- PorousFlowDictatorThe UserObject that holds the list of PorousFlow variable names.
C++ Type:UserObjectName
Unit:(no unit assumed)
Controllable:No
Description:The UserObject that holds the list of PorousFlow variable names.
PorousFlowFluidMass
Calculates the mass of a fluid component in a region
This Postprocessor calculates the mass of a fluid component using where all variables are defined in nomenclature.
The fluid component is specified in the input parameter fluid_component. By default, the mass of fluid component is summed over all fluid phases. The sum can be restricted to only a subset of fluid phases by entering the phase indexes in the phase input parameter.
This Postprocessor also provides the option to only calculate fluid mass below a certain saturation, which can be invoked using the saturation_threshold parameter.
The flag use_displaced_mesh = false is set internally by this Postprocessor, and the parameter cannot be altered by the user, even for simulations with solid-mechanical deformation. The reason is that this postprocessor uses the strain calculated by SolidMechanics to automatically compensate for deformed meshes. Further information may be found here. Therefore:
For mechanically-coupled simulations, you must provide a
base_namethat is identical to that used by the SolidMechanics strain calculator, so that this Postprocessor can retrieve the correct strain. The most common use-case is that you provide nobase_nameto the SolidMechanics strain calculator and hence nobase_nameto this Postprocessor.For non-mechanically-coupled simulations, you must not provide a
base_namethat is used in any SolidMechanics strain calculators. The most common use-case is that you have no SolidMechanics strain calculators, so you needn't worry about providing anybase_nameto this postprocessor. However, there is a possibility that you have a SolidMechanics strain calculator but you don't want to couple mechanics to PorousFlow. In that case, supplybase_name = non_existent, or similar, so that this Postprocessor doesn't retrieve any strain.
Input Parameters
- base_nameFor non-mechanically-coupled systems with no TensorMechanics strain calculators, base_name need not be set. For mechanically-coupled systems, base_name should be the same base_name as given to the TensorMechanics object that computes strain, so that this Postprocessor can correctly account for changes in mesh volume. For non-mechanically-coupled systems, base_name should not be the base_name of any TensorMechanics strain calculators.
C++ Type:std::string
Unit:(no unit assumed)
Controllable:No
Description:For non-mechanically-coupled systems with no TensorMechanics strain calculators, base_name need not be set. For mechanically-coupled systems, base_name should be the same base_name as given to the TensorMechanics object that computes strain, so that this Postprocessor can correctly account for changes in mesh volume. For non-mechanically-coupled systems, base_name should not be the base_name of any TensorMechanics strain calculators.
- blockThe list of blocks (ids or names) that this object will be applied
C++ Type:std::vector<SubdomainName>
Unit:(no unit assumed)
Controllable:No
Description:The list of blocks (ids or names) that this object will be applied
- execute_onTIMESTEP_ENDThe list of flag(s) indicating when this object should be executed. For a description of each flag, see https://mooseframework.inl.gov/source/interfaces/SetupInterface.html.
Default:TIMESTEP_END
C++ Type:ExecFlagEnum
Unit:(no unit assumed)
Options:XFEM_MARK, FORWARD, ADJOINT, HOMOGENEOUS_FORWARD, ADJOINT_TIMESTEP_BEGIN, ADJOINT_TIMESTEP_END, NONE, INITIAL, LINEAR, NONLINEAR_CONVERGENCE, NONLINEAR, POSTCHECK, TIMESTEP_END, TIMESTEP_BEGIN, MULTIAPP_FIXED_POINT_END, MULTIAPP_FIXED_POINT_BEGIN, FINAL, CUSTOM, TRANSFER
Controllable:No
Description:The list of flag(s) indicating when this object should be executed. For a description of each flag, see https://mooseframework.inl.gov/source/interfaces/SetupInterface.html.
- fluid_component0The index corresponding to the fluid component that this Postprocessor acts on
Default:0
C++ Type:unsigned int
Unit:(no unit assumed)
Controllable:No
Description:The index corresponding to the fluid component that this Postprocessor acts on
- kernel_variable_number0The PorousFlow variable number (according to the dictator) of the fluid-mass kernel. This is required only in the unusual situation where a variety of different finite-element interpolation schemes are employed in the simulation
Default:0
C++ Type:unsigned int
Unit:(no unit assumed)
Controllable:No
Description:The PorousFlow variable number (according to the dictator) of the fluid-mass kernel. This is required only in the unusual situation where a variety of different finite-element interpolation schemes are employed in the simulation
- phaseThe index of the fluid phase that this Postprocessor is restricted to. Multiple indices can be entered
C++ Type:std::vector<unsigned int>
Unit:(no unit assumed)
Controllable:No
Description:The index of the fluid phase that this Postprocessor is restricted to. Multiple indices can be entered
- prop_getter_suffixAn optional suffix parameter that can be appended to any attempt to retrieve/get material properties. The suffix will be prepended with a '_' character.
C++ Type:MaterialPropertyName
Unit:(no unit assumed)
Controllable:No
Description:An optional suffix parameter that can be appended to any attempt to retrieve/get material properties. The suffix will be prepended with a '_' character.
- saturation_threshold1The saturation threshold below which the mass is calculated for a specific phase. Default is 1.0. Note: only one phase_index can be entered
Default:1
C++ Type:double
Unit:(no unit assumed)
Controllable:No
Description:The saturation threshold below which the mass is calculated for a specific phase. Default is 1.0. Note: only one phase_index can be entered
- use_interpolated_stateFalseFor the old and older state use projected material properties interpolated at the quadrature points. To set up projection use the ProjectedStatefulMaterialStorageAction.
Default:False
C++ Type:bool
Unit:(no unit assumed)
Controllable:No
Description:For the old and older state use projected material properties interpolated at the quadrature points. To set up projection use the ProjectedStatefulMaterialStorageAction.
Optional Parameters
- allow_duplicate_execution_on_initialFalseIn the case where this UserObject is depended upon by an initial condition, allow it to be executed twice during the initial setup (once before the IC and again after mesh adaptivity (if applicable).
Default:False
C++ Type:bool
Unit:(no unit assumed)
Controllable:No
Description:In the case where this UserObject is depended upon by an initial condition, allow it to be executed twice during the initial setup (once before the IC and again after mesh adaptivity (if applicable).
- control_tagsAdds user-defined labels for accessing object parameters via control logic.
C++ Type:std::vector<std::string>
Unit:(no unit assumed)
Controllable:No
Description:Adds user-defined labels for accessing object parameters via control logic.
- enableTrueSet the enabled status of the MooseObject.
Default:True
C++ Type:bool
Unit:(no unit assumed)
Controllable:Yes
Description:Set the enabled status of the MooseObject.
- execution_order_group0Execution order groups are executed in increasing order (e.g., the lowest number is executed first). Note that negative group numbers may be used to execute groups before the default (0) group. Please refer to the user object documentation for ordering of user object execution within a group.
Default:0
C++ Type:int
Unit:(no unit assumed)
Controllable:No
Description:Execution order groups are executed in increasing order (e.g., the lowest number is executed first). Note that negative group numbers may be used to execute groups before the default (0) group. Please refer to the user object documentation for ordering of user object execution within a group.
- force_postauxFalseForces the UserObject to be executed in POSTAUX
Default:False
C++ Type:bool
Unit:(no unit assumed)
Controllable:No
Description:Forces the UserObject to be executed in POSTAUX
- force_preauxFalseForces the UserObject to be executed in PREAUX
Default:False
C++ Type:bool
Unit:(no unit assumed)
Controllable:No
Description:Forces the UserObject to be executed in PREAUX
- force_preicFalseForces the UserObject to be executed in PREIC during initial setup
Default:False
C++ Type:bool
Unit:(no unit assumed)
Controllable:No
Description:Forces the UserObject to be executed in PREIC during initial setup
- implicitTrueDetermines whether this object is calculated using an implicit or explicit form
Default:True
C++ Type:bool
Unit:(no unit assumed)
Controllable:No
Description:Determines whether this object is calculated using an implicit or explicit form
- outputsVector of output names where you would like to restrict the output of variables(s) associated with this object
C++ Type:std::vector<OutputName>
Unit:(no unit assumed)
Controllable:No
Description:Vector of output names where you would like to restrict the output of variables(s) associated with this object
- seed0The seed for the master random number generator
Default:0
C++ Type:unsigned int
Unit:(no unit assumed)
Controllable:No
Description:The seed for the master random number generator
Advanced Parameters
Input Files
- (modules/porous_flow/test/tests/energy_conservation/heat04_fullysat_action.i)
- (modules/porous_flow/test/tests/dirackernels/bh_except10.i)
- (modules/porous_flow/test/tests/poro_elasticity/pp_generation.i)
- (modules/porous_flow/test/tests/fluidstate/theis_tabulated.i)
- (modules/porous_flow/test/tests/fluidstate/waterncg.i)
- (modules/porous_flow/examples/restart/gas_injection_new_mesh.i)
- (modules/porous_flow/test/tests/mass_conservation/mass01.i)
- (modules/porous_flow/test/tests/mass_conservation/mass03.i)
- (modules/porous_flow/test/tests/dirackernels/bh_except05.i)
- (modules/porous_flow/test/tests/poro_elasticity/pp_generation_fullysat_action.i)
- (modules/porous_flow/test/tests/dirackernels/bh03.i)
- (modules/porous_flow/test/tests/fluidstate/theis_brineco2.i)
- (modules/porous_flow/test/tests/dirackernels/pls03.i)
- (modules/porous_flow/test/tests/mass_conservation/mass02.i)
- (modules/porous_flow/test/tests/dirackernels/squarepulse1.i)
- (modules/porous_flow/test/tests/gravity/grav02e.i)
- (modules/porous_flow/test/tests/gravity/grav02a.i)
- (modules/porous_flow/test/tests/dirackernels/bh05.i)
- (modules/porous_flow/test/tests/gravity/grav02g.i)
- (modules/porous_flow/test/tests/mass_conservation/mass06.i)
- (modules/porous_flow/test/tests/dirackernels/bh02.i)
- (modules/porous_flow/test/tests/fluidstate/theis.i)
- (modules/porous_flow/test/tests/sinks/s08.i)
- (modules/porous_flow/test/tests/dirackernels/pls03_action.i)
- (modules/porous_flow/test/tests/fluidstate/theis_brineco2_nonisothermal.i)
- (modules/porous_flow/test/tests/energy_conservation/heat03_rz.i)
- (modules/porous_flow/test/tests/heterogeneous_materials/constant_poroperm.i)
- (modules/porous_flow/test/tests/mass_conservation/mass08.i)
- (modules/porous_flow/test/tests/fluidstate/water_vapor_phasechange.i)
- (modules/porous_flow/test/tests/dirackernels/pls01.i)
- (modules/porous_flow/test/tests/dirackernels/bh_except06.i)
- (modules/porous_flow/test/tests/heterogeneous_materials/constant_poroperm2.i)
- (modules/porous_flow/test/tests/dirackernels/bh_except01.i)
- (modules/porous_flow/test/tests/dirackernels/bh_except03.i)
- (modules/porous_flow/test/tests/fluidstate/brineco2_2.i)
- (modules/porous_flow/test/tests/dirackernels/hfrompps.i)
- (modules/porous_flow/test/tests/fluidstate/waterncg_nonisothermal.i)
- (modules/porous_flow/test/tests/dirackernels/theis3.i)
- (modules/porous_flow/test/tests/dirackernels/bh_except15.i)
- (modules/porous_flow/test/tests/mass_conservation/mass05.i)
- (modules/porous_flow/test/tests/fluidstate/brineco2_nonisothermal.i)
- (modules/porous_flow/test/tests/fluidstate/brineco2.i)
- (modules/porous_flow/test/tests/energy_conservation/heat03.i)
- (modules/porous_flow/test/tests/dirackernels/bh02reporter.i)
- (modules/porous_flow/test/tests/dirackernels/bh_except07.i)
- (modules/porous_flow/examples/lava_lamp/2phase_convection.i)
- (modules/porous_flow/test/tests/dirackernels/bh_except14.i)
- (modules/porous_flow/test/tests/energy_conservation/heat04_rz.i)
- (modules/porous_flow/examples/co2_intercomparison/1Dradial/1Dradial.i)
- (modules/porous_flow/test/tests/gravity/grav02f.i)
- (modules/porous_flow/test/tests/dirackernels/theis1.i)
- (modules/porous_flow/test/tests/energy_conservation/heat04.i)
- (modules/porous_flow/test/tests/dirackernels/bh_except16.i)
- (modules/porous_flow/test/tests/mass_conservation/mass11.i)
- (modules/porous_flow/test/tests/dirackernels/pls02.i)
- (modules/porous_flow/test/tests/dirackernels/bh_except02.i)
- (modules/porous_flow/test/tests/mass_conservation/mass07.i)
- (modules/porous_flow/test/tests/dirackernels/bh_except04.i)
- (modules/porous_flow/test/tests/fluidstate/water_vapor_tab.i)
- (modules/porous_flow/test/tests/dirackernels/bh_except09.i)
- (modules/porous_flow/test/tests/fluidstate/theis_nonisothermal.i)
- (modules/porous_flow/test/tests/energy_conservation/heat04_action.i)
- (modules/porous_flow/test/tests/energy_conservation/heat04_action_KT.i)
- (modules/porous_flow/test/tests/dirackernels/bh_except13.i)
- (modules/porous_flow/test/tests/heterogeneous_materials/constant_poroperm3.i)
- (modules/porous_flow/test/tests/mass_conservation/mass13.i)
- (modules/porous_flow/test/tests/dirackernels/frompps.i)
- (modules/porous_flow/test/tests/mass_conservation/mass15.i)
- (modules/porous_flow/test/tests/mass_conservation/mass10.i)
- (modules/porous_flow/test/tests/poro_elasticity/undrained_oedometer.i)
- (modules/porous_flow/examples/lava_lamp/1phase_convection.i)
- (modules/porous_flow/test/tests/gravity/grav02c.i)
- (modules/porous_flow/test/tests/dirackernels/bh04.i)
- (modules/porous_flow/test/tests/dirackernels/bh_except11.i)
- (modules/porous_flow/test/tests/dirackernels/bh07.i)
- (modules/porous_flow/test/tests/radioactive_decay/radioactive_decay01.i)
- (modules/porous_flow/test/tests/mass_conservation/mass12.i)
- (modules/porous_flow/test/tests/dirackernels/bh_except12.i)
- (modules/porous_flow/examples/restart/gas_injection.i)
- (modules/porous_flow/test/tests/fluidstate/water_vapor.i)
- (modules/porous_flow/test/tests/poro_elasticity/pp_generation_action.i)
- (modules/porous_flow/test/tests/fluidstate/brineco2_hightemp.i)
- (modules/porous_flow/test/tests/mass_conservation/mass04.i)
- (modules/porous_flow/test/tests/dirackernels/bh_except08.i)
- (modules/porous_flow/test/tests/mass_conservation/mass09.i)
- (modules/porous_flow/test/tests/dirackernels/pls02reporter.i)
(modules/porous_flow/test/tests/energy_conservation/heat04_fullysat_action.i)
# heat04, but using an action
#
# The sample is a single unit element, with fixed displacements on
# all sides. A heat source of strength S (J/m^3/s) is applied into
# the element. There is no fluid flow or heat flow. The rise
# in temperature, porepressure and stress, and the change in porosity is
# matched with theory.
#
# In this case, fluid mass must be conserved, and there is no
# volumetric strain, so
# porosity * fluid_density = constant
# Also, the energy-density in the rock-fluid system increases with S:
# d/dt [(1 - porosity) * rock_density * rock_heat_cap * T + porosity * fluid_density * fluid_heat_cap * T] = S
# Also, the porosity evolves according to THM as
# porosity = biot + (porosity0 - biot) * exp( (biot - 1) * P / fluid_bulk + rock_thermal_exp * T)
# Finally, the effective stress must be exactly zero (as there is
# no strain).
#
# Let us assume that
# fluid_density = dens0 * exp(P / fluid_bulk - fluid_thermal_exp * T)
# Then the conservation of fluid mass means
# porosity = por0 * exp(- P / fluid_bulk + fluid_thermal_exp * T)
# where dens0 * por0 = the initial fluid mass.
# The last expression for porosity, combined with the THM one,
# and assuming that biot = 1 for simplicity, gives
# porosity = 1 + (porosity0 - 1) * exp(rock_thermal_exp * T) = por0 * exp(- P / fluid_bulk + fluid_thermal_exp * T) .... (A)
#
# This stuff may be substituted into the heat energy-density equation:
# S = d/dt [(1 - porosity0) * exp(rock_thermal_exp * T) * rock_density * rock_heat_cap * T + porosity * fluid_density * fluid_heat_cap * T]
#
# If S is constant then
# S * t = (1 - porosity0) * exp(rock_thermal_exp * T) * rock_density * rock_heat_cap * T + porosity * fluid_density * fluid_heat_cap * T
# with T(t=0) = 0 then Eqn(A) implies that por0 = porosity0 and
# P / fluid_bulk = fluid_thermal_exp * T - log(1 + (por0 - 1) * exp(rock_thermal_exp * T)) + log(por0)
#
# Parameters:
# A = 2
# fluid_bulk = 2.0
# dens0 = 3.0
# fluid_thermal_exp = 0.5
# fluid_heat_cap = 2
# por0 = 0.5
# rock_thermal_exp = 0.25
# rock_density = 5
# rock_heat_capacity = 0.2
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -0.5
xmax = 0.5
ymin = -0.5
ymax = 0.5
zmin = -0.5
zmax = 0.5
[]
[FluidProperties]
[the_simple_fluid]
type = SimpleFluidProperties
thermal_expansion = 0.5
cv = 2
cp = 2
bulk_modulus = 2.0
density0 = 3.0
[]
[]
[PorousFlowFullySaturated]
coupling_type = ThermoHydroMechanical
displacements = 'disp_x disp_y disp_z'
porepressure = pp
temperature = temp
dictator_name = Sir
biot_coefficient = 1.0
gravity = '0 0 0'
fp = the_simple_fluid
stabilization = none
[]
[GlobalParams]
displacements = 'disp_x disp_y disp_z'
PorousFlowDictator = Sir
block = 0
[]
[Variables]
[disp_x]
[]
[disp_y]
[]
[disp_z]
[]
[pp]
[]
[temp]
[]
[]
[BCs]
[confinex]
type = DirichletBC
variable = disp_x
value = 0
boundary = 'left right'
[]
[confiney]
type = DirichletBC
variable = disp_y
value = 0
boundary = 'bottom top'
[]
[confinez]
type = DirichletBC
variable = disp_z
value = 0
boundary = 'back front'
[]
[]
[Kernels]
[heat_source]
type = BodyForce
function = 1
variable = temp
[]
[]
[Functions]
[err_T_fcn]
type = ParsedFunction
symbol_names = 'por0 rte temp rd rhc m0 fhc source'
symbol_values = '0.5 0.25 t0 5 0.2 1.5 2 1'
expression = '((1-por0)*exp(rte*temp)*rd*rhc*temp+m0*fhc*temp-source*t)/(source*t)'
[]
[err_pp_fcn]
type = ParsedFunction
symbol_names = 'por0 rte temp rd rhc m0 fhc source bulk pp fte'
symbol_values = '0.5 0.25 t0 5 0.2 1.5 2 1 2 p0 0.5'
expression = '(bulk*(fte*temp-log(1+(por0-1)*exp(rte*temp))+log(por0))-pp)/pp'
[]
[]
[AuxVariables]
[porosity]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[porosity]
type = PorousFlowPropertyAux
property = porosity
variable = porosity
[]
[]
[Materials]
[elasticity_tensor]
type = ComputeElasticityTensor
C_ijkl = '1 1.5'
# bulk modulus is lambda + 2*mu/3 = 1 + 2*1.5/3 = 2
fill_method = symmetric_isotropic
[]
[strain]
type = ComputeSmallStrain
[]
[stress]
type = ComputeLinearElasticStress
[]
[porosity]
type = PorousFlowPorosity
thermal = true
fluid = true
mechanical = true
ensure_positive = false
biot_coefficient = 1.0
porosity_zero = 0.5
thermal_expansion_coeff = 0.25
solid_bulk = 2
[]
[rock_heat]
type = PorousFlowMatrixInternalEnergy
specific_heat_capacity = 0.2
density = 5.0
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '0 0 0 0 0 0 0 0 0'
[]
[thermal_conductivity]
type = PorousFlowThermalConductivityIdeal
dry_thermal_conductivity = '0 0 0 0 0 0 0 0 0'
[]
[]
[Postprocessors]
[p0]
type = PointValue
outputs = 'console csv'
execute_on = 'timestep_end'
point = '0 0 0'
variable = pp
[]
[t0]
type = PointValue
outputs = 'console csv'
execute_on = 'timestep_end'
point = '0 0 0'
variable = temp
[]
[porosity]
type = PointValue
outputs = 'console csv'
execute_on = 'timestep_end'
point = '0 0 0'
variable = porosity
[]
[stress_xx]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_xx
[]
[stress_yy]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_yy
[]
[stress_zz]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_zz
[]
[fluid_mass]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'timestep_end'
outputs = 'console csv'
[]
[total_heat]
type = PorousFlowHeatEnergy
phase = 0
execute_on = 'timestep_end'
outputs = 'console csv'
[]
[err_T]
type = FunctionValuePostprocessor
function = err_T_fcn
[]
[err_P]
type = FunctionValuePostprocessor
function = err_pp_fcn
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_rtol -snes_max_it'
petsc_options_value = 'bcgs bjacobi 1E-12 10000'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
dt = 1
end_time = 5
[]
[Outputs]
execute_on = 'initial timestep_end'
file_base = heat04_fullysat_action
csv = true
[]
(modules/porous_flow/test/tests/dirackernels/bh_except10.i)
# PorousFlowPeacemanBorehole exception test
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = TimeDerivative
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
compute_internal_energy = false
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
bottom_p_or_t = 0
fluid_phase = 0
point_file = bh02.bh
use_mobility = true
use_internal_energy = true
SumQuantityUO = borehole_total_outflow_mass
variable = pp
unit_weight = '0 0 0'
character = 1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 0.5
dt = 1E-2
solve_type = NEWTON
[]
(modules/porous_flow/test/tests/poro_elasticity/pp_generation.i)
# A sample is constrained on all sides and its boundaries are
# also impermeable. Fluid is pumped into the sample via a
# volumetric source (ie kg/second per cubic meter), and the
# rise in porepressure is observed.
#
# Source = s (units = kg/m^3/second)
#
# Expect:
# fluid_mass = mass0 + s*t
# stress = 0 (remember this is effective stress)
# Porepressure = fluid_bulk*log(fluid_mass_density/density_P0), where fluid_mass_density = fluid_mass*porosity
# porosity = biot+(phi0-biot)*exp(pp(biot-1)/solid_bulk)
#
# Parameters:
# Biot coefficient = 0.3
# Phi0 = 0.1
# Solid Bulk modulus = 2
# fluid_bulk = 13
# density_P0 = 1
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -0.5
xmax = 0.5
ymin = -0.5
ymax = 0.5
zmin = -0.5
zmax = 0.5
[]
[GlobalParams]
displacements = 'disp_x disp_y disp_z'
PorousFlowDictator = dictator
block = 0
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'porepressure disp_x disp_y disp_z'
number_fluid_phases = 1
number_fluid_components = 1
[]
[]
[Variables]
[disp_x]
[]
[disp_y]
[]
[disp_z]
[]
[porepressure]
[]
[]
[BCs]
[confinex]
type = DirichletBC
variable = disp_x
value = 0
boundary = 'left right'
[]
[confiney]
type = DirichletBC
variable = disp_y
value = 0
boundary = 'bottom top'
[]
[confinez]
type = DirichletBC
variable = disp_z
value = 0
boundary = 'back front'
[]
[]
[Kernels]
[grad_stress_x]
type = StressDivergenceTensors
variable = disp_x
component = 0
[]
[grad_stress_y]
type = StressDivergenceTensors
variable = disp_y
component = 1
[]
[grad_stress_z]
type = StressDivergenceTensors
variable = disp_z
component = 2
[]
[poro_x]
type = PorousFlowEffectiveStressCoupling
biot_coefficient = 0.3
variable = disp_x
component = 0
[]
[poro_y]
type = PorousFlowEffectiveStressCoupling
biot_coefficient = 0.3
variable = disp_y
component = 1
[]
[poro_z]
type = PorousFlowEffectiveStressCoupling
biot_coefficient = 0.3
component = 2
variable = disp_z
[]
[poro_vol_exp]
type = PorousFlowMassVolumetricExpansion
variable = porepressure
fluid_component = 0
[]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = porepressure
[]
[flux]
type = PorousFlowAdvectiveFlux
variable = porepressure
gravity = '0 0 0'
fluid_component = 0
[]
[source]
type = BodyForce
function = 0.1
variable = porepressure
[]
[]
[AuxVariables]
[stress_xx]
order = CONSTANT
family = MONOMIAL
[]
[stress_xy]
order = CONSTANT
family = MONOMIAL
[]
[stress_xz]
order = CONSTANT
family = MONOMIAL
[]
[stress_yy]
order = CONSTANT
family = MONOMIAL
[]
[stress_yz]
order = CONSTANT
family = MONOMIAL
[]
[stress_zz]
order = CONSTANT
family = MONOMIAL
[]
[porosity]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[stress_xx]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_xx
index_i = 0
index_j = 0
[]
[stress_xy]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_xy
index_i = 0
index_j = 1
[]
[stress_xz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_xz
index_i = 0
index_j = 2
[]
[stress_yy]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_yy
index_i = 1
index_j = 1
[]
[stress_yz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_yz
index_i = 1
index_j = 2
[]
[stress_zz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_zz
index_i = 2
index_j = 2
[]
[porosity]
type = PorousFlowPropertyAux
variable = porosity
property = porosity
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 13
density0 = 1
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[elasticity_tensor]
type = ComputeElasticityTensor
C_ijkl = '1 1.5'
# bulk modulus is lambda + 2*mu/3 = 1 + 2*1.5/3 = 2
fill_method = symmetric_isotropic
[]
[strain]
type = ComputeSmallStrain
[]
[stress]
type = ComputeLinearElasticStress
[]
[eff_fluid_pressure]
type = PorousFlowEffectiveFluidPressure
[]
[vol_strain]
type = PorousFlowVolumetricStrain
[]
[ppss]
type = PorousFlow1PhaseFullySaturated
porepressure = porepressure
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosity
fluid = true
mechanical = true
porosity_zero = 0.1
biot_coefficient = 0.3
solid_bulk = 2
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1 0 0 0 1 0 0 0 1' # unimportant
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 0 # unimportant in this fully-saturated situation
phase = 0
[]
[]
[Functions]
[porosity_analytic]
type = ParsedFunction
expression = 'biot+(phi0-biot)*exp(pp*(biot-1)/bulk)'
symbol_names = 'biot phi0 pp bulk'
symbol_values = '0.3 0.1 p0 2'
[]
[]
[Postprocessors]
[fluid_mass]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
[]
[porosity]
type = PointValue
outputs = 'console csv'
point = '0 0 0'
variable = porosity
[]
[p0]
type = PointValue
outputs = csv
point = '0 0 0'
variable = porepressure
[]
[porosity_analytic]
type = FunctionValuePostprocessor
function = porosity_analytic
[]
[zdisp]
type = PointValue
outputs = csv
point = '0 0 0.5'
variable = disp_z
[]
[stress_xx]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_xx
[]
[stress_yy]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_yy
[]
[stress_zz]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_zz
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_max_it -snes_stol'
petsc_options_value = 'bcgs bjacobi 10000 1E-11'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
start_time = 0
end_time = 10
dt = 1
[]
[Outputs]
execute_on = 'timestep_end'
file_base = pp_generation
[csv]
type = CSV
[]
[]
(modules/porous_flow/test/tests/fluidstate/theis_tabulated.i)
# Two phase Theis problem: Flow from single source using WaterNCG fluidstate.
# Constant rate injection 2 kg/s
# 1D cylindrical mesh
# Initially, system has only a liquid phase, until enough gas is injected
# to form a gas phase, in which case the system becomes two phase.
# Note: this test is the same as theis.i, but uses the tabulated version of the CO2FluidProperties
[Mesh]
type = GeneratedMesh
dim = 1
nx = 80
xmax = 200
bias_x = 1.05
coord_type = RZ
rz_coord_axis = Y
[]
[GlobalParams]
PorousFlowDictator = dictator
gravity = '0 0 0'
[]
[AuxVariables]
[saturation_gas]
order = CONSTANT
family = MONOMIAL
[]
[x1]
order = CONSTANT
family = MONOMIAL
[]
[y0]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[saturation_gas]
type = PorousFlowPropertyAux
variable = saturation_gas
property = saturation
phase = 1
execute_on = timestep_end
[]
[x1]
type = PorousFlowPropertyAux
variable = x1
property = mass_fraction
phase = 0
fluid_component = 1
execute_on = timestep_end
[]
[y0]
type = PorousFlowPropertyAux
variable = y0
property = mass_fraction
phase = 1
fluid_component = 0
execute_on = timestep_end
[]
[]
[Variables]
[pgas]
initial_condition = 20e6
[]
[zi]
initial_condition = 0
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pgas
[]
[flux0]
type = PorousFlowAdvectiveFlux
fluid_component = 0
variable = pgas
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = zi
[]
[flux1]
type = PorousFlowAdvectiveFlux
fluid_component = 1
variable = zi
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pgas zi'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureConst
pc = 0
[]
[fs]
type = PorousFlowWaterNCG
water_fp = water
gas_fp = tabulated
capillary_pressure = pc
[]
[]
[FluidProperties]
[co2]
type = CO2FluidProperties
[]
[tabulated]
type = TabulatedBicubicFluidProperties
fp = co2
fluid_property_file = fluid_properties.csv
# We try to avoid using both, but some properties are not implemented in the tabulation
allow_fp_and_tabulation = true
# Test was design prior to bounds check
error_on_out_of_bounds = false
# Comment out the fp parameter and uncomment below to use the newly generated tabulation
# fluid_property_file = fluid_properties.csv
[]
[water]
type = Water97FluidProperties
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
temperature = 20
[]
[waterncg]
type = PorousFlowFluidState
gas_porepressure = pgas
z = zi
temperature_unit = Celsius
capillary_pressure = pc
fluid_state = fs
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.2
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-12 0 0 0 1e-12 0 0 0 1e-12'
[]
[relperm_water]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
s_res = 0.1
sum_s_res = 0.1
[]
[relperm_gas]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 1
[]
[]
[BCs]
[rightwater]
type = DirichletBC
boundary = right
value = 20e6
variable = pgas
[]
[]
[DiracKernels]
[source]
type = PorousFlowSquarePulsePointSource
point = '0 0 0'
mass_flux = 2
variable = zi
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
petsc_options = '-snes_converged_reason -ksp_diagonal_scale -ksp_diagonal_scale_fix -ksp_gmres_modifiedgramschmidt -snes_linesearch_monitor'
petsc_options_iname = '-ksp_type -pc_type -sub_pc_type -sub_pc_factor_shift_type -pc_asm_overlap -snes_atol -snes_rtol -snes_max_it'
petsc_options_value = 'gmres asm lu NONZERO 2 1E-8 1E-10 20'
[]
[]
[Executioner]
type = Transient
solve_type = NEWTON
end_time = 8e2
[TimeStepper]
type = IterationAdaptiveDT
dt = 2
growth_factor = 2
[]
[]
[VectorPostprocessors]
[line]
type = LineValueSampler
warn_discontinuous_face_values = false
sort_by = x
start_point = '0 0 0'
end_point = '200 0 0'
num_points = 1000
variable = 'pgas zi x1 saturation_gas'
execute_on = 'timestep_end'
[]
[]
[Postprocessors]
[pgas]
type = PointValue
point = '1 0 0'
variable = pgas
[]
[sgas]
type = PointValue
point = '1 0 0'
variable = saturation_gas
[]
[zi]
type = PointValue
point = '1 0 0'
variable = zi
[]
[massgas]
type = PorousFlowFluidMass
fluid_component = 1
[]
[x1]
type = PointValue
point = '1 0 0'
variable = x1
[]
[y0]
type = PointValue
point = '1 0 0'
variable = y0
[]
[]
[Outputs]
print_linear_residuals = false
perf_graph = true
[csvout]
type = CSV
file_base = theis_tabulated_csvout
execute_on = timestep_end
execute_vector_postprocessors_on = final
[]
[]
(modules/porous_flow/test/tests/fluidstate/waterncg.i)
