerfGraphOutput::shouldOutput(), FileOutput::shouldOutput(), Output::shouldOutput(), AdvancedOutput::shouldOutput(), DisplacedProblem::updateGeomSearch(), FEProblemBase::updateGeomSearch(), and AdvancedOutput::wantOutput().

validParams()

InputParameters DOFMapOutput::validParams ( )

static

Definition at line 31 of file DOFMapOutput.C.

{
  // Get the parameters from the base class
  InputParameters params = FileOutput::validParams();
  params.addClassDescription("Output degree-of-freedom (DOF) map.");
 
  // Screen and file output toggles
  params.addParam<bool>("output_screen", false, "Output to the screen");
  params.addParam<bool>("output_file", true, "Output to the file");
  params.addParam<std::string>("system_name", "nl0", "System to output");
 
  // By default this only executes on the initial timestep
  params.set<ExecFlagEnum>("execute_on", true) = EXEC_INITIAL;
 
  return params;
}

writeStreamToFile()

void DOFMapOutput::writeStreamToFile ( bool  append = true )

protected

Write the file stream to the file.

Parameters

append

Toggle for appending the file

This helper function writes the _file_output_stream to the file and clears the stream, by default the file is appended. This does nothing if 'output_file' is false.

Definition at line 82 of file DOFMapOutput.C.

{
  // Create the stream
  std::ofstream output;
 
  // Open the file and write contents of file output stream and close the file
  output.open(filename().c_str(), std::ios::trunc);
  if (output.fail())
    mooseError("Unable to open file ", filename());
 
  output << _file_output_stream.str();
  output.close();
 
  // Clear the file output stream
  _file_output_stream.str("");
  _file_num++;
}

Referenced by output().

Member Data Documentation

_advanced_execute_on

OutputOnWarehouse Output::_advanced_execute_on

protectedinherited

Storage for the individual component execute flags.

Definition at line 244 of file Output.h.

Referenced by Output::advancedExecuteOn(), AdvancedOutput::advancedExecuteOn(), AdvancedOutput::AdvancedOutput(), AdvancedOutput::hasOutput(), AdvancedOutput::hasOutputHelper(), Console::initialSetup(), AdvancedOutput::initialSetup(), AdvancedOutput::initPostprocessorOrVectorPostprocessorLists(), and AdvancedOutput::wantOutput().

_allow_output

bool Output::_allow_output

protectedinherited

Flag for disabling output.

Definition at line 235 of file Output.h.

Referenced by Output::allowOutput(), OversampleOutput::outputStep(), and Output::outputStep().

_app

MooseApp& MooseObject::_app

protectedinherited

The MooseApp this object is associated with.

Definition at line 172 of file MooseObject.h.

