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PorousFlowPorosityHMBiotModulus Class Reference

This Matrial evolves porosity so that the PorousFlow equations match the standard equations of poroelasticity theory with a constant BiotModulus. More...

#include <PorousFlowPorosityHMBiotModulus.h>

Inheritance diagram for PorousFlowPorosityHMBiotModulus:
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Public Member Functions

 PorousFlowPorosityHMBiotModulus (const InputParameters &parameters)
 

Protected Member Functions

virtual void computeQpProperties () override
 
virtual Real atNegInfinityQp () const override
 Returns "a" at the quadpoint (porosity = a + (b - a) * exp(decay)) More...
 
virtual Real datNegInfinityQp (unsigned pvar) const override
 d(a)/d(PorousFlow variable pvar) More...
 
virtual Real atZeroQp () const override
 Returns "b" at the quadpoint (porosity = a + (b - a) * exp(decay)) More...
 
virtual Real datZeroQp (unsigned pvar) const override
 d(a)/d(PorousFlow variable pvar) More...
 
virtual Real decayQp () const override
 Returns "decay" at the quadpoint (porosity = a + (b - a) * exp(decay)) More...
 
virtual Real ddecayQp_dvar (unsigned pvar) const override
 d(decay)/d(PorousFlow variable pvar) More...
 
virtual RealGradient ddecayQp_dgradvar (unsigned pvar) const override
 d(decay)/d(grad(PorousFlow variable pvar)) More...
 
virtual void initQpStatefulProperties () override
 

Protected Attributes

const MaterialProperty< Real > & _porosity_old
 Old value of porosity. More...
 
const Real _biot_modulus
 Constant biot modulus. More...
 
const Real _fluid_bulk_modulus
 Constant fluid bulk modulus. More...
 
const MaterialProperty< Real > & _pf_old
 Old value of effective fluid pressure. More...
 
const MaterialProperty< Real > & _vol_strain_qp_old
 Old value of total volumetric strain. More...
 
const MaterialProperty< Real > & _vol_strain_rate_qp
 Volumetric strain rate. More...
 
const MaterialProperty< std::vector< RealGradient > > & _dvol_strain_rate_qp_dvar
 d(volumetric strain rate)/d(PorousFlow variable) More...
 
const bool _mechanical
 Porosity is a function of volumetric strain. More...
 
const bool _fluid
 Porosity is a function of effective porepressure. More...
 
const bool _thermal
 Porosity is a function of temperature. More...
 
const bool _chemical
 Porosity is a function of chemistry. More...
 
const VariableValue & _phi0
 Porosity at zero strain and zero porepressure and zero temperature. More...
 
const Real _biot
 Biot coefficient. More...
 
const Real _exp_coeff
 Thermal expansion coefficient of the solid porous skeleton. More...
 
const Real _solid_bulk
 Drained bulk modulus of the porous skeleton. More...
 
const Real _coeff
 Short-hand number (biot-1)/solid_bulk. More...
 
const VariableValue & _t_reference
 Reference temperature. More...
 
const VariableValue & _p_reference
 Reference porepressure. More...
 
const unsigned _num_c_ref
 Number of reference mineral concentrations provided by user. More...
 
std::vector< const VariableValue * > _c_reference
 Reference mineral concentrations. More...
 
const unsigned _num_initial_c
 Number of reference mineral concentrations provided by user. More...
 
std::vector< const VariableValue * > _initial_c
 Reference mineral concentrations. More...
 
std::vector< Real > _c_weights
 Weights for the mineral concentrations. More...
 
const MaterialProperty< Real > *const _vol_strain_qp
 Strain (first const means we never want to dereference and change the value, second means we'll always be pointing to the same address after initialization (like a reference)) More...
 
const MaterialProperty< std::vector< RealGradient > > *const _dvol_strain_qp_dvar
 d(strain)/(dvar) (first const means we never want to dereference and change the value, second means we'll always be pointing to the same address after initialization (like a reference)) More...
 
const MaterialProperty< Real > *const _pf
 Effective porepressure at the quadpoints or nodes. More...
 
const MaterialProperty< std::vector< Real > > *const _dpf_dvar
 d(effective porepressure)/(d porflow variable) More...
 
const MaterialProperty< Real > *const _temperature
 Temperature at the quadpoints or nodes. More...
 
const MaterialProperty< std::vector< Real > > *const _dtemperature_dvar
 d(temperature)/(d porflow variable) More...
 
const MaterialProperty< std::vector< Real > > *const _mineral_conc_old
 Old value of mineral concentration at the quadpoints or nodes. More...
 
const MaterialProperty< std::vector< Real > > *const _reaction_rate
 Reaction rate of mineralisation. More...
 
const MaterialProperty< std::vector< std::vector< Real > > > *const _dreaction_rate_dvar
 d(reaction_rate_conc)/d(porflow variable) More...
 
const unsigned int _aq_ph
 Aqueous phase number. More...
 
const MaterialProperty< std::vector< Real > > *const _saturation
 Saturation. More...
 
const MaterialProperty< std::vector< std::vector< Real > > > *const _dsaturation_dvar
 d(saturation)/d(PorousFlow var) More...
 
const bool _strain_at_nearest_qp
 When calculating nodal porosity, use the strain at the nearest quadpoint to the node. More...
 
const bool _ensure_positive
 for decayQp() > 0, porosity can be negative when using porosity = a + (b - a) * exp(decay). More...
 