# Tests correct calculation of properties in PorousFlowWaterNCG.
# This test is run three times, with the initial condition of z (the total mass
# fraction of NCG in all phases) varied to give either a single phase liquid, a
# single phase gas, or two phases.
[Mesh]
[mesh]
type = GeneratedMeshGenerator
dim = 2
[]
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pgas]
initial_condition = 1e6
[]
[z]
initial_condition = 0.005
[]
[]
[AuxVariables]
[pressure_gas]
order = CONSTANT
family = MONOMIAL
[]
[pressure_water]
order = CONSTANT
family = MONOMIAL
[]
[saturation_gas]
order = CONSTANT
family = MONOMIAL
[]
[saturation_water]
order = CONSTANT
family = MONOMIAL
[]
[density_water]
order = CONSTANT
family = MONOMIAL
[]
[density_gas]
order = CONSTANT
family = MONOMIAL
[]
[viscosity_water]
order = CONSTANT
family = MONOMIAL
[]
[viscosity_gas]
order = CONSTANT
family = MONOMIAL
[]
[enthalpy_water]
order = CONSTANT
family = MONOMIAL
[]
[enthalpy_gas]
order = CONSTANT
family = MONOMIAL
[]
[internal_energy_water]
order = CONSTANT
family = MONOMIAL
[]
[internal_energy_gas]
order = CONSTANT
family = MONOMIAL
[]
[x0_water]
order = CONSTANT
family = MONOMIAL
[]
[x0_gas]
order = CONSTANT
family = MONOMIAL
[]
[x1_water]
order = CONSTANT
family = MONOMIAL
[]
[x1_gas]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[pressure_water]
type = PorousFlowPropertyAux
variable = pressure_water
property = pressure
phase = 0
execute_on = timestep_end
[]
[pressure_gas]
type = PorousFlowPropertyAux
variable = pressure_gas
property = pressure
phase = 1
execute_on = timestep_end
[]
[saturation_water]
type = PorousFlowPropertyAux
variable = saturation_water
property = saturation
phase = 0
execute_on = timestep_end
[]
[saturation_gas]
type = PorousFlowPropertyAux
variable = saturation_gas
property = saturation
phase = 1
execute_on = timestep_end
[]
[density_water]
type = PorousFlowPropertyAux
variable = density_water
property = density
phase = 0
execute_on = timestep_end
[]
[density_gas]
type = PorousFlowPropertyAux
variable = density_gas
property = density
phase = 1
execute_on = timestep_end
[]
[viscosity_water]
type = PorousFlowPropertyAux
variable = viscosity_water
property = viscosity
phase = 0
execute_on = timestep_end
[]
[viscosity_gas]
type = PorousFlowPropertyAux
variable = viscosity_gas
property = viscosity
phase = 1
execute_on = timestep_end
[]
[enthalpy_water]
type = PorousFlowPropertyAux
variable = enthalpy_water
property = enthalpy
phase = 0
execute_on = timestep_end
[]
[enthalpy_gas]
type = PorousFlowPropertyAux
variable = enthalpy_gas
property = enthalpy
phase = 1
execute_on = timestep_end
[]
[internal_energy_water]
type = PorousFlowPropertyAux
variable = internal_energy_water
property = internal_energy
phase = 0
execute_on = timestep_end
[]
[internal_energy_gas]
type = PorousFlowPropertyAux
variable = internal_energy_gas
property = internal_energy
phase = 1
execute_on = timestep_end
[]
[x1_water]
type = PorousFlowPropertyAux
variable = x1_water
property = mass_fraction
phase = 0
fluid_component = 1
execute_on = timestep_end
[]
[x1_gas]
type = PorousFlowPropertyAux
variable = x1_gas
property = mass_fraction
phase = 1
fluid_component = 1
execute_on = timestep_end
[]
[x0_water]
type = PorousFlowPropertyAux
variable = x0_water
property = mass_fraction
phase = 0
fluid_component = 0
execute_on = timestep_end
[]
[x0_gas]
type = PorousFlowPropertyAux
variable = x0_gas
property = mass_fraction
phase = 1
fluid_component = 0
execute_on = timestep_end
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
variable = pgas
fluid_component = 0
[]
[mass1]
type = PorousFlowMassTimeDerivative
variable = z
fluid_component = 1
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pgas z'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureConst
pc = 0
[]
[fs]
type = PorousFlowWaterNCG
water_fp = water
gas_fp = co2
capillary_pressure = pc
[]
[]
[FluidProperties]
[co2]
type = CO2FluidProperties
[]
[water]
type = Water97FluidProperties
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
temperature = 50
[]
[waterncg]
type = PorousFlowFluidState
gas_porepressure = pgas
z = z
temperature_unit = Celsius
capillary_pressure = pc
fluid_state = fs
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-12 0 0 0 1e-12 0 0 0 1e-12'
[]
[relperm0]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[relperm1]
type = PorousFlowRelativePermeabilityCorey
n = 3
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[Executioner]
type = Transient
solve_type = NEWTON
dt = 1
end_time = 1
nl_abs_tol = 1e-12
[]
[Preconditioning]
[smp]
type = SMP
full = true
[]
[]
[Postprocessors]
[density_water]
type = ElementIntegralVariablePostprocessor
variable = density_water
[]
[density_gas]
type = ElementIntegralVariablePostprocessor
variable = density_gas
[]
[viscosity_water]
type = ElementIntegralVariablePostprocessor
variable = viscosity_water
[]
[viscosity_gas]
type = ElementIntegralVariablePostprocessor
variable = viscosity_gas
[]
[enthalpy_water]
type = ElementIntegralVariablePostprocessor
variable = enthalpy_water
[]
[enthalpy_gas]
type = ElementIntegralVariablePostprocessor
variable = enthalpy_gas
[]
[internal_energy_water]
type = ElementIntegralVariablePostprocessor
variable = internal_energy_water
[]
[internal_energy_gas]
type = ElementIntegralVariablePostprocessor
variable = internal_energy_gas
[]
[x1_water]
type = ElementIntegralVariablePostprocessor
variable = x1_water
[]
[x0_water]
type = ElementIntegralVariablePostprocessor
variable = x0_water
[]
[x1_gas]
type = ElementIntegralVariablePostprocessor
variable = x1_gas
[]
[x0_gas]
type = ElementIntegralVariablePostprocessor
variable = x0_gas
[]
[sg]
type = ElementIntegralVariablePostprocessor
variable = saturation_gas
[]
[sw]
type = ElementIntegralVariablePostprocessor
variable = saturation_water
[]
[pwater]
type = ElementIntegralVariablePostprocessor
variable = pressure_water
[]
[pgas]
type = ElementIntegralVariablePostprocessor
variable = pressure_gas
[]
[x0mass]
type = PorousFlowFluidMass
fluid_component = 0
phase = '0 1'
[]
[x1mass]
type = PorousFlowFluidMass
fluid_component = 1
phase = '0 1'
[]
[]
[Outputs]
exodus = true
file_base = waterncg_liquid
[]
(modules/porous_flow/examples/restart/gas_injection_new_mesh.i)
# Using the results from the equilibrium run to provide the initial condition for
# porepressure, we now inject a gas phase into the brine-saturated reservoir. In this
# example, the mesh is not identical to the mesh used in gravityeq.i. Rather, it is
# generated so that it is more refined near the injection boundary and at the top of
# the model, as that is where the gas plume will be present.
#
# To use the hydrostatic pressure calculated using the gravity equilibrium run as the initial
# condition for the pressure, a SolutionUserObject is used, along with a SolutionFunction to
# interpolate the pressure from the gravity equilibrium run to the initial condition for liqiud
# porepressure in this example.
#
# Even though the gravity equilibrium is established using a 2D mesh, in this example,
# we use a mesh shifted 0.1 m to the right and rotate it about the Y axis to make a 2D radial
# model.
#
# Methane injection takes place over the surface of the hole created by rotating the mesh,
# and hence the injection area is 2 pi r h. We can calculate this using an AreaPostprocessor,
# and then use this in a ParsedFunction to calculate the injection rate so that 10 kg/s of
# methane is injected.
#
# Note: as this example uses the results from a previous simulation, gravityeq.i MUST be
# run before running this input file.
[Mesh]
type = GeneratedMesh
dim = 2
ny = 25
nx = 50
ymax = 100
xmin = 0.1
xmax = 5000
bias_x = 1.05
bias_y = 0.95
coord_type = RZ
rz_coord_axis = Y
[]
[GlobalParams]
PorousFlowDictator = dictator
gravity = '0 -9.81 0'
temperature_unit = Celsius
[]
[Variables]
[pp_liq]
[]
[sat_gas]
initial_condition = 0
[]
[]
[ICs]
[ppliq_ic]
type = FunctionIC
variable = pp_liq
function = ppliq_ic
[]
[]
[AuxVariables]
[temperature]
initial_condition = 50
[]
[xnacl]
initial_condition = 0.1
[]
[brine_density]
family = MONOMIAL
order = CONSTANT
[]
[methane_density]
family = MONOMIAL
order = CONSTANT
[]
[massfrac_ph0_sp0]
initial_condition = 1
[]
[massfrac_ph1_sp0]
initial_condition = 0
[]
[pp_gas]
family = MONOMIAL
order = CONSTANT
[]
[sat_liq]
family = MONOMIAL
order = CONSTANT
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
variable = pp_liq
[]
[flux0]
type = PorousFlowAdvectiveFlux
variable = pp_liq
[]
[mass1]
type = PorousFlowMassTimeDerivative
variable = sat_gas
fluid_component = 1
[]
[flux1]
type = PorousFlowAdvectiveFlux
variable = sat_gas
fluid_component = 1
[]
[]
[AuxKernels]
[brine_density]
type = PorousFlowPropertyAux
property = density
variable = brine_density
execute_on = 'initial timestep_end'
[]
[methane_density]
type = PorousFlowPropertyAux
property = density
variable = methane_density
phase = 1
execute_on = 'initial timestep_end'
[]
[pp_gas]
type = PorousFlowPropertyAux
property = pressure
phase = 1
variable = pp_gas
execute_on = 'initial timestep_end'
[]
[sat_liq]
type = PorousFlowPropertyAux
property = saturation
variable = sat_liq
execute_on = 'initial timestep_end'
[]
[]
[BCs]
[gas_injection]
type = PorousFlowSink
boundary = left
variable = sat_gas
flux_function = injection_rate
fluid_phase = 1
[]
[brine_out]
type = PorousFlowPiecewiseLinearSink
boundary = right
variable = pp_liq
multipliers = '0 1e9'
pt_vals = '0 1e9'
fluid_phase = 0
flux_function = 1e-6
use_mobility = true
use_relperm = true
mass_fraction_component = 0
[]
[]
[Functions]
[injection_rate]
type = ParsedFunction
symbol_values = injection_area
symbol_names = area
expression = '-1/area'
[]
[ppliq_ic]
type = SolutionFunction
solution = soln
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp_liq sat_gas'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureVG
alpha = 1e-5
m = 0.5
sat_lr = 0.2
pc_max = 1e7
[]
[soln]
type = SolutionUserObject
mesh = gravityeq_out.e
system_variables = porepressure
[]
[]
[FluidProperties]
[brine]
type = BrineFluidProperties
[]
[methane]
type = MethaneFluidProperties
[]
[methane_tab]
type = TabulatedBicubicFluidProperties
fp = methane
save_file = false
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
temperature = temperature
[]
[ps]
type = PorousFlow2PhasePS
phase0_porepressure = pp_liq
phase1_saturation = sat_gas
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
mass_fraction_vars = 'massfrac_ph0_sp0 massfrac_ph1_sp0'
[]
[brine]
type = PorousFlowBrine
compute_enthalpy = false
compute_internal_energy = false
xnacl = xnacl
phase = 0
[]
[methane]
type = PorousFlowSingleComponentFluid
compute_enthalpy = false
compute_internal_energy = false
fp = methane_tab
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-13 0 0 0 5e-14 0 0 0 1e-13'
[]
[relperm_liq]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
s_res = 0.2
sum_s_res = 0.3
[]
[relperm_gas]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 1
s_res = 0.1
sum_s_res = 0.3
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
petsc_options_iname = '-pc_type -sub_pc_type -sub_pc_factor_shift_type'
petsc_options_value = ' asm lu NONZERO'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
end_time = 1e8
nl_abs_tol = 1e-12
nl_rel_tol = 1e-06
nl_max_its = 20
dtmax = 1e6
[TimeStepper]
type = IterationAdaptiveDT
dt = 1e1
growth_factor = 1.5
[]
[]
[Postprocessors]
[mass_ph0]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
[]
[mass_ph1]
type = PorousFlowFluidMass
fluid_component = 1
execute_on = 'initial timestep_end'
[]
[injection_area]
type = AreaPostprocessor
boundary = left
execute_on = initial
[]
[]
[Outputs]
execute_on = 'initial timestep_end'
exodus = true
perf_graph = true
[]
(modules/porous_flow/test/tests/mass_conservation/mass01.i)
# checking that the mass postprocessor correctly calculates the mass
# 1phase, 1component, constant porosity
[Mesh]
type = GeneratedMesh
dim = 1
nx = 3
xmin = -1
xmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
[]
[]
[ICs]
[pinit]
type = FunctionIC
function = x
variable = pp
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 1
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[Postprocessors]
[total_mass]
type = PorousFlowFluidMass
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it'
petsc_options_value = 'bcgs bjacobi 1 1 10000'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
dt = 1
end_time = 1
[]
[Outputs]
execute_on = 'timestep_end'
file_base = mass01
csv = true
[]
(modules/porous_flow/test/tests/mass_conservation/mass03.i)
# checking that the mass postprocessor correctly calculates the mass
# 1phase, 1component, constant porosity, with a constant fluid source
[Mesh]
type = GeneratedMesh
dim = 3
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = -0.5
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[source]
type = BodyForce
variable = pp
value = 0.1 # kg/m^3/s
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 1
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[Postprocessors]
[porepressure]
type = PointValue
point = '0 0 0'
variable = pp
execute_on = 'initial timestep_end'
[]
[total_mass]
type = PorousFlowFluidMass
execute_on = 'initial timestep_end'
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it'
petsc_options_value = 'gmres bjacobi 1E-12 1E-20 10000'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
dt = 1
end_time = 10
[]
[Outputs]
execute_on = 'initial timestep_end'
file_base = mass03
csv = true
[]
(modules/porous_flow/test/tests/dirackernels/bh_except05.i)
# PorousFlowPeacemanBorehole exception test
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = TimeDerivative
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-12 0 0 0 1E-12 0 0 0 1E-12'
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
bottom_p_or_t = 0
fluid_phase = 0
mass_fraction_component = 0
point_file = bh02.bh
SumQuantityUO = borehole_total_outflow_mass
variable = pp
unit_weight = '0 0 0'
character = 1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 0.5
dt = 1E-2
solve_type = NEWTON
[]
(modules/porous_flow/test/tests/poro_elasticity/pp_generation_fullysat_action.i)
# Same as pp_generation.i, but using an Action
#
# A sample is constrained on all sides and its boundaries are
# also impermeable. Fluid is pumped into the sample via a
# volumetric source (ie kg/second per cubic meter), and the
# rise in porepressure is observed.
#
# Source = s (units = kg/m^3/second)
#
# Expect:
# fluid_mass = mass0 + s*t
# stress = 0 (remember this is effective stress)
# Porepressure = fluid_bulk*log(fluid_mass_density/density_P0), where fluid_mass_density = fluid_mass/porosity
# porosity = biot+(phi0-biot)*exp(pp(biot-1)/solid_bulk)
#
# Parameters:
# Biot coefficient = 0.3
# Phi0 = 0.1
# Solid Bulk modulus = 2
# fluid_bulk = 13
# density_P0 = 1
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -0.5
xmax = 0.5
ymin = -0.5
ymax = 0.5
zmin = -0.5
zmax = 0.5
[]
[GlobalParams]
displacements = 'disp_x disp_y disp_z'
PorousFlowDictator = dictator
block = 0
[]
[Variables]
[disp_x]
[]
[disp_y]
[]
[disp_z]
[]
[porepressure]
[]
[]
[FluidProperties]
[the_simple_fluid]
type = SimpleFluidProperties
thermal_expansion = 0.0
bulk_modulus = 13.0
viscosity = 1.0
density0 = 1.0
[]
[]
[PorousFlowFullySaturated]
coupling_type = HydroMechanical
displacements = 'disp_x disp_y disp_z'
porepressure = porepressure
biot_coefficient = 0.3
gravity = '0 0 0'
fp = the_simple_fluid
stabilization = none # not needed: there is no flow
save_component_rate_in = nodal_kg_per_s
[]
[BCs]
[confinex]
type = DirichletBC
variable = disp_x
value = 0
boundary = 'left right'
[]
[confiney]
type = DirichletBC
variable = disp_y
value = 0
boundary = 'bottom top'
[]
[confinez]
type = DirichletBC
variable = disp_z
value = 0
boundary = 'back front'
[]
[]
[Kernels]
[source]
type = BodyForce
function = 0.1
variable = porepressure
[]
[]
[AuxVariables]
[nodal_kg_per_s]
[]
[porosity]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[porosity]
type = PorousFlowPropertyAux
variable = porosity
property = porosity
[]
[]
[Materials]
[elasticity_tensor]
type = ComputeElasticityTensor
C_ijkl = '1 1.5'
# bulk modulus is lambda + 2*mu/3 = 1 + 2*1.5/3 = 2
fill_method = symmetric_isotropic
[]
[strain]
type = ComputeSmallStrain
[]
[stress]
type = ComputeLinearElasticStress
[]
[porosity]
type = PorousFlowPorosity
fluid = true
mechanical = true
porosity_zero = 0.1
biot_coefficient = 0.3
solid_bulk = 2
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1 0 0 0 1 0 0 0 1' # unimportant
[]
[]
[Functions]
[porosity_analytic]
type = ParsedFunction
expression = 'biot+(phi0-biot)*exp(pp*(biot-1)/bulk)'
symbol_names = 'biot phi0 pp bulk'
symbol_values = '0.3 0.1 p0 2'
[]
[]
[Postprocessors]
[nodal_kg_per_s]
type = PointValue
point = ' 0 0 0'
variable = nodal_kg_per_s
outputs = csv
[]
[fluid_mass]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
[]
[porosity]
type = PointValue
outputs = 'console csv'
point = '0 0 0'
variable = porosity
[]
[p0]
type = PointValue
outputs = csv
point = '0 0 0'
variable = porepressure
[]
[porosity_analytic]
type = FunctionValuePostprocessor
function = porosity_analytic
[]
[zdisp]
type = PointValue
outputs = csv
point = '0 0 0.5'
variable = disp_z
[]
[stress_xx]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_xx
[]
[stress_yy]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_yy
[]
[stress_zz]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_zz
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it'
petsc_options_value = 'bcgs bjacobi 1E-14 1E-10 10000'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
start_time = 0
end_time = 10
dt = 1
[]
[Outputs]
execute_on = 'timestep_end'
file_base = pp_generation_fullysat_action
csv = true
[]
(modules/porous_flow/test/tests/dirackernels/bh03.i)
# fully-saturated
# injection
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = 1
xmax = 3
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 0
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-12 0 0 0 1E-12 0 0 0 1E-12'
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
variable = pp
SumQuantityUO = borehole_total_outflow_mass
point_file = bh03.bh
function_of = pressure
fluid_phase = 0
bottom_p_or_t = 'insitu_pp'
unit_weight = '0 0 0'
use_mobility = true
character = -1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
indirect_dependencies = 'fluid_mass1 fluid_mass0 bh_report'
[]
[p0]
type = PointValue
variable = pp
point = '2 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[insitu_pp]
type = ParsedFunction
expression = '0.5e7*x' #bh is located at x=2
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 0.5
dt = 1E-2
solve_type = NEWTON
[]
[Outputs]
file_base = bh03
exodus = false
csv = true
execute_on = timestep_end
[]
(modules/porous_flow/test/tests/fluidstate/theis_brineco2.i)
# Two phase Theis problem: Flow from single source.
# Constant rate injection 2 kg/s
# 1D cylindrical mesh
# Initially, system has only a liquid phase, until enough gas is injected
# to form a gas phase, in which case the system becomes two phase.
#
# This test takes a few minutes to run, so is marked heavy
[Mesh]
type = GeneratedMesh
dim = 1
nx = 2000
xmax = 2000
[]
[Problem]
type = FEProblem
coord_type = RZ
rz_coord_axis = Y
[]
[GlobalParams]
PorousFlowDictator = dictator
gravity = '0 0 0'
[]
[AuxVariables]
[saturation_gas]
order = CONSTANT
family = MONOMIAL
[]
[x1]
order = CONSTANT
family = MONOMIAL
[]
[y0]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[saturation_gas]
type = PorousFlowPropertyAux
variable = saturation_gas
property = saturation
phase = 1
execute_on = timestep_end
[]
[x1]
type = PorousFlowPropertyAux
variable = x1
property = mass_fraction
phase = 0
fluid_component = 1
execute_on = timestep_end
[]
[y0]
type = PorousFlowPropertyAux
variable = y0
property = mass_fraction
phase = 1
fluid_component = 0
execute_on = timestep_end
[]
[]
[Variables]
[pgas]
initial_condition = 20e6
[]
[zi]
initial_condition = 0
[]
[xnacl]
initial_condition = 0.1
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pgas
[]
[flux0]
type = PorousFlowAdvectiveFlux
fluid_component = 0
variable = pgas
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = zi
[]
[flux1]
type = PorousFlowAdvectiveFlux
fluid_component = 1
variable = zi
[]
[mass2]
type = PorousFlowMassTimeDerivative
fluid_component = 2
variable = xnacl
[]
[flux2]
type = PorousFlowAdvectiveFlux
fluid_component = 2
variable = xnacl
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pgas zi xnacl'
number_fluid_phases = 2
number_fluid_components = 3
[]
[pc]
type = PorousFlowCapillaryPressureConst
pc = 0
[]
[fs]
type = PorousFlowBrineCO2
brine_fp = brine
co2_fp = co2
capillary_pressure = pc
[]
[]
[FluidProperties]
[co2sw]
type = CO2FluidProperties
[]
[co2]
type = TabulatedFluidProperties
fp = co2sw
fluid_property_file = 'fluid_properties.csv'
allow_fp_and_tabulation = true
error_on_out_of_bounds = false
[]
[water]
type = Water97FluidProperties
[]
[watertab]
type = TabulatedFluidProperties
fp = water
temperature_min = 273.15
temperature_max = 573.15
fluid_property_output_file = water_fluid_properties.csv
# Comment out the fp parameter and uncomment below to use the newly generated tabulation
# fluid_property_file = water_fluid_properties.csv
[]
[brine]
type = BrineFluidProperties
water_fp = watertab
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
temperature = 20
[]
[brineco2]
type = PorousFlowFluidState
gas_porepressure = pgas
z = zi
temperature_unit = Celsius
xnacl = xnacl
capillary_pressure = pc
fluid_state = fs
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.2
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-12 0 0 0 1e-12 0 0 0 1e-12'
[]
[relperm_water]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
s_res = 0.1
sum_s_res = 0.1
[]
[relperm_gas]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 1
[]
[]
[BCs]
[rightwater]
type = DirichletBC
boundary = right
value = 20e6
variable = pgas
[]
[]
[DiracKernels]
[source]
type = PorousFlowSquarePulsePointSource
point = '0 0 0'
mass_flux = 2
variable = zi
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
[]
[]
[Executioner]
type = Transient
solve_type = NEWTON
end_time = 1e5
[TimeStepper]
type = IterationAdaptiveDT
dt = 1
growth_factor = 1.5
[]
[]
[VectorPostprocessors]
[line]
type = LineValueSampler
warn_discontinuous_face_values = false
sort_by = x
start_point = '0 0 0'
end_point = '2000 0 0'
num_points = 10000
variable = 'pgas zi xnacl x1 saturation_gas'
execute_on = 'timestep_end'
[]
[]
[Postprocessors]
[pgas]
type = PointValue
point = '4 0 0'
variable = pgas
[]
[sgas]
type = PointValue
point = '4 0 0'
variable = saturation_gas
[]
[zi]
type = PointValue
point = '4 0 0'
variable = zi
[]
[massgas]
type = PorousFlowFluidMass
fluid_component = 1
[]
[x1]
type = PointValue
point = '4 0 0'
variable = x1
[]
[y0]
type = PointValue
point = '4 0 0'
variable = y0
[]
[xnacl]
type = PointValue
point = '4 0 0'
variable = xnacl
[]
[]
[Outputs]
print_linear_residuals = false
perf_graph = true
[csvout]
type = CSV
execute_on = timestep_end
execute_vector_postprocessors_on = final
[]
[]
(modules/porous_flow/test/tests/dirackernels/pls03.i)
# Test that the upwinding works correctly.
#
# A poly-line sink sits at the centre of the element.
# It has length=4 and weight=0.5, and extracts fluid
# at a constant rate of
# (1 * relative_permeability) kg.m^-1.s^-1
# Since it sits at the centre of the element, it extracts
# equally from each node, so the rate of extraction from
# each node is
# (0.5 * relative_permeability) kg.s^-1
# including the length and weight effects.
#
# There is no fluid flow.
#
# The initial conditions are such that all nodes have
# relative_permeability=0, except for one which has
# relative_permeaility = 1. Therefore, all nodes should
# remain at their initial porepressure, except the one.
#
# The porosity is 0.1, and the elemental volume is 2,
# so the fluid mass at the node in question = 0.2 * density / 4,
# where the 4 is the number of nodes in the element.
# In this simulation density = dens0 * exp(P / bulk), with
# dens0 = 100, and bulk = 20 MPa.
# The initial porepressure P0 = 10 MPa, so the final (after
# 1 second of simulation) is
# P(t=1) = 8.748592 MPa
[Mesh]
type = GeneratedMesh
dim = 2
nx = 1
ny = 1
xmin = 0
xmax = 2
ymin = 0
ymax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
[]
[]
[ICs]
[pp]
type = FunctionIC
variable = pp
#function = if((x<1)&(y<0.5),1E7,-1E7)
function = if((x<1)&(y>0.5),1E7,-1E7)
#function = if((x>1)&(y<0.5),1E7,-1E7)
#function = if((x>1)&(y>0.5),1E7,-1E7)
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[pls_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e7
density0 = 100
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[relperm]
type = PorousFlowRelativePermeabilityFLAC
phase = 0
m = 2
s_res = 0.99
sum_s_res = 0.99
[]
[]
[DiracKernels]
[pls]
type = PorousFlowPolyLineSink
fluid_phase = 0
point_file = pls03.bh
use_relative_permeability = true
line_length = 4
SumQuantityUO = pls_total_outflow_mass
variable = pp
p_or_t_vals = '0 1E7'
fluxes = '1 1'
[]
[]
[Postprocessors]
[pls_report]
type = PorousFlowPlotQuantity
uo = pls_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
indirect_dependencies = 'fluid_mass1 fluid_mass0 pls_report'
[]
[p00]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[p01]
type = PointValue
variable = pp
point = '0 1 0'
execute_on = timestep_end
[]
[p20]
type = PointValue
variable = pp
point = '2 0 0'
execute_on = timestep_end
[]
[p21]
type = PointValue
variable = pp
point = '2 1 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 pls_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 1
dt = 1
solve_type = NEWTON
[]
[Outputs]
file_base = pls03
exodus = false
csv = true
execute_on = timestep_end
[]
(modules/porous_flow/test/tests/mass_conservation/mass02.i)
# checking that the mass postprocessor correctly calculates the mass
# 1phase, 2component, constant porosity
[Mesh]
type = GeneratedMesh
dim = 1
nx = 3
xmin = -1
xmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
[]
[mass_frac_comp0]
[]
[]
[ICs]
[pinit]
type = FunctionIC
function = x
variable = pp
[]
[minit]
type = FunctionIC
function = 'x*x'
variable = mass_frac_comp0
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = mass_frac_comp0
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp mass_frac_comp0'
number_fluid_phases = 1
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 1
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
mass_fraction_vars = 'mass_frac_comp0'
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[Postprocessors]
[total_mass_0]
type = PorousFlowFluidMass
[]
[total_mass_1]
type = PorousFlowFluidMass
fluid_component = 1
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it'
petsc_options_value = 'bcgs bjacobi 1 1 10000'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
dt = 1
end_time = 1
[]
[Outputs]
execute_on = 'timestep_end'
file_base = mass02
csv = true
[]
(modules/porous_flow/test/tests/dirackernels/squarepulse1.i)
# Test PorousFlowSquarePulsePointSource DiracKernel
[Mesh]
type = GeneratedMesh
dim = 2
bias_x = 1.1
bias_y = 1.1
ymax = 1
xmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = pp
number_fluid_phases = 1
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.2
[]
[]
[Postprocessors]
[total_mass]
type = PorousFlowFluidMass
execute_on = 'initial timestep_end'
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
[]
[]
[Executioner]
type = Transient
solve_type = Newton
nl_abs_tol = 1e-14
dt = 200
end_time = 2000
[]
[Outputs]
perf_graph = true
file_base = squarepulse1
csv = true
execute_on = 'initial timestep_end'
[con]
output_linear = true
type = Console
[]
[]
[ICs]
[PressureIC]
variable = pp
type = ConstantIC
value = 20e6
[]
[]
[DiracKernels]
[sink1]
type = PorousFlowSquarePulsePointSource
start_time = 100
end_time = 300
point = '0.5 0.5 0'
mass_flux = -0.1
variable = pp
[]
[sink]
type = PorousFlowSquarePulsePointSource
start_time = 600
end_time = 1400
point = '0.5 0.5 0'
mass_flux = -0.1
variable = pp
[]
[source]
point = '0.5 0.5 0'
start_time = 1500
mass_flux = 0.2
end_time = 2000
variable = pp
type = PorousFlowSquarePulsePointSource
[]
[]
(modules/porous_flow/test/tests/gravity/grav02e.i)
# Checking that gravity head is established in the transient situation when 0<=saturation<=1 (note the less-than-or-equal-to).