Referenced by GridPartitioner::_do_partition(), AB2PredictorCorrector::AB2PredictorCorrector(), Executioner::addAttributeReporter(), FEProblemBase::addMaterialHelper(), FEProblemBase::addMultiApp(), FEProblemBase::addOutput(), FEProblemBase::allowOutput(), AStableDirk4::AStableDirk4(), FileMesh::buildMesh(), MeshGeneratorMesh::buildMesh(), MooseMesh::buildMeshBaseObject(), FEProblemBase::checkNonlinearConvergence(), OversampleOutput::cloneMesh(), FEProblemBase::computeJacobianTags(), FEProblemBase::computeResidualTags(), Console::Console(), TimeStepper::constrainStep(), MultiApp::createApp(), MeshGenerator::declareMeshProperty(), DumpObjectsProblem::dumpObjectHelper(), DumpObjectsProblem::dumpVariableHelper(), EigenExecutionerBase::EigenExecutionerBase(), EigenKernel::EigenKernel(), NonlinearEigen::execute(), InversePowerMethod::execute(), Transient::execute(), Steady::execute(), FileOutput::FileOutput(), FEProblemBase::forceOutput(), MeshGenerator::getMesh(), MeshGenerator::getMeshByName(), MooseObject::getMooseApp(), NumRelationshipManagers::getValue(), GhostingUserObject::GhostingUserObject(), NonlinearEigen::init(), InversePowerMethod::init(), Transient::init(), Steady::init(), MooseMesh::init(), NumPicardIterations::initialize(), TimePeriod::initialSetup(), Console::initialSetup(), MultiApp::initialSetup(), FEProblemBase::initialSetup(), AdvancedOutput::initOutputList(), FEProblemBase::initPetscOutput(), AdvancedOutput::initPostprocessorOrVectorPostprocessorLists(), ElementSideNeighborLayers::internalInit(), MeshGeneratorMesh::MeshGeneratorMesh(), MooseObject::mooseError(), EigenExecutionerBase::normalizeSolution(), AugmentSparsityOnInterface::operator()(), PerfGraphOutput::output(), Tecplot::output(), Exodus::output(), Nemesis::output(), ControlOutput::outputActiveObjects(), ControlOutput::outputChangedControls(), ControlOutput::outputControls(), Exodus::outputEmptyTimestep(), Console::outputInput(), Exodus::outputInput(), Exodus::outputNodalVariables(), OversampleOutput::outputStep(), Output::outputStep(), FEProblemBase::outputStep(), Console::outputSystemInformation(), MultiApp::parentOutputPositionChanged(), PerformanceData::PerformanceData(), PetscOutput::petscLinearOutput(), PetscOutput::petscNonlinearOutput(), Eigenvalue::postSolve(), Transient::preExecute(), FEProblemBase::projectSolution(), FEProblemBase::setRestartFile(), TransientMultiApp::setupApp(), TimeSequenceStepperBase::setupSequence(), Transient::setupTimeIntegrator(), TransientMultiApp::solveStep(), FEProblemBase::subdomainSetup(), FEProblemBase::theWarehouse(), TimeExtremeValue::TimeExtremeValue(), TimePeriod::TimePeriod(), FEProblemBase::timestepSetup(), Transient::Transient(), and Console::write().

_console

const ConsoleStream ConsoleStreamInterface::_console

inherited

An instance of helper class to write streams to the Console objects.

Definition at line 31 of file ConsoleStreamInterface.h.

Referenced by IterationAdaptiveDT::acceptStep(), Adaptivity::adaptMesh(), FEProblemBase::adaptMesh(), SimplePredictor::apply(), MultiApp::backup(), FEProblemBase::backupMultiApps(), ReferenceResidualProblem::checkNonlinearConvergence(), FEProblemBase::checkProblemIntegrity(), CoarsenedPiecewiseLinear::CoarsenedPiecewiseLinear(), IterationAdaptiveDT::computeAdaptiveDT(), Transient::computeConstrainedDT(), NonlinearSystemBase::computeDamping(), IterationAdaptiveDT::computeDT(), IterationAdaptiveDT::computeFailedDT(), IterationAdaptiveDT::computeInterpolationDT(), FEProblemBase::computeResidualTags(), NonlinearSystem::computeScaling(), IterationAdaptiveDT::constrainStep(), TimeStepper::constrainStep(), MultiApp::createApp(), FEProblemBase::execMultiApps(), FEProblemBase::execMultiAppTransfers(), MultiAppPostprocessorTransfer::execute(), MultiAppPostprocessorInterpolationTransfer::execute(), MultiAppVariableValueSamplePostprocessorTransfer::execute(), MultiAppVectorPostprocessorTransfer::execute(), MultiAppMeshFunctionTransfer::execute(), MultiAppCopyTransfer::execute(), MultiAppInterpolationTransfer::execute(), MultiAppUserObjectTransfer::execute(), MultiAppVariableValueSampleTransfer::execute(), MultiAppScalarToAuxScalarTransfer::execute(), MultiAppPostprocessorToAuxScalarTransfer::execute(), MultiAppNearestNodeTransfer::execute(), MultiAppProjectionTransfer::execute(), Steady::execute(), ActionWarehouse::executeActionsWithAction(), ActionWarehouse::executeAllActions(), ElementQualityChecker::finalize(), FEProblemBase::finishMultiAppStep(), MultiApp::globalAppToLocal(), InversePowerMethod::init(), NonlinearEigen::init(), Steady::init(), FEProblemBase::initialAdaptMesh(), FEProblemBase::initialSetup(), EigenExecutionerBase::inversePowerIteration(), Transient::keepGoing(), IterationAdaptiveDT::limitDTByFunction(), IterationAdaptiveDT::limitDTToPostprocessorValue(), EigenExecutionerBase::makeBXConsistent(), Console::meshChanged(), MooseObject::mooseDeprecated(), MooseObject::mooseInfo(), MooseObject::mooseWarning(), PerfGraphOutput::output(), output(), VariableResidualNormsDebugOutput::output(), Console::output(), ControlOutput::outputActiveObjects(), ControlOutput::outputChangedControls(), ControlOutput::outputControls(), Console::outputInput(), Console::outputPostprocessors(), Console::outputScalarVariables(), Console::outputSystemInformation(), FEProblemBase::possiblyRebuildGeomSearchPatches(), MultiAppConservativeTransfer::postExecute(), EigenExecutionerBase::postExecute(), AB2PredictorCorrector::postSolve(), ActionWarehouse::printActionDependencySets(), EigenExecutionerBase::printEigenvalue(), MaterialPropertyDebugOutput::printMaterialMap(), AutomaticMortarGeneration::projectMasterNodesSinglePair(), AutomaticMortarGeneration::projectSlaveNodesSinglePair(), SolutionTimeAdaptiveDT::rejectStep(), DT2::rejectStep(), MultiApp::restore(), FEProblemBase::restoreMultiApps(), SimplePredictor::shouldApply(), PicardSolve::solve(), NonlinearSystem::solve(), LStableDirk2::solve(), LStableDirk3::solve(), ImplicitMidpoint::solve(), ExplicitTVDRK2::solve(), AStableDirk4::solve(), LStableDirk4::solve(), ExplicitRK2::solve(), TransientMultiApp::solveStep(), PicardSolve::solveStep(), DT2::step(), AB2PredictorCorrector::step(), NonlinearEigen::takeStep(), Transient::takeStep(), Console::writeTimestepInformation(), Console::writeVariableNorms(), and FEProblemBase::~FEProblemBase().