MaterialProperty< Real > & _porosity
 Computed porosity at the nodes or quadpoints. More...
 
MaterialProperty< std::vector< Real > > & _dporosity_dvar
 d(porosity)/d(PorousFlow variable) More...
 
MaterialProperty< std::vector< RealGradient > > & _dporosity_dgradvar
 d(porosity)/d(grad PorousFlow variable) More...
 
const unsigned int _num_phases
 Number of phases. More...
 
const unsigned int _num_components
 Number of fluid components. More...
 
const unsigned int _num_var
 Number of PorousFlow variables. More...
 

Detailed Description

This Matrial evolves porosity so that the PorousFlow equations match the standard equations of poroelasticity theory with a constant BiotModulus.

Even though a constant BiotModulus is not strictly correct, many analytical solutions of poroelasticity theory assume this, so PorousFlowPorosityHMBiotModulus is useful for comparing with those solutions. Otherwise it shouldn't generally be used because PorousFlowPorosity is physically more correct.

Definition at line 28 of file PorousFlowPorosityHMBiotModulus.h.

Constructor & Destructor Documentation

◆ PorousFlowPorosityHMBiotModulus()

PorousFlowPorosityHMBiotModulus::PorousFlowPorosityHMBiotModulus ( const InputParameters &  parameters)

Definition at line 36 of file PorousFlowPorosityHMBiotModulus.C.

37  : PorousFlowPorosity(parameters),
38  _porosity_old(_nodal_material ? getMaterialPropertyOld<Real>("PorousFlow_porosity_nodal")
39  : getMaterialPropertyOld<Real>("PorousFlow_porosity_qp")),
40  _biot_modulus(getParam<Real>("constant_biot_modulus")),
41  _fluid_bulk_modulus(getParam<Real>("constant_fluid_bulk_modulus")),
42  _pf_old(_nodal_material
43  ? getMaterialPropertyOld<Real>("PorousFlow_effective_fluid_pressure_nodal")
44  : getMaterialPropertyOld<Real>("PorousFlow_effective_fluid_pressure_qp")),
45  _vol_strain_qp_old(getMaterialPropertyOld<Real>("PorousFlow_total_volumetric_strain_qp")),
46  _vol_strain_rate_qp(getMaterialProperty<Real>("PorousFlow_volumetric_strain_rate_qp")),
47  _dvol_strain_rate_qp_dvar(getMaterialProperty<std::vector<RealGradient>>(
48  "dPorousFlow_volumetric_strain_rate_qp_dvar"))
49 {
50 }

Member Function Documentation

◆ atNegInfinityQp()

Real PorousFlowPorosity::atNegInfinityQp ( ) const
overrideprotectedvirtualinherited

Returns "a" at the quadpoint (porosity = a + (b - a) * exp(decay))

Implements PorousFlowPorosityExponentialBase.

Definition at line 178 of file PorousFlowPorosity.C.

179 {
180  /*
181  *
182  * Note the use of the OLD value of porosity here.
183  * This strategy, which breaks the cyclic dependency between porosity
184  * and mineral concentration, is used in
185  * Kernel: PorousFlowPreDis
186  * Material: PorousFlowPorosity
187  * Material: PorousFlowAqueousPreDisChemistry
188  * Material: PorousFlowAqueousPreDisMineral
189  *
190  */
191  Real result = _biot;
192  if (_chemical)
193  {
194  if (_t_step == 0 && !_app.isRestarting())
195  for (unsigned i = 0; i < _num_c_ref; ++i)
196  result -= _c_weights[i] * (*_initial_c[i])[_qp];
197  else
198  for (unsigned i = 0; i < _num_c_ref; ++i)
199  result -= _c_weights[i] * ((*_mineral_conc_old)[_qp][i] + _dt * (*_porosity_old)[_qp] *
200  (*_saturation)[_qp][_aq_ph] *
201  (*_reaction_rate)[_qp][i]);
202  }
203  return result;
204 }

◆ atZeroQp()

Real PorousFlowPorosity::atZeroQp ( ) const
overrideprotectedvirtualinherited

Returns "b" at the quadpoint (porosity = a + (b - a) * exp(decay))

Implements PorousFlowPorosityExponentialBase.

Definition at line 219 of file PorousFlowPorosity.C.

220 {
221  // note the [0] below: _phi0 is a constant monomial and we use [0] regardless of _nodal_material
222  Real result = _phi0[0];
223  if (_chemical)
224  {
225  if (_t_step == 0 && !_app.isRestarting())
226  for (unsigned i = 0; i < _num_c_ref; ++i)
227  result -= _c_weights[i] * ((*_initial_c[i])[_qp] - (*_c_reference[i])[_qp]);
228  else
229  for (unsigned i = 0; i < _num_c_ref; ++i)
230  result -= _c_weights[i] * ((*_mineral_conc_old)[_qp][i] +
231  _dt * (*_porosity_old)[_qp] * (*_saturation)[_qp][_aq_ph] *
232  (*_reaction_rate)[_qp][i] -
233  (*_c_reference[i])[_qp]);
234  }
235  return result;
236 }

◆ computeQpProperties()

void PorousFlowPorosityHMBiotModulus::computeQpProperties ( )
overrideprotectedvirtual

Reimplemented from PorousFlowPorosityExponentialBase.