# 2phase (PS), 2components, constant capillary pressure, constant fluid bulk-moduli for each phase, constant viscosity,
# constant permeability, Corey relative permeabilities with no residual saturation
[Mesh]
type = GeneratedMesh
dim = 2
ny = 10
ymax = 100
[]
[GlobalParams]
PorousFlowDictator = dictator
gravity = '0 -10 0'
[]
[Variables]
[ppwater]
initial_condition = 1.5e6
[]
[sgas]
initial_condition = 0.3
[]
[]
[AuxVariables]
[massfrac_ph0_sp0]
initial_condition = 1
[]
[massfrac_ph1_sp0]
initial_condition = 0
[]
[ppgas]
family = MONOMIAL
order = FIRST
[]
[swater]
family = MONOMIAL
order = FIRST
[]
[relpermwater]
family = MONOMIAL
order = FIRST
[]
[relpermgas]
family = MONOMIAL
order = FIRST
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = ppwater
[]
[flux0]
type = PorousFlowAdvectiveFlux
fluid_component = 0
variable = ppwater
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = sgas
[]
[flux1]
type = PorousFlowAdvectiveFlux
fluid_component = 1
variable = sgas
[]
[]
[AuxKernels]
[ppgas]
type = PorousFlowPropertyAux
property = pressure
phase = 1
variable = ppgas
[]
[swater]
type = PorousFlowPropertyAux
property = saturation
phase = 0
variable = swater
[]
[relpermwater]
type = PorousFlowPropertyAux
property = relperm
phase = 0
variable = relpermwater
[]
[relpermgas]
type = PorousFlowPropertyAux
property = relperm
phase = 1
variable = relpermgas
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'ppwater sgas'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureConst
pc = 1e5
[]
[]
[FluidProperties]
[simple_fluid0]
type = SimpleFluidProperties
bulk_modulus = 2e9
density0 = 1000
viscosity = 1e-3
thermal_expansion = 0
[]
[simple_fluid1]
type = SimpleFluidProperties
bulk_modulus = 2e9
density0 = 10
viscosity = 1e-5
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow2PhasePS
phase0_porepressure = ppwater
phase1_saturation = sgas
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
mass_fraction_vars = 'massfrac_ph0_sp0 massfrac_ph1_sp0'
[]
[simple_fluid0]
type = PorousFlowSingleComponentFluid
fp = simple_fluid0
phase = 0
[]
[simple_fluid1]
type = PorousFlowSingleComponentFluid
fp = simple_fluid1
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-11 0 0 0 1e-11 0 0 0 1e-11'
[]
[relperm_water]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[relperm_gas]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 1
[]
[]
[Postprocessors]
[mass_ph0]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
[]
[mass_ph1]
type = PorousFlowFluidMass
fluid_component = 1
execute_on = 'initial timestep_end'
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol'
petsc_options_value = 'bcgs bjacobi 1E-12 1E-10'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
end_time = 1e5
[TimeStepper]
type = IterationAdaptiveDT
dt = 1e4
[]
[]
[Outputs]
execute_on = 'initial timestep_end'
file_base = grav02e
exodus = true
perf_graph = true
csv = false
[]
(modules/porous_flow/test/tests/gravity/grav02a.i)
# Checking that gravity head is established in the transient situation when 0<saturation<1 (note the strictly less-than).
# 2phase (PP), 2components, vanGenuchten, constant fluid bulk-moduli for each phase, constant viscosity, constant permeability, Corey relative perm
# For better agreement with the analytical solution (ana_pp), just increase nx
[Mesh]
type = GeneratedMesh
dim = 1
nx = 10
xmin = -1
xmax = 0
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[ppwater]
initial_condition = -1.0
[]
[ppgas]
initial_condition = 0
[]
[]
[AuxVariables]
[massfrac_ph0_sp0]
initial_condition = 1
[]
[massfrac_ph1_sp0]
initial_condition = 0
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = ppwater
[]
[flux0]
type = PorousFlowAdvectiveFlux
fluid_component = 0
variable = ppwater
gravity = '-1 0 0'
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = ppgas
[]
[flux1]
type = PorousFlowAdvectiveFlux
fluid_component = 1
variable = ppgas
gravity = '-1 0 0'
[]
[]
[Functions]
[ana_ppwater]
type = ParsedFunction
symbol_names = 'g B p0 rho0'
symbol_values = '1 2 pp_water_top 1'
expression = '-B*log(exp(-p0/B)+g*rho0*x/B)' # expected pp at base
[]
[ana_ppgas]
type = ParsedFunction
symbol_names = 'g B p0 rho0'
symbol_values = '1 1 pp_gas_top 0.1'
expression = '-B*log(exp(-p0/B)+g*rho0*x/B)' # expected pp at base
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'ppwater ppgas'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1
[]
[]
[FluidProperties]
[simple_fluid0]
type = SimpleFluidProperties
bulk_modulus = 2
density0 = 1
viscosity = 1
thermal_expansion = 0
[]
[simple_fluid1]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 0.1
viscosity = 0.5
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow2PhasePP
phase0_porepressure = ppwater
phase1_porepressure = ppgas
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
mass_fraction_vars = 'massfrac_ph0_sp0 massfrac_ph1_sp0'
[]
[simple_fluid0]
type = PorousFlowSingleComponentFluid
fp = simple_fluid0
phase = 0
[]
[simple_fluid1]
type = PorousFlowSingleComponentFluid
fp = simple_fluid1
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1 0 0 0 2 0 0 0 3'
[]
[relperm_water]
type = PorousFlowRelativePermeabilityCorey
n = 1
phase = 0
[]
[relperm_gas]
type = PorousFlowRelativePermeabilityCorey
n = 1
phase = 1
[]
[]
[Postprocessors]
[pp_water_top]
type = PointValue
variable = ppwater
point = '0 0 0'
[]
[pp_water_base]
type = PointValue
variable = ppwater
point = '-1 0 0'
[]
[pp_water_analytical]
type = FunctionValuePostprocessor
function = ana_ppwater
point = '-1 0 0'
[]
[pp_gas_top]
type = PointValue
variable = ppgas
point = '0 0 0'
[]
[pp_gas_base]
type = PointValue
variable = ppgas
point = '-1 0 0'
[]
[pp_gas_analytical]
type = FunctionValuePostprocessor
function = ana_ppgas
point = '-1 0 0'
[]
[mass_ph0]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
[]
[mass_ph1]
type = PorousFlowFluidMass
fluid_component = 1
execute_on = 'initial timestep_end'
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
[]
[]
[Executioner]
type = Transient
solve_type = Newton
dt = 0.1
end_time = 1.0
nl_rel_tol = 1E-10
nl_abs_tol = 1E-12
[]
[Outputs]
[csv]
type = CSV
file_base = grav02a
execute_on = 'initial final'
[]
[]
(modules/porous_flow/test/tests/dirackernels/bh05.i)
# unsaturated
# injection
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = 1
xmax = 3
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Functions]
[dts]
type = PiecewiseLinear
y = '500 500 1E1'
x = '4000 5000 6500'
[]
[]
[Variables]
[pp]
initial_condition = -2E5
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.8
alpha = 1e-5
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-12 0 0 0 1E-12 0 0 0 1E-12'
[]
[relperm]
type = PorousFlowRelativePermeabilityFLAC
m = 2
phase = 0
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
variable = pp
SumQuantityUO = borehole_total_outflow_mass
point_file = bh03.bh
fluid_phase = 0
bottom_p_or_t = 0
unit_weight = '0 0 0'
use_mobility = true
character = -1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
indirect_dependencies = 'fluid_mass1 fluid_mass0 bh_report'
[]
[p0]
type = PointValue
variable = pp
point = '2 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 6500
solve_type = NEWTON
[TimeStepper]
type = FunctionDT
function = dts
[]
[]
[Outputs]
file_base = bh05
exodus = false
csv = true
execute_on = timestep_end
[]
(modules/porous_flow/test/tests/gravity/grav02g.i)
# Checking that gravity head is established in the transient situation when 0<=saturation<=1 (note the less-than-or-equal-to).
# 2phase (PS), 2components, Brooks-Corey capillary pressure, constant fluid bulk-moduli for each phase, constant viscosity,
# constant permeability, Brooks-Corey relative permeabilities with residual saturation
[Mesh]
type = GeneratedMesh
dim = 2
ny = 10
ymax = 100
[]
[GlobalParams]
PorousFlowDictator = dictator
gravity = '0 -10 0'
[]
[Variables]
[ppwater]
initial_condition = 1.5e6
[]
[sgas]
initial_condition = 0.3
[]
[]
[AuxVariables]
[massfrac_ph0_sp0]
initial_condition = 1
[]
[massfrac_ph1_sp0]
initial_condition = 0
[]
[ppgas]
family = MONOMIAL
order = CONSTANT
[]
[swater]
family = MONOMIAL
order = CONSTANT
[]
[relpermwater]
family = MONOMIAL
order = CONSTANT
[]
[relpermgas]
family = MONOMIAL
order = CONSTANT
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = ppwater
[]
[flux0]
type = PorousFlowAdvectiveFlux
fluid_component = 0
variable = ppwater
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = sgas
[]
[flux1]
type = PorousFlowAdvectiveFlux
fluid_component = 1
variable = sgas
[]
[]
[AuxKernels]
[ppgas]
type = PorousFlowPropertyAux
property = pressure
phase = 1
variable = ppgas
[]
[swater]
type = PorousFlowPropertyAux
property = saturation
phase = 0
variable = swater
[]
[relpermwater]
type = MaterialStdVectorAux
property = PorousFlow_relative_permeability_qp
index = 0
variable = relpermwater
[]
[relpermgas]
type = PorousFlowPropertyAux
property = relperm
phase = 1
variable = relpermgas
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'ppwater sgas'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureBC
lambda = 2
pe = 1e4
[]
[]
[FluidProperties]
[simple_fluid0]
type = SimpleFluidProperties
bulk_modulus = 2e9
density0 = 1000
viscosity = 1e-3
thermal_expansion = 0
[]
[simple_fluid1]
type = SimpleFluidProperties
bulk_modulus = 2e9
density0 = 10
viscosity = 1e-5
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow2PhasePS
phase0_porepressure = ppwater
phase1_saturation = sgas
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
mass_fraction_vars = 'massfrac_ph0_sp0 massfrac_ph1_sp0'
[]
[simple_fluid0]
type = PorousFlowSingleComponentFluid
fp = simple_fluid0
phase = 0
[]
[simple_fluid1]
type = PorousFlowSingleComponentFluid
fp = simple_fluid1
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-11 0 0 0 1e-11 0 0 0 1e-11'
[]
[relperm_water]
type = PorousFlowRelativePermeabilityBC
lambda = 2
phase = 0
s_res = 0.25
sum_s_res = 0.35
[]
[relperm_gas]
type = PorousFlowRelativePermeabilityBC
lambda = 2
phase = 1
s_res = 0.1
sum_s_res = 0.35
nw_phase = true
[]
[]
[Postprocessors]
[mass_ph0]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
[]
[mass_ph1]
type = PorousFlowFluidMass
fluid_component = 1
execute_on = 'initial timestep_end'
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_stol -snes_max_it'
petsc_options_value = 'bcgs bjacobi 1E-13 15'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
end_time = 1e5
[TimeStepper]
type = IterationAdaptiveDT
dt = 5e3
[]
[]
[Outputs]
execute_on = 'initial timestep_end'
file_base = grav02g
exodus = true
perf_graph = true
csv = false
[]
(modules/porous_flow/test/tests/mass_conservation/mass06.i)
# Checking that the mass postprocessor correctly calculates the mass
# of each component in each phase, as well as the total mass of each
# component in all phases. Also tests that optional saturation threshold
# gives the correct mass
# 2phase, 2component, constant porosity
# saturation_threshold set to 0.6 for phase 1
[Mesh]
type = GeneratedMesh
dim = 1
nx = 10
xmin = 0
xmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
[]
[sat]
[]
[]
[AuxVariables]
[massfrac_ph0_sp0]
initial_condition = 1
[]
[massfrac_ph1_sp0]
initial_condition = 0
[]
[]
[ICs]
[pinit]
type = ConstantIC
value = 1
variable = pp
[]
[satinit]
type = FunctionIC
function = 1-x
variable = sat
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = sat
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp sat'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureConst
pc = 0
[]
[]
[FluidProperties]
[simple_fluid0]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 1
thermal_expansion = 0
[]
[simple_fluid1]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 0.1
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow2PhasePS
phase0_porepressure = pp
phase1_saturation = sat
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
mass_fraction_vars = 'massfrac_ph0_sp0 massfrac_ph1_sp0'
[]
[simple_fluid0]
type = PorousFlowSingleComponentFluid
fp = simple_fluid0
phase = 0
[]
[simple_fluid1]
type = PorousFlowSingleComponentFluid
fp = simple_fluid1
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[Postprocessors]
[comp0_phase0_mass]
type = PorousFlowFluidMass
fluid_component = 0
phase = 0
[]
[comp0_phase1_mass]
type = PorousFlowFluidMass
fluid_component = 0
phase = 1
[]
[comp0_total_mass]
type = PorousFlowFluidMass
fluid_component = 0
[]
[comp1_phase0_mass]
type = PorousFlowFluidMass
fluid_component = 1
phase = 0
[]
[comp1_phase1_mass]
type = PorousFlowFluidMass
fluid_component = 1
phase = 1
[]
[comp1_total_mass]
type = PorousFlowFluidMass
fluid_component = 1
[]
[comp1_phase1_threshold_mass]
type = PorousFlowFluidMass
fluid_component = 1
phase = 1
saturation_threshold = 0.6
[]
[]
[Executioner]
type = Transient
solve_type = Newton
nl_abs_tol = 1e-16
dt = 1
end_time = 1
[]
[Outputs]
execute_on = 'timestep_end'
file_base = mass06
csv = true
[]
(modules/porous_flow/test/tests/dirackernels/bh02.i)
# fully-saturated
# production
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[]
[UserObjects]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-12 0 0 0 1E-12 0 0 0 1E-12'
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
# Because the Variable for this Sink is pp, and pp is associated
# with the fluid-mass conservation equation, this sink is extracting
# fluid mass (and not heat energy or something else)
variable = pp
# The following specfies that the total fluid mass coming out of
# the porespace via this sink in this timestep should be recorded
# in the pls_total_outflow_mass UserObject
SumQuantityUO = borehole_total_outflow_mass
# The following file defines the polyline geometry
# which is just two points in this particular example
point_file = bh02.bh
# First, we want Peacemans f to be a function of porepressure (and not
# temperature or something else). So bottom_p_or_t is actually porepressure
function_of = pressure
fluid_phase = 0
# The bottomhole pressure
bottom_p_or_t = 0
# In this example there is no increase of the wellbore pressure
# due to gravity:
unit_weight = '0 0 0'
# PeacemanBoreholes should almost always have use_mobility = true
use_mobility = true
# This is a production wellbore (a sink of fluid that removes fluid from porespace)
character = 1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
indirect_dependencies = 'fluid_mass1 fluid_mass0 bh_report'
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 0.5
dt = 1E-2
solve_type = NEWTON
[]
[Outputs]
file_base = bh02
exodus = false
csv = true
execute_on = timestep_end
[]
(modules/porous_flow/test/tests/fluidstate/theis.i)
# Two phase Theis problem: Flow from single source using WaterNCG fluidstate.
# Constant rate injection 2 kg/s
# 1D cylindrical mesh
# Initially, system has only a liquid phase, until enough gas is injected
# to form a gas phase, in which case the system becomes two phase.
[Mesh]
type = GeneratedMesh
dim = 1
nx = 40
xmax = 200
bias_x = 1.05
coord_type = RZ
rz_coord_axis = Y
[]
[GlobalParams]
PorousFlowDictator = dictator
gravity = '0 0 0'
[]
[AuxVariables]
[saturation_gas]
order = CONSTANT
family = MONOMIAL
[]
[x1]
order = CONSTANT
family = MONOMIAL
[]
[y0]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[saturation_gas]
type = PorousFlowPropertyAux
variable = saturation_gas
property = saturation
phase = 1
execute_on = timestep_end
[]
[x1]
type = PorousFlowPropertyAux
variable = x1
property = mass_fraction
phase = 0
fluid_component = 1
execute_on = timestep_end
[]
[y0]
type = PorousFlowPropertyAux
variable = y0
property = mass_fraction
phase = 1
fluid_component = 0
execute_on = timestep_end
[]
[]
[Variables]
[pgas]
initial_condition = 20e6
[]
[zi]
initial_condition = 0
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pgas
[]
[flux0]
type = PorousFlowAdvectiveFlux
fluid_component = 0
variable = pgas
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = zi
[]
[flux1]
type = PorousFlowAdvectiveFlux
fluid_component = 1
variable = zi
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pgas zi'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureConst
pc = 0
[]
[fs]
type = PorousFlowWaterNCG
water_fp = water
gas_fp = co2
capillary_pressure = pc
[]
[]
[FluidProperties]
[co2]
type = CO2FluidProperties
[]
[water]
type = Water97FluidProperties
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
temperature = 20
[]
[waterncg]
type = PorousFlowFluidState
gas_porepressure = pgas
z = zi
temperature_unit = Celsius
capillary_pressure = pc
fluid_state = fs
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.2
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-12 0 0 0 1e-12 0 0 0 1e-12'
[]
[relperm_water]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
s_res = 0.1
sum_s_res = 0.1
[]
[relperm_gas]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 1
[]
[]
[BCs]
[rightwater]
type = DirichletBC
boundary = right
value = 20e6
variable = pgas
[]
[]
[DiracKernels]
[source]
type = PorousFlowSquarePulsePointSource
point = '0 0 0'
mass_flux = 2
variable = zi
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
petsc_options = '-snes_converged_reason -ksp_diagonal_scale -ksp_diagonal_scale_fix -ksp_gmres_modifiedgramschmidt -snes_linesearch_monitor'
petsc_options_iname = '-ksp_type -pc_type -sub_pc_type -sub_pc_factor_shift_type -pc_asm_overlap -snes_atol -snes_rtol -snes_max_it'
petsc_options_value = 'gmres asm lu NONZERO 2 1E-8 1E-10 20'
[]
[]
[Executioner]
type = Transient
solve_type = NEWTON
end_time = 2e2
[TimeStepper]
type = IterationAdaptiveDT
dt = 10
growth_factor = 2
[]
[]
[VectorPostprocessors]
[line]
type = NodalValueSampler
sort_by = x
variable = 'pgas zi'
execute_on = 'timestep_end'
[]
[]
[Postprocessors]
[pgas]
type = PointValue
point = '1 0 0'
variable = pgas
[]
[sgas]
type = PointValue
point = '1 0 0'
variable = saturation_gas
[]
[zi]
type = PointValue
point = '1 0 0'
variable = zi
[]
[massgas]
type = PorousFlowFluidMass
fluid_component = 1
[]
[x1]
type = PointValue
point = '1 0 0'
variable = x1
[]
[y0]
type = PointValue
point = '1 0 0'
variable = y0
[]
[]
[Outputs]
print_linear_residuals = false
perf_graph = true
[csvout]
type = CSV
execute_on = timestep_end
execute_vector_postprocessors_on = final
[]
[]
(modules/porous_flow/test/tests/sinks/s08.i)
# apply a sink flux on just one component of a 3-component, 2-phase system and observe the correct behavior
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = 0
xmax = 1
ymin = 0
ymax = 1
zmin = 0
zmax = 2
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pwater frac_ph0_c0 pgas'
number_fluid_phases = 2
number_fluid_components = 3
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1.1
[]
[]
[Variables]
[pwater]
[]
[frac_ph0_c0]
initial_condition = 0.3
[]
[pgas]
[]
[]
[ICs]
[pwater]
type = FunctionIC
variable = pwater
function = y
[]
[pgas]
type = FunctionIC
variable = pgas
function = y+3
[]
[]
[Kernels]
[mass_c0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = frac_ph0_c0
[]
[mass_c1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = pwater
[]
[mass_c2]
type = PorousFlowMassTimeDerivative
fluid_component = 2
variable = pgas
[]
[]
[FluidProperties]
[simple_fluid0]
type = SimpleFluidProperties
bulk_modulus = 2.3
density0 = 1.5
thermal_expansion = 0
viscosity = 2.1
[]
[simple_fluid1]
type = SimpleFluidProperties
bulk_modulus = 1.3
density0 = 1.1
thermal_expansion = 0
viscosity = 1.1
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow2PhasePP
phase0_porepressure = pwater
phase1_porepressure = pgas
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
mass_fraction_vars = 'frac_ph0_c0 frac_ph0_c1 frac_ph1_c0 frac_ph1_c1'
[]
[simple_fluid0]
type = PorousFlowSingleComponentFluid
fp = simple_fluid0
phase = 0
[]
[simple_fluid1]
type = PorousFlowSingleComponentFluid
fp = simple_fluid1
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '0.2 0 0 0 0.1 0 0 0 0.1'
[]
[relperm0]
type = PorousFlowRelativePermeabilityCorey
n = 1
phase = 0
[]
[relperm1]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 1
[]
[]
[AuxVariables]
[flux_out]
[]
[frac_ph0_c1]
initial_condition = 0.35
[]
[frac_ph1_c0]
initial_condition = 0.1
[]
[frac_ph1_c1]
initial_condition = 0.8
[]
[]
[Functions]
[mass1_00]
type = ParsedFunction
expression = 'fgas*vol*por*dens0gas*exp(pgas/bulkgas)*(1-pow(1+pow(al*(pgas-pwater),1.0/(1-m)),-m))+fwater*vol*por*dens0water*exp(pwater/bulkwater)*(pow(1+pow(al*(pgas-pwater),1.0/(1-m)),-m))'
symbol_names = 'vol por dens0gas pgas pwater bulkgas al m dens0water bulkwater fgas fwater'
symbol_values = '0.25 0.1 1.1 pgas_00 pwater_00 1.3 1.1 0.5 1.5 2.3 frac_ph1_c1_00 frac_ph0_c1_00'
[]
[expected_mass_change1_00]
type = ParsedFunction
expression = 'frac*fcn*area*dt*pow(1-pow(1+pow(al*(pgas-pwater),1.0/(1-m)),-m), 2)'
symbol_names = 'frac fcn area dt pgas pwater al m'
symbol_values = 'frac_ph1_c1_00 100 0.5 1E-3 pgas_00 pwater_00 1.1 0.5'
[]
[mass1_00_expect]
type = ParsedFunction
expression = 'mass_prev-mass_change'
symbol_names = 'mass_prev mass_change'
symbol_values = 'm1_00_prev del_m1_00'
[]
[]
[Postprocessors]
[total_mass_comp0]
type = PorousFlowFluidMass
fluid_component = 0
[]
[total_mass_comp1]
type = PorousFlowFluidMass
fluid_component = 1
[]
[total_mass_comp2]
type = PorousFlowFluidMass
fluid_component = 2
[]
[frac_ph1_c1_00]
type = PointValue
point = '0 0 0'
variable = frac_ph1_c1
execute_on = 'initial timestep_end'
[]
[frac_ph0_c1_00]
type = PointValue
point = '0 0 0'
variable = frac_ph0_c1
execute_on = 'initial timestep_end'
[]
[flux_00]
type = PointValue
point = '0 0 0'
variable = flux_out
execute_on = 'initial timestep_end'
[]
[pgas_00]
type = PointValue
point = '0 0 0'
variable = pgas
execute_on = 'initial timestep_end'
[]
[pwater_00]
type = PointValue
point = '0 0 0'
variable = pwater
execute_on = 'initial timestep_end'
[]
[m1_00]
type = FunctionValuePostprocessor
function = mass1_00
execute_on = 'initial timestep_end'
[]
[m1_00_prev]
type = FunctionValuePostprocessor
function = mass1_00
execute_on = 'timestep_begin'
outputs = 'console'
[]
[del_m1_00]
type = FunctionValuePostprocessor
function = expected_mass_change1_00
execute_on = 'timestep_end'
outputs = 'console'
[]
[m1_00_expect]
type = FunctionValuePostprocessor
function = mass1_00_expect
execute_on = 'timestep_end'
[]
[]
[BCs]
[flux_ph1_c1]
type = PorousFlowSink
boundary = 'left'
variable = pwater # sink applied to the mass_c1 Kernel
use_mobility = false
use_relperm = true
mass_fraction_component = 1
fluid_phase = 1
flux_function = 100
save_in = flux_out
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -sub_pc_type -snes_max_it -sub_pc_factor_shift_type -pc_asm_overlap'
petsc_options_value = 'gmres asm lu 100 NONZERO 2'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
dt = 1E-3
end_time = 0.01
nl_rel_tol = 1E-12
nl_abs_tol = 1E-12
[]
[Outputs]
file_base = s08
exodus = true
[console]
type = Console
execute_on = 'nonlinear linear'
[]
[csv]
type = CSV
execute_on = 'timestep_end'
[]
[]
(modules/porous_flow/test/tests/dirackernels/pls03_action.i)
# Test that the upwinding works correctly.
#
# A poly-line sink sits at the centre of the element.
# It has length=4 and weight=0.5, and extracts fluid
# at a constant rate of
# (1 * relative_permeability) kg.m^-1.s^-1
# Since it sits at the centre of the element, it extracts
# equally from each node, so the rate of extraction from
# each node is
# (0.5 * relative_permeability) kg.s^-1
# including the length and weight effects.
#
# There is no fluid flow.
#
# The initial conditions are such that all nodes have
# relative_permeability=0, except for one which has
# relative_permeaility = 1. Therefore, all nodes should
# remain at their initial porepressure, except the one.
#
# The porosity is 0.1, and the elemental volume is 2,
# so the fluid mass at the node in question = 0.2 * density / 4,
# where the 4 is the number of nodes in the element.
# In this simulation density = dens0 * exp(P / bulk), with
# dens0 = 100, and bulk = 20 MPa.
# The initial porepressure P0 = 10 MPa, so the final (after
# 1 second of simulation) is
# P(t=1) = 8.748592 MPa
[Mesh]
type = GeneratedMesh
dim = 2
nx = 1
ny = 1
xmin = 0
xmax = 2
ymin = 0
ymax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
[]
[]
[FluidProperties]
[the_simple_fluid]
type = SimpleFluidProperties
thermal_expansion = 0.0
bulk_modulus = 2.0E7
viscosity = 1.0
density0 = 100.0
[]
[]
[PorousFlowUnsaturated]
porepressure = pp
gravity = '0 0 0'
fp = the_simple_fluid
van_genuchten_alpha = 1.0E-7
van_genuchten_m = 0.5
relative_permeability_exponent = 2
residual_saturation = 0.99
[]
[ICs]
[pp]
type = FunctionIC
variable = pp
#function = if((x<1)&(y<0.5),1E7,-1E7)
function = if((x<1)&(y>0.5),1E7,-1E7)
#function = if((x>1)&(y<0.5),1E7,-1E7)
#function = if((x>1)&(y>0.5),1E7,-1E7)
[]
[]
[UserObjects]
[pls_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[]
[Materials]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '0 0 0 0 0 0 0 0 0'
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[DiracKernels]
[pls]
type = PorousFlowPolyLineSink
fluid_phase = 0
point_file = pls03.bh
use_relative_permeability = true
line_length = 4
SumQuantityUO = pls_total_outflow_mass
variable = pp
p_or_t_vals = '0 1E7'
fluxes = '1 1'
[]
[]
[Postprocessors]
[pls_report]
type = PorousFlowPlotQuantity
uo = pls_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
indirect_dependencies = 'fluid_mass1 fluid_mass0 pls_report'
[]
[p00]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[p01]
type = PointValue
variable = pp
point = '0 1 0'
execute_on = timestep_end
[]
[p20]
type = PointValue
variable = pp
point = '2 0 0'
execute_on = timestep_end
[]
[p21]
type = PointValue
variable = pp
point = '2 1 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 pls_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 1
dt = 1
solve_type = NEWTON
[]
[Outputs]
file_base = pls03_action
exodus = false
csv = true
execute_on = timestep_end
[]
(modules/porous_flow/test/tests/fluidstate/theis_brineco2_nonisothermal.i)