_current_execute_flag

const ExecFlagType& SetupInterface::_current_execute_flag

protectedinherited

Reference to FEProblemBase.

Definition at line 99 of file SetupInterface.h.

_dt

Real& Output::_dt

protectedinherited

Time step delta.

Definition at line 199 of file Output.h.

Referenced by Output::dt(), and PetscOutput::solveSetup().

_dt_old

Real& Output::_dt_old

protectedinherited

Old time step delta.

Definition at line 202 of file Output.h.

Referenced by Output::dtOld(), and Console::writeTimestepInformation().

_empty_execute_enum

ExecFlagEnum SetupInterface::_empty_execute_enum

privateinherited

Empty ExecFlagEnum for the case when the "execute_on" parameter is not included.

This is private because others should not be messing with it.

Definition at line 89 of file SetupInterface.h.

Referenced by SetupInterface::SetupInterface().

_enabled

const bool& MooseObject::_enabled

protectedinherited

Reference to the "enable" InputParaemters, used by Controls for toggling on/off MooseObjects.

Definition at line 181 of file MooseObject.h.

Referenced by MooseObject::enabled().

_end_step

int Output::_end_step

protectedinherited

End outputting at this time step.

Definition at line 223 of file Output.h.

Referenced by Output::onInterval().

_end_time

Real Output::_end_time

protectedinherited

End outputting time.

Definition at line 217 of file Output.h.

_es_ptr

EquationSystems* Output::_es_ptr

protectedinherited

Reference the the libMesh::EquationSystems object that contains the data.

Definition at line 178 of file Output.h.

Referenced by AdvancedOutput::initAvailableLists(), OversampleOutput::initOversample(), AdvancedOutput::initShowHideLists(), PNGOutput::makeMeshFunc(), VTKOutput::output(), GMVOutput::output(), XDA::output(), Tecplot::output(), Output::Output(), Nemesis::output(), Checkpoint::output(), Exodus::outputElementalVariables(), Exodus::outputEmptyTimestep(), Exodus::outputNodalVariables(), and Exodus::outputSetup().

_exec_flags

const std::vector<ExecFlagType> SetupInterface::_exec_flags

protectedinherited

(DEPRECATED) execution flag (when is the object executed/evaluated) TODO: ExecFlagType

Definition at line 96 of file SetupInterface.h.

Referenced by SetupInterface::execBitFlags(), MultiAppTransfer::execFlags(), and SetupInterface::execFlags().

_execute_enum

const ExecFlagEnum& SetupInterface::_execute_enum

protectedinherited

Execute settings for this oejct.