Definition at line 53 of file PorousFlowPorosityHMBiotModulus.C.

54 {
55  // Note that in the following _strain[_qp] is evaluated at q quadpoint
56  // So _porosity_nodal[_qp], which should be the nodal value of porosity
57  // actually uses the strain at a quadpoint. This
58  // is OK for LINEAR elements, as strain is constant over the element anyway.
59 
60  const unsigned qp_to_use =
61  (_nodal_material && (_bnd || _strain_at_nearest_qp) ? nearestQP(_qp) : _qp);
62 
63  const Real denom = 1.0 + _vol_strain_rate_qp[qp_to_use] * _dt;
64  _porosity[_qp] =
65  (_porosity_old[_qp] * std::exp(-((*_pf)[_qp] - _pf_old[_qp]) / _fluid_bulk_modulus) +
66  ((*_pf)[_qp] - _pf_old[_qp]) / _biot_modulus +
67  _biot * ((*_vol_strain_qp)[qp_to_use] - _vol_strain_qp_old[qp_to_use])) /
68  denom;
69 
70  _dporosity_dvar[_qp].resize(_num_var);
71  for (unsigned int v = 0; v < _num_var; ++v)
72  _dporosity_dvar[_qp][v] =
73  (*_dpf_dvar)[_qp][v] *
74  (-_porosity_old[_qp] * std::exp(-((*_pf)[_qp] - _pf_old[_qp]) / _fluid_bulk_modulus) /
75  _fluid_bulk_modulus +
76  1.0 / _biot_modulus) /
77  denom;
78 
79  _dporosity_dgradvar[_qp].resize(_num_var);
80  for (unsigned int v = 0; v < _num_var; ++v)
81  _dporosity_dgradvar[_qp][v] =
82  _biot * (*_dvol_strain_qp_dvar)[qp_to_use][v] / denom -
83  _porosity[_qp] / denom * _dvol_strain_rate_qp_dvar[qp_to_use][v] * _dt;
84 }

◆ datNegInfinityQp()

Real PorousFlowPorosity::datNegInfinityQp ( unsigned  pvar) const
overrideprotectedvirtualinherited

d(a)/d(PorousFlow variable pvar)

Implements PorousFlowPorosityExponentialBase.

Definition at line 207 of file PorousFlowPorosity.C.

208 {
209  Real result = 0.0;
210  if (_chemical && (_t_step >= 1 || _app.isRestarting()))
211  for (unsigned i = 0; i < _num_c_ref; ++i)
212  result -= _c_weights[i] * _dt * (*_porosity_old)[_qp] *
213  ((*_saturation)[_qp][_aq_ph] * (*_dreaction_rate_dvar)[_qp][i][pvar] +
214  (*_dsaturation_dvar)[_qp][_aq_ph][pvar] * (*_reaction_rate)[_qp][i]);
215  return result;
216 }

◆ datZeroQp()

Real PorousFlowPorosity::datZeroQp ( unsigned  pvar) const
overrideprotectedvirtualinherited

d(a)/d(PorousFlow variable pvar)

Implements PorousFlowPorosityExponentialBase.

Definition at line 239 of file PorousFlowPorosity.C.

240 {
241  Real result = 0.0;
242  if (_chemical && (_t_step >= 1 || _app.isRestarting()))
243  for (unsigned i = 0; i < _num_c_ref; ++i)
244  result -= _c_weights[i] * _dt * (*_porosity_old)[_qp] *
245  ((*_saturation)[_qp][_aq_ph] * (*_dreaction_rate_dvar)[_qp][i][pvar] +
246  (*_dsaturation_dvar)[_qp][_aq_ph][pvar] * (*_reaction_rate)[_qp][i]);
247  return result;
248 }

◆ ddecayQp_dgradvar()

RealGradient PorousFlowPorosity::ddecayQp_dgradvar ( unsigned  pvar) const
overrideprotectedvirtualinherited

d(decay)/d(grad(PorousFlow variable pvar))

Implements PorousFlowPorosityExponentialBase.

Definition at line 290 of file PorousFlowPorosity.C.

291 {
292  RealGradient result(0.0, 0.0, 0.0);
293  if (_mechanical)
294  {
295  const unsigned qp_to_use =
296  (_nodal_material && (_bnd || _strain_at_nearest_qp) ? nearestQP(_qp) : _qp);
297  result += -(*_dvol_strain_qp_dvar)[qp_to_use][pvar];
298  }
299  return result;
300 }

◆ ddecayQp_dvar()

Real PorousFlowPorosity::ddecayQp_dvar ( unsigned  pvar) const
overrideprotectedvirtualinherited

d(decay)/d(PorousFlow variable pvar)

Implements PorousFlowPorosityExponentialBase.

Definition at line 276 of file PorousFlowPorosity.C.

277 {
278  Real result = 0.0;
279 
280  if (_thermal)
281  result += _exp_coeff * (*_dtemperature_dvar)[_qp][pvar];
282 
283  if (_fluid)
284  result += _coeff * (*_dpf_dvar)[_qp][pvar];
285 
286  return result;
287 }

◆ decayQp()

Real PorousFlowPorosity::decayQp ( ) const
overrideprotectedvirtualinherited

Returns "decay" at the quadpoint (porosity = a + (b - a) * exp(decay))

Implements PorousFlowPorosityExponentialBase.