# Two phase nonisothermal Theis problem: Flow from single source.
# Constant rate injection 2 kg/s of cold CO2 into warm reservoir
# 1D cylindrical mesh
# Initially, system has only a liquid phase, until enough gas is injected
# to form a gas phase, in which case the system becomes two phase.
[Mesh]
[mesh]
type = GeneratedMeshGenerator
dim = 1
nx = 40
xmin = 0.1
xmax = 200
bias_x = 1.05
[]
coord_type = RZ
rz_coord_axis = Y
[]
[GlobalParams]
PorousFlowDictator = dictator
gravity = '0 0 0'
[]
[AuxVariables]
[saturation_gas]
order = CONSTANT
family = MONOMIAL
[]
[x1]
order = CONSTANT
family = MONOMIAL
[]
[y0]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[saturation_gas]
type = PorousFlowPropertyAux
variable = saturation_gas
property = saturation
phase = 1
execute_on = timestep_end
[]
[x1]
type = PorousFlowPropertyAux
variable = x1
property = mass_fraction
phase = 0
fluid_component = 1
execute_on = timestep_end
[]
[y0]
type = PorousFlowPropertyAux
variable = y0
property = mass_fraction
phase = 1
fluid_component = 0
execute_on = timestep_end
[]
[]
[Variables]
[pgas]
initial_condition = 20e6
[]
[zi]
initial_condition = 0
[]
[xnacl]
initial_condition = 0.1
[]
[temperature]
initial_condition = 70
scaling = 1e-4
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pgas
[]
[flux0]
type = PorousFlowAdvectiveFlux
fluid_component = 0
variable = pgas
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = zi
[]
[flux1]
type = PorousFlowAdvectiveFlux
fluid_component = 1
variable = zi
[]
[mass2]
type = PorousFlowMassTimeDerivative
fluid_component = 2
variable = xnacl
[]
[flux2]
type = PorousFlowAdvectiveFlux
fluid_component = 2
variable = xnacl
[]
[energy]
type = PorousFlowEnergyTimeDerivative
variable = temperature
[]
[heatadv]
type = PorousFlowHeatAdvection
variable = temperature
[]
[conduction]
type = PorousFlowHeatConduction
variable = temperature
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pgas zi xnacl temperature'
number_fluid_phases = 2
number_fluid_components = 3
[]
[pc]
type = PorousFlowCapillaryPressureConst
pc = 0
[]
[fs]
type = PorousFlowBrineCO2
brine_fp = brine
co2_fp = co2
capillary_pressure = pc
[]
[]
[FluidProperties]
[co2]
type = CO2FluidProperties
[]
[brine]
type = BrineFluidProperties
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
temperature = temperature
[]
[brineco2]
type = PorousFlowFluidState
gas_porepressure = pgas
z = zi
temperature = temperature
temperature_unit = Celsius
xnacl = xnacl
capillary_pressure = pc
fluid_state = fs
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.2
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-12 0 0 0 1e-12 0 0 0 1e-12'
[]
[relperm_water]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
s_res = 0.1
sum_s_res = 0.1
[]
[relperm_gas]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 1
[]
[rockheat]
type = PorousFlowMatrixInternalEnergy
specific_heat_capacity = 1000
density = 2500
[]
[rock_thermal_conductivity]
type = PorousFlowThermalConductivityIdeal
dry_thermal_conductivity = '50 0 0 0 50 0 0 0 50'
[]
[]
[BCs]
[cold_gas]
type = DirichletBC
boundary = left
variable = temperature
value = 20
[]
[gas_injecton]
type = PorousFlowSink
boundary = left
variable = zi
flux_function = -0.159155
[]
[rightwater]
type = DirichletBC
boundary = right
value = 20e6
variable = pgas
[]
[righttemp]
type = DirichletBC
boundary = right
value = 70
variable = temperature
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -sub_pc_type -sub_pc_factor_shift_type -pc_asm_overlap'
petsc_options_value = 'gmres asm lu NONZERO 2'
[]
[]
[Executioner]
type = Transient
solve_type = NEWTON
end_time = 1e4
nl_abs_tol = 1e-7
nl_rel_tol = 1e-5
[TimeStepper]
type = IterationAdaptiveDT
dt = 1
growth_factor = 1.5
[]
[]
[Postprocessors]
[pgas]
type = PointValue
point = '2 0 0'
variable = pgas
[]
[sgas]
type = PointValue
point = '2 0 0'
variable = saturation_gas
[]
[zi]
type = PointValue
point = '2 0 0'
variable = zi
[]
[temperature]
type = PointValue
point = '2 0 0'
variable = temperature
[]
[massgas]
type = PorousFlowFluidMass
fluid_component = 1
[]
[x1]
type = PointValue
point = '2 0 0'
variable = x1
[]
[y0]
type = PointValue
point = '2 0 0'
variable = y0
[]
[]
[Outputs]
print_linear_residuals = false
perf_graph = true
csv = true
[]
(modules/porous_flow/test/tests/energy_conservation/heat03_rz.i)
# The sample is a single unit element in RZ coordinates
# A constant velocity is applied to the outer boundary: disp_r = -0.01*t.
# There is no fluid flow or heat flow.
# Heat energy conservation is checked.
# Mass conservation is checked
[Mesh]
type = GeneratedMesh
dim = 2
nx = 1
ny = 1
xmin = 1
xmax = 2
ymin = -0.5
ymax = 0.5
coord_type = RZ
[]
[GlobalParams]
displacements = 'disp_r disp_z'
PorousFlowDictator = dictator
block = 0
biot_coefficient = 0.3
[]
[Variables]
[disp_r]
[]
[disp_z]
[]
[pp]
initial_condition = 0.1
[]
[temp]
initial_condition = 10
[]
[]
[BCs]
[plane_strain]
type = DirichletBC
variable = disp_z
value = 0
boundary = 'bottom top'
[]
[rmin_fixed]
type = DirichletBC
variable = disp_r
value = 0
boundary = left
[]
[contract]
type = FunctionDirichletBC
variable = disp_r
function = -0.01*t
boundary = right
[]
[]
[PorousFlowFullySaturated]
coupling_type = ThermoHydroMechanical
porepressure = pp
temperature = temp
fp = simple_fluid
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 0.5
density0 = 1
viscosity = 1
thermal_expansion = 0
cv = 1.3
[]
[]
[Materials]
[elasticity_tensor]
type = ComputeElasticityTensor
C_ijkl = '1 1.5'
# bulk modulus is lambda + 2*mu/3 = 1 + 2*1.5/3 = 2
fill_method = symmetric_isotropic
[]
[strain]
type = ComputeAxisymmetricRZSmallStrain
[]
[stress]
type = ComputeLinearElasticStress
[]
[porosity]
type = PorousFlowPorosity
porosity_zero = 0.1
[]
[rock_heat]
type = PorousFlowMatrixInternalEnergy
specific_heat_capacity = 2.2
density = 0.5
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '0.5 0 0 0 0.5 0 0 0 0.5'
[]
[thermal_cond]
type = PorousFlowThermalConductivityIdeal
dry_thermal_conductivity = '1 0 0 0 1 0 0 0 1'
[]
[]
[Postprocessors]
[p0]
type = PointValue
outputs = 'console csv'
execute_on = 'initial timestep_end'
point = '1 0 0'
variable = pp
[]
[t0]
type = PointValue
outputs = 'console csv'
execute_on = 'initial timestep_end'
point = '1 0 0'
variable = temp
[]
[rdisp]
type = PointValue
outputs = 'csv console'
point = '2 0 0'
use_displaced_mesh = false
variable = disp_r
[]
[fluid_mass]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
outputs = 'console csv'
[]
[total_heat]
type = PorousFlowHeatEnergy
phase = 0
execute_on = 'initial timestep_end'
outputs = 'console csv'
[]
[rock_heat]
type = PorousFlowHeatEnergy
execute_on = 'initial timestep_end'
outputs = 'console csv'
[]
[fluid_heat]
type = PorousFlowHeatEnergy
include_porous_skeleton = false
phase = 0
execute_on = 'initial timestep_end'
outputs = 'console csv'
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
[]
[]
[Executioner]
type = Transient
solve_type = Newton
dt = 2
end_time = 10
[]
[Outputs]
execute_on = 'initial timestep_end'
[csv]
type = CSV
[]
[]
(modules/porous_flow/test/tests/heterogeneous_materials/constant_poroperm.i)
# Assign porosity and permeability variables from constant AuxVariables to create
# a heterogeneous model
[Mesh]
type = GeneratedMesh
dim = 3
nx = 3
ny = 3
nz = 3
xmax = 3
ymax = 3
zmax = 3
[]
[GlobalParams]
PorousFlowDictator = dictator
gravity = '0 0 -10'
[]
[Variables]
[ppwater]
initial_condition = 1.5e6
[]
[]
[AuxVariables]
[poro]
family = MONOMIAL
order = CONSTANT
[]
[permxx]
family = MONOMIAL
order = CONSTANT
[]
[permxy]
family = MONOMIAL
order = CONSTANT
[]
[permxz]
family = MONOMIAL
order = CONSTANT
[]
[permyx]
family = MONOMIAL
order = CONSTANT
[]
[permyy]
family = MONOMIAL
order = CONSTANT
[]
[permyz]
family = MONOMIAL
order = CONSTANT
[]
[permzx]
family = MONOMIAL
order = CONSTANT
[]
[permzy]
family = MONOMIAL
order = CONSTANT
[]
[permzz]
family = MONOMIAL
order = CONSTANT
[]
[poromat]
family = MONOMIAL
order = CONSTANT
[]
[permxxmat]
family = MONOMIAL
order = CONSTANT
[]
[permxymat]
family = MONOMIAL
order = CONSTANT
[]
[permxzmat]
family = MONOMIAL
order = CONSTANT
[]
[permyxmat]
family = MONOMIAL
order = CONSTANT
[]
[permyymat]
family = MONOMIAL
order = CONSTANT
[]
[permyzmat]
family = MONOMIAL
order = CONSTANT
[]
[permzxmat]
family = MONOMIAL
order = CONSTANT
[]
[permzymat]
family = MONOMIAL
order = CONSTANT
[]
[permzzmat]
family = MONOMIAL
order = CONSTANT
[]
[]
[AuxKernels]
[poromat]
type = PorousFlowPropertyAux
property = porosity
variable = poromat
[]
[permxxmat]
type = PorousFlowPropertyAux
property = permeability
variable = permxxmat
column = 0
row = 0
[]
[permxymat]
type = PorousFlowPropertyAux
property = permeability
variable = permxymat
column = 1
row = 0
[]
[permxzmat]
type = PorousFlowPropertyAux
property = permeability
variable = permxzmat
column = 2
row = 0
[]
[permyxmat]
type = PorousFlowPropertyAux
property = permeability
variable = permyxmat
column = 0
row = 1
[]
[permyymat]
type = PorousFlowPropertyAux
property = permeability
variable = permyymat
column = 1
row = 1
[]
[permyzmat]
type = PorousFlowPropertyAux
property = permeability
variable = permyzmat
column = 2
row = 1
[]
[permzxmat]
type = PorousFlowPropertyAux
property = permeability
variable = permzxmat
column = 0
row = 2
[]
[permzymat]
type = PorousFlowPropertyAux
property = permeability
variable = permzymat
column = 1
row = 2
[]
[permzzmat]
type = PorousFlowPropertyAux
property = permeability
variable = permzzmat
column = 2
row = 2
[]
[]
[ICs]
[poro]
type = RandomIC
seed = 0
variable = poro
max = 0.5
min = 0.1
[]
[permx]
type = FunctionIC
function = permx
variable = permxx
[]
[permy]
type = FunctionIC
function = permy
variable = permyy
[]
[permz]
type = FunctionIC
function = permz
variable = permzz
[]
[]
[Functions]
[permx]
type = ParsedFunction
expression = '(1+x)*1e-11'
[]
[permy]
type = ParsedFunction
expression = '(1+y)*1e-11'
[]
[permz]
type = ParsedFunction
expression = '(1+z)*1e-11'
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
variable = ppwater
[]
[flux0]
type = PorousFlowAdvectiveFlux
variable = ppwater
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'ppwater'
number_fluid_phases = 1
number_fluid_components = 1
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
density0 = 1000
viscosity = 1e-3
thermal_expansion = 0
cv = 2
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseFullySaturated
porepressure = ppwater
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = poro
[]
[permeability]
type = PorousFlowPermeabilityConstFromVar
perm_xx = permxx
perm_yy = permyy
perm_zz = permzz
[]
[relperm_water]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[]
[Postprocessors]
[mass_ph0]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol'
petsc_options_value = 'bcgs bjacobi 1E-12 1E-10'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
end_time = 100
dt = 100
[]
[Outputs]
execute_on = 'initial timestep_end'
exodus = true
perf_graph = true
[]
(modules/porous_flow/test/tests/mass_conservation/mass08.i)
# Checking that the mass postprocessor throws the correct error when a given phase index
# is too large
[Mesh]
type = GeneratedMesh
dim = 1
nx = 10
xmin = 0
xmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
[]
[sat]
[]
[]
[AuxVariables]
[massfrac_ph0_sp0]
initial_condition = 1
[]
[massfrac_ph1_sp0]
initial_condition = 0
[]
[]
[ICs]
[pinit]
type = ConstantIC
value = 1
variable = pp
[]
[satinit]
type = FunctionIC
function = 1-x
variable = sat
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = sat
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp sat'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1
[]
[]
[FluidProperties]
[simple_fluid0]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 1
thermal_expansion = 0
[]
[simple_fluid1]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 0.1
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow2PhasePS
phase0_porepressure = pp
phase1_saturation = sat
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
mass_fraction_vars = 'massfrac_ph0_sp0 massfrac_ph1_sp0'
[]
[simple_fluid0]
type = PorousFlowSingleComponentFluid
fp = simple_fluid0
phase = 0
[]
[simple_fluid1]
type = PorousFlowSingleComponentFluid
fp = simple_fluid1
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[Postprocessors]
[comp1_total_mass]
type = PorousFlowFluidMass
fluid_component = 1
phase = 2
[]
[]
[Executioner]
type = Transient
solve_type = Newton
dt = 1
end_time = 1
[]
(modules/porous_flow/test/tests/fluidstate/water_vapor_phasechange.i)
# Tests correct calculation of properties in PorousFlowWaterVapor as a phase change
# from liquid to a two-phase model occurs due to a pressure drop.
# A single 10 m^3 element is used, with constant mass and heat production using
# a Dirac kernel. Initial conditions correspond to just outside the two-phase region in
# the liquid state.
#
# An identical problem can be run using TOUGH2, with the following outputs after 1,000s
# Pressure: 8.58 Mpa
# Temperature: 299.92 K
# Vapor saturation: 0.00637
[Mesh]
type = GeneratedMesh
dim = 3
xmax = 10
ymax = 10
zmax = 10
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pliq]
initial_condition = 9e6
[]
[h]
scaling = 1e-3
[]
[]
[ICs]
[hic]
type = PorousFlowFluidPropertyIC
variable = h
porepressure = pliq
property = enthalpy
temperature = 300
temperature_unit = Celsius
fp = water
[]
[]
[DiracKernels]
[mass]
type = ConstantPointSource
point = '5 5 5'
variable = pliq
value = -1
[]
[heat]
type = ConstantPointSource
point = '5 5 5'
variable = h
value = -1.344269e6
[]
[]
[AuxVariables]
[pressure_gas]
order = CONSTANT
family = MONOMIAL
[]
[pressure_water]
order = CONSTANT
family = MONOMIAL
[]
[enthalpy_gas]
order = CONSTANT
family = MONOMIAL
[]
[enthalpy_water]
order = CONSTANT
family = MONOMIAL
[]
[saturation_gas]
order = CONSTANT
family = MONOMIAL
[]
[saturation_water]
order = CONSTANT
family = MONOMIAL
[]
[density_water]
order = CONSTANT
family = MONOMIAL
[]
[density_gas]
order = CONSTANT
family = MONOMIAL
[]
[viscosity_water]
order = CONSTANT
family = MONOMIAL
[]
[viscosity_gas]
order = CONSTANT
family = MONOMIAL
[]
[temperature]
order = CONSTANT
family = MONOMIAL
[]
[e_gas]
order = CONSTANT
family = MONOMIAL
[]
[e_water]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[enthalpy_water]
type = PorousFlowPropertyAux
variable = enthalpy_water
property = enthalpy
phase = 0
execute_on = 'initial timestep_end'
[]
[enthalpy_gas]
type = PorousFlowPropertyAux
variable = enthalpy_gas
property = enthalpy
phase = 1
execute_on = 'initial timestep_end'
[]
[pressure_water]
type = PorousFlowPropertyAux
variable = pressure_water
property = pressure
phase = 0
execute_on = 'initial timestep_end'
[]
[pressure_gas]
type = PorousFlowPropertyAux
variable = pressure_gas
property = pressure
phase = 1
execute_on = 'initial timestep_end'
[]
[saturation_water]
type = PorousFlowPropertyAux
variable = saturation_water
property = saturation
phase = 0
execute_on = 'initial timestep_end'
[]
[saturation_gas]
type = PorousFlowPropertyAux
variable = saturation_gas
property = saturation
phase = 1
execute_on = 'initial timestep_end'
[]
[density_water]
type = PorousFlowPropertyAux
variable = density_water
property = density
phase = 0
execute_on = 'initial timestep_end'
[]
[density_gas]
type = PorousFlowPropertyAux
variable = density_gas
property = density
phase = 1
execute_on = 'initial timestep_end'
[]
[viscosity_water]
type = PorousFlowPropertyAux
variable = viscosity_water
property = viscosity
phase = 0
execute_on = 'initial timestep_end'
[]
[viscosity_gas]
type = PorousFlowPropertyAux
variable = viscosity_gas
property = viscosity
phase = 1
execute_on = 'initial timestep_end'
[]
[temperature]
type = PorousFlowPropertyAux
variable = temperature
property = temperature
execute_on = 'initial timestep_end'
[]
[e_water]
type = PorousFlowPropertyAux
variable = e_water
property = internal_energy
phase = 0
execute_on = 'initial timestep_end'
[]
[egas]
type = PorousFlowPropertyAux
variable = e_gas
property = internal_energy
phase = 1
execute_on = 'initial timestep_end'
[]
[]
[Kernels]
[mass]
type = PorousFlowMassTimeDerivative
variable = pliq
[]
[heat]
type = PorousFlowEnergyTimeDerivative
variable = h
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pliq h'
number_fluid_phases = 2
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureBC
pe = 1e5
lambda = 2
pc_max = 1e6
[]
[fs]
type = PorousFlowWaterVapor
water_fp = water
capillary_pressure = pc
[]
[]
[FluidProperties]
[water]
type = Water97FluidProperties
[]
[]
[Materials]
[watervapor]
type = PorousFlowFluidStateSingleComponent
porepressure = pliq
enthalpy = h
temperature_unit = Celsius
capillary_pressure = pc
fluid_state = fs
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-14 0 0 0 1e-14 0 0 0 1e-14'
[]
[relperm0]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[relperm1]
type = PorousFlowRelativePermeabilityCorey
n = 3
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.2
[]
[internal_energy]
type = PorousFlowMatrixInternalEnergy
density = 2650
specific_heat_capacity = 1000
[]
[]
[Executioner]
type = Transient
solve_type = NEWTON
end_time = 1e3
nl_abs_tol = 1e-12
[TimeStepper]
type = IterationAdaptiveDT
dt = 10
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
[]
[]
[Postprocessors]
[density_water]
type = ElementAverageValue
variable = density_water
execute_on = 'initial timestep_end'
[]
[density_gas]
type = ElementAverageValue
variable = density_gas
execute_on = 'initial timestep_end'
[]
[viscosity_water]
type = ElementAverageValue
variable = viscosity_water
execute_on = 'initial timestep_end'
[]
[viscosity_gas]
type = ElementAverageValue
variable = viscosity_gas
execute_on = 'initial timestep_end'
[]
[enthalpy_water]
type = ElementAverageValue
variable = enthalpy_water
execute_on = 'initial timestep_end'
[]
[enthalpy_gas]
type = ElementAverageValue
variable = enthalpy_gas
execute_on = 'initial timestep_end'
[]
[sg]
type = ElementAverageValue
variable = saturation_gas
execute_on = 'initial timestep_end'
[]
[sw]
type = ElementAverageValue
variable = saturation_water
execute_on = 'initial timestep_end'
[]
[pwater]
type = ElementAverageValue
variable = pressure_water
execute_on = 'initial timestep_end'
[]
[pgas]
type = ElementAverageValue
variable = pressure_gas
execute_on = 'initial timestep_end'
[]
[temperature]
type = ElementAverageValue
variable = temperature
execute_on = 'initial timestep_end'
[]
[enthalpy]
type = ElementAverageValue
variable = h
execute_on = 'initial timestep_end'
[]
[pliq]
type = ElementAverageValue
variable = pliq
execute_on = 'initial timestep_end'
[]
[liquid_mass]
type = PorousFlowFluidMass
phase = 0
execute_on = 'initial timestep_end'
[]
[vapor_mass]
type = PorousFlowFluidMass
phase = 1
execute_on = 'initial timestep_end'
[]
[liquid_heat]
type = PorousFlowHeatEnergy
phase = 0
execute_on = 'initial timestep_end'
[]
[vapor_heat]
type = PorousFlowHeatEnergy
phase = 1
execute_on = 'initial timestep_end'
[]
[e_water]
type = ElementAverageValue
variable = e_water
execute_on = 'initial timestep_end'
[]
[e_gas]
type = ElementAverageValue
variable = e_gas
execute_on = 'initial timestep_end'
[]
[]
[Outputs]
csv = true
perf_graph = false
[]
(modules/porous_flow/test/tests/dirackernels/pls01.i)
# fully-saturated situation with a poly-line sink at one
# of the nodes. Because there is no fluid flow, the
# other nodes should not experience any change in
# porepressure.
# The poly-line sink has length=2 and weight=0.1, and
# extracts fluid at a constant rate of 1 kg.m^-1.s^-1.
# Therefore, in 1 second it will have extracted a total
# of 0.2 kg.
# The porosity is 0.1, and the elemental volume is 2,
# so the fluid mass at the node in question = 0.2 * density / 4,
# where the 4 is the number of nodes in the element.
# In this simulation density = dens0 * exp(P / bulk), with
# dens0 = 100, and bulk = 20 MPa.
# The initial porepressure P0 = 10 MPa, so the final (after
# 1 second of simulation) is
# P(t=1) = 0.950879 MPa
#
[Mesh]
type = GeneratedMesh
dim = 2
nx = 1
ny = 1
xmin = 0
xmax = 2
ymin = 0
ymax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[pls_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e7
density0 = 100
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[DiracKernels]
[pls]
type = PorousFlowPolyLineSink
fluid_phase = 0
point_file = pls01_21.bh
line_length = 2
SumQuantityUO = pls_total_outflow_mass
variable = pp
p_or_t_vals = '0 1E7'
fluxes = '1 1'
[]
[]
[Postprocessors]
[pls_report]
type = PorousFlowPlotQuantity
uo = pls_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
indirect_dependencies = 'fluid_mass1 fluid_mass0 pls_report'
[]
[p00]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[p01]
type = PointValue
variable = pp
point = '0 1 0'
execute_on = timestep_end
[]
[p20]
type = PointValue
variable = pp
point = '2 0 0'
execute_on = timestep_end
[]
[p21]
type = PointValue
variable = pp
point = '2 1 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 pls_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 1
dt = 1
solve_type = NEWTON
[]
[Outputs]
file_base = pls01
exodus = false
csv = true
execute_on = timestep_end
[]
(modules/porous_flow/test/tests/dirackernels/bh_except06.i)
# PorousFlowPeacemanBorehole exception test
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = TimeDerivative
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-12 0 0 0 1E-12 0 0 0 1E-12'
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
bottom_p_or_t = 0
fluid_phase = 0
point_file = bh02.bh
use_mobility = true
SumQuantityUO = borehole_total_outflow_mass
variable = pp
unit_weight = '0 0 0'
character = 1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 0.5
dt = 1E-2
solve_type = NEWTON
[]
(modules/porous_flow/test/tests/heterogeneous_materials/constant_poroperm2.i)
# Assign porosity and permeability variables from constant AuxVariables to create
# a heterogeneous model
[Mesh]
type = GeneratedMesh
dim = 3
nx = 3
ny = 3
nz = 3
xmin = 1
xmax = 4
ymin = 1
ymax = 4
zmin = 1
zmax = 4
[]
[GlobalParams]
PorousFlowDictator = dictator
gravity = '0 0 -10'
[]
[Variables]
[ppwater]
initial_condition = 1e6
[]
[]
[AuxVariables]
[poro]
family = MONOMIAL
order = CONSTANT
[]
[permxx]
family = MONOMIAL
order = CONSTANT
[]
[permxy]
family = MONOMIAL
order = CONSTANT
[]
[permxz]
family = MONOMIAL
order = CONSTANT
[]
[permyx]
family = MONOMIAL
order = CONSTANT
[]
[permyy]
family = MONOMIAL
order = CONSTANT
[]
[permyz]
family = MONOMIAL
order = CONSTANT
[]
[permzx]
family = MONOMIAL
order = CONSTANT
[]
[permzy]
family = MONOMIAL
order = CONSTANT
[]
[permzz]
family = MONOMIAL
order = CONSTANT
[]
[poromat]
family = MONOMIAL
order = CONSTANT
[]
[permxxmat]
family = MONOMIAL
order = CONSTANT
[]
[permxymat]
family = MONOMIAL
order = CONSTANT
[]
[permxzmat]
family = MONOMIAL
order = CONSTANT
[]
[permyxmat]
family = MONOMIAL
order = CONSTANT
[]
[permyymat]
family = MONOMIAL
order = CONSTANT
[]
[permyzmat]
family = MONOMIAL
order = CONSTANT
[]
[permzxmat]
family = MONOMIAL
order = CONSTANT
[]
[permzymat]
family = MONOMIAL
order = CONSTANT
[]
[permzzmat]
family = MONOMIAL
order = CONSTANT
[]
[]
[AuxKernels]
[poromat]
type = PorousFlowPropertyAux
property = porosity
variable = poromat
[]
[permxxmat]
type = PorousFlowPropertyAux
property = permeability
variable = permxxmat
column = 0
row = 0
[]
[permxymat]
type = PorousFlowPropertyAux
property = permeability
variable = permxymat
column = 1
row = 0
[]
[permxzmat]
type = PorousFlowPropertyAux
property = permeability
variable = permxzmat
column = 2
row = 0
[]
[permyxmat]
type = PorousFlowPropertyAux
property = permeability
variable = permyxmat
column = 0
row = 1
[]
[permyymat]
type = PorousFlowPropertyAux
property = permeability
variable = permyymat
column = 1
row = 1
[]
[permyzmat]
type = PorousFlowPropertyAux
property = permeability
variable = permyzmat
column = 2
row = 1
[]
[permzxmat]
type = PorousFlowPropertyAux
property = permeability
variable = permzxmat
column = 0
row = 2
[]
[permzymat]
type = PorousFlowPropertyAux
property = permeability
variable = permzymat
column = 1
row = 2
[]
[permzzmat]
type = PorousFlowPropertyAux
property = permeability
variable = permzzmat
column = 2
row = 2
[]
[]
[ICs]
[poro]
type = RandomIC
seed = 0
variable = poro
max = 0.5
min = 0.1
[]
[permxx]
type = FunctionIC
function = permxx
variable = permxx
[]
[permxy]
type = FunctionIC
function = permxy
variable = permxy
[]
[permxz]
type = FunctionIC
function = permxz
variable = permxz
[]
[permyx]
type = FunctionIC
function = permyx
variable = permyx
[]
[permyy]
type = FunctionIC
function = permyy
variable = permyy
[]
[permyz]
type = FunctionIC
function = permyz
variable = permyz
[]
[permzx]
type = FunctionIC
function = permzx
variable = permzx
[]
[permzy]
type = FunctionIC
function = permzy
variable = permzy
[]
[permzz]
type = FunctionIC
function = permzz
variable = permzz
[]
[]
[Functions]
[permxx]
type = ParsedFunction
expression = '(x*x)*1e-11'
[]
[permxy]
type = ParsedFunction
expression = '(x*y)*1e-11'
[]
[permxz]
type = ParsedFunction
expression = '(x*z)*1e-11'
[]
[permyx]
type = ParsedFunction
expression = '(y*x)*1e-11'
[]
[permyy]
type = ParsedFunction
expression = '(y*y)*1e-11'
[]
[permyz]
type = ParsedFunction
expression = '(y*z)*1e-11'
[]
[permzx]
type = ParsedFunction
expression = '(z*x)*1e-11'
[]
[permzy]
type = ParsedFunction
expression = '(z*y)*1e-11'
[]
[permzz]
type = ParsedFunction
expression = '(z*z)*1e-11'
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
variable = ppwater
[]
[flux0]
type = PorousFlowAdvectiveFlux
variable = ppwater
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'ppwater'
number_fluid_phases = 1
number_fluid_components = 1
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
density0 = 1000
viscosity = 1e-3
thermal_expansion = 0
cv = 2
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseFullySaturated
porepressure = ppwater
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = poro
[]
[permeability]
type = PorousFlowPermeabilityConstFromVar
perm_xx = permxx
perm_xy = permxy
perm_xz = permxz
perm_yx = permyx
perm_yy = permyy
perm_yz = permyz
perm_zx = permzx
perm_zy = permzy
perm_zz = permzz
[]
[relperm_water]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[]
[Postprocessors]
[mass_ph0]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol'
petsc_options_value = 'bcgs bjacobi 1E-12 1E-10'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
end_time = 100
dt = 100
[]
[Outputs]
execute_on = 'initial timestep_end'
exodus = true
perf_graph = true
[]
(modules/porous_flow/test/tests/dirackernels/bh_except01.i)
# PorousFlowPeacemanBorehole exception test
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = TimeDerivative
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-12 0 0 0 1E-12 0 0 0 1E-12'
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
bottom_p_or_t = 0
fluid_phase = 1
point_file = bh02.bh
SumQuantityUO = borehole_total_outflow_mass
variable = pp
unit_weight = '0 0 0'
character = 1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 0.5
dt = 1E-2
solve_type = NEWTON
[]
(modules/porous_flow/test/tests/dirackernels/bh_except03.i)
# PorousFlowPeacemanBorehole exception test
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = TimeDerivative
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
at_nodes = true # Needed to force expected error
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-12 0 0 0 1E-12 0 0 0 1E-12'
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
bottom_p_or_t = 0
fluid_phase = 0
point_file = bh02.bh
SumQuantityUO = borehole_total_outflow_mass
variable = pp
unit_weight = '0 0 0'
character = 1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 0.5
dt = 1E-2
solve_type = NEWTON
[]
(modules/porous_flow/test/tests/fluidstate/brineco2_2.i)