Definition at line 93 of file SetupInterface.h.

Referenced by ChangeOverTimePostprocessor::ChangeOverTimePostprocessor(), and SetupInterface::getExecuteOnEnum().

_execute_on

ExecFlagEnum Output::_execute_on

protectedinherited

The common Execution types; this is used as the default execution type for everything except system information and input.

Definition at line 187 of file Output.h.

Referenced by AdvancedOutput::AdvancedOutput(), Console::Console(), Output::executeOn(), AdvancedOutput::initExecutionTypes(), Console::initialSetup(), Output::Output(), Console::output(), PetscOutput::PetscOutput(), PerfGraphOutput::shouldOutput(), Output::shouldOutput(), and PetscOutput::solveSetup().

_file_base

std::string FileOutput::_file_base

protectedinherited

The base filename from the input paramaters.

Definition at line 72 of file FileOutput.h.

Referenced by FileOutput::checkFilename(), Checkpoint::directory(), filename(), FileOutput::filename(), VTKOutput::filename(), GMVOutput::filename(), Tecplot::filename(), XDA::filename(), SolutionHistory::filename(), Gnuplot::filename(), CSV::filename(), Console::filename(), Nemesis::filename(), Exodus::filename(), FileOutput::FileOutput(), CSV::getVectorPostprocessorFileName(), CSV::getVectorPostprocessorFilePrefix(), CSV::initialSetup(), PNGOutput::makePNG(), and OversampleOutput::OversampleOutput().

_file_num

unsigned int& FileOutput::_file_num

protectedinherited

A file number counter, initialized to 0 (this must be controlled by the child class, see Exodus)

Definition at line 75 of file FileOutput.h.

Referenced by filename(), VTKOutput::filename(), XDA::filename(), Tecplot::filename(), GMVOutput::filename(), Exodus::filename(), FileOutput::FileOutput(), FileOutput::getFileNumber(), GMVOutput::output(), Tecplot::output(), XDA::output(), VTKOutput::output(), Gnuplot::output(), Exodus::outputSetup(), FileOutput::setFileNumber(), and writeStreamToFile().

_file_output_stream

std::stringstream DOFMapOutput::_file_output_stream

protected

Stream for storing information to be written to a file.

Definition at line 76 of file DOFMapOutput.h.

Referenced by output(), and writeStreamToFile().

_initialized

bool Output::_initialized

protectedinherited

True if init() has been called.

Definition at line 232 of file Output.h.

Referenced by AdvancedOutput::hasOutputHelper(), Output::initialSetup(), AdvancedOutput::initialSetup(), and Console::output().

_interval

const unsigned int Output::_interval

protectedinherited

The output time step interval.

Definition at line 208 of file Output.h.

Referenced by Output::onInterval().

_is_advanced

bool Output::_is_advanced

protectedinherited

Flag for advanced output testing.

Definition at line 238 of file Output.h.

Referenced by AdvancedOutput::AdvancedOutput(), and Output::isAdvanced().

_linear_dt

Real PetscOutput::_linear_dt

privateinherited

Psuedo linear time step.

Definition at line 87 of file PetscOutput.h.

Referenced by PetscOutput::petscLinearOutput(), and PetscOutput::solveSetup().

_linear_dt_divisor

Real PetscOutput::_linear_dt_divisor

privateinherited

Pseudo linear timestep divisor.

Definition at line 99 of file PetscOutput.h.

Referenced by PetscOutput::solveSetup().

_linear_end_time

Real PetscOutput::_linear_end_time

privateinherited

Linear residual output end time.

Definition at line 111 of file PetscOutput.h.

Referenced by PetscOutput::PetscOutput(), and PetscOutput::solveSetup().

_linear_iter

PetscInt PetscOutput::_linear_iter

protectedinherited

Current linear iteration returned from PETSc.

Definition at line 53 of file PetscOutput.h.

Referenced by Console::output(), and PetscOutput::petscLinearOutput().

_linear_start_time

Real PetscOutput::_linear_start_time

privateinherited

Linear residual output start time.

Definition at line 105 of file PetscOutput.h.

Referenced by PetscOutput::PetscOutput(), and PetscOutput::solveSetup().

_linear_time

Real PetscOutput::_linear_time

privateinherited

Psuedo linear time.

Definition at line 84 of file PetscOutput.h.

Referenced by PetscOutput::petscLinearOutput(), PetscOutput::petscNonlinearOutput(), and PetscOutput::time().

_mci_feproblem

FEProblemBase& MeshChangedInterface::_mci_feproblem

protectedinherited

Reference to FEProblemBase instance.

Definition at line 43 of file MeshChangedInterface.h.

Referenced by MeshChangedInterface::MeshChangedInterface().

_mesh

MooseMesh& DOFMapOutput::_mesh

protected

Reference to the mesh object.

Definition at line 82 of file DOFMapOutput.h.

Referenced by output().

_mesh_ptr

MooseMesh* Output::_mesh_ptr

protectedinherited

A convenience pointer to the current mesh (reference or displaced depending on "use_displaced")

Definition at line 181 of file Output.h.

Referenced by OversampleOutput::cloneMesh(), OversampleOutput::initOversample(), Tecplot::output(), XDA::output(), PNGOutput::output(), Output::Output(), Exodus::outputSetup(), and OversampleOutput::updateOversample().

_name

const std::string& MooseObject::_name

protectedinherited

The name of this object, reference to value stored in InputParameters.

Definition at line 178 of file MooseObject.h.

Referenced by ADPiecewiseLinearInterpolationMaterial< compute_stage >::ADPiecewiseLinearInterpolationMaterial(), PiecewiseBase::buildFromFile(), PiecewiseBase::buildFromXY(), PiecewiseLinearBase::buildInterpolation(), CentroidMultiApp::fillPositions(), MultiApp::fillPositions(), FunctionDT::FunctionDT(), MooseObject::name(), PiecewiseBilinear::parse(), PiecewiseBase::PiecewiseBase(), PiecewiseBilinear::PiecewiseBilinear(), PiecewiseLinearInterpolationMaterial::PiecewiseLinearInterpolationMaterial(), DerivativeParsedMaterialHelper::recurseDerivative(), PiecewiseBase::setData(), Split::setup(), and VectorPostprocessorFunction::VectorPostprocessorFunction().

_nonlinear_dt

Real PetscOutput::_nonlinear_dt

privateinherited

The pseuedo non-linear time step.

Definition at line 81 of file PetscOutput.h.

Referenced by PetscOutput::petscNonlinearOutput(), and PetscOutput::solveSetup().

_nonlinear_dt_divisor

Real PetscOutput::_nonlinear_dt_divisor

privateinherited

Pseudo non-linear timestep divisor.

Definition at line 96 of file PetscOutput.h.

Referenced by PetscOutput::solveSetup().

_nonlinear_end_time

Real PetscOutput::_nonlinear_end_time

privateinherited

Non-linear residual output end time.

Definition at line 108 of file PetscOutput.h.

Referenced by PetscOutput::PetscOutput(), and PetscOutput::solveSetup().

_nonlinear_iter

PetscInt PetscOutput::_nonlinear_iter

protectedinherited

Current non-linear iteration returned from PETSc.

Definition at line 50 of file PetscOutput.h.

Referenced by Console::output(), and PetscOutput::petscNonlinearOutput().

_nonlinear_start_time

Real PetscOutput::_nonlinear_start_time

privateinherited

Non-linear residual output start time.

Definition at line 102 of file PetscOutput.h.

Referenced by PetscOutput::PetscOutput(), and PetscOutput::solveSetup().

_nonlinear_time

Real PetscOutput::_nonlinear_time

privateinherited

The psuedo non-linear time.

Definition at line 78 of file PetscOutput.h.

Referenced by PetscOutput::petscNonlinearOutput(), PetscOutput::solveSetup(), and PetscOutput::time().

_norm

Real PetscOutput::_norm

protectedinherited

Current norm returned from PETSc.

Definition at line 47 of file PetscOutput.h.

Referenced by Console::output(), PetscOutput::petscLinearOutput(), and PetscOutput::petscNonlinearOutput().

_num

unsigned int Output::_num

protectedinherited

The number of outputs written.

Definition at line 205 of file Output.h.

_on_linear_residual

bool PetscOutput::_on_linear_residual

privateinherited

True if current output calls is on the linear residual (used by time())

Definition at line 90 of file PetscOutput.h.

Referenced by PetscOutput::petscLinearOutput(), and PetscOutput::time().

_on_nonlinear_residual

bool PetscOutput::_on_nonlinear_residual

privateinherited

True if current output call is on the non-linear residual (used by time())

Definition at line 93 of file PetscOutput.h.

Referenced by PetscOutput::petscNonlinearOutput(), and PetscOutput::time().

_output_if_base_contains

std::vector<std::string> FileOutput::_output_if_base_contains

protectedinherited

Storage for 'output_if_base_contains'.

Definition at line 81 of file FileOutput.h.

Referenced by FileOutput::checkFilename().

_output_step_timer

PerfID Output::_output_step_timer

protectedinherited

Timers.

Definition at line 247 of file Output.h.

Referenced by OversampleOutput::outputStep(), and Output::outputStep().

_padding

unsigned int FileOutput::_padding

protectedinherited

Number of digits to pad the extensions.

Definition at line 78 of file FileOutput.h.

Referenced by VTKOutput::filename(), XDA::filename(), Tecplot::filename(), GMVOutput::filename(), Checkpoint::filename(), Nemesis::filename(), Exodus::filename(), and CSV::getVectorPostprocessorFileName().

_pars

const InputParameters& MooseObject::_pars

protectedinherited

Parameters of this object, references the InputParameters stored in the InputParametersWarehouse.

Definition at line 169 of file MooseObject.h.

Referenced by GridPartitioner::_do_partition(), BreakMeshByBlockGeneratorBase::BreakMeshByBlockGeneratorBase(), PNGOutput::calculateRescalingValues(), BreakMeshByBlockBase::checkInputParameter(), RandomPartitioner::clone(), PetscExternalPartitioner::clone(), BlockWeightedPartitioner::clone(), GridPartitioner::clone(), Console::Console(), Eigenvalue::execute(), Executioner::Executioner(), FEProblemSolve::FEProblemSolve(), FunctionMaterialBase::FunctionMaterialBase(), ParsedMaterialHelper::functionParse(), ExtraNodesetGenerator::generate(), MooseObject::getParamTempl(), GeneralUserObject::getPostprocessorValue(), InitialConditionBase::getUserObjectBase(), InitialConditionBase::getUserObjectTempl(), GeneralUserObject::getVectorPostprocessorValue(), Transient::init(), AdvancedOutput::initExecutionTypes(), Console::initialSetup(), MooseObject::isParamValid(), AddExtraNodeset::modify(), MooseObject::paramErrorMsg(), MooseObject::parameters(), MooseMesh::setPartitionerHelper(), and Transient::setupTimeIntegrator().

_perf_graph

PerfGraph& PerfGraphInterface::_perf_graph

protectedinherited

The performance graph to add to.

Definition at line 67 of file PerfGraphInterface.h.

Referenced by PerfGraphData::getValue(), and PerfGraphInterface::registerTimedSection().

_pg_params

const InputParameters* PerfGraphInterface::_pg_params

protectedinherited

Params.

Definition at line 64 of file PerfGraphInterface.h.

_prefix

std::string PerfGraphInterface::_prefix

protectedinherited

A prefix to use for all sections.

Definition at line 70 of file PerfGraphInterface.h.

Referenced by PerfGraphInterface::registerTimedSection().

_problem_ptr

FEProblemBase* Output::_problem_ptr

protectedinherited

Pointer the the FEProblemBase object for output object (use this)

Definition at line 169 of file Output.h.

Referenced by PNGOutput::calculateRescalingValues(), AdvancedOutput::initAvailableLists(), Console::initialSetup(), OversampleOutput::initOversample(), AdvancedOutput::initPostprocessorOrVectorPostprocessorLists(), AdvancedOutput::initShowHideLists(), PNGOutput::makeMeshFunc(), Nemesis::meshChanged(), Console::meshChanged(), output(), VariableResidualNormsDebugOutput::output(), SolutionHistory::output(), CSV::output(), Output::Output(), TopResidualDebugOutput::output(), TableOutput::outputPostprocessors(), Nemesis::outputPostprocessors(), Exodus::outputPostprocessors(), TableOutput::outputScalarVariables(), Nemesis::outputScalarVariables(), Exodus::outputScalarVariables(), Console::outputSystemInformation(), TableOutput::outputVectorPostprocessors(), MaterialPropertyDebugOutput::printMaterialMap(), TopResidualDebugOutput::printTopResiduals(), PetscOutput::solveSetup(), OversampleOutput::updateOversample(), and Console::writeVariableNorms().

_restartable_app

MooseApp& Restartable::_restartable_app

privateinherited

Reference to the application.

Definition at line 208 of file Restartable.h.

Referenced by Restartable::registerRestartableDataOnApp(), and Restartable::registerRestartableNameWithFilterOnApp().

_restartable_name

std::string Restartable::_restartable_name

privateinherited

The name of the object.

Definition at line 211 of file Restartable.h.

Referenced by Restartable::declareRecoverableData(), Restartable::declareRestartableDataWithContext(), and Restartable::declareRestartableDataWithObjectNameWithContext().

_restartable_system_name

std::string Restartable::_restartable_system_name

privateinherited

The system name this object is in.

Definition at line 214 of file Restartable.h.

Referenced by Restartable::declareRecoverableData(), and Restartable::declareRestartableDataWithContext().

_restartable_tid

THREAD_ID Restartable::_restartable_tid

privateinherited

The thread ID for this object.

Definition at line 217 of file Restartable.h.

Referenced by Restartable::declareRestartableDataWithContext().

_sequence

bool Output::_sequence

protectedinherited

Flag for forcing call to outputSetup() with every call to output() (restartable)

Definition at line 184 of file Output.h.

_start_step

int Output::_start_step

protectedinherited

Start outputting at this time step.

Definition at line 220 of file Output.h.

Referenced by Output::onInterval().

_start_time

Real Output::_start_time

protectedinherited

Start outputting time.

Definition at line 214 of file Output.h.

Referenced by Output::onInterval().

_sync_only

bool Output::_sync_only

protectedinherited

Flag for only executing at sync times.

Definition at line 229 of file Output.h.

Referenced by Output::onInterval().

_sync_times

std::set<Real> Output::_sync_times

protectedinherited

Sync times for this outputter.

Definition at line 211 of file Output.h.

Referenced by Output::onInterval().

_system_name

std::string DOFMapOutput::_system_name

protected

The name of the system to extract DOF information.

Definition at line 79 of file DOFMapOutput.h.

Referenced by output().

_t_step

int& Output::_t_step

protectedinherited

The current time step.

Definition at line 196 of file Output.h.

Referenced by PNGOutput::makePNG(), Output::onInterval(), Console::output(), TableOutput::outputVectorPostprocessors(), Output::time(), Output::timeOld(), and Output::timeStep().

_t_tol

Real Output::_t_tol

protectedinherited

Time checking tolerance.

Definition at line 226 of file Output.h.

Referenced by PetscOutput::solveSetup().

_time

Real& Output::_time

protectedinherited

The current time for output purposes.

Definition at line 190 of file Output.h.

Referenced by PNGOutput::makePNG(), Output::onInterval(), AdvancedOutput::output(), TableOutput::outputVectorPostprocessors(), PetscOutput::solveSetup(), Output::time(), and AdvancedOutput::wantOutput().

_time_old

Real& Output::_time_old

protectedinherited

The old time.

Definition at line 193 of file Output.h.

Referenced by PetscOutput::solveSetup(), and Output::timeOld().

_transient

bool Output::_transient

protectedinherited

Transient flag (true = transient)

Definition at line 172 of file Output.h.

Referenced by Output::dt(), Output::dtOld(), Output::time(), Output::timeOld(), and Console::writeTimestepInformation().

_type

const std::string& MooseObject::_type

protectedinherited

The type of this object (the Class name)

Definition at line 175 of file MooseObject.h.

Referenced by FEProblemBase::init(), and MooseObject::type().

_use_displaced

bool Output::_use_displaced

protectedinherited

Flag for using displaced mesh.

Definition at line 175 of file Output.h.

Referenced by Output::Output().

_write_file

bool DOFMapOutput::_write_file

protected

Flag for controlling outputting console information to a file.

Definition at line 70 of file DOFMapOutput.h.

Referenced by output().

_write_screen

bool DOFMapOutput::_write_screen

protected

Flag for controlling outputting console information to screen.

Definition at line 73 of file DOFMapOutput.h.

Referenced by output().

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The documentation for this class was generated from the following files:

• include/outputs/DOFMapOutput.h
• src/outputs/DOFMapOutput.C