Definition at line 251 of file PorousFlowPorosity.C.

252 {
253  Real result = 0.0;
254 
255  if (_thermal)
256  result += _exp_coeff * ((*_temperature)[_qp] - _t_reference[_qp]);
257 
258  if (_fluid)
259  result += _coeff * ((*_pf)[_qp] - _p_reference[_qp]);
260 
261  if (_mechanical)
262  {
263  // Note that in the following _strain[_qp] is evaluated at q quadpoint
264  // So _porosity_nodal[_qp], which should be the nodal value of porosity
265  // actually uses the strain at a quadpoint. This
266  // is OK for LINEAR elements, as strain is constant over the element anyway.
267  const unsigned qp_to_use =
268  (_nodal_material && (_bnd || _strain_at_nearest_qp) ? nearestQP(_qp) : _qp);
269  result += -(*_vol_strain_qp)[qp_to_use];
270  }
271 
272  return result;
273 }

◆ initQpStatefulProperties()

void PorousFlowPorosityExponentialBase::initQpStatefulProperties ( )
overrideprotectedvirtualinherited

Definition at line 44 of file PorousFlowPorosityExponentialBase.C.

45 {
46  const Real a = atNegInfinityQp();
47  const Real b = atZeroQp();
48  mooseAssert(a > b, "PorousFlowPorosityExponentialBase a must be larger than b");
49  const Real decay = decayQp();
50 
51  if (decay <= 0.0 || !_ensure_positive)
52  _porosity[_qp] = a + (b - a) * std::exp(decay);
53  else
54  {
55  const Real c = std::log(a / (a - b));
56  const Real expx = std::exp(-decay / c);
57  _porosity[_qp] = a + (b - a) * std::exp(c * (1.0 - expx));
58  }
59 }

Member Data Documentation

◆ _aq_ph

const unsigned int PorousFlowPorosity::_aq_ph
protectedinherited

Aqueous phase number.

Definition at line 118 of file PorousFlowPorosity.h.

Referenced by PorousFlowPorosity::atNegInfinityQp(), PorousFlowPorosity::atZeroQp(), PorousFlowPorosity::datNegInfinityQp(), and PorousFlowPorosity::datZeroQp().

◆ _biot

const Real PorousFlowPorosity::_biot
protectedinherited

Biot coefficient.

Definition at line 55 of file PorousFlowPorosity.h.

Referenced by PorousFlowPorosity::atNegInfinityQp(), and computeQpProperties().

◆ _biot_modulus

const Real PorousFlowPorosityHMBiotModulus::_biot_modulus
protected

Constant biot modulus.

Definition at line 40 of file PorousFlowPorosityHMBiotModulus.h.

Referenced by computeQpProperties().

◆ _c_reference

std::vector<const VariableValue *> PorousFlowPorosity::_c_reference
protectedinherited

Reference mineral concentrations.

Definition at line 76 of file PorousFlowPorosity.h.

Referenced by PorousFlowPorosity::atZeroQp(), and PorousFlowPorosity::PorousFlowPorosity().

◆ _c_weights

std::vector<Real> PorousFlowPorosity::_c_weights
protectedinherited

Weights for the mineral concentrations.

Definition at line 85 of file PorousFlowPorosity.h.

Referenced by PorousFlowPorosity::atNegInfinityQp(), PorousFlowPorosity::atZeroQp(), PorousFlowPorosity::datNegInfinityQp(), PorousFlowPorosity::datZeroQp(), and PorousFlowPorosity::PorousFlowPorosity().

◆ _chemical

const bool PorousFlowPorosity::_chemical
protectedinherited

Porosity is a function of chemistry.

Definition at line 49 of file PorousFlowPorosity.h.

Referenced by PorousFlowPorosity::atNegInfinityQp(), PorousFlowPorosity::atZeroQp(), PorousFlowPorosity::datNegInfinityQp(), PorousFlowPorosity::datZeroQp(), and PorousFlowPorosity::PorousFlowPorosity().

◆ _coeff

const Real PorousFlowPorosity::_coeff
protectedinherited

Short-hand number (biot-1)/solid_bulk.

Definition at line 64 of file PorousFlowPorosity.h.

Referenced by PorousFlowPorosity::ddecayQp_dvar(), and PorousFlowPorosity::decayQp().

◆ _dpf_dvar

const MaterialProperty<std::vector<Real> >* const PorousFlowPorosity::_dpf_dvar
protectedinherited

d(effective porepressure)/(d porflow variable)

Definition at line 100 of file PorousFlowPorosity.h.

Referenced by computeQpProperties().

◆ _dporosity_dgradvar

MaterialProperty<std::vector<RealGradient> >& PorousFlowPorosityBase::_dporosity_dgradvar
protectedinherited

d(porosity)/d(grad PorousFlow variable)

Definition at line 35 of file PorousFlowPorosityBase.h.

Referenced by PorousFlowPorosityConst::computeQpProperties(), computeQpProperties(), and PorousFlowPorosityExponentialBase::computeQpProperties().

◆ _dporosity_dvar

MaterialProperty<std::vector<Real> >& PorousFlowPorosityBase::_dporosity_dvar
protectedinherited

d(porosity)/d(PorousFlow variable)

Definition at line 32 of file PorousFlowPorosityBase.h.

Referenced by PorousFlowPorosityConst::computeQpProperties(), computeQpProperties(), and PorousFlowPorosityExponentialBase::computeQpProperties().

◆ _dreaction_rate_dvar

const MaterialProperty<std::vector<std::vector<Real> > >* const PorousFlowPorosity::_dreaction_rate_dvar
protectedinherited

d(reaction_rate_conc)/d(porflow variable)

Definition at line 115 of file PorousFlowPorosity.h.

◆ _dsaturation_dvar

const MaterialProperty<std::vector<std::vector<Real> > >* const PorousFlowPorosity::_dsaturation_dvar
protectedinherited

d(saturation)/d(PorousFlow var)

Definition at line 124 of file PorousFlowPorosity.h.

◆ _dtemperature_dvar

const MaterialProperty<std::vector<Real> >* const PorousFlowPorosity::_dtemperature_dvar
protectedinherited

d(temperature)/(d porflow variable)

Definition at line 106 of file PorousFlowPorosity.h.

◆ _dvol_strain_qp_dvar

const MaterialProperty<std::vector<RealGradient> >* const PorousFlowPorosity::_dvol_strain_qp_dvar
protectedinherited

d(strain)/(dvar) (first const means we never want to dereference and change the value, second means we'll always be pointing to the same address after initialization (like a reference))

Definition at line 94 of file PorousFlowPorosity.h.

Referenced by computeQpProperties().

◆ _dvol_strain_rate_qp_dvar

const MaterialProperty<std::vector<RealGradient> >& PorousFlowPorosityHMBiotModulus::_dvol_strain_rate_qp_dvar
protected

d(volumetric strain rate)/d(PorousFlow variable)

Definition at line 55 of file PorousFlowPorosityHMBiotModulus.h.

Referenced by computeQpProperties().

◆ _ensure_positive

const bool PorousFlowPorosityExponentialBase::_ensure_positive
protectedinherited

for decayQp() > 0, porosity can be negative when using porosity = a + (b - a) * exp(decay).

This expression is modified if ensure_positive = true to read porosity = a + (b - a) * exp(c * (1 - Exp(- decay / c))) where c = log(a/(b-a))

Definition at line 76 of file PorousFlowPorosityExponentialBase.h.

Referenced by PorousFlowPorosityExponentialBase::computeQpProperties(), and PorousFlowPorosityExponentialBase::initQpStatefulProperties().

◆ _exp_coeff

const Real PorousFlowPorosity::_exp_coeff
protectedinherited

Thermal expansion coefficient of the solid porous skeleton.

Definition at line 58 of file PorousFlowPorosity.h.

Referenced by PorousFlowPorosity::ddecayQp_dvar(), and PorousFlowPorosity::decayQp().

◆ _fluid

const bool PorousFlowPorosity::_fluid
protectedinherited

Porosity is a function of effective porepressure.

Definition at line 43 of file PorousFlowPorosity.h.

Referenced by PorousFlowPorosity::ddecayQp_dvar(), PorousFlowPorosity::decayQp(), and PorousFlowPorosity::PorousFlowPorosity().

◆ _fluid_bulk_modulus

const Real PorousFlowPorosityHMBiotModulus::_fluid_bulk_modulus
protected

Constant fluid bulk modulus.

Definition at line 43 of file PorousFlowPorosityHMBiotModulus.h.

Referenced by computeQpProperties().

◆ _initial_c

std::vector<const VariableValue *> PorousFlowPorosity::_initial_c
protectedinherited

Reference mineral concentrations.

Definition at line 82 of file PorousFlowPorosity.h.

Referenced by PorousFlowPorosity::atNegInfinityQp(), PorousFlowPorosity::atZeroQp(), and PorousFlowPorosity::PorousFlowPorosity().

◆ _mechanical

const bool PorousFlowPorosity::_mechanical
protectedinherited

Porosity is a function of volumetric strain.

Definition at line 40 of file PorousFlowPorosity.h.

Referenced by PorousFlowPorosity::ddecayQp_dgradvar(), and PorousFlowPorosity::decayQp().

◆ _mineral_conc_old

const MaterialProperty<std::vector<Real> >* const PorousFlowPorosity::_mineral_conc_old
protectedinherited

Old value of mineral concentration at the quadpoints or nodes.

Definition at line 109 of file PorousFlowPorosity.h.

Referenced by PorousFlowPorosity::atNegInfinityQp(), and PorousFlowPorosity::atZeroQp().

◆ _num_c_ref

const unsigned PorousFlowPorosity::_num_c_ref
protectedinherited

Number of reference mineral concentrations provided by user.

Definition at line 73 of file PorousFlowPorosity.h.

Referenced by PorousFlowPorosity::atNegInfinityQp(), PorousFlowPorosity::atZeroQp(), PorousFlowPorosity::datNegInfinityQp(), PorousFlowPorosity::datZeroQp(), and PorousFlowPorosity::PorousFlowPorosity().

◆ _num_components

const unsigned int PorousFlowMaterialVectorBase::_num_components
protectedinherited

Number of fluid components.

Definition at line 33 of file PorousFlowMaterialVectorBase.h.

Referenced by PorousFlowDiffusivityBase::computeQpProperties(), PorousFlowMassFractionAqueousEquilibriumChemistry::computeQpProperties(), PorousFlowMassFraction::computeQpProperties(), PorousFlowAqueousPreDisChemistry::PorousFlowAqueousPreDisChemistry(), PorousFlowDiffusivityBase::PorousFlowDiffusivityBase(), and PorousFlowMassFraction::PorousFlowMassFraction().

◆ _num_initial_c

const unsigned PorousFlowPorosity::_num_initial_c
protectedinherited

Number of reference mineral concentrations provided by user.

Definition at line 79 of file PorousFlowPorosity.h.

Referenced by PorousFlowPorosity::PorousFlowPorosity().

◆ _num_phases

const unsigned int PorousFlowMaterialVectorBase::_num_phases
protectedinherited

Number of phases.

Definition at line 30 of file PorousFlowMaterialVectorBase.h.

Referenced by PorousFlowDiffusivityBase::computeQpProperties(), PorousFlowDiffusivityMillingtonQuirk::computeQpProperties(), PorousFlowEffectiveFluidPressure::computeQpProperties(), PorousFlowMassFraction::computeQpProperties(), PorousFlowJoiner::computeQpProperties(), PorousFlowEffectiveFluidPressure::initQpStatefulProperties(), PorousFlowJoiner::initQpStatefulProperties(), PorousFlowDiffusivityBase::PorousFlowDiffusivityBase(), PorousFlowDiffusivityConst::PorousFlowDiffusivityConst(), PorousFlowJoiner::PorousFlowJoiner(), PorousFlowMassFraction::PorousFlowMassFraction(), PorousFlowThermalConductivityFromPorosity::PorousFlowThermalConductivityFromPorosity(), PorousFlowThermalConductivityIdeal::PorousFlowThermalConductivityIdeal(), and PorousFlowTotalGravitationalDensityFullySaturatedFromPorosity::PorousFlowTotalGravitationalDensityFullySaturatedFromPorosity().

◆ _num_var

const unsigned int PorousFlowMaterialVectorBase::_num_var
protectedinherited

Number of PorousFlow variables.

Definition at line 36 of file PorousFlowMaterialVectorBase.h.

Referenced by PorousFlowDiffusivityBase::computeQpProperties(), PorousFlowPermeabilityConst::computeQpProperties(), PorousFlowVolumetricStrain::computeQpProperties(), PorousFlowDiffusivityMillingtonQuirk::computeQpProperties(), PorousFlowAqueousPreDisChemistry::computeQpProperties(), PorousFlowThermalConductivityIdeal::computeQpProperties(), PorousFlowEffectiveFluidPressure::computeQpProperties(), PorousFlowPermeabilityTensorFromVar::computeQpProperties(), PorousFlowPorosityConst::computeQpProperties(), PorousFlowMassFractionAqueousEquilibriumChemistry::computeQpProperties(), PorousFlowThermalConductivityFromPorosity::computeQpProperties(), PorousFlowMatrixInternalEnergy::computeQpProperties(), computeQpProperties(), PorousFlowTotalGravitationalDensityFullySaturatedFromPorosity::computeQpProperties(), PorousFlowPermeabilityConstFromVar::computeQpProperties(), PorousFlowPermeabilityExponential::computeQpProperties(), PorousFlowMassFraction::computeQpProperties(), PorousFlowPermeabilityKozenyCarman::computeQpProperties(), PorousFlowJoiner::computeQpProperties(), PorousFlowPorosityExponentialBase::computeQpProperties(), and PorousFlowAqueousPreDisChemistry::initQpStatefulProperties().

◆ _p_reference

const VariableValue& PorousFlowPorosity::_p_reference
protectedinherited

Reference porepressure.

Definition at line 70 of file PorousFlowPorosity.h.

Referenced by PorousFlowPorosity::decayQp().

◆ _pf

const MaterialProperty<Real>* const PorousFlowPorosity::_pf
protectedinherited

Effective porepressure at the quadpoints or nodes.

Definition at line 97 of file PorousFlowPorosity.h.

Referenced by computeQpProperties().

◆ _pf_old

const MaterialProperty<Real>& PorousFlowPorosityHMBiotModulus::_pf_old
protected

Old value of effective fluid pressure.

Definition at line 46 of file PorousFlowPorosityHMBiotModulus.h.

Referenced by computeQpProperties().

◆ _phi0

const VariableValue& PorousFlowPorosity::_phi0
protectedinherited

Porosity at zero strain and zero porepressure and zero temperature.

Definition at line 52 of file PorousFlowPorosity.h.

Referenced by PorousFlowPorosity::atZeroQp().

◆ _porosity

MaterialProperty<Real>& PorousFlowPorosityBase::_porosity
protectedinherited

Computed porosity at the nodes or quadpoints.

Definition at line 29 of file PorousFlowPorosityBase.h.

Referenced by computeQpProperties(), PorousFlowPorosityExponentialBase::computeQpProperties(), PorousFlowPorosityConst::initQpStatefulProperties(), and PorousFlowPorosityExponentialBase::initQpStatefulProperties().

◆ _porosity_old

const MaterialProperty<Real>& PorousFlowPorosityHMBiotModulus::_porosity_old
protected

Old value of porosity.

Definition at line 37 of file PorousFlowPorosityHMBiotModulus.h.

Referenced by computeQpProperties().

◆ _reaction_rate

const MaterialProperty<std::vector<Real> >* const PorousFlowPorosity::_reaction_rate
protectedinherited

Reaction rate of mineralisation.

Definition at line 112 of file PorousFlowPorosity.h.

◆ _saturation

const MaterialProperty<std::vector<Real> >* const PorousFlowPorosity::_saturation
protectedinherited

Saturation.

Definition at line 121 of file PorousFlowPorosity.h.

◆ _solid_bulk

const Real PorousFlowPorosity::_solid_bulk
protectedinherited

Drained bulk modulus of the porous skeleton.

Definition at line 61 of file PorousFlowPorosity.h.

◆ _strain_at_nearest_qp

const bool PorousFlowPorosityExponentialBase::_strain_at_nearest_qp
protectedinherited

When calculating nodal porosity, use the strain at the nearest quadpoint to the node.

Definition at line 67 of file PorousFlowPorosityExponentialBase.h.

Referenced by computeQpProperties(), PorousFlowPorosity::ddecayQp_dgradvar(), and PorousFlowPorosity::decayQp().

◆ _t_reference

const VariableValue& PorousFlowPorosity::_t_reference
protectedinherited

Reference temperature.

Definition at line 67 of file PorousFlowPorosity.h.

Referenced by PorousFlowPorosity::decayQp().

◆ _temperature

const MaterialProperty<Real>* const PorousFlowPorosity::_temperature
protectedinherited

Temperature at the quadpoints or nodes.

Definition at line 103 of file PorousFlowPorosity.h.

◆ _thermal

const bool PorousFlowPorosity::_thermal
protectedinherited

Porosity is a function of temperature.

Definition at line 46 of file PorousFlowPorosity.h.

Referenced by PorousFlowPorosity::ddecayQp_dvar(), PorousFlowPorosity::decayQp(), and PorousFlowPorosity::PorousFlowPorosity().

◆ _vol_strain_qp

const MaterialProperty<Real>* const PorousFlowPorosity::_vol_strain_qp
protectedinherited

Strain (first const means we never want to dereference and change the value, second means we'll always be pointing to the same address after initialization (like a reference))

Definition at line 91 of file PorousFlowPorosity.h.

Referenced by computeQpProperties().

◆ _vol_strain_qp_old

const MaterialProperty<Real>& PorousFlowPorosityHMBiotModulus::_vol_strain_qp_old
protected

Old value of total volumetric strain.

Definition at line 49 of file PorousFlowPorosityHMBiotModulus.h.

Referenced by computeQpProperties().

◆ _vol_strain_rate_qp

const MaterialProperty<Real>& PorousFlowPorosityHMBiotModulus::_vol_strain_rate_qp
protected

Volumetric strain rate.

Definition at line 52 of file PorousFlowPorosityHMBiotModulus.h.

Referenced by computeQpProperties().

The documentation for this class was generated from the following files:
PorousFlowPorosity::_c_weights
std::vector< Real > _c_weights
Weights for the mineral concentrations.
Definition: PorousFlowPorosity.h:85
PorousFlowPorosityExponentialBase::atZeroQp
virtual Real atZeroQp() const =0
Returns "b" at the quadpoint (porosity = a + (b - a) * exp(decay))
PorousFlowPorosity::_chemical
const bool _chemical
Porosity is a function of chemistry.
Definition: PorousFlowPorosity.h:49
PorousFlowPorosity::_mineral_conc_old
const MaterialProperty< std::vector< Real > > *const _mineral_conc_old
Old value of mineral concentration at the quadpoints or nodes.
Definition: PorousFlowPorosity.h:109
PorousFlowPorosity::_dvol_strain_qp_dvar
const MaterialProperty< std::vector< RealGradient > > *const _dvol_strain_qp_dvar
d(strain)/(dvar) (first const means we never want to dereference and change the value,...
Definition: PorousFlowPorosity.h:94
PorousFlowPorosityHMBiotModulus::_porosity_old
const MaterialProperty< Real > & _porosity_old
Old value of porosity.
Definition: PorousFlowPorosityHMBiotModulus.h:37
libMesh::RealGradient
VectorValue< Real > RealGradient
Definition: GrainForceAndTorqueInterface.h:17
PorousFlowPorosity::_vol_strain_qp
const MaterialProperty< Real > *const _vol_strain_qp
Strain (first const means we never want to dereference and change the value, second means we'll alway...
Definition: PorousFlowPorosity.h:91
PorousFlowPorosityBase::_porosity
MaterialProperty< Real > & _porosity
Computed porosity at the nodes or quadpoints.
Definition: PorousFlowPorosityBase.h:29
PorousFlowPorosity::_dpf_dvar
const MaterialProperty< std::vector< Real > > *const _dpf_dvar
d(effective porepressure)/(d porflow variable)
Definition: PorousFlowPorosity.h:100
PorousFlowPorosity::_coeff
const Real _coeff
Short-hand number (biot-1)/solid_bulk.
Definition: PorousFlowPorosity.h:64
PorousFlowPorosityBase::_dporosity_dvar
MaterialProperty< std::vector< Real > > & _dporosity_dvar
d(porosity)/d(PorousFlow variable)
Definition: PorousFlowPorosityBase.h:32
PorousFlowPorosityHMBiotModulus::_pf_old
const MaterialProperty< Real > & _pf_old
Old value of effective fluid pressure.
Definition: PorousFlowPorosityHMBiotModulus.h:46
PorousFlowPorosityExponentialBase::atNegInfinityQp
virtual Real atNegInfinityQp() const =0
Returns "a" at the quadpoint (porosity = a + (b - a) * exp(decay))
PorousFlowPorosity::_fluid
const bool _fluid
Porosity is a function of effective porepressure.
Definition: PorousFlowPorosity.h:43
PorousFlowPorosity::_phi0
const VariableValue & _phi0
Porosity at zero strain and zero porepressure and zero temperature.
Definition: PorousFlowPorosity.h:52
PorousFlowPorosity::_t_reference
const VariableValue & _t_reference
Reference temperature.
Definition: PorousFlowPorosity.h:67
PorousFlowPorosity::_p_reference
const VariableValue & _p_reference
Reference porepressure.
Definition: PorousFlowPorosity.h:70
PorousFlowPorosity::_pf
const MaterialProperty< Real > *const _pf
Effective porepressure at the quadpoints or nodes.
Definition: PorousFlowPorosity.h:97
PorousFlowPorosity::_exp_coeff
const Real _exp_coeff
Thermal expansion coefficient of the solid porous skeleton.
Definition: PorousFlowPorosity.h:58
PorousFlowPorosityHMBiotModulus::_vol_strain_rate_qp
const MaterialProperty< Real > & _vol_strain_rate_qp
Volumetric strain rate.
Definition: PorousFlowPorosityHMBiotModulus.h:52
PorousFlowPorosityHMBiotModulus::_biot_modulus
const Real _biot_modulus
Constant biot modulus.
Definition: PorousFlowPorosityHMBiotModulus.h:40
PorousFlowPorosity::_porosity_old
const MaterialProperty< Real > *const _porosity_old
Old value of porosity.
Definition: PorousFlowPorosity.h:88
PorousFlowPorosity::_aq_ph
const unsigned int _aq_ph
Aqueous phase number.
Definition: PorousFlowPorosity.h:118
PorousFlowPorosityHMBiotModulus::_dvol_strain_rate_qp_dvar
const MaterialProperty< std::vector< RealGradient > > & _dvol_strain_rate_qp_dvar
d(volumetric strain rate)/d(PorousFlow variable)
Definition: PorousFlowPorosityHMBiotModulus.h:55
PorousFlowPorosity::_num_c_ref
const unsigned _num_c_ref
Number of reference mineral concentrations provided by user.
Definition: PorousFlowPorosity.h:73
PorousFlowPorosity::_initial_c
std::vector< const VariableValue * > _initial_c
Reference mineral concentrations.
Definition: PorousFlowPorosity.h:82
PorousFlowPorosity::_thermal
const bool _thermal
Porosity is a function of temperature.
Definition: PorousFlowPorosity.h:46
PorousFlowPorosity::PorousFlowPorosity
PorousFlowPorosity(const InputParameters &parameters)
Definition: PorousFlowPorosity.C:60
PorousFlowPorosity::_c_reference
std::vector< const VariableValue * > _c_reference
Reference mineral concentrations.
Definition: PorousFlowPorosity.h:76
PorousFlowPorosityExponentialBase::_ensure_positive
const bool _ensure_positive
for decayQp() > 0, porosity can be negative when using porosity = a + (b - a) * exp(decay).
Definition: PorousFlowPorosityExponentialBase.h:76
PorousFlowPorosityHMBiotModulus::_fluid_bulk_modulus
const Real _fluid_bulk_modulus
Constant fluid bulk modulus.
Definition: PorousFlowPorosityHMBiotModulus.h:43
PorousFlowPorosityExponentialBase::decayQp
virtual Real decayQp() const =0
Returns "decay" at the quadpoint (porosity = a + (b - a) * exp(decay))
PorousFlowPorosityHMBiotModulus::_vol_strain_qp_old
const MaterialProperty< Real > & _vol_strain_qp_old
Old value of total volumetric strain.
Definition: PorousFlowPorosityHMBiotModulus.h:49
PorousFlowMaterialVectorBase::_num_var
const unsigned int _num_var
Number of PorousFlow variables.
Definition: PorousFlowMaterialVectorBase.h:36
PorousFlowPorosityExponentialBase::_strain_at_nearest_qp
const bool _strain_at_nearest_qp
When calculating nodal porosity, use the strain at the nearest quadpoint to the node.
Definition: PorousFlowPorosityExponentialBase.h:67
PorousFlowPorosity::_biot
const Real _biot
Biot coefficient.
Definition: PorousFlowPorosity.h:55
PorousFlowPorosityBase::_dporosity_dgradvar
MaterialProperty< std::vector< RealGradient > > & _dporosity_dgradvar
d(porosity)/d(grad PorousFlow variable)
Definition: PorousFlowPorosityBase.h:35
PorousFlowPorosity::_mechanical
const bool _mechanical
Porosity is a function of volumetric strain.
Definition: PorousFlowPorosity.h:40
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