# Injection of supercritical CO2 into a single brine saturated cell. The CO2 initially fully
# dissolves into the brine, increasing its density slightly. After a few time steps,
# the brine is saturated with CO2, and subsequently a supercritical gas phase of CO2 saturated
# with a small amount of H2O is formed. Salt is included as a nonlinear variable.
[Mesh]
type = GeneratedMesh
dim = 2
[]
[GlobalParams]
PorousFlowDictator = dictator
temperature = 30
[]
[Variables]
[pgas]
initial_condition = 20e6
[]
[z]
[]
[xnacl]
initial_condition = 0.1
[]
[]
[DiracKernels]
[source]
type = PorousFlowSquarePulsePointSource
variable = z
point = '0.5 0.5 0'
mass_flux = 2
[]
[]
[BCs]
[left]
type = DirichletBC
value = 20e6
variable = pgas
boundary = left
[]
[right]
type = DirichletBC
value = 20e6
variable = pgas
boundary = right
[]
[]
[AuxVariables]
[pressure_gas]
order = CONSTANT
family = MONOMIAL
[]
[pressure_water]
order = CONSTANT
family = MONOMIAL
[]
[saturation_gas]
order = CONSTANT
family = MONOMIAL
[]
[saturation_water]
order = CONSTANT
family = MONOMIAL
[]
[density_water]
order = CONSTANT
family = MONOMIAL
[]
[density_gas]
order = CONSTANT
family = MONOMIAL
[]
[viscosity_water]
order = CONSTANT
family = MONOMIAL
[]
[viscosity_gas]
order = CONSTANT
family = MONOMIAL
[]
[x0_water]
order = CONSTANT
family = MONOMIAL
[]
[x0_gas]
order = CONSTANT
family = MONOMIAL
[]
[x1_water]
order = CONSTANT
family = MONOMIAL
[]
[x1_gas]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[pressure_water]
type = PorousFlowPropertyAux
variable = pressure_water
property = pressure
phase = 0
execute_on = 'initial timestep_end'
[]
[pressure_gas]
type = PorousFlowPropertyAux
variable = pressure_gas
property = pressure
phase = 1
execute_on = 'initial timestep_end'
[]
[saturation_water]
type = PorousFlowPropertyAux
variable = saturation_water
property = saturation
phase = 0
execute_on = 'initial timestep_end'
[]
[saturation_gas]
type = PorousFlowPropertyAux
variable = saturation_gas
property = saturation
phase = 1
execute_on = 'initial timestep_end'
[]
[density_water]
type = PorousFlowPropertyAux
variable = density_water
property = density
phase = 0
execute_on = 'initial timestep_end'
[]
[density_gas]
type = PorousFlowPropertyAux
variable = density_gas
property = density
phase = 1
execute_on = 'initial timestep_end'
[]
[viscosity_water]
type = PorousFlowPropertyAux
variable = viscosity_water
property = viscosity
phase = 0
execute_on = 'initial timestep_end'
[]
[viscosity_gas]
type = PorousFlowPropertyAux
variable = viscosity_gas
property = viscosity
phase = 1
execute_on = 'initial timestep_end'
[]
[x1_water]
type = PorousFlowPropertyAux
variable = x1_water
property = mass_fraction
phase = 0
fluid_component = 1
execute_on = 'initial timestep_end'
[]
[x1_gas]
type = PorousFlowPropertyAux
variable = x1_gas
property = mass_fraction
phase = 1
fluid_component = 1
execute_on = 'initial timestep_end'
[]
[x0_water]
type = PorousFlowPropertyAux
variable = x0_water
property = mass_fraction
phase = 0
fluid_component = 0
execute_on = 'initial timestep_end'
[]
[x0_gas]
type = PorousFlowPropertyAux
variable = x0_gas
property = mass_fraction
phase = 1
fluid_component = 0
execute_on = 'initial timestep_end'
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
variable = pgas
fluid_component = 0
[]
[mass1]
type = PorousFlowMassTimeDerivative
variable = z
fluid_component = 1
[]
[mass2]
type = PorousFlowMassTimeDerivative
variable = xnacl
fluid_component = 2
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pgas z xnacl'
number_fluid_phases = 2
number_fluid_components = 3
[]
[pc]
type = PorousFlowCapillaryPressureConst
pc = 0
[]
[fs]
type = PorousFlowBrineCO2
brine_fp = brine
co2_fp = co2
capillary_pressure = pc
[]
[]
[FluidProperties]
[co2]
type = CO2FluidProperties
[]
[brine]
type = BrineFluidProperties
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[brineco2]
type = PorousFlowFluidState
gas_porepressure = pgas
z = z
temperature_unit = Celsius
xnacl = xnacl
capillary_pressure = pc
fluid_state = fs
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-12 0 0 0 1e-12 0 0 0 1e-12'
[]
[relperm0]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[relperm1]
type = PorousFlowRelativePermeabilityCorey
n = 3
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[Executioner]
type = Transient
solve_type = NEWTON
dt = 1
end_time = 10
[]
[Preconditioning]
[smp]
type = SMP
full = true
[]
[]
[Postprocessors]
[density_water]
type = ElementIntegralVariablePostprocessor
variable = density_water
execute_on = 'initial timestep_end'
[]
[density_gas]
type = ElementIntegralVariablePostprocessor
variable = density_gas
execute_on = 'initial timestep_end'
[]
[viscosity_water]
type = ElementIntegralVariablePostprocessor
variable = viscosity_water
execute_on = 'initial timestep_end'
[]
[viscosity_gas]
type = ElementIntegralVariablePostprocessor
variable = viscosity_gas
execute_on = 'initial timestep_end'
[]
[x1_water]
type = ElementIntegralVariablePostprocessor
variable = x1_water
execute_on = 'initial timestep_end'
[]
[x0_water]
type = ElementIntegralVariablePostprocessor
variable = x0_water
execute_on = 'initial timestep_end'
[]
[x1_gas]
type = ElementIntegralVariablePostprocessor
variable = x1_gas
execute_on = 'initial timestep_end'
[]
[x0_gas]
type = ElementIntegralVariablePostprocessor
variable = x0_gas
execute_on = 'initial timestep_end'
[]
[sg]
type = ElementIntegralVariablePostprocessor
variable = saturation_gas
execute_on = 'initial timestep_end'
[]
[sw]
type = ElementIntegralVariablePostprocessor
variable = saturation_water
execute_on = 'initial timestep_end'
[]
[pwater]
type = ElementIntegralVariablePostprocessor
variable = pressure_water
execute_on = 'initial timestep_end'
[]
[pgas]
type = ElementIntegralVariablePostprocessor
variable = pressure_gas
execute_on = 'initial timestep_end'
[]
[xnacl]
type = ElementIntegralVariablePostprocessor
variable = xnacl
execute_on = 'initial timestep_end'
[]
[x0mass]
type = PorousFlowFluidMass
fluid_component = 0
phase = '0 1'
execute_on = 'initial timestep_end'
[]
[x1mass]
type = PorousFlowFluidMass
fluid_component = 1
phase = '0 1'
execute_on = 'initial timestep_end'
[]
[x2mass]
type = PorousFlowFluidMass
fluid_component = 2
phase = '0 1'
execute_on = 'initial timestep_end'
[]
[]
[Outputs]
csv = true
file_base = brineco2_2
execute_on = 'initial timestep_end'
perf_graph = true
[]
(modules/porous_flow/test/tests/dirackernels/hfrompps.i)
[Mesh]
type = GeneratedMesh
dim = 2
nx = 3
ny = 3
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pressure]
[]
[temperature]
scaling = 1E-6
[]
[]
[ICs]
[pressure_ic]
type = ConstantIC
variable = pressure
value = 1e6
[]
[temperature_ic]
type = ConstantIC
variable = temperature
value = 400
[]
[]
[Kernels]
[P_time_deriv]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pressure
[]
[P_flux]
type = PorousFlowAdvectiveFlux
fluid_component = 0
variable = pressure
gravity = '0 -9.8 0'
[]
[energy_dot]
type = PorousFlowEnergyTimeDerivative
variable = temperature
[]
[heat_conduction]
type = PorousFlowHeatConduction
variable = temperature
[]
[heat_advection]
type = PorousFlowHeatAdvection
variable = temperature
gravity = '0 -9.8 0'
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pressure temperature'
number_fluid_phases = 1
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureConst
[]
[]
[Functions]
[mass_flux_in_fn]
type = PiecewiseConstant
direction = left
xy_data = '
0 0
100 0.1
300 0
600 0.1
1400 0
1500 0.2'
[]
[T_in_fn]
type = PiecewiseLinear
xy_data = '
0 400
600 450'
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
temperature = temperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pressure
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
at_nodes = true
[]
[fluid_props]
type = PorousFlowSingleComponentFluid
phase = 0
fp = simple_fluid
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 1
phase = 0
[]
[fp_mat]
type = FluidPropertiesMaterialPT
pressure = pressure
temperature = temperature
fp = simple_fluid
[]
[rock_heat]
type = PorousFlowMatrixInternalEnergy
specific_heat_capacity = 830.0
density = 2750
[]
[thermal_conductivity]
type = PorousFlowThermalConductivityIdeal
dry_thermal_conductivity = '2.5 0 0 0 2.5 0 0 0 2.5'
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1.0E-15 0 0 0 1.0E-15 0 0 0 1.0E-14'
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[DiracKernels]
[source]
type = PorousFlowPointSourceFromPostprocessor
variable = pressure
mass_flux = mass_flux_in
point = '0.5 0.5 0'
[]
[source_h]
type = PorousFlowPointEnthalpySourceFromPostprocessor
variable = temperature
mass_flux = mass_flux_in
point = '0.5 0.5 0'
T_in = T_in
pressure = pressure
fp = simple_fluid
[]
[]
[Preconditioning]
[preferred]
type = SMP
full = true
petsc_options_iname = '-pc_type'
petsc_options_value = ' lu '
[]
[]
[Postprocessors]
[total_mass]
type = PorousFlowFluidMass
execute_on = 'initial timestep_end'
[]
[total_heat]
type = PorousFlowHeatEnergy
[]
[mass_flux_in]
type = FunctionValuePostprocessor
function = mass_flux_in_fn
execute_on = 'initial timestep_end'
[]
[avg_temp]
type = ElementAverageValue
variable = temperature
execute_on = 'initial timestep_end'
[]
[T_in]
type = FunctionValuePostprocessor
function = T_in_fn
execute_on = 'initial timestep_end'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
nl_abs_tol = 1e-14
dt = 100
end_time = 2000
[]
[Outputs]
csv = true
execute_on = 'initial timestep_end'
file_base = hfrompps
[]
(modules/porous_flow/test/tests/fluidstate/waterncg_nonisothermal.i)
[Mesh]
[mesh]
type = GeneratedMeshGenerator
dim = 2
[]
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pgas]
initial_condition = 1e6
[]
[z]
initial_condition = 0.25
[]
[temperature]
initial_condition = 70
[]
[]
[AuxVariables]
[pressure_gas]
order = CONSTANT
family = MONOMIAL
[]
[pressure_water]
order = CONSTANT
family = MONOMIAL
[]
[saturation_gas]
order = CONSTANT
family = MONOMIAL
[]
[saturation_water]
order = CONSTANT
family = MONOMIAL
[]
[density_water]
order = CONSTANT
family = MONOMIAL
[]
[density_gas]
order = CONSTANT
family = MONOMIAL
[]
[viscosity_water]
order = CONSTANT
family = MONOMIAL
[]
[viscosity_gas]
order = CONSTANT
family = MONOMIAL
[]
[enthalpy_water]
order = CONSTANT
family = MONOMIAL
[]
[enthalpy_gas]
order = CONSTANT
family = MONOMIAL
[]
[internal_energy_water]
order = CONSTANT
family = MONOMIAL
[]
[internal_energy_gas]
order = CONSTANT
family = MONOMIAL
[]
[x0_water]
order = CONSTANT
family = MONOMIAL
[]
[x0_gas]
order = CONSTANT
family = MONOMIAL
[]
[x1_water]
order = CONSTANT
family = MONOMIAL
[]
[x1_gas]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[pressure_water]
type = PorousFlowPropertyAux
variable = pressure_water
property = pressure
phase = 0
execute_on = timestep_end
[]
[pressure_gas]
type = PorousFlowPropertyAux
variable = pressure_gas
property = pressure
phase = 1
execute_on = timestep_end
[]
[saturation_water]
type = PorousFlowPropertyAux
variable = saturation_water
property = saturation
phase = 0
execute_on = timestep_end
[]
[saturation_gas]
type = PorousFlowPropertyAux
variable = saturation_gas
property = saturation
phase = 1
execute_on = timestep_end
[]
[density_water]
type = PorousFlowPropertyAux
variable = density_water
property = density
phase = 0
execute_on = timestep_end
[]
[density_gas]
type = PorousFlowPropertyAux
variable = density_gas
property = density
phase = 1
execute_on = timestep_end
[]
[viscosity_water]
type = PorousFlowPropertyAux
variable = viscosity_water
property = viscosity
phase = 0
execute_on = timestep_end
[]
[viscosity_gas]
type = PorousFlowPropertyAux
variable = viscosity_gas
property = viscosity
phase = 1
execute_on = timestep_end
[]
[enthalpy_water]
type = PorousFlowPropertyAux
variable = enthalpy_water
property = enthalpy
phase = 0
execute_on = timestep_end
[]
[enthalpy_gas]
type = PorousFlowPropertyAux
variable = enthalpy_gas
property = enthalpy
phase = 1
execute_on = timestep_end
[]
[internal_energy_water]
type = PorousFlowPropertyAux
variable = internal_energy_water
property = internal_energy
phase = 0
execute_on = timestep_end
[]
[internal_energy_gas]
type = PorousFlowPropertyAux
variable = internal_energy_gas
property = internal_energy
phase = 1
execute_on = timestep_end
[]
[x1_water]
type = PorousFlowPropertyAux
variable = x1_water
property = mass_fraction
phase = 0
fluid_component = 1
execute_on = timestep_end
[]
[x1_gas]
type = PorousFlowPropertyAux
variable = x1_gas
property = mass_fraction
phase = 1
fluid_component = 1
execute_on = timestep_end
[]
[x0_water]
type = PorousFlowPropertyAux
variable = x0_water
property = mass_fraction
phase = 0
fluid_component = 0
execute_on = timestep_end
[]
[x0_gas]
type = PorousFlowPropertyAux
variable = x0_gas
property = mass_fraction
phase = 1
fluid_component = 0
execute_on = timestep_end
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
variable = pgas
fluid_component = 0
[]
[mass1]
type = PorousFlowMassTimeDerivative
variable = z
fluid_component = 1
[]
[heat]
type = TimeDerivative
variable = temperature
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pgas z '
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureConst
pc = 0
[]
[fs]
type = PorousFlowWaterNCG
water_fp = water
gas_fp = co2
capillary_pressure = pc
[]
[]
[FluidProperties]
[co2]
type = CO2FluidProperties
[]
[water]
type = Water97FluidProperties
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
temperature = temperature
[]
[waterncg]
type = PorousFlowFluidState
gas_porepressure = pgas
z = z
temperature = temperature
temperature_unit = Celsius
capillary_pressure = pc
fluid_state = fs
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-12 0 0 0 1e-12 0 0 0 1e-12'
[]
[relperm0]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[relperm1]
type = PorousFlowRelativePermeabilityCorey
n = 3
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[Executioner]
type = Transient
solve_type = NEWTON
dt = 1
end_time = 1
nl_abs_tol = 1e-12
[]
[Preconditioning]
[smp]
type = SMP
full = true
[]
[]
[Postprocessors]
[density_water]
type = ElementIntegralVariablePostprocessor
variable = density_water
[]
[density_gas]
type = ElementIntegralVariablePostprocessor
variable = density_gas
[]
[viscosity_water]
type = ElementIntegralVariablePostprocessor
variable = viscosity_water
[]
[viscosity_gas]
type = ElementIntegralVariablePostprocessor
variable = viscosity_gas
[]
[enthalpy_water]
type = ElementIntegralVariablePostprocessor
variable = enthalpy_water
[]
[enthalpy_gas]
type = ElementIntegralVariablePostprocessor
variable = enthalpy_gas
[]
[internal_energy_water]
type = ElementIntegralVariablePostprocessor
variable = internal_energy_water
[]
[internal_energy_gas]
type = ElementIntegralVariablePostprocessor
variable = internal_energy_gas
[]
[x0_water]
type = ElementIntegralVariablePostprocessor
variable = x0_water
[]
[x1_gas]
type = ElementIntegralVariablePostprocessor
variable = x1_gas
[]
[x0_gas]
type = ElementIntegralVariablePostprocessor
variable = x0_gas
[]
[sg]
type = ElementIntegralVariablePostprocessor
variable = saturation_gas
[]
[sw]
type = ElementIntegralVariablePostprocessor
variable = saturation_water
[]
[pwater]
type = ElementIntegralVariablePostprocessor
variable = pressure_water
[]
[pgas]
type = ElementIntegralVariablePostprocessor
variable = pressure_gas
[]
[x0mass]
type = PorousFlowFluidMass
fluid_component = 0
phase = '0 1'
[]
[x1mass]
type = PorousFlowFluidMass
fluid_component = 1
phase = '0 1'
[]
[]
[Outputs]
csv = true
execute_on = timestep_end
[]
(modules/porous_flow/test/tests/dirackernels/theis3.i)
# Two phase Theis problem: Flow from single source
# Constant rate injection 0.5 kg/s
# 1D cylindrical mesh
[Mesh]
type = GeneratedMesh
dim = 1
nx = 100
xmax = 2000
bias_x = 1.05
coord_type = RZ
rz_coord_axis = Y
[]
[GlobalParams]
PorousFlowDictator = dictator
gravity = '0 0 0'
[]
[Variables]
[ppwater]
initial_condition = 20e6
[]
[sgas]
initial_condition = 0
[]
[]
[AuxVariables]
[massfrac_ph0_sp0]
initial_condition = 1
[]
[massfrac_ph1_sp0]
initial_condition = 0
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = ppwater
[]
[flux0]
type = PorousFlowAdvectiveFlux
fluid_component = 0
variable = ppwater
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = sgas
[]
[flux1]
type = PorousFlowAdvectiveFlux
fluid_component = 1
variable = sgas
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'ppwater sgas'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureConst
pc = 1e5
[]
[]
[FluidProperties]
[simple_fluid0]
type = SimpleFluidProperties
bulk_modulus = 2e9
density0 = 1000
viscosity = 1e-3
thermal_expansion = 0
[]
[simple_fluid1]
type = SimpleFluidProperties
bulk_modulus = 2e9
density0 = 10
viscosity = 1e-4
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow2PhasePS
phase0_porepressure = ppwater
phase1_saturation = sgas
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
mass_fraction_vars = 'massfrac_ph0_sp0 massfrac_ph1_sp0'
[]
[simple_fluid0]
type = PorousFlowSingleComponentFluid
fp = simple_fluid0
phase = 0
compute_enthalpy = false
compute_internal_energy = false
[]
[simple_fluid1]
type = PorousFlowSingleComponentFluid
fp = simple_fluid1
phase = 1
compute_enthalpy = false
compute_internal_energy = false
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.2
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-12 0 0 0 1e-12 0 0 0 1e-12'
[]
[relperm_water]
type = PorousFlowRelativePermeabilityCorey
n = 1
phase = 0
[]
[relperm_gas]
type = PorousFlowRelativePermeabilityCorey
n = 1
phase = 1
[]
[]
[BCs]
[rightwater]
type = DirichletBC
boundary = right
value = 20e6
variable = ppwater
[]
[]
[DiracKernels]
[source]
type = PorousFlowSquarePulsePointSource
point = '0 0 0'
mass_flux = 0.5
variable = sgas
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
petsc_options = '-snes_converged_reason -ksp_diagonal_scale -ksp_diagonal_scale_fix -ksp_gmres_modifiedgramschmidt -snes_linesearch_monitor'
petsc_options_iname = '-ksp_type -pc_type -sub_pc_type -sub_pc_factor_shift_type -pc_asm_overlap -snes_atol -snes_rtol -snes_max_it'
petsc_options_value = 'gmres asm lu NONZERO 2 1E-8 1E-10 20'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
end_time = 1e4
[TimeStepper]
type = IterationAdaptiveDT
dt = 10
growth_factor = 2
[]
[]
[VectorPostprocessors]
[line]
type = NodalValueSampler
sort_by = x
variable = 'ppwater sgas'
execute_on = 'timestep_end'
[]
[]
[Postprocessors]
[ppwater]
type = PointValue
point = '4 0 0'
variable = ppwater
[]
[sgas]
type = PointValue
point = '4 0 0'
variable = sgas
[]
[massgas]
type = PorousFlowFluidMass
fluid_component = 1
[]
[]
[Outputs]
file_base = theis3
print_linear_residuals = false
perf_graph = true
[csv]
type = CSV
execute_on = timestep_end
execute_vector_postprocessors_on = final
[]
[]
(modules/porous_flow/test/tests/dirackernels/bh_except15.i)
# fully-saturated
# production
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
bottom_p_or_t = 0
fluid_phase = 0
point_file = bh02.bh
SumQuantityUO = borehole_total_outflow_mass
variable = pp
unit_weight = '0 0 0'
character = 1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 0.5
dt = 1E-2
solve_type = NEWTON
[]
(modules/porous_flow/test/tests/mass_conservation/mass05.i)
# Checking that the mass postprocessor correctly calculates the mass
# of each component in each phase, as well as the total mass of each
# component in all phases.
# 2phase, 2component, constant porosity
[Mesh]
type = GeneratedMesh
dim = 1
nx = 2
xmin = 0
xmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
[]
[sat]
[]
[]
[AuxVariables]
[massfrac_ph0_sp0]
initial_condition = 0.3
[]
[massfrac_ph1_sp0]
initial_condition = 0.55
[]
[]
[ICs]
[pinit]
type = ConstantIC
value = 1
variable = pp
[]
[satinit]
type = FunctionIC
function = 1-x
variable = sat
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = sat
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp sat'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureConst
pc = 0
[]
[]
[FluidProperties]
[simple_fluid0]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 1
thermal_expansion = 0
[]
[simple_fluid1]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 0.1
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow2PhasePS
phase0_porepressure = pp
phase1_saturation = sat
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
mass_fraction_vars = 'massfrac_ph0_sp0 massfrac_ph1_sp0'
[]
[simple_fluid0]
type = PorousFlowSingleComponentFluid
fp = simple_fluid0
phase = 0
[]
[simple_fluid1]
type = PorousFlowSingleComponentFluid
fp = simple_fluid1
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[Postprocessors]
[comp0_phase0_mass]
type = PorousFlowFluidMass
fluid_component = 0
phase = 0
[]
[comp0_phase1_mass]
type = PorousFlowFluidMass
fluid_component = 0
phase = 1
[]
[comp0_total_mass]
type = PorousFlowFluidMass
fluid_component = 0
[]
[comp0_total_mass2]
type = PorousFlowFluidMass
fluid_component = 0
phase = '0 1'
[]
[comp1_phase0_mass]
type = PorousFlowFluidMass
fluid_component = 1
phase = 0
[]
[comp1_phase1_mass]
type = PorousFlowFluidMass
fluid_component = 1
phase = 1
[]
[comp1_total_mass]
type = PorousFlowFluidMass
fluid_component = 1
[]
[comp1_total_mass2]
type = PorousFlowFluidMass
fluid_component = 1
phase = '0 1'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
nl_abs_tol = 1e-16
dt = 1
end_time = 1
[]
[Outputs]
execute_on = 'timestep_end'
file_base = mass05
csv = true
[]
(modules/porous_flow/test/tests/fluidstate/brineco2_nonisothermal.i)
[Mesh]
[mesh]
type = GeneratedMeshGenerator
dim = 2
[]
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pgas]
initial_condition = 20e6
[]
[z]
initial_condition = 0.2
[]
[temperature]
initial_condition = 70
[]
[]
[AuxVariables]
[xnacl]
initial_condition = 0.1
[]
[pressure_gas]
order = CONSTANT
family = MONOMIAL
[]
[pressure_water]
order = CONSTANT
family = MONOMIAL
[]
[saturation_gas]
order = CONSTANT
family = MONOMIAL
[]
[saturation_water]
order = CONSTANT
family = MONOMIAL
[]
[density_water]
order = CONSTANT
family = MONOMIAL
[]
[density_gas]
order = CONSTANT
family = MONOMIAL
[]
[viscosity_water]
order = CONSTANT
family = MONOMIAL
[]
[viscosity_gas]
order = CONSTANT
family = MONOMIAL
[]
[enthalpy_water]
order = CONSTANT
family = MONOMIAL
[]
[enthalpy_gas]
order = CONSTANT
family = MONOMIAL
[]
[internal_energy_water]
order = CONSTANT
family = MONOMIAL
[]
[internal_energy_gas]
order = CONSTANT
family = MONOMIAL
[]
[x0_water]
order = CONSTANT
family = MONOMIAL
[]
[x0_gas]
order = CONSTANT
family = MONOMIAL
[]
[x1_water]
order = CONSTANT
family = MONOMIAL
[]
[x1_gas]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[pressure_water]
type = PorousFlowPropertyAux
variable = pressure_water
property = pressure
phase = 0
execute_on = timestep_end
[]
[pressure_gas]
type = PorousFlowPropertyAux
variable = pressure_gas
property = pressure
phase = 1
execute_on = timestep_end
[]
[saturation_water]
type = PorousFlowPropertyAux
variable = saturation_water
property = saturation
phase = 0
execute_on = timestep_end
[]
[saturation_gas]
type = PorousFlowPropertyAux
variable = saturation_gas
property = saturation
phase = 1
execute_on = timestep_end
[]
[density_water]
type = PorousFlowPropertyAux
variable = density_water
property = density
phase = 0
execute_on = timestep_end
[]
[density_gas]
type = PorousFlowPropertyAux
variable = density_gas
property = density
phase = 1
execute_on = timestep_end
[]
[viscosity_water]
type = PorousFlowPropertyAux
variable = viscosity_water
property = viscosity
phase = 0
execute_on = timestep_end
[]
[viscosity_gas]
type = PorousFlowPropertyAux
variable = viscosity_gas
property = viscosity
phase = 1
execute_on = timestep_end
[]
[enthalpy_water]
type = PorousFlowPropertyAux
variable = enthalpy_water
property = enthalpy
phase = 0
execute_on = timestep_end
[]
[enthalpy_gas]
type = PorousFlowPropertyAux
variable = enthalpy_gas
property = enthalpy
phase = 1
execute_on = timestep_end
[]
[internal_energy_water]
type = PorousFlowPropertyAux
variable = internal_energy_water
property = internal_energy
phase = 0
execute_on = timestep_end
[]
[internal_energy_gas]
type = PorousFlowPropertyAux
variable = internal_energy_gas
property = internal_energy
phase = 1
execute_on = timestep_end
[]
[x1_water]
type = PorousFlowPropertyAux
variable = x1_water
property = mass_fraction
phase = 0
fluid_component = 1
execute_on = timestep_end
[]
[x1_gas]
type = PorousFlowPropertyAux
variable = x1_gas
property = mass_fraction
phase = 1
fluid_component = 1
execute_on = timestep_end
[]
[x0_water]
type = PorousFlowPropertyAux
variable = x0_water
property = mass_fraction
phase = 0
fluid_component = 0
execute_on = timestep_end
[]
[x0_gas]
type = PorousFlowPropertyAux
variable = x0_gas
property = mass_fraction
phase = 1
fluid_component = 0
execute_on = timestep_end
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
variable = pgas
fluid_component = 0
[]
[mass1]
type = PorousFlowMassTimeDerivative
variable = z
fluid_component = 1
[]
[heat]
type = TimeDerivative
variable = temperature
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pgas z temperature'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureConst
pc = 0
[]
[fs]
type = PorousFlowBrineCO2
brine_fp = brine
co2_fp = co2
capillary_pressure = pc
[]
[]
[FluidProperties]
[co2]
type = CO2FluidProperties
[]
[brine]
type = BrineFluidProperties
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[brineco2]
type = PorousFlowFluidState
gas_porepressure = pgas
z = z
temperature = temperature
temperature_unit = Celsius
xnacl = xnacl
capillary_pressure = pc
fluid_state = fs
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-12 0 0 0 1e-12 0 0 0 1e-12'
[]
[relperm0]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[relperm1]
type = PorousFlowRelativePermeabilityCorey
n = 3
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[Executioner]
type = Transient
solve_type = NEWTON
dt = 1
end_time = 1
nl_abs_tol = 1e-12
[]
[Preconditioning]
[smp]
type = SMP
full = true
[]
[]
[Postprocessors]
[density_water]
type = ElementIntegralVariablePostprocessor
variable = density_water
[]
[density_gas]
type = ElementIntegralVariablePostprocessor
variable = density_gas
[]
[viscosity_water]
type = ElementIntegralVariablePostprocessor
variable = viscosity_water
[]
[viscosity_gas]
type = ElementIntegralVariablePostprocessor
variable = viscosity_gas
[]
[enthalpy_water]
type = ElementIntegralVariablePostprocessor
variable = enthalpy_water
[]
[enthalpy_gas]
type = ElementIntegralVariablePostprocessor
variable = enthalpy_gas
[]
[internal_energy_water]
type = ElementIntegralVariablePostprocessor
variable = internal_energy_water
[]
[internal_energy_gas]
type = ElementIntegralVariablePostprocessor
variable = internal_energy_gas
[]
[x1_water]
type = ElementIntegralVariablePostprocessor
variable = x1_water
[]
[x0_water]
type = ElementIntegralVariablePostprocessor
variable = x0_water
[]
[x1_gas]
type = ElementIntegralVariablePostprocessor
variable = x1_gas
[]
[x0_gas]
type = ElementIntegralVariablePostprocessor
variable = x0_gas
[]
[sg]
type = ElementIntegralVariablePostprocessor
variable = saturation_gas
[]
[sw]
type = ElementIntegralVariablePostprocessor
variable = saturation_water
[]
[pwater]
type = ElementIntegralVariablePostprocessor
variable = pressure_water
[]
[pgas]
type = ElementIntegralVariablePostprocessor
variable = pressure_gas
[]
[x0mass]
type = PorousFlowFluidMass
fluid_component = 0
phase = '0 1'
[]
[x1mass]
type = PorousFlowFluidMass
fluid_component = 1
phase = '0 1'
[]
[]
[Outputs]
csv = true
execute_on = timestep_end
[]
(modules/porous_flow/test/tests/fluidstate/brineco2.i)
# Tests correct calculation of properties in PorousFlowBrineCO2
[Mesh]
[mesh]
type = GeneratedMeshGenerator
dim = 2
[]
[]
[GlobalParams]
PorousFlowDictator = dictator
temperature = 30
[]
[Variables]
[pgas]
initial_condition = 20e6
[]
[z]
initial_condition = 0.2
[]
[]
[AuxVariables]
[xnacl]
initial_condition = 0.1
[]
[pressure_gas]
order = CONSTANT
family = MONOMIAL
[]
[pressure_water]
order = CONSTANT
family = MONOMIAL
[]
[saturation_gas]
order = CONSTANT
family = MONOMIAL
[]
[saturation_water]
order = CONSTANT
family = MONOMIAL
[]
[density_water]
order = CONSTANT
family = MONOMIAL
[]
[density_gas]
order = CONSTANT
family = MONOMIAL
[]
[viscosity_water]
order = CONSTANT
family = MONOMIAL
[]
[viscosity_gas]
order = CONSTANT
family = MONOMIAL
[]
[enthalpy_water]
order = CONSTANT
family = MONOMIAL
[]
[enthalpy_gas]
order = CONSTANT
family = MONOMIAL
[]
[internal_energy_water]
order = CONSTANT
family = MONOMIAL
[]
[internal_energy_gas]
order = CONSTANT
family = MONOMIAL
[]
[x0_water]
order = CONSTANT
family = MONOMIAL
[]
[x0_gas]
order = CONSTANT
family = MONOMIAL
[]
[x1_water]
order = CONSTANT
family = MONOMIAL
[]
[x1_gas]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[pressure_water]
type = PorousFlowPropertyAux
variable = pressure_water
property = pressure
phase = 0
execute_on = timestep_end
[]
[pressure_gas]
type = PorousFlowPropertyAux
variable = pressure_gas
property = pressure
phase = 1
execute_on = timestep_end
[]
[saturation_water]
type = PorousFlowPropertyAux
variable = saturation_water
property = saturation
phase = 0
execute_on = timestep_end
[]
[saturation_gas]
type = PorousFlowPropertyAux
variable = saturation_gas
property = saturation
phase = 1
execute_on = timestep_end
[]
[density_water]
type = PorousFlowPropertyAux
variable = density_water
property = density
phase = 0
execute_on = timestep_end
[]
[density_gas]
type = PorousFlowPropertyAux
variable = density_gas
property = density
phase = 1
execute_on = timestep_end
[]
[viscosity_water]
type = PorousFlowPropertyAux
variable = viscosity_water
property = viscosity
phase = 0
execute_on = timestep_end
[]
[viscosity_gas]
type = PorousFlowPropertyAux
variable = viscosity_gas
property = viscosity
phase = 1
execute_on = timestep_end
[]
[enthalpy_water]
type = PorousFlowPropertyAux
variable = enthalpy_water
property = enthalpy
phase = 0
execute_on = timestep_end
[]
[enthalpy_gas]
type = PorousFlowPropertyAux
variable = enthalpy_gas
property = enthalpy
phase = 1
execute_on = timestep_end
[]
[internal_energy_water]
type = PorousFlowPropertyAux
variable = internal_energy_water
property = internal_energy
phase = 0
execute_on = timestep_end
[]
[internal_energy_gas]
type = PorousFlowPropertyAux
variable = internal_energy_gas
property = internal_energy
phase = 1
execute_on = timestep_end
[]
[x1_water]
type = PorousFlowPropertyAux
variable = x1_water
property = mass_fraction
phase = 0
fluid_component = 1
execute_on = timestep_end
[]
[x1_gas]
type = PorousFlowPropertyAux
variable = x1_gas
property = mass_fraction
phase = 1
fluid_component = 1
execute_on = timestep_end
[]
[x0_water]
type = PorousFlowPropertyAux
variable = x0_water
property = mass_fraction
phase = 0
fluid_component = 0
execute_on = timestep_end
[]
[x0_gas]
type = PorousFlowPropertyAux
variable = x0_gas
property = mass_fraction
phase = 1
fluid_component = 0
execute_on = timestep_end
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
variable = pgas
fluid_component = 0
[]
[mass1]
type = PorousFlowMassTimeDerivative
variable = z
fluid_component = 1
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pgas z'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureConst
pc = 0
[]
[fs]
type = PorousFlowBrineCO2
brine_fp = brine
co2_fp = co2
capillary_pressure = pc
[]
[]
[FluidProperties]
[co2]
type = CO2FluidProperties
[]
[brine]
type = BrineFluidProperties
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[brineco2]
type = PorousFlowFluidState
gas_porepressure = pgas
z = z
temperature_unit = Celsius
xnacl = xnacl
capillary_pressure = pc
fluid_state = fs
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-12 0 0 0 1e-12 0 0 0 1e-12'
[]
[relperm0]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[relperm1]
type = PorousFlowRelativePermeabilityCorey
n = 3
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[Executioner]
type = Transient
solve_type = NEWTON
dt = 1
end_time = 1
nl_abs_tol = 1e-12
[]
[Preconditioning]
[smp]
type = SMP
full = true
[]
[]
[Postprocessors]
[density_water]
type = ElementIntegralVariablePostprocessor
variable = density_water
[]
[density_gas]
type = ElementIntegralVariablePostprocessor
variable = density_gas
[]
[viscosity_water]
type = ElementIntegralVariablePostprocessor
variable = viscosity_water
[]
[viscosity_gas]
type = ElementIntegralVariablePostprocessor
variable = viscosity_gas
[]
[enthalpy_water]
type = ElementIntegralVariablePostprocessor
variable = enthalpy_water
[]
[enthalpy_gas]
type = ElementIntegralVariablePostprocessor
variable = enthalpy_gas
[]
[internal_energy_water]
type = ElementIntegralVariablePostprocessor
variable = internal_energy_water
[]
[internal_energy_gas]
type = ElementIntegralVariablePostprocessor
variable = internal_energy_gas
[]
[x1_water]
type = ElementIntegralVariablePostprocessor
variable = x1_water
[]
[x0_water]
type = ElementIntegralVariablePostprocessor
variable = x0_water
[]
[x1_gas]
type = ElementIntegralVariablePostprocessor
variable = x1_gas
[]
[x0_gas]
type = ElementIntegralVariablePostprocessor
variable = x0_gas
[]
[sg]
type = ElementIntegralVariablePostprocessor
variable = saturation_gas
[]
[sw]
type = ElementIntegralVariablePostprocessor
variable = saturation_water
[]
[pwater]
type = ElementIntegralVariablePostprocessor
variable = pressure_water
[]
[pgas]
type = ElementIntegralVariablePostprocessor
variable = pressure_gas
[]
[x0mass]
type = PorousFlowFluidMass
fluid_component = 0
phase = '0 1'
[]
[x1mass]
type = PorousFlowFluidMass
fluid_component = 1
phase = '0 1'
[]
[]
[Outputs]
csv = true
file_base = brineco2
execute_on = 'TIMESTEP_END'
perf_graph = false
[]
(modules/porous_flow/test/tests/energy_conservation/heat03.i)
# The sample is a single unit element, with roller BCs on the sides
# and bottom. A constant displacement is applied to the top: disp_z = -0.01*t.
# There is no fluid flow or heat flow.
# Heat energy conservation is checked.
#
# Under these conditions (here L is the height of the sample: L=1 in this case):
# porepressure = porepressure(t=0) - (Fluid bulk modulus)*log(1 - 0.01*t)
# stress_xx = (bulk - 2*shear/3)*disp_z/L (remember this is effective stress)
# stress_zz = (bulk + 4*shear/3)*disp_z/L (remember this is effective stress)
# Also, the total heat energy must be conserved: this is
# fluid_mass * fluid_heat_cap * temperature + (1 - porosity) * rock_density * rock_heat_cap * temperature * volume
# Since fluid_mass is conserved, and volume = (1 - 0.01*t), this can be solved for temperature:
# temperature = initial_heat_energy / (fluid_mass * fluid_heat_cap + (1 - porosity) * rock_density * rock_heat_cap * (1 - 0.01*t))
#
# Parameters:
# Bulk modulus = 2
# Shear modulus = 1.5
# fluid bulk modulus = 0.5
# initial porepressure = 0.1
# initial temperature = 10
#
# Desired output:
# zdisp = -0.01*t
# p0 = 0.1 - 0.5*log(1-0.01*t)
# stress_xx = stress_yy = -0.01*t
# stress_zz = -0.04*t
# t0 = 11.5 / (0.159 + 0.99 * (1 - 0.01*t))
#
# Regarding the "log" - it comes from preserving fluid mass
#
# Note that the PorousFlowMassVolumetricExpansion and PorousFlowHeatVolumetricExpansion Kernels are used
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -0.5
xmax = 0.5
ymin = -0.5
ymax = 0.5
zmin = -0.5
zmax = 0.5
[]
[GlobalParams]
displacements = 'disp_x disp_y disp_z'
PorousFlowDictator = dictator
block = 0
[]
[Variables]
[disp_x]
[]
[disp_y]
[]
[disp_z]
[]
[pp]
initial_condition = 0.1
[]
[temp]
initial_condition = 10
[]
[]
[BCs]
[confinex]
type = DirichletBC
variable = disp_x
value = 0
boundary = 'left right'
[]
[confiney]
type = DirichletBC
variable = disp_y
value = 0
boundary = 'bottom top'
[]
[basefixed]
type = DirichletBC
variable = disp_z
value = 0
boundary = back
[]
[top_velocity]
type = FunctionDirichletBC
variable = disp_z
function = -0.01*t
boundary = front
[]
[]
[Kernels]
[grad_stress_x]
type = StressDivergenceTensors
variable = disp_x
component = 0
[]
[grad_stress_y]
type = StressDivergenceTensors
variable = disp_y
component = 1
[]
[grad_stress_z]
type = StressDivergenceTensors
variable = disp_z
component = 2
[]
[poro_x]
type = PorousFlowEffectiveStressCoupling
biot_coefficient = 0.3
variable = disp_x
component = 0
[]
[poro_y]
type = PorousFlowEffectiveStressCoupling
biot_coefficient = 0.3
variable = disp_y
component = 1
[]
[poro_z]
type = PorousFlowEffectiveStressCoupling
biot_coefficient = 0.3
component = 2
variable = disp_z
[]
[poro_vol_exp]
type = PorousFlowMassVolumetricExpansion
variable = pp
fluid_component = 0
[]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[temp]
type = PorousFlowEnergyTimeDerivative
variable = temp
[]
[poro_vol_exp_temp]
type = PorousFlowHeatVolumetricExpansion
variable = temp
[]
[]
[AuxVariables]
[stress_xx]
order = CONSTANT
family = MONOMIAL
[]
[stress_xy]
order = CONSTANT
family = MONOMIAL
[]
[stress_xz]
order = CONSTANT
family = MONOMIAL
[]
[stress_yy]
order = CONSTANT
family = MONOMIAL
[]
[stress_yz]
order = CONSTANT
family = MONOMIAL
[]
[stress_zz]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[stress_xx]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_xx
index_i = 0
index_j = 0
[]
[stress_xy]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_xy
index_i = 0
index_j = 1
[]
[stress_xz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_xz
index_i = 0
index_j = 2
[]
[stress_yy]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_yy
index_i = 1
index_j = 1
[]
[stress_yz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_yz
index_i = 1
index_j = 2
[]
[stress_zz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_zz
index_i = 2
index_j = 2
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'temp pp disp_x disp_y disp_z'
number_fluid_phases = 1
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 0.5
density0 = 1
viscosity = 1
thermal_expansion = 0
cv = 1.3
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
temperature = temp
[]
[elasticity_tensor]
type = ComputeElasticityTensor
C_ijkl = '1 1.5'
# bulk modulus is lambda + 2*mu/3 = 1 + 2*1.5/3 = 2
fill_method = symmetric_isotropic
[]
[strain]
type = ComputeSmallStrain
[]
[stress]
type = ComputeLinearElasticStress
[]
[vol_strain]
type = PorousFlowVolumetricStrain
[]
[eff_fluid_pressure]
type = PorousFlowEffectiveFluidPressure
[]
[porosity]
type = PorousFlowPorosity
porosity_zero = 0.1
[]
[rock_heat]
type = PorousFlowMatrixInternalEnergy
specific_heat_capacity = 2.2
density = 0.5
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '0.5 0 0 0 0.5 0 0 0 0.5'
[]
[]
[Postprocessors]
[p0]
type = PointValue
outputs = 'console csv'
execute_on = 'initial timestep_end'
point = '0 0 0'
variable = pp
[]
[t0]
type = PointValue
outputs = 'console csv'
execute_on = 'initial timestep_end'
point = '0 0 0'
variable = temp
[]
[zdisp]
type = PointValue
outputs = csv
point = '0 0 0.5'
use_displaced_mesh = false
variable = disp_z
[]
[stress_xx]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_xx
[]
[stress_yy]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_yy
[]
[stress_zz]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_zz
[]
[fluid_mass]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
outputs = 'console csv'
[]
[total_heat]
type = PorousFlowHeatEnergy
phase = 0
execute_on = 'initial timestep_end'
outputs = 'console csv'
[]
[rock_heat]
type = PorousFlowHeatEnergy
execute_on = 'initial timestep_end'
outputs = 'console csv'
[]
[fluid_heat]
type = PorousFlowHeatEnergy
include_porous_skeleton = false
phase = 0
execute_on = 'initial timestep_end'
outputs = 'console csv'
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it'
petsc_options_value = 'bcgs bjacobi 1E-14 1E-8 10000'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
dt = 2
end_time = 10
[]
[Outputs]
execute_on = 'initial timestep_end'
file_base = heat03
[csv]
type = CSV
[]
[]
(modules/porous_flow/test/tests/dirackernels/bh02reporter.i)
# fully-saturated
# production
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[]
[UserObjects]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-12 0 0 0 1E-12 0 0 0 1E-12'
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
# Because the Variable for this Sink is pp, and pp is associated
# with the fluid-mass conservation equation, this sink is extracting
# fluid mass (and not heat energy or something else)
variable = pp
# The following specfies that the total fluid mass coming out of
# the porespace via this sink in this timestep should be recorded
# in the pls_total_outflow_mass UserObject
SumQuantityUO = borehole_total_outflow_mass
# The following file defines the polyline geometry
# which is just two points in this particular example
weight_reporter='bh02file/column_0'
x_coord_reporter='bh02file/column_1'
y_coord_reporter='bh02file/column_2'
z_coord_reporter='bh02file/column_3'
# First, we want Peacemans f to be a function of porepressure (and not
# temperature or something else). So bottom_p_or_t is actually porepressure
function_of = pressure
fluid_phase = 0
# The bottomhole pressure
bottom_p_or_t = 0
# In this example there is no increase of the wellbore pressure
# due to gravity:
unit_weight = '0 0 0'
# PeacemanBoreholes should almost always have use_mobility = true
use_mobility = true
# This is a production wellbore (a sink of fluid that removes fluid from porespace)
character = 1
[]
[]
[VectorPostprocessors]
[bh02file]
type = CSVReader
csv_file = bh02.bh
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
indirect_dependencies = 'fluid_mass1 fluid_mass0 bh_report'
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 0.5
dt = 1E-2
solve_type = NEWTON
[]
[Outputs]
exodus = false
csv = true
execute_on = timestep_end
[]
(modules/porous_flow/test/tests/dirackernels/bh_except07.i)
# PorousFlowPeacemanBorehole exception test
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = TimeDerivative
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-12 0 0 0 1E-12 0 0 0 1E-12'
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
bottom_p_or_t = 0
fluid_phase = 0
point_file = bh02.bh
use_mobility = true
SumQuantityUO = borehole_total_outflow_mass
variable = pp
unit_weight = '0 0 0'
character = 1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 0.5
dt = 1E-2
solve_type = NEWTON
[]
(modules/porous_flow/examples/lava_lamp/2phase_convection.i)
# Two phase density-driven convection of dissolved CO2 in brine
#
# Initially, the model has a gas phase at the top with a saturation of 0.29
# (which corresponds to an initial value of zi = 0.2).
# Diffusion of the dissolved CO2
# component from the saturated liquid to the unsaturated liquid below reduces the
# amount of CO2 in the gas phase. As the density of the CO2-saturated brine is greater
# than the unsaturated brine, a gravitational instability arises and density-driven
# convection of CO2-rich fingers descend into the unsaturated brine.
#
# The instability is seeded by a random perturbation to the porosity field.
# Mesh adaptivity is used to refine the mesh as the fingers form.
#
# Note: this model is computationally expensive, so should be run with multiple cores,
# preferably on a cluster.
[GlobalParams]
PorousFlowDictator = 'dictator'
gravity = '0 -9.81 0'
[]
[Adaptivity]
max_h_level = 2
marker = marker
initial_marker = initial
initial_steps = 2
[Indicators]
[indicator]
type = GradientJumpIndicator
variable = zi
[]
[]
[Markers]
[marker]
type = ErrorFractionMarker
indicator = indicator
refine = 0.8
[]
[initial]
type = BoxMarker
bottom_left = '0 1.95 0'
top_right = '2 2 0'
inside = REFINE
outside = DO_NOTHING
[]
[]
[]
[Mesh]
type = GeneratedMesh
dim = 2
ymax = 2
xmax = 2
ny = 40
nx = 40
bias_y = 0.95
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pgas
[]
[flux0]
type = PorousFlowAdvectiveFlux
fluid_component = 0
variable = pgas
[]
[diff0]
type = PorousFlowDispersiveFlux
fluid_component = 0
variable = pgas
disp_long = '0 0'
disp_trans = '0 0'
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = zi
[]
[flux1]
type = PorousFlowAdvectiveFlux
fluid_component = 1
variable = zi
[]
[diff1]
type = PorousFlowDispersiveFlux
fluid_component = 1
variable = zi
disp_long = '0 0'
disp_trans = '0 0'
[]
[]
[AuxVariables]
[xnacl]
initial_condition = 0.01
[]
[saturation_gas]
order = FIRST
family = MONOMIAL
[]
[xco2l]
order = FIRST
family = MONOMIAL
[]
[density_liquid]
order = FIRST
family = MONOMIAL
[]
[porosity]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[saturation_gas]
type = PorousFlowPropertyAux
variable = saturation_gas
property = saturation
phase = 1
execute_on = 'timestep_end'
[]
[xco2l]
type = PorousFlowPropertyAux
variable = xco2l
property = mass_fraction
phase = 0
fluid_component = 1
execute_on = 'timestep_end'
[]
[density_liquid]
type = PorousFlowPropertyAux
variable = density_liquid
property = density
phase = 0
execute_on = 'timestep_end'
[]
[]
[Variables]
[pgas]
[]
[zi]
scaling = 1e4
[]
[]
[ICs]
[pressure]
type = FunctionIC
function = 10e6-9.81*1000*y
variable = pgas
[]
[zi]
type = BoundingBoxIC
variable = zi
x1 = 0
x2 = 2
y1 = 1.95
y2 = 2
inside = 0.2
outside = 0
[]
[porosity]
type = RandomIC
variable = porosity
min = 0.25
max = 0.275
seed = 0
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pgas zi'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureConst
pc = 0
[]
[fs]
type = PorousFlowBrineCO2
brine_fp = brine
co2_fp = co2
capillary_pressure = pc
[]
[]
[FluidProperties]
[co2sw]
type = CO2FluidProperties
[]
[co2]
type = TabulatedBicubicFluidProperties
fp = co2sw
[]
[brine]
type = BrineFluidProperties
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
temperature = '45'
[]
[brineco2]
type = PorousFlowFluidState
gas_porepressure = 'pgas'
z = 'zi'
temperature_unit = Celsius
xnacl = 'xnacl'
capillary_pressure = pc
fluid_state = fs
[]
[porosity]
type = PorousFlowPorosityConst
porosity = porosity
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-11 0 0 0 1e-11 0 0 0 1e-11'
[]
[relperm_water]
type = PorousFlowRelativePermeabilityCorey
phase = 0
n = 2
s_res = 0.1
sum_s_res = 0.2
[]
[relperm_gas]
type = PorousFlowRelativePermeabilityCorey
phase = 1
n = 2
s_res = 0.1
sum_s_res = 0.2
[]
[diffusivity]
type = PorousFlowDiffusivityConst
diffusion_coeff = '2e-9 2e-9 2e-9 2e-9'
tortuosity = '1 1'
[]
[]
[Preconditioning]
active = basic
[mumps_is_best_for_parallel_jobs]
type = SMP
full = true
petsc_options_iname = '-pc_type -pc_factor_mat_solver_package'
petsc_options_value = ' lu mumps'
[]
[basic]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -sub_pc_type -sub_pc_factor_shift_type -pc_asm_overlap'
petsc_options_value = 'gmres asm lu NONZERO 2 '
[]
[]
[Executioner]
type = Transient
solve_type = NEWTON
end_time = 1e6
nl_max_its = 25
l_max_its = 100
dtmax = 1e4
nl_abs_tol = 1e-6
[TimeStepper]
type = IterationAdaptiveDT
dt = 10
growth_factor = 2
cutback_factor = 0.5
[]
[]
[Functions]
[flux]
type = ParsedFunction
symbol_values = 'delta_xco2 dt'
symbol_names = 'dx dt'
expression = 'dx/dt'
[]
[]
[Postprocessors]
[total_co2_in_gas]
type = PorousFlowFluidMass
phase = 1
fluid_component = 1
[]
[total_co2_in_liquid]
type = PorousFlowFluidMass
phase = 0
fluid_component = 1
[]
[numdofs]
type = NumDOFs
[]
[delta_xco2]
type = ChangeOverTimePostprocessor
postprocessor = total_co2_in_liquid
[]
[dt]
type = TimestepSize
[]
[flux]
type = FunctionValuePostprocessor
function = flux
[]
[]
[Outputs]
print_linear_residuals = false
perf_graph = true
exodus = true
csv = true
[]
(modules/porous_flow/test/tests/dirackernels/bh_except14.i)
# fully-saturated
# production
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-12 0 0 0 1E-12 0 0 0 1E-12'
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
bottom_p_or_t = 0
fluid_phase = 0
point_file = bh02_huge.bh
SumQuantityUO = borehole_total_outflow_mass
variable = pp
unit_weight = '0 0 0'
character = 1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 0.5
dt = 1E-2
solve_type = NEWTON
[]
(modules/porous_flow/test/tests/energy_conservation/heat04_rz.i)
# The sample is a single unit element in RZ coordinates
# A constant velocity is applied to the outer boundary is free to move as a source injects heat and fluid into the system
# There is no fluid flow or heat flow.
# Heat energy conservation is checked.
# Mass conservation is checked
[Mesh]
type = GeneratedMesh
dim = 2
nx = 1
ny = 1
xmin = 1
xmax = 2
ymin = -0.5
ymax = 0.5
coord_type = RZ
[]
[GlobalParams]
displacements = 'disp_r disp_z'
PorousFlowDictator = dictator
block = 0
biot_coefficient = 0.3
[]
[Variables]
[disp_r]
[]
[disp_z]
[]
[pp]
initial_condition = 0.1
[]
[temp]
initial_condition = 10
[]
[]
[BCs]
[plane_strain]
type = DirichletBC
variable = disp_z
value = 0
boundary = 'bottom top'
[]
[rmin_fixed]
type = DirichletBC
variable = disp_r
value = 0
boundary = left
[]
[contract]
type = FunctionDirichletBC
variable = disp_r
function = -0.01*t
boundary = right
[]
[]
[PorousFlowFullySaturated]
coupling_type = ThermoHydroMechanical
porepressure = pp
temperature = temp
fp = simple_fluid
[]
[DiracKernels]
[heat_source]
type = PorousFlowPointSourceFromPostprocessor
point = '1.5 0 0'
variable = temp
mass_flux = 10
[]
[fluid_source]
type = PorousFlowPointSourceFromPostprocessor
point = '1.5 0 0'
variable = pp
mass_flux = 1
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 0.5
density0 = 1
viscosity = 1
thermal_expansion = 0
cv = 1.3
[]
[]
[Materials]
[elasticity_tensor]
type = ComputeElasticityTensor
C_ijkl = '1 1.5'
# bulk modulus is lambda + 2*mu/3 = 1 + 2*1.5/3 = 2
fill_method = symmetric_isotropic
[]
[strain]
type = ComputeAxisymmetricRZSmallStrain
[]
[stress]
type = ComputeLinearElasticStress
[]
[porosity]
type = PorousFlowPorosity
porosity_zero = 0.1
[]
[rock_heat]
type = PorousFlowMatrixInternalEnergy
specific_heat_capacity = 2.2
density = 0.5
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '0.5 0 0 0 0.5 0 0 0 0.5'
[]
[thermal_cond]
type = PorousFlowThermalConductivityIdeal
dry_thermal_conductivity = '1 0 0 0 1 0 0 0 1'
[]
[]
[Postprocessors]
[p0]
type = PointValue
outputs = 'console csv'
execute_on = 'initial timestep_end'
point = '1 0 0'
variable = pp
[]
[t0]
type = PointValue
outputs = 'console csv'
execute_on = 'initial timestep_end'
point = '1 0 0'
variable = temp
[]
[rdisp]
type = PointValue
outputs = 'csv console'
point = '2 0 0'
use_displaced_mesh = false
variable = disp_r
[]
[fluid_mass]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
outputs = 'console csv'
[]
[total_heat]
type = PorousFlowHeatEnergy
phase = 0
execute_on = 'initial timestep_end'
outputs = 'console csv'
[]
[rock_heat]
type = PorousFlowHeatEnergy
execute_on = 'initial timestep_end'
outputs = 'console csv'
[]
[fluid_heat]
type = PorousFlowHeatEnergy
include_porous_skeleton = false
phase = 0
execute_on = 'initial timestep_end'
outputs = 'console csv'
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
[]
[]
[Executioner]
type = Transient
solve_type = Newton
dt = 2
end_time = 10
[]
[Outputs]
execute_on = 'initial timestep_end'
[csv]
type = CSV
[]
[]
(modules/porous_flow/examples/co2_intercomparison/1Dradial/1Dradial.i)
# Intercomparison problem 3: Radial flow from an injection well
#
# From Pruess et al, Code intercomparison builds confidence in
# numerical simulation models for geologic disposal of CO2, Energy 29 (2004)
#
# A variation with zero salinity can be run by changing the initial condition
# of the AuxVariable xnacl
[Mesh]
type = GeneratedMesh
dim = 1
nx = 500
xmax = 10000
bias_x = 1.01
coord_type = 'RZ'
rz_coord_axis = Y
[]
[GlobalParams]
PorousFlowDictator = 'dictator'
gravity = '0 0 0'
[]
[AuxVariables]
[pressure_liquid]
order = CONSTANT
family = MONOMIAL
[]
[saturation_gas]
order = CONSTANT
family = MONOMIAL
[]
[x1]
order = CONSTANT
family = MONOMIAL
[]
[y0]
order = CONSTANT
family = MONOMIAL
[]
[xnacl]
initial_condition = 0.15
[]
[]
[AuxKernels]
[pressure_liquid]
type = PorousFlowPropertyAux
variable = pressure_liquid
property = pressure
phase = 0
execute_on = 'timestep_end'
[]
[saturation_gas]
type = PorousFlowPropertyAux
variable = saturation_gas
property = saturation
phase = 1
execute_on = 'timestep_end'
[]
[x1]
type = PorousFlowPropertyAux
variable = x1
property = mass_fraction
phase = 0
fluid_component = 1
execute_on = 'timestep_end'
[]
[y0]
type = PorousFlowPropertyAux
variable = y0
property = mass_fraction
phase = 1
fluid_component = 0
execute_on = 'timestep_end'
[]
[]
[Variables]
[pgas]
initial_condition = 12e6
[]
[zi]
initial_condition = 0
scaling = 1e4
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pgas
[]
[flux0]
type = PorousFlowAdvectiveFlux
fluid_component = 0
variable = pgas
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = zi
[]
[flux1]
type = PorousFlowAdvectiveFlux
fluid_component = 1
variable = zi
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pgas zi'
number_fluid_phases = 2
number_fluid_components = 3
[]
[pc]
type = PorousFlowCapillaryPressureVG
alpha = 5.099e-5
m = 0.457
sat_lr = 0.0
pc_max = 1e7
[]
[fs]
type = PorousFlowBrineCO2
brine_fp = brine
co2_fp = co2
capillary_pressure = pc
[]
[]
[FluidProperties]
[co2sw]
type = CO2FluidProperties
[]
[co2]
type = TabulatedBicubicFluidProperties
fp = co2sw
[]
[water]
type = Water97FluidProperties
[]
[watertab]
type = TabulatedBicubicFluidProperties
fp = water
temperature_min = 273.15
temperature_max = 573.15
fluid_property_output_file = water_fluid_properties.csv
# Comment out the fp parameter and uncomment below to use the newly generated tabulation
# fluid_property_file = water_fluid_properties.csv
[]
[brine]
type = BrineFluidProperties
water_fp = watertab
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
temperature = '45'
[]
[brineco2]
type = PorousFlowFluidState
gas_porepressure = 'pgas'
z = 'zi'
temperature_unit = Celsius
xnacl = 'xnacl'
capillary_pressure = pc
fluid_state = fs
[]
[porosity]
type = PorousFlowPorosityConst
porosity = '0.12'
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-13 0 0 0 1e-13 0 0 0 1e-13'
[]
[relperm_water]
type = PorousFlowRelativePermeabilityVG
m = 0.457
phase = 0
s_res = 0.3
sum_s_res = 0.35
[]
[relperm_gas]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 1
s_res = 0.05
sum_s_res = 0.35
[]
[]
[BCs]
[rightwater]
type = PorousFlowPiecewiseLinearSink
boundary = 'right'
variable = pgas
use_mobility = true
PorousFlowDictator = dictator
fluid_phase = 0
multipliers = '0 1e9'
PT_shift = '12e6'
pt_vals = '0 1e9'
mass_fraction_component = 0
use_relperm = true
[]
[rightco2]
type = PorousFlowPiecewiseLinearSink
variable = zi
boundary = 'right'
use_mobility = true
PorousFlowDictator = dictator
fluid_phase = 1
multipliers = '0 1e9'
PT_shift = '12e6'
pt_vals = '0 1e9'
mass_fraction_component = 1
use_relperm = true
[]
[]
[DiracKernels]
[source]
type = PorousFlowSquarePulsePointSource
point = '0 0 0'
mass_flux = 1
variable = zi
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -sub_pc_type -sub_pc_factor_shift_type'
petsc_options_value = 'gmres bjacobi lu NONZERO'
[]
[]
[Executioner]
type = Transient
solve_type = NEWTON
end_time = 8.64e8
nl_max_its = 25
l_max_its = 100
dtmax = 5e6
[TimeStepper]
type = IterationAdaptiveDT
dt = 100
[]
[]
[VectorPostprocessors]
[vars]
type = NodalValueSampler
sort_by = x
variable = 'pgas zi xnacl'
execute_on = 'timestep_end'
outputs = spatial
[]
[auxvars]
type = ElementValueSampler
sort_by = x
variable = 'saturation_gas x1 y0'
execute_on = 'timestep_end'
outputs = spatial
[]
[]
[Postprocessors]
[pgas]
type = PointValue
point = '25.25 0 0'
variable = pgas
outputs = time
[]
[sgas]
type = PointValue
point = '25.25 0 0'
variable = saturation_gas
outputs = time
[]
[zi]
type = PointValue
point = '25.25 0 0'
variable = zi
outputs = time
[]
[massgas]
type = PorousFlowFluidMass
fluid_component = 1
outputs = time
[]
[x1]
type = PointValue
point = '25.25 0 0'
variable = x1
outputs = time
[]
[y0]
type = PointValue
point = '25.25 0 0'
variable = y0
outputs = time
[]
[xnacl]
type = PointValue
point = '25.25 0 0'
variable = xnacl
outputs = time
[]
[]
[Outputs]
print_linear_residuals = false
perf_graph = true
sync_times = '2.592e6 8.64e6 8.64e7 8.64e8'
[time]
type = CSV
[]
[spatial]
type = CSV
sync_only = true
[]
[]
(modules/porous_flow/test/tests/gravity/grav02f.i)
# Checking that gravity head is established in the transient situation when 0<=saturation<=1 (note the less-than-or-equal-to).
# 2phase (PS), 2components, van Genuchten capillary pressure, constant fluid bulk-moduli for each phase, constant viscosity,
# constant permeability, Corey relative permeabilities with residual saturation
[Mesh]
type = GeneratedMesh
dim = 2
ny = 10
ymax = 100
[]
[GlobalParams]
PorousFlowDictator = dictator
gravity = '0 -10 0'
[]
[Variables]
[ppwater]
initial_condition = 1.5e6
[]
[sgas]
initial_condition = 0.3
[]
[]
[AuxVariables]
[massfrac_ph0_sp0]
initial_condition = 1
[]
[massfrac_ph1_sp0]
initial_condition = 0
[]
[ppgas]
family = MONOMIAL
order = CONSTANT
[]
[swater]
family = MONOMIAL
order = CONSTANT
[]
[relpermwater]
family = MONOMIAL
order = CONSTANT
[]
[relpermgas]
family = MONOMIAL
order = CONSTANT
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = ppwater
[]
[flux0]
type = PorousFlowAdvectiveFlux
fluid_component = 0
variable = ppwater
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = sgas
[]
[flux1]
type = PorousFlowAdvectiveFlux
fluid_component = 1
variable = sgas
[]
[]
[AuxKernels]
[ppgas]
type = PorousFlowPropertyAux
property = pressure
phase = 1
variable = ppgas
[]
[swater]
type = PorousFlowPropertyAux
property = saturation
phase = 0
variable = swater
[]
[relpermwater]
type = MaterialStdVectorAux
property = PorousFlow_relative_permeability_qp
index = 0
variable = relpermwater
[]
[relpermgas]
type = PorousFlowPropertyAux
property = relperm
phase = 1
variable = relpermgas
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'ppwater sgas'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-4
pc_max = 2e5
[]
[]
[FluidProperties]
[simple_fluid0]
type = SimpleFluidProperties
bulk_modulus = 2e9
density0 = 1000
viscosity = 1e-3
thermal_expansion = 0
[]
[simple_fluid1]
type = SimpleFluidProperties
bulk_modulus = 2e9
density0 = 10
viscosity = 1e-5
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow2PhasePS
phase0_porepressure = ppwater
phase1_saturation = sgas
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
mass_fraction_vars = 'massfrac_ph0_sp0 massfrac_ph1_sp0'
[]
[simple_fluid0]
type = PorousFlowSingleComponentFluid
fp = simple_fluid0
phase = 0
[]
[simple_fluid1]
type = PorousFlowSingleComponentFluid
fp = simple_fluid1
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-11 0 0 0 1e-11 0 0 0 1e-11'
[]
[relperm_water]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
s_res = 0.25
sum_s_res = 0.35
[]
[relperm_gas]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 1
s_res = 0.1
sum_s_res = 0.35
[]
[]
[Postprocessors]
[mass_ph0]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
[]
[mass_ph1]
type = PorousFlowFluidMass
fluid_component = 1
execute_on = 'initial timestep_end'
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_stol -snes_max_it'
petsc_options_value = 'bcgs bjacobi 1E-13 15'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
end_time = 1e5
[TimeStepper]
type = IterationAdaptiveDT
dt = 1e4
[]
[]
[Outputs]
execute_on = 'initial timestep_end'
file_base = grav02f
exodus = true
perf_graph = true
csv = false
[]
(modules/porous_flow/test/tests/dirackernels/theis1.i)
# Theis problem: Flow to single sink
# SinglePhase
# Cartesian mesh with logarithmic distribution in x and y.
[Mesh]
type = GeneratedMesh
dim = 2
nx = 20
ny = 20
bias_x = 1.1
bias_y = 1.1
ymax = 100
xmax = 100
[]
[GlobalParams]
PorousFlowDictator = dictator
compute_enthalpy = false
compute_internal_energy = false
[]
[Variables]
[pp]
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[flux]
type = PorousFlowAdvectiveFlux
variable = pp
gravity = '0 0 0'
fluid_component = 0
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
density0 = 1000
viscosity = 0.001
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.2
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-14 0 0 0 1E-14 0 0 0 1E-14'
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 0
phase = 0
[]
[]
[Postprocessors]
[porepressure]
type = PointValue
point = '0 0 0'
variable = pp
execute_on = 'initial timestep_end'
[]
[total_mass]
type = PorousFlowFluidMass
execute_on = 'initial timestep_end'
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
[]
[]
[Executioner]
type = Transient
solve_type = Newton
dt = 200
end_time = 1E3
nl_abs_tol = 1e-10
[]
[Outputs]
perf_graph = true
file_base = theis1
[csv]
type = CSV
execute_on = final
[]
[]
[ICs]
[PressureIC]
variable = pp
type = ConstantIC
value = 20e6
[]
[]
[DiracKernels]
[sink]
type = PorousFlowSquarePulsePointSource
end_time = 1000
point = '0 0 0'
mass_flux = -0.04
variable = pp
[]
[]
[BCs]
[right]
type = DirichletBC
variable = pp
value = 20e6
boundary = right
[]
[top]
type = DirichletBC
variable = pp
value = 20e6
boundary = top
[]
[]
[VectorPostprocessors]
[pressure]
type = SideValueSampler
variable = pp
sort_by = x
execute_on = timestep_end
boundary = bottom
[]
[]
(modules/porous_flow/test/tests/energy_conservation/heat04.i)
# The sample is a single unit element, with fixed displacements on
# all sides. A heat source of strength S (J/m^3/s) is applied into
# the element. There is no fluid flow or heat flow. The rise
# in temperature, porepressure and stress, and the change in porosity is
# matched with theory.
#
# In this case, fluid mass must be conserved, and there is no
# volumetric strain, so
# porosity * fluid_density = constant
# Also, the energy-density in the rock-fluid system increases with S:
# d/dt [(1 - porosity) * rock_density * rock_heat_cap * T + porosity * fluid_density * fluid_heat_cap * T] = S
# Also, the porosity evolves according to THM as
# porosity = biot + (porosity0 - biot) * exp( (biot - 1) * P / fluid_bulk + rock_thermal_exp * T)
# Finally, the effective stress must be exactly zero (as there is
# no strain).
#
# Let us assume that
# fluid_density = dens0 * exp(P / fluid_bulk - fluid_thermal_exp * T)
# Then the conservation of fluid mass means
# porosity = por0 * exp(- P / fluid_bulk + fluid_thermal_exp * T)
# where dens0 * por0 = the initial fluid mass.
# The last expression for porosity, combined with the THM one,
# and assuming that biot = 1 for simplicity, gives
# porosity = 1 + (porosity0 - 1) * exp(rock_thermal_exp * T) = por0 * exp(- P / fluid_bulk + fluid_thermal_exp * T) .... (A)
#
# This stuff may be substituted into the heat energy-density equation:
# S = d/dt [(1 - porosity0) * exp(rock_thermal_exp * T) * rock_density * rock_heat_cap * T + porosity * fluid_density * fluid_heat_cap * T]
#
# If S is constant then
# S * t = (1 - porosity0) * exp(rock_thermal_exp * T) * rock_density * rock_heat_cap * T + porosity * fluid_density * fluid_heat_cap * T
# with T(t=0) = 0 then Eqn(A) implies that por0 = porosity0 and
# P / fluid_bulk = fluid_thermal_exp * T - log(1 + (por0 - 1) * exp(rock_thermal_exp * T)) + log(por0)
#
# Parameters:
# A = 2
# fluid_bulk = 2.0
# dens0 = 3.0
# fluid_thermal_exp = 0.5
# fluid_heat_cap = 2
# por0 = 0.5
# rock_thermal_exp = 0.25
# rock_density = 5
# rock_heat_capacity = 0.2
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -0.5
xmax = 0.5
ymin = -0.5
ymax = 0.5
zmin = -0.5
zmax = 0.5
[]
[FluidProperties]
[the_simple_fluid]
type = SimpleFluidProperties
thermal_expansion = 0.5
cv = 2
cp = 2
bulk_modulus = 2.0
density0 = 3.0
[]
[]
[GlobalParams]
displacements = 'disp_x disp_y disp_z'
PorousFlowDictator = dictator
block = 0
[]
[Variables]
[disp_x]
[]
[disp_y]
[]
[disp_z]
[]
[pp]
[]
[temp]
[]
[]
[BCs]
[confinex]
type = DirichletBC
variable = disp_x
value = 0
boundary = 'left right'
[]
[confiney]
type = DirichletBC
variable = disp_y
value = 0
boundary = 'bottom top'
[]
[confinez]
type = DirichletBC
variable = disp_z
value = 0
boundary = 'back front'
[]
[]
[Kernels]
[grad_stress_x]
type = StressDivergenceTensors
variable = disp_x
component = 0
[]
[grad_stress_y]
type = StressDivergenceTensors
variable = disp_y
component = 1
[]
[grad_stress_z]
type = StressDivergenceTensors
variable = disp_z
component = 2
[]
[poro_x]
type = PorousFlowEffectiveStressCoupling
biot_coefficient = 1.0
variable = disp_x
component = 0
[]
[poro_y]
type = PorousFlowEffectiveStressCoupling
biot_coefficient = 1.0
variable = disp_y
component = 1
[]
[poro_z]
type = PorousFlowEffectiveStressCoupling
biot_coefficient = 1.0
component = 2
variable = disp_z
[]
[poro_vol_exp]
type = PorousFlowMassVolumetricExpansion
variable = pp
fluid_component = 0
[]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[temp]
type = PorousFlowEnergyTimeDerivative
variable = temp
[]
[poro_vol_exp_temp]
type = PorousFlowHeatVolumetricExpansion
variable = temp
[]
[heat_source]
type = BodyForce
function = 1
variable = temp
[]
[]
[Functions]
[err_T_fcn]
type = ParsedFunction
symbol_names = 'por0 rte temp rd rhc m0 fhc source'
symbol_values = '0.5 0.25 t0 5 0.2 1.5 2 1'
expression = '((1-por0)*exp(rte*temp)*rd*rhc*temp+m0*fhc*temp-source*t)/(source*t)'
[]
[err_pp_fcn]
type = ParsedFunction
symbol_names = 'por0 rte temp rd rhc m0 fhc source bulk pp fte'
symbol_values = '0.5 0.25 t0 5 0.2 1.5 2 1 2 p0 0.5'
expression = '(bulk*(fte*temp-log(1+(por0-1)*exp(rte*temp))+log(por0))-pp)/pp'
[]
[]
[AuxVariables]
[stress_xx]
order = CONSTANT
family = MONOMIAL
[]
[stress_xy]
order = CONSTANT
family = MONOMIAL
[]
[stress_xz]
order = CONSTANT
family = MONOMIAL
[]
[stress_yy]
order = CONSTANT
family = MONOMIAL
[]
[stress_yz]
order = CONSTANT
family = MONOMIAL
[]
[stress_zz]
order = CONSTANT
family = MONOMIAL
[]
[porosity]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[stress_xx]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_xx
index_i = 0
index_j = 0
[]
[stress_xy]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_xy
index_i = 0
index_j = 1
[]
[stress_xz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_xz
index_i = 0
index_j = 2
[]
[stress_yy]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_yy
index_i = 1
index_j = 1
[]
[stress_yz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_yz
index_i = 1
index_j = 2
[]
[stress_zz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_zz
index_i = 2
index_j = 2
[]
[porosity]
type = PorousFlowPropertyAux
property = porosity
variable = porosity
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'temp pp disp_x disp_y disp_z'
number_fluid_phases = 1
number_fluid_components = 1
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
temperature = temp
[]
[elasticity_tensor]
type = ComputeElasticityTensor
C_ijkl = '1 1.5'
# bulk modulus is lambda + 2*mu/3 = 1 + 2*1.5/3 = 2
fill_method = symmetric_isotropic
[]
[strain]
type = ComputeSmallStrain
[]
[stress]
type = ComputeLinearElasticStress
[]
[vol_strain]
type = PorousFlowVolumetricStrain
[]
[eff_fluid_pressure]
type = PorousFlowEffectiveFluidPressure
[]
[porosity]
type = PorousFlowPorosity
thermal = true
fluid = true
mechanical = true
ensure_positive = false
biot_coefficient = 1.0
porosity_zero = 0.5
thermal_expansion_coeff = 0.25
solid_bulk = 2
[]
[rock_heat]
type = PorousFlowMatrixInternalEnergy
specific_heat_capacity = 0.2
density = 5.0
[]
[ppss]
type = PorousFlow1PhaseFullySaturated
porepressure = pp
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
temperature_unit = Kelvin
fp = the_simple_fluid
phase = 0
[]
[]
[Postprocessors]
[p0]
type = PointValue
outputs = 'console csv'
execute_on = 'timestep_end'
point = '0 0 0'
variable = pp
[]
[t0]
type = PointValue
outputs = 'console csv'
execute_on = 'timestep_end'
point = '0 0 0'
variable = temp
[]
[porosity]
type = PointValue
outputs = 'console csv'
execute_on = 'timestep_end'
point = '0 0 0'
variable = porosity
[]
[stress_xx]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_xx
[]
[stress_yy]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_yy
[]
[stress_zz]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_zz
[]
[fluid_mass]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'timestep_end'
outputs = 'console csv'
[]
[total_heat]
type = PorousFlowHeatEnergy
phase = 0
execute_on = 'timestep_end'
outputs = 'console csv'
[]
[err_T]
type = FunctionValuePostprocessor
function = err_T_fcn
[]
[err_P]
type = FunctionValuePostprocessor
function = err_pp_fcn
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_rtol -snes_max_it'
petsc_options_value = 'bcgs bjacobi 1E-12 10000'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
dt = 1
end_time = 5
[]
[Outputs]
execute_on = 'initial timestep_end'
file_base = heat04
[csv]
type = CSV
[]
[]
(modules/porous_flow/test/tests/dirackernels/bh_except16.i)
# fully-saturated
# production
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-12 0 0 0 1E-12 0 0 0 1E-12'
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
function_of = temperature
bottom_p_or_t = 0
fluid_phase = 0
point_file = bh02.bh
SumQuantityUO = borehole_total_outflow_mass
variable = pp
unit_weight = '0 0 0'
character = 1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 0.5
dt = 1E-2
solve_type = NEWTON
[]
(modules/porous_flow/test/tests/mass_conservation/mass11.i)
# The sample is a single unit element, with roller BCs on the sides and bottom.
# The top is free to move and fluid is injected at a constant rate of 1kg/s
# There is no fluid flow.
# Fluid mass conservation is checked.
# Under these conditions the fluid mass should increase at 1kg/s
# The porepressure should increase: rho0 * exp(P/bulk) = rho * exp(P0/bulk) + 1*t
# The stress_zz should be exactly biot * P since total stress is zero
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -0.5
xmax = 0.5
ymin = -0.5
ymax = 0.5
zmin = -0.5
zmax = 0.5
[]
[GlobalParams]
displacements = 'disp_x disp_y disp_z'
PorousFlowDictator = dictator
block = 0
[]
[Variables]
[disp_x]
[]
[disp_y]
[]
[disp_z]
[]
[porepressure]
initial_condition = 0.1
[]
[]
[BCs]
[confinex]
type = DirichletBC
variable = disp_x
value = 0
boundary = 'left right'
[]
[confiney]
type = DirichletBC
variable = disp_y
value = 0
boundary = 'bottom top'
[]
[basefixed]
type = DirichletBC
variable = disp_z
value = 0
boundary = back
[]
[]
[Kernels]
[grad_stress_x]
type = StressDivergenceTensors
variable = disp_x
component = 0
[]
[grad_stress_y]
type = StressDivergenceTensors
variable = disp_y
component = 1
[]
[grad_stress_z]
type = StressDivergenceTensors
variable = disp_z
component = 2
[]
[poro_x]
type = PorousFlowEffectiveStressCoupling
biot_coefficient = 0.3
variable = disp_x
component = 0
[]
[poro_y]
type = PorousFlowEffectiveStressCoupling
biot_coefficient = 0.3
variable = disp_y
component = 1
[]
[poro_z]
type = PorousFlowEffectiveStressCoupling
biot_coefficient = 0.3
component = 2
variable = disp_z
[]
[poro_vol_exp]
type = PorousFlowMassVolumetricExpansion
variable = porepressure
fluid_component = 0
[]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = porepressure
[]
[]
[DiracKernels]
[inject]
type = PorousFlowPointSourceFromPostprocessor
point = '0 0 0'
mass_flux = 1.0
variable = porepressure
[]
[]
[AuxVariables]
[stress_xx]
order = CONSTANT
family = MONOMIAL
[]
[stress_xy]
order = CONSTANT
family = MONOMIAL
[]
[stress_xz]
order = CONSTANT
family = MONOMIAL
[]
[stress_yy]
order = CONSTANT
family = MONOMIAL
[]
[stress_yz]
order = CONSTANT
family = MONOMIAL
[]
[stress_zz]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[stress_xx]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_xx
index_i = 0
index_j = 0
[]
[stress_xy]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_xy
index_i = 0
index_j = 1
[]
[stress_xz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_xz
index_i = 0
index_j = 2
[]
[stress_yy]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_yy
index_i = 1
index_j = 1
[]
[stress_yz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_yz
index_i = 1
index_j = 2
[]
[stress_zz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_zz
index_i = 2
index_j = 2
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 0.5
density0 = 1
thermal_expansion = 0
viscosity = 1
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[elasticity_tensor]
type = ComputeElasticityTensor
C_ijkl = '1 1.5'
# bulk modulus is lambda + 2*mu/3 = 1 + 2*1.5/3 = 2
fill_method = symmetric_isotropic
[]
[strain]
type = ComputeSmallStrain
[]
[stress]
type = ComputeLinearElasticStress
[]
[vol_strain]
type = PorousFlowVolumetricStrain
[]
[eff_fluid_pressure]
type = PorousFlowEffectiveFluidPressure
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = porepressure
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '0.5 0 0 0 0.5 0 0 0 0.5'
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'porepressure disp_x disp_y disp_z'
number_fluid_phases = 1
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1
[]
[]
[Postprocessors]
[p0]
type = PointValue
outputs = 'console csv'
execute_on = 'initial timestep_end'
point = '0 0 0'
variable = porepressure
[]
[zdisp]
type = PointValue
outputs = csv
point = '0 0 0.5'
use_displaced_mesh = false
variable = disp_z
[]
[stress_xx]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_xx
[]
[stress_yy]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_yy
[]
[stress_zz]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_zz
[]
[fluid_mass]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
outputs = 'console csv'
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it'
petsc_options_value = 'bcgs bjacobi 1E-14 1E-8 10000'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
start_time = 0
end_time = 10
dt = 2
[]
[Outputs]
execute_on = 'initial timestep_end'
[csv]
type = CSV
[]
[]
(modules/porous_flow/test/tests/dirackernels/pls02.i)
# fully-saturated situation with a poly-line sink with use_mobility=true
# The poly-line consists of 2 points, and has a length
# of 0.5. Each point is weighted with a weight of 0.1
# The PorousFlowPolyLineSink has
# p_or_t_vals = 0 1E7
# fluxes = 0 1
# so that for 0<=porepressure<=1E7
# base flux = porepressure * 1E-6 * mobility (measured in kg.m^-1.s^-1),
# and when multiplied by the poly-line length, and
# the weighting of each point, the mass flux is
# flux = porepressure * 0.5*E-8 * mobility (kg.s^-1).
#
# The fluid and matrix properties are:
# porosity = 0.1
# element volume = 8 m^3
# density = dens0 * exp(P / bulk), with bulk = 2E7
# initial porepressure P0 = 1E7
# viscosity = 0.2
# So, fluid mass = 0.8 * density (kg)
#
# The equation to solve is
# d(Mass)/dt = - porepressure * 0.5*E-8 * density / viscosity
#
# PorousFlow discretises time to conserve mass, so to march
# forward in time, we must solve
# Mass(dt) = Mass(0) - P * 0.5E-8 * density / viscosity * dt
# or
# 0.8 * dens0 * exp(P/bulk) = 0.8 * dens0 * exp(P0/bulk) - P * 0.5E-8 * density / viscosity * dt
# For the numbers written above this gives
# P(t=1) = 6.36947 MPa
# which is given precisely by MOOSE
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[]
[UserObjects]
[pls_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e7
viscosity = 0.2
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-12 0 0 0 1E-12 0 0 0 1E-12'
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[]
[DiracKernels]
[pls]
# This defines a sink that has strength
# f = L(P) * relperm * L_seg
# where
# L(P) is a piecewise-linear function of porepressure
# that is zero at pp=0 and 1 at pp=1E7
# relperm is the relative permeability of the fluid
# L_seg is the line-segment length associated with
# the Dirac points defined in the file pls02.bh
type = PorousFlowPolyLineSink
# Because the Variable for this Sink is pp, and pp is associated
# with the fluid-mass conservation equation, this sink is extracting
# fluid mass (and not heat energy or something else)
variable = pp
# The following specfies that the total fluid mass coming out of
# the porespace via this sink in this timestep should be recorded
# in the pls_total_outflow_mass UserObject
SumQuantityUO = pls_total_outflow_mass
# The following file defines the polyline geometry
# which is just two points in this particular example
point_file = pls02.bh
# Now define the piecewise-linear function, L
# First, we want L to be a function of porepressure (and not
# temperature or something else). The following means that
# p_or_t_vals should be intepreted by MOOSE as the zeroth-phase
# porepressure
function_of = pressure
fluid_phase = 0
# Second, define the piecewise-linear function, L
# The following means
# flux=0 when pp=0 (and also pp<0)
# flux=1 when pp=1E7 (and also pp>1E7)
# flux=linearly intepolated between pp=0 and pp=1E7
# When flux>0 this means a sink, while flux<0 means a source
p_or_t_vals = '0 1E7'
fluxes = '0 1'
# Finally, in this case we want to always multiply
# L by the fluid mobility (of the zeroth phase) and
# use that in the sink strength instead of the bare L
# computed above
use_mobility = true
[]
[]
[Postprocessors]
[pls_report]
type = PorousFlowPlotQuantity
uo = pls_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
indirect_dependencies = 'fluid_mass1 fluid_mass0 pls_report'
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 pls_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 1
dt = 1
solve_type = NEWTON
[]
[Outputs]
file_base = pls02
exodus = false
csv = true
execute_on = timestep_end
[]
(modules/porous_flow/test/tests/dirackernels/bh_except02.i)
# PorousFlowPeacemanBorehole exception test
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = TimeDerivative
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-12 0 0 0 1E-12 0 0 0 1E-12'
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
bottom_p_or_t = 0
fluid_phase = 0
mass_fraction_component = 1
point_file = bh02.bh
SumQuantityUO = borehole_total_outflow_mass
variable = pp
unit_weight = '0 0 0'
character = 1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 0.5
dt = 1E-2
solve_type = NEWTON
[]
(modules/porous_flow/test/tests/mass_conservation/mass07.i)
# Checking that the mass postprocessor throws the correct error if
# too many phases are supplied
[Mesh]
type = GeneratedMesh
dim = 1
nx = 10
xmin = 0
xmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
[]
[sat]
[]
[]
[AuxVariables]
[massfrac_ph0_sp0]
initial_condition = 1
[]
[massfrac_ph1_sp0]
initial_condition = 0
[]
[]
[ICs]
[pinit]
type = ConstantIC
value = 1
variable = pp
[]
[satinit]
type = FunctionIC
function = 1-x
variable = sat
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = sat
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp sat'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1
[]
[]
[FluidProperties]
[simple_fluid0]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 1
thermal_expansion = 0
[]
[simple_fluid1]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 0.1
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow2PhasePS
phase0_porepressure = pp
phase1_saturation = sat
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
mass_fraction_vars = 'massfrac_ph0_sp0 massfrac_ph1_sp0'
[]
[simple_fluid0]
type = PorousFlowSingleComponentFluid
fp = simple_fluid0
phase = 0
[]
[simple_fluid1]
type = PorousFlowSingleComponentFluid
fp = simple_fluid1
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[Postprocessors]
[comp1_total_mass]
type = PorousFlowFluidMass
fluid_component = 1
phase = '0 1 2'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
dt = 1
end_time = 1
[]
(modules/porous_flow/test/tests/dirackernels/bh_except04.i)
# PorousFlowPeacemanBorehole exception test
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = TimeDerivative
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
at_nodes = true # Needed to force exepected error
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-12 0 0 0 1E-12 0 0 0 1E-12'
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
bottom_p_or_t = 0
fluid_phase = 0
function_of = temperature
point_file = bh02.bh
SumQuantityUO = borehole_total_outflow_mass
variable = pp
unit_weight = '0 0 0'
character = 1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 0.5
dt = 1E-2
solve_type = NEWTON
[]
(modules/porous_flow/test/tests/fluidstate/water_vapor_tab.i)
# Tests correct calculation of properties in PorousFlowWaterVapor in the two-phase region
[Mesh]
type = GeneratedMesh
dim = 2
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pliq]
initial_condition = 1e6
[]
[h]
initial_condition = 8e5
scaling = 1e-3
[]
[]
[AuxVariables]
[pressure_gas]
order = CONSTANT
family = MONOMIAL
[]
[pressure_water]
order = CONSTANT
family = MONOMIAL
[]
[enthalpy_gas]
order = CONSTANT
family = MONOMIAL
[]
[enthalpy_water]
order = CONSTANT
family = MONOMIAL
[]
[saturation_gas]
order = CONSTANT
family = MONOMIAL
[]
[saturation_water]
order = CONSTANT
family = MONOMIAL
[]
[density_water]
order = CONSTANT
family = MONOMIAL
[]
[density_gas]
order = CONSTANT
family = MONOMIAL
[]
[viscosity_water]
order = CONSTANT
family = MONOMIAL
[]
[viscosity_gas]
order = CONSTANT
family = MONOMIAL
[]
[temperature]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[enthalpy_water]
type = PorousFlowPropertyAux
variable = enthalpy_water
property = enthalpy
phase = 0
execute_on = 'initial timestep_end'
[]
[enthalpy_gas]
type = PorousFlowPropertyAux
variable = enthalpy_gas
property = enthalpy
phase = 1
execute_on = 'initial timestep_end'
[]
[pressure_water]
type = PorousFlowPropertyAux
variable = pressure_water
property = pressure
phase = 0
execute_on = 'initial timestep_end'
[]
[pressure_gas]
type = PorousFlowPropertyAux
variable = pressure_gas
property = pressure
phase = 1
execute_on = 'initial timestep_end'
[]
[saturation_water]
type = PorousFlowPropertyAux
variable = saturation_water
property = saturation
phase = 0
execute_on = 'initial timestep_end'
[]
[saturation_gas]
type = PorousFlowPropertyAux
variable = saturation_gas
property = saturation
phase = 1
execute_on = 'initial timestep_end'
[]
[density_water]
type = PorousFlowPropertyAux
variable = density_water
property = density
phase = 0
execute_on = 'initial timestep_end'
[]
[density_gas]
type = PorousFlowPropertyAux
variable = density_gas
property = density
phase = 1
execute_on = 'initial timestep_end'
[]
[viscosity_water]
type = PorousFlowPropertyAux
variable = viscosity_water
property = viscosity
phase = 0
execute_on = 'initial timestep_end'
[]
[viscosity_gas]
type = PorousFlowPropertyAux
variable = viscosity_gas
property = viscosity
phase = 1
execute_on = 'initial timestep_end'
[]
[temperature]
type = PorousFlowPropertyAux
variable = temperature
property = temperature
execute_on = 'initial timestep_end'
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pliq h'
number_fluid_phases = 2
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureBC
pe = 1e5
lambda = 2
pc_max = 1e6
[]
[fs]
type = PorousFlowWaterVapor
water_fp = water
capillary_pressure = pc
[]
[]
[FluidProperties]
[water_true]
type = Water97FluidProperties
[]
[water]
type = TabulatedBicubicFluidProperties
fp = water_true
allow_fp_and_tabulation = true
fluid_property_file = fluid_properties_extended.csv
[]
[]
[Materials]
[watervapor]
type = PorousFlowFluidStateSingleComponent
porepressure = pliq
enthalpy = h
temperature_unit = Kelvin
capillary_pressure = pc
fluid_state = fs
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-13 0 0 0 1e-13 0 0 0 1e-13'
[]
[relperm0]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[relperm1]
type = PorousFlowRelativePermeabilityCorey
n = 3
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[internal_energy]
type = PorousFlowMatrixInternalEnergy
density = 2500
specific_heat_capacity = 1200
[]
[]
[Problem]
solve = false
[]
[Executioner]
type = Steady
[]
[Preconditioning]
[smp]
type = SMP
full = true
[]
[]
[Postprocessors]
[density_water]
type = ElementAverageValue
variable = density_water
execute_on = 'initial timestep_end'
[]
[density_gas]
type = ElementAverageValue
variable = density_gas
execute_on = 'initial timestep_end'
[]
[viscosity_water]
type = ElementAverageValue
variable = viscosity_water
execute_on = 'initial timestep_end'
[]
[viscosity_gas]
type = ElementAverageValue
variable = viscosity_gas
execute_on = 'initial timestep_end'
[]
[enthalpy_water]
type = ElementAverageValue
variable = enthalpy_water
execute_on = 'initial timestep_end'
[]
[enthalpy_gas]
type = ElementAverageValue
variable = enthalpy_gas
execute_on = 'initial timestep_end'
[]
[sg]
type = ElementAverageValue
variable = saturation_gas
execute_on = 'initial timestep_end'
[]
[sw]
type = ElementAverageValue
variable = saturation_water
execute_on = 'initial timestep_end'
[]
[pwater]
type = ElementAverageValue
variable = pressure_water
execute_on = 'initial timestep_end'
[]
[pgas]
type = ElementAverageValue
variable = pressure_gas
execute_on = 'initial timestep_end'
[]
[temperature]
type = ElementAverageValue
variable = temperature
execute_on = 'initial timestep_end'
[]
[enthalpy]
type = ElementAverageValue
variable = h
execute_on = 'initial timestep_end'
[]
[liquid_mass]
type = PorousFlowFluidMass
phase = 0
execute_on = 'initial timestep_end'
[]
[vapor_mass]
type = PorousFlowFluidMass
phase = 1
execute_on = 'initial timestep_end'
[]
[]
[Outputs]
file_base = water_vapor_twophase_tab
csv = true
execute_on = INITIAL
[]
(modules/porous_flow/test/tests/dirackernels/bh_except09.i)
# PorousFlowPeacemanBorehole exception test
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = TimeDerivative
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
compute_enthalpy = false
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
bottom_p_or_t = 0
fluid_phase = 0
point_file = bh02.bh
use_mobility = true
use_enthalpy = true
SumQuantityUO = borehole_total_outflow_mass
variable = pp
unit_weight = '0 0 0'
character = 1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 0.5
dt = 1E-2
solve_type = NEWTON
[]
(modules/porous_flow/test/tests/fluidstate/theis_nonisothermal.i)
# Two-phase nonisothermal Theis problem: Flow from single source using WaterNCG fluidstate.
# Constant rate injection 2 kg/s of cold gas into warm reservoir
# 1D cylindrical mesh
# Initially, system has only a liquid phase, until enough gas is injected
# to form a gas phase, in which case the system becomes two phase.
[Mesh]
[mesh]
type = GeneratedMeshGenerator
dim = 1
nx = 40
xmin = 0.1
xmax = 200
bias_x = 1.05
[]
coord_type = RZ
rz_coord_axis = Y
[]
[GlobalParams]
PorousFlowDictator = dictator
gravity = '0 0 0'
[]
[AuxVariables]
[saturation_gas]
order = CONSTANT
family = MONOMIAL
[]
[x1]
order = CONSTANT
family = MONOMIAL
[]
[y0]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[saturation_gas]
type = PorousFlowPropertyAux
variable = saturation_gas
property = saturation
phase = 1
execute_on = timestep_end
[]
[x1]
type = PorousFlowPropertyAux
variable = x1
property = mass_fraction
phase = 0
fluid_component = 1
execute_on = timestep_end
[]
[y0]
type = PorousFlowPropertyAux
variable = y0
property = mass_fraction
phase = 1
fluid_component = 0
execute_on = timestep_end
[]
[]
[Variables]
[pgas]
initial_condition = 20e6
[]
[zi]
initial_condition = 0
[]
[temperature]
initial_condition = 70
scaling = 1e-4
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pgas
[]
[flux0]
type = PorousFlowAdvectiveFlux
fluid_component = 0
variable = pgas
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = zi
[]
[flux1]
type = PorousFlowAdvectiveFlux
fluid_component = 1
variable = zi
[]
[energy]
type = PorousFlowEnergyTimeDerivative
variable = temperature
[]
[heatadv]
type = PorousFlowHeatAdvection
variable = temperature
[]
[conduction]
type = PorousFlowHeatConduction
variable = temperature
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pgas zi temperature'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureConst
pc = 0
[]
[fs]
type = PorousFlowWaterNCG
water_fp = water
gas_fp = methane
capillary_pressure = pc
[]
[]
[FluidProperties]
[methane]
type = MethaneFluidProperties
[]
[water]
type = Water97FluidProperties
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
temperature = temperature
[]
[waterncg]
type = PorousFlowFluidState
gas_porepressure = pgas
z = zi
temperature = temperature
temperature_unit = Celsius
capillary_pressure = pc
fluid_state = fs
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.2
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-12 0 0 0 1e-12 0 0 0 1e-12'
[]
[relperm_water]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
s_res = 0.1
sum_s_res = 0.1
[]
[relperm_gas]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 1
[]
[rockheat]
type = PorousFlowMatrixInternalEnergy
specific_heat_capacity = 1000
density = 2500
[]
[rock_thermal_conductivity]
type = PorousFlowThermalConductivityIdeal
dry_thermal_conductivity = '50 0 0 0 50 0 0 0 50'
[]
[]
[BCs]
[cold_gas]
type = DirichletBC
boundary = left
variable = temperature
value = 20
[]
[gas_injecton]
type = PorousFlowSink
boundary = left
variable = zi
flux_function = -0.159155
[]
[rightwater]
type = DirichletBC
boundary = right
value = 20e6
variable = pgas
[]
[righttemp]
type = DirichletBC
boundary = right
value = 70
variable = temperature
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -sub_pc_type -sub_pc_factor_shift_type -pc_asm_overlap'
petsc_options_value = 'gmres asm lu NONZERO 2'
[]
[]
[Executioner]
type = Transient
solve_type = NEWTON
end_time = 1e4
nl_abs_tol = 1e-7
nl_rel_tol = 1e-5
[TimeStepper]
type = IterationAdaptiveDT
dt = 1
growth_factor = 1.5
[]
[]
[Postprocessors]
[pgas]
type = PointValue
point = '2 0 0'
variable = pgas
[]
[sgas]
type = PointValue
point = '2 0 0'
variable = saturation_gas
[]
[zi]
type = PointValue
point = '2 0 0'
variable = zi
[]
[temperature]
type = PointValue
point = '2 0 0'
variable = temperature
[]
[massgas]
type = PorousFlowFluidMass
fluid_component = 1
[]
[x1]
type = PointValue
point = '2 0 0'
variable = x1
[]
[y0]
type = PointValue
point = '2 0 0'
variable = y0
[]
[]
[Outputs]
print_linear_residuals = false
perf_graph = true
csv = true
[]
(modules/porous_flow/test/tests/energy_conservation/heat04_action.i)
# heat04, but using an action
#
# The sample is a single unit element, with fixed displacements on
# all sides. A heat source of strength S (J/m^3/s) is applied into
# the element. There is no fluid flow or heat flow. The rise
# in temperature, porepressure and stress, and the change in porosity is
# matched with theory.
#
# In this case, fluid mass must be conserved, and there is no
# volumetric strain, so
# porosity * fluid_density = constant
# Also, the energy-density in the rock-fluid system increases with S:
# d/dt [(1 - porosity) * rock_density * rock_heat_cap * T + porosity * fluid_density * fluid_heat_cap * T] = S
# Also, the porosity evolves according to THM as
# porosity = biot + (porosity0 - biot) * exp( (biot - 1) * P / fluid_bulk + rock_thermal_exp * T)
# Finally, the effective stress must be exactly zero (as there is
# no strain).
#
# Let us assume that
# fluid_density = dens0 * exp(P / fluid_bulk - fluid_thermal_exp * T)
# Then the conservation of fluid mass means
# porosity = por0 * exp(- P / fluid_bulk + fluid_thermal_exp * T)
# where dens0 * por0 = the initial fluid mass.
# The last expression for porosity, combined with the THM one,
# and assuming that biot = 1 for simplicity, gives
# porosity = 1 + (porosity0 - 1) * exp(rock_thermal_exp * T) = por0 * exp(- P / fluid_bulk + fluid_thermal_exp * T) .... (A)
#
# This stuff may be substituted into the heat energy-density equation:
# S = d/dt [(1 - porosity0) * exp(rock_thermal_exp * T) * rock_density * rock_heat_cap * T + porosity * fluid_density * fluid_heat_cap * T]
#
# If S is constant then
# S * t = (1 - porosity0) * exp(rock_thermal_exp * T) * rock_density * rock_heat_cap * T + porosity * fluid_density * fluid_heat_cap * T
# with T(t=0) = 0 then Eqn(A) implies that por0 = porosity0 and
# P / fluid_bulk = fluid_thermal_exp * T - log(1 + (por0 - 1) * exp(rock_thermal_exp * T)) + log(por0)
#
# Parameters:
# A = 2
# fluid_bulk = 2.0
# dens0 = 3.0
# fluid_thermal_exp = 0.5
# fluid_heat_cap = 2
# por0 = 0.5
# rock_thermal_exp = 0.25
# rock_density = 5
# rock_heat_capacity = 0.2
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -0.5
xmax = 0.5
ymin = -0.5
ymax = 0.5
zmin = -0.5
zmax = 0.5
[]
[FluidProperties]
[the_simple_fluid]
type = SimpleFluidProperties
thermal_expansion = 0.5
cv = 2
cp = 2
bulk_modulus = 2.0
density0 = 3.0
[]
[]
[PorousFlowUnsaturated]
coupling_type = ThermoHydroMechanical
displacements = 'disp_x disp_y disp_z'
porepressure = pp
temperature = temp
dictator_name = Sir
biot_coefficient = 1.0
gravity = '0 0 0'
fp = the_simple_fluid
van_genuchten_alpha = 1.0E-12
van_genuchten_m = 0.5
relative_permeability_type = Corey
relative_permeability_exponent = 0.0
[]
[GlobalParams]
displacements = 'disp_x disp_y disp_z'
PorousFlowDictator = Sir
block = 0
[]
[Variables]
[disp_x]
[]
[disp_y]
[]
[disp_z]
[]
[pp]
[]
[temp]
[]
[]
[BCs]
[confinex]
type = DirichletBC
variable = disp_x
value = 0
boundary = 'left right'
[]
[confiney]
type = DirichletBC
variable = disp_y
value = 0
boundary = 'bottom top'
[]
[confinez]
type = DirichletBC
variable = disp_z
value = 0
boundary = 'back front'
[]
[]
[Kernels]
[heat_source]
type = BodyForce
function = 1
variable = temp
[]
[]
[Functions]
[err_T_fcn]
type = ParsedFunction
symbol_names = 'por0 rte temp rd rhc m0 fhc source'
symbol_values = '0.5 0.25 t0 5 0.2 1.5 2 1'
expression = '((1-por0)*exp(rte*temp)*rd*rhc*temp+m0*fhc*temp-source*t)/(source*t)'
[]
[err_pp_fcn]
type = ParsedFunction
symbol_names = 'por0 rte temp rd rhc m0 fhc source bulk pp fte'
symbol_values = '0.5 0.25 t0 5 0.2 1.5 2 1 2 p0 0.5'
expression = '(bulk*(fte*temp-log(1+(por0-1)*exp(rte*temp))+log(por0))-pp)/pp'
[]
[]
[AuxVariables]
[porosity]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[porosity]
type = PorousFlowPropertyAux
property = porosity
variable = porosity
[]
[]
[Materials]
[elasticity_tensor]
type = ComputeElasticityTensor
C_ijkl = '1 1.5'
# bulk modulus is lambda + 2*mu/3 = 1 + 2*1.5/3 = 2
fill_method = symmetric_isotropic
[]
[strain]
type = ComputeSmallStrain
[]
[stress]
type = ComputeLinearElasticStress
[]
[porosity]
type = PorousFlowPorosity
thermal = true
fluid = true
mechanical = true
ensure_positive = false
biot_coefficient = 1.0
porosity_zero = 0.5
thermal_expansion_coeff = 0.25
solid_bulk = 2
[]
[rock_heat]
type = PorousFlowMatrixInternalEnergy
specific_heat_capacity = 0.2
density = 5.0
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '0 0 0 0 0 0 0 0 0'
[]
[thermal_conductivity]
type = PorousFlowThermalConductivityIdeal
dry_thermal_conductivity = '0 0 0 0 0 0 0 0 0'
[]
[]
[Postprocessors]
[p0]
type = PointValue
outputs = 'console csv'
execute_on = 'timestep_end'
point = '0 0 0'
variable = pp
[]
[t0]
type = PointValue
outputs = 'console csv'
execute_on = 'timestep_end'
point = '0 0 0'
variable = temp
[]
[porosity]
type = PointValue
outputs = 'console csv'
execute_on = 'timestep_end'
point = '0 0 0'
variable = porosity
[]
[stress_xx]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_xx
[]
[stress_yy]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_yy
[]
[stress_zz]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_zz
[]
[fluid_mass]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'timestep_end'
outputs = 'console csv'
[]
[total_heat]
type = PorousFlowHeatEnergy
phase = 0
execute_on = 'timestep_end'
outputs = 'console csv'
[]
[err_T]
type = FunctionValuePostprocessor
function = err_T_fcn
[]
[err_P]
type = FunctionValuePostprocessor
function = err_pp_fcn
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_rtol -snes_max_it'
petsc_options_value = 'bcgs bjacobi 1E-12 10000'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
dt = 1
end_time = 5
[]
[Outputs]
execute_on = 'initial timestep_end'
file_base = heat04_action
csv = true
[]
(modules/porous_flow/test/tests/energy_conservation/heat04_action_KT.i)
# heat04, but using an action with KT stabilization.
# See heat04.i for a full discussion of the results.
# The KT stabilization should have no impact as there is no flow, but this input file checks that MOOSE runs.
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -0.5
xmax = 0.5
ymin = -0.5
ymax = 0.5
zmin = -0.5
zmax = 0.5
[]
[FluidProperties]
[the_simple_fluid]
type = SimpleFluidProperties
thermal_expansion = 0.5
cv = 2
cp = 2
bulk_modulus = 2.0
density0 = 3.0
[]
[]
[PorousFlowUnsaturated]
coupling_type = ThermoHydroMechanical
displacements = 'disp_x disp_y disp_z'
porepressure = pp
temperature = temp
dictator_name = Sir
biot_coefficient = 1.0
gravity = '0 0 0'
fp = the_simple_fluid
van_genuchten_alpha = 1.0E-12
van_genuchten_m = 0.5
relative_permeability_type = Corey
relative_permeability_exponent = 0.0
stabilization = KT
flux_limiter_type = superbee
[]
[GlobalParams]
displacements = 'disp_x disp_y disp_z'
PorousFlowDictator = Sir
block = 0
[]
[Variables]
[disp_x]
[]
[disp_y]
[]
[disp_z]
[]
[pp]
[]
[temp]
[]
[]
[BCs]
[confinex]
type = DirichletBC
variable = disp_x
value = 0
boundary = 'left right'
[]
[confiney]
type = DirichletBC
variable = disp_y
value = 0
boundary = 'bottom top'
[]
[confinez]
type = DirichletBC
variable = disp_z
value = 0
boundary = 'back front'
[]
[]
[Kernels]
[heat_source]
type = BodyForce
function = 1
variable = temp
[]
[]
[Functions]
[err_T_fcn]
type = ParsedFunction
symbol_names = 'por0 rte temp rd rhc m0 fhc source'
symbol_values = '0.5 0.25 t0 5 0.2 1.5 2 1'
expression = '((1-por0)*exp(rte*temp)*rd*rhc*temp+m0*fhc*temp-source*t)/(source*t)'
[]
[err_pp_fcn]
type = ParsedFunction
symbol_names = 'por0 rte temp rd rhc m0 fhc source bulk pp fte'
symbol_values = '0.5 0.25 t0 5 0.2 1.5 2 1 2 p0 0.5'
expression = '(bulk*(fte*temp-log(1+(por0-1)*exp(rte*temp))+log(por0))-pp)/pp'
[]
[]
[AuxVariables]
[porosity]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[porosity]
type = PorousFlowPropertyAux
property = porosity
variable = porosity
[]
[]
[Materials]
[elasticity_tensor]
type = ComputeElasticityTensor
C_ijkl = '1 1.5'
# bulk modulus is lambda + 2*mu/3 = 1 + 2*1.5/3 = 2
fill_method = symmetric_isotropic
[]
[strain]
type = ComputeSmallStrain
[]
[stress]
type = ComputeLinearElasticStress
[]
[porosity]
type = PorousFlowPorosity
thermal = true
fluid = true
mechanical = true
ensure_positive = false
biot_coefficient = 1.0
porosity_zero = 0.5
thermal_expansion_coeff = 0.25
solid_bulk = 2
[]
[rock_heat]
type = PorousFlowMatrixInternalEnergy
specific_heat_capacity = 0.2
density = 5.0
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '0 0 0 0 0 0 0 0 0'
[]
[thermal_conductivity]
type = PorousFlowThermalConductivityIdeal
dry_thermal_conductivity = '0 0 0 0 0 0 0 0 0'
[]
[]
[Postprocessors]
[p0]
type = PointValue
outputs = 'console csv'
execute_on = 'timestep_end'
point = '0 0 0'
variable = pp
[]
[t0]
type = PointValue
outputs = 'console csv'
execute_on = 'timestep_end'
point = '0 0 0'
variable = temp
[]
[porosity]
type = PointValue
outputs = 'console csv'
execute_on = 'timestep_end'
point = '0 0 0'
variable = porosity
[]
[stress_xx]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_xx
[]
[stress_yy]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_yy
[]
[stress_zz]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_zz
[]
[fluid_mass]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'timestep_end'
outputs = 'console csv'
[]
[total_heat]
type = PorousFlowHeatEnergy
phase = 0
execute_on = 'timestep_end'
outputs = 'console csv'
[]
[err_T]
type = FunctionValuePostprocessor
function = err_T_fcn
[]
[err_P]
type = FunctionValuePostprocessor
function = err_pp_fcn
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_rtol -snes_max_it'
petsc_options_value = 'bcgs bjacobi 1E-12 10000'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
dt = 1
end_time = 5
[]
[Outputs]
execute_on = 'initial timestep_end'
file_base = heat04_action
csv = true
[]
(modules/porous_flow/test/tests/dirackernels/bh_except13.i)
# PorousFlowPeacemanBorehole exception test
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = TimeDerivative
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-12 0 0 0 1E-12 0 0 0 1E-12'
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
bottom_p_or_t = 0
fluid_phase = 0
point_file = coincident_points.bh
SumQuantityUO = borehole_total_outflow_mass
variable = pp
unit_weight = '0 0 0'
character = 1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 0.5
dt = 1E-2
solve_type = NEWTON
[]
(modules/porous_flow/test/tests/heterogeneous_materials/constant_poroperm3.i)
# Assign porosity and permeability variables from constant AuxVariables read from the mesh
# to create a heterogeneous model
[Mesh]
type = FileMesh
file = 'gold/constant_poroperm2_out.e'
[]
[GlobalParams]
PorousFlowDictator = dictator
gravity = '0 0 -10'
[]
[Problem]
allow_initial_conditions_with_restart = true
[]
[Variables]
[ppwater]
initial_condition = 1e6
[]
[]
[AuxVariables]
[poro]
family = MONOMIAL
order = CONSTANT
initial_from_file_var = poro
[]
[permxx]
family = MONOMIAL
order = CONSTANT
initial_from_file_var = permxx
[]
[permxy]
family = MONOMIAL
order = CONSTANT
initial_from_file_var = permxy
[]
[permxz]
family = MONOMIAL
order = CONSTANT
initial_from_file_var = permxz
[]
[permyx]
family = MONOMIAL
order = CONSTANT
initial_from_file_var = permyx
[]
[permyy]
family = MONOMIAL
order = CONSTANT
initial_from_file_var = permyy
[]
[permyz]
family = MONOMIAL
order = CONSTANT
initial_from_file_var = permyz
[]
[permzx]
family = MONOMIAL
order = CONSTANT
initial_from_file_var = permzx
[]
[permzy]
family = MONOMIAL
order = CONSTANT
initial_from_file_var = permzy
[]
[permzz]
family = MONOMIAL
order = CONSTANT
initial_from_file_var = permzz
[]
[poromat]
family = MONOMIAL
order = CONSTANT
[]
[permxxmat]
family = MONOMIAL
order = CONSTANT
[]
[permxymat]
family = MONOMIAL
order = CONSTANT
[]
[permxzmat]
family = MONOMIAL
order = CONSTANT
[]
[permyxmat]
family = MONOMIAL
order = CONSTANT
[]
[permyymat]
family = MONOMIAL
order = CONSTANT
[]
[permyzmat]
family = MONOMIAL
order = CONSTANT
[]
[permzxmat]
family = MONOMIAL
order = CONSTANT
[]
[permzymat]
family = MONOMIAL
order = CONSTANT
[]
[permzzmat]
family = MONOMIAL
order = CONSTANT
[]
[]
[AuxKernels]
[poromat]
type = PorousFlowPropertyAux
property = porosity
variable = poromat
[]
[permxxmat]
type = PorousFlowPropertyAux
property = permeability
variable = permxxmat
column = 0
row = 0
[]
[permxymat]
type = PorousFlowPropertyAux
property = permeability
variable = permxymat
column = 1
row = 0
[]
[permxzmat]
type = PorousFlowPropertyAux
property = permeability
variable = permxzmat
column = 2
row = 0
[]
[permyxmat]
type = PorousFlowPropertyAux
property = permeability
variable = permyxmat
column = 0
row = 1
[]
[permyymat]
type = PorousFlowPropertyAux
property = permeability
variable = permyymat
column = 1
row = 1
[]
[permyzmat]
type = PorousFlowPropertyAux
property = permeability
variable = permyzmat
column = 2
row = 1
[]
[permzxmat]
type = PorousFlowPropertyAux
property = permeability
variable = permzxmat
column = 0
row = 2
[]
[permzymat]
type = PorousFlowPropertyAux
property = permeability
variable = permzymat
column = 1
row = 2
[]
[permzzmat]
type = PorousFlowPropertyAux
property = permeability
variable = permzzmat
column = 2
row = 2
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
variable = ppwater
[]
[flux0]
type = PorousFlowAdvectiveFlux
variable = ppwater
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'ppwater'
number_fluid_phases = 1
number_fluid_components = 1
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
density0 = 1000
viscosity = 1e-3
thermal_expansion = 0
cv = 2
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseFullySaturated
porepressure = ppwater
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = poro
[]
[permeability]
type = PorousFlowPermeabilityConstFromVar
perm_xx = permxx
perm_xy = permxy
perm_xz = permxz
perm_yx = permyx
perm_yy = permyy
perm_yz = permyz
perm_zx = permzx
perm_zy = permzy
perm_zz = permzz
[]
[relperm_water]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[]
[Postprocessors]
[mass_ph0]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol'
petsc_options_value = 'bcgs bjacobi 1E-12 1E-10'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
end_time = 100
dt = 100
[]
[Outputs]
execute_on = 'initial timestep_end'
exodus = true
perf_graph = true
file_base = constant_poroperm2_out
[]
(modules/porous_flow/test/tests/mass_conservation/mass13.i)
# The sample is an annulus in RZ coordinates.
# Roller BCs are applied to the rmin, top and bottom boundaries
# A constant displacement is applied to the outer boundary: disp_r = -0.01 * t * (r - rmin)/(rmax - rmin).
# There is no fluid flow.
# Fluid mass conservation is checked.
#
# The flag volumetric_locking_correction = true is set for the strain calculator,
# which ensures that the volumetric strain is uniform throughout the element
#
# Theoretically,
# volumetric_strain = volume / volume0 - 1 = ((rmax - 0.01*t)^2 - rmin^2) / (rmax^2 - rmin^2) - 1
# However, with ComputeAxisymmetricRZSmallStrain, strain_rr = -0.01 * t / (rmax - rmin)
# and strain_tt = disp_r / r = -0.01 * t * (1 - rmin / r_qp) / (rmax - rmin), where r_qp is the radius of the quadpoint
# With volumetric_locking_correction = true, r_qp = (rmax - rmin) / 2.
# The volumetric strain is
# epv = -0.01 * t * (2 - rmin / r_qp) / (rmax - rmin)
# and volume = volume0 * (1 + epv)
#
# Fluid conservation reads
# volume0 * rho0 * exp(P0/bulk) = volume * rho0 * exp(P/bulk), so
# P - P0 = bulk * log(volume0 / volume) = 0.5 * log(1 / (1 + epv))
# With rmax = 2 and rmin = 1
# fluid_mass = volume0 * rho0 * exp(P0/bulk) = pi*3 * 1 * exp(0.1/0.5) = 11.51145
[Mesh]
type = GeneratedMesh
dim = 2
nx = 1
ny = 1
xmin = 1
xmax = 2
ymin = -0.5
ymax = 0.5
coord_type = RZ
[]
[GlobalParams]
displacements = 'disp_r disp_z'
PorousFlowDictator = dictator
block = 0
biot_coefficient = 0.3
[]
[Variables]
[disp_r]
[]
[disp_z]
[]
[porepressure]
initial_condition = 0.1
[]
[]
[BCs]
[plane_strain]
type = DirichletBC
variable = disp_z
value = 0
boundary = 'bottom top'
[]
[rmin_fixed]
type = DirichletBC
variable = disp_r
value = 0
boundary = left
[]
[contract]
type = FunctionDirichletBC
variable = disp_r
function = -0.01*t
boundary = right
[]
[]
[Kernels]
[grad_stress_r]
type = StressDivergenceRZTensors
variable = disp_r
component = 0
[]
[grad_stress_z]
type = StressDivergenceRZTensors
variable = disp_z
component = 1
[]
[poro_r]
type = PorousFlowEffectiveStressCoupling
variable = disp_r
component = 0
[]
[poro_z]
type = PorousFlowEffectiveStressCoupling
variable = disp_z
component = 1
[]
[poro_vol_exp]
type = PorousFlowMassVolumetricExpansion
variable = porepressure
fluid_component = 0
[]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = porepressure
[]
[]
[AuxVariables]
[stress_rr]
order = CONSTANT
family = MONOMIAL
[]
[stress_rz]
order = CONSTANT
family = MONOMIAL
[]
[stress_zz]
order = CONSTANT
family = MONOMIAL
[]
[stress_tt]
order = CONSTANT
family = MONOMIAL
[]
[strain_rr]
order = CONSTANT
family = MONOMIAL
[]
[strain_zz]
order = CONSTANT
family = MONOMIAL
[]
[strain_tt]
order = CONSTANT
family = MONOMIAL
[]
[vol_strain]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[stress_rr]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_rr
index_i = 0
index_j = 0
[]
[stress_rz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_rz
index_i = 0
index_j = 1
[]
[stress_zz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_zz
index_i = 1
index_j = 1
[]
[stress_tt]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_tt
index_i = 2
index_j = 2
[]
[strain_rr]
type = RankTwoAux
rank_two_tensor = total_strain
variable = strain_rr
index_i = 0
index_j = 0
[]
[strain_zz]
type = RankTwoAux
rank_two_tensor = total_strain
variable = strain_zz
index_i = 1
index_j = 1
[]
[strain_tt]
type = RankTwoAux
rank_two_tensor = total_strain
variable = strain_tt
index_i = 2
index_j = 2
[]
[vol_strain]
type = MaterialRealAux
property = PorousFlow_total_volumetric_strain_qp
variable = vol_strain
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 0.5
density0 = 1
thermal_expansion = 0
viscosity = 1
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[elasticity_tensor]
type = ComputeElasticityTensor
C_ijkl = '1 1.5'
# bulk modulus is lambda + 2*mu/3 = 1 + 2*1.5/3 = 2
fill_method = symmetric_isotropic
[]
[strain]
type = ComputeAxisymmetricRZSmallStrain
volumetric_locking_correction = true # the strain will be the same at every qp of the element
[]
[stress]
type = ComputeLinearElasticStress
[]
[vol_strain]
type = PorousFlowVolumetricStrain
[]
[eff_fluid_pressure]
type = PorousFlowEffectiveFluidPressure
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = porepressure
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '0.5 0 0 0 0.5 0 0 0 0.5'
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'porepressure disp_r disp_z'
number_fluid_phases = 1
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1
[]
[]
[Postprocessors]
[p0]
type = PointValue
outputs = 'console csv'
execute_on = 'initial timestep_end'
point = '1.0 0 0'
variable = porepressure
[]
[vol_strain]
type = PointValue
outputs = 'console csv'
execute_on = 'initial timestep_end'
point = '1 0 0'
variable = vol_strain
[]
[strain_rr]
type = PointValue
outputs = 'console csv'
execute_on = 'initial timestep_end'
point = '1 0 0'
variable = strain_rr
[]
[strain_zz]
type = PointValue
outputs = 'console csv'
execute_on = 'initial timestep_end'
point = '1 0 0'
variable = strain_zz
[]
[strain_tt]
type = PointValue
outputs = 'console csv'
execute_on = 'initial timestep_end'
point = '1 0 0'
variable = strain_tt
[]
[rdisp]
type = PointValue
outputs = csv
point = '2 0 0'
use_displaced_mesh = false
variable = disp_r
[]
[stress_rr]
type = PointValue
outputs = csv
point = '1 0 0'
variable = stress_rr
[]
[stress_zz]
type = PointValue
outputs = csv
point = '1 0 0'
variable = stress_zz
[]
[stress_tt]
type = PointValue
outputs = csv
point = '1 0 0'
variable = stress_tt
[]
[fluid_mass]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
outputs = 'console csv'
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it'
petsc_options_value = 'bcgs bjacobi 1E-14 1E-8 10000'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
start_time = 0
end_time = 10
dt = 2
[]
[Outputs]
execute_on = 'initial timestep_end'
[csv]
type = CSV
[]
[]
(modules/porous_flow/test/tests/dirackernels/frompps.i)
# Test PorousFlowPointSourceFromPostprocessor DiracKernel
[Mesh]
type = GeneratedMesh
dim = 2
bias_x = 1.1
bias_y = 1.1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Functions]
[mass_flux_fn]
type = PiecewiseConstant
direction = left
xy_data = '
0 0
100 -0.1
300 0
600 -0.1
1400 0
1500 0.2
2000 0.2'
[]
[]
[Variables]
[pp]
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = pp
number_fluid_phases = 1
number_fluid_components = 1
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseFullySaturated
porepressure = pp
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.2
[]
[]
[Postprocessors]
[total_mass]
type = PorousFlowFluidMass
execute_on = 'initial timestep_end'
[]
[mass_flux_in]
type = FunctionValuePostprocessor
function = mass_flux_fn
execute_on = 'initial timestep_begin'
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
[]
[]
[Executioner]
type = Transient
solve_type = Newton
nl_abs_tol = 1e-14
dt = 100
end_time = 2000
[]
[Outputs]
perf_graph = true
csv = true
execute_on = 'initial timestep_end'
file_base = frompps
[]
[ICs]
[PressureIC]
variable = pp
type = ConstantIC
value = 20e6
[]
[]
[DiracKernels]
[source]
type = PorousFlowPointSourceFromPostprocessor
variable = pp
mass_flux = mass_flux_in
point = '0.5 0.5 0'
[]
[]
(modules/porous_flow/test/tests/mass_conservation/mass15.i)
# Checking that the mass postprocessor correctly throws a paramError when an incorrect
# strain base_name is given
[Mesh]
[mesh]
type = GeneratedMeshGenerator
dim = 1
nx = 3
xmin = -1
xmax = 1
[]
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
[]
[]
[ICs]
[pinit]
type = FunctionIC
function = x
variable = pp
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 1
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[Postprocessors]
[total_mass]
type = PorousFlowFluidMass
base_name = incorrect_base_name
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
[]
[]
[Executioner]
type = Transient
solve_type = Newton
dt = 1
end_time = 1
[]
[Outputs]
execute_on = 'timestep_end'
[]
(modules/porous_flow/test/tests/mass_conservation/mass10.i)
# Checking that the mass postprocessor throws the correct error when kernel_variable_numer is illegal
[Mesh]
type = GeneratedMesh
dim = 1
nx = 10
xmin = 0
xmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
[]
[sat]
[]
[]
[AuxVariables]
[massfrac_ph0_sp0]
initial_condition = 1
[]
[massfrac_ph1_sp0]
initial_condition = 0
[]
[]
[ICs]
[pinit]
type = ConstantIC
value = 1
variable = pp
[]
[satinit]
type = FunctionIC
function = 1-x
variable = sat
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = sat
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp sat'