splitter.C

Go to the documentation of this file.

// The libMesh Finite Element Library.
// Copyright (C) 2002-2019 Benjamin S. Kirk, John W. Peterson, Roy H. Stogner
 
// This library is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Software Foundation; either
// version 2.1 of the License, or (at your option) any later version.
 
// This library is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
// Lesser General Public License for more details.
 
// You should have received a copy of the GNU Lesser General Public
// License along with this library; if not, write to the Free Software
// Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
 
 
// Read in a Mesh file and write out partitionings of it that are suitable
// for reading into a DistributedMesh
#include "libmesh/libmesh.h"
#include "libmesh/replicated_mesh.h"
#include "libmesh/default_coupling.h"
#include "libmesh/checkpoint_io.h"
#include "libmesh/metis_partitioner.h"
#include "libmesh/getpot.h"
 
using namespace libMesh;
 
// From: http://stackoverflow.com/a/6417908/2042320
std::string remove_extension (const std::string & filename)
{
  size_t lastdot = filename.find_last_of(".");
 
  if (lastdot == std::string::npos)
    return filename;
 
  return filename.substr(0, lastdot);
}
 
int main (int argc, char ** argv)
{
  LibMeshInit init (argc, argv);
 
  if (libMesh::on_command_line("--help") || argc < 3)
    {
      libMesh::out << "Example: " << argv[0] << " --mesh=filename.e --n-procs='4 8 16' "
                                                "[--num-ghost-layers <n>] [--dry-run] [--ascii]\n\n"
                   << "--mesh             Full name of the mesh file to read in. \n"
                   << "--n-procs          Vector of number of processors.\n"
                   << "--num-ghost-layers Number of layers to ghost when partitioning (Default: 1).\n"
                   << "--dry-run          Only test the partitioning, don't write any files.\n"
                   << "--ascii            Write ASCII cpa files rather than binary cpr files.\n"
                   << std::endl;
 
      return 0;
    }
 
  std::string filename = libMesh::command_line_value("--mesh", std::string());
 
  std::vector<processor_id_type> all_n_procs;
  libMesh::command_line_vector("--n-procs", all_n_procs);
 
  unsigned int num_ghost_layers = libMesh::command_line_value("--num-ghost-layers", 1);
 
  ReplicatedMesh mesh(init.comm());
 
  // If the user has requested additional ghosted layers, we need to add a ghosting functor.
  DefaultCoupling default_coupling;
  if (num_ghost_layers > 1)
    {
      default_coupling.set_n_levels(num_ghost_layers);
      mesh.add_ghosting_functor(default_coupling);
    }
 
  libMesh::out << "Reading " << filename << std::endl;
 
  mesh.read(filename);
 
  for (const auto & n_procs : all_n_procs)
    {
      libMesh::out << "splitting " << n_procs << " ways..." << std::endl;
 
      auto cpr = split_mesh(mesh, n_procs);
 
      if (!libMesh::on_command_line("--dry-run"))
        {
          libMesh::out << "    * writing " << cpr->current_processor_ids().size() << " files per process..." << std::endl;
 
          const bool binary = !libMesh::on_command_line("--ascii");
 
          cpr->binary() = binary;
          std::ostringstream outputname;
          outputname << remove_extension(filename) << (binary ? ".cpr" : ".cpa");
          cpr->write(outputname.str());
        }
    }
 
  return 0;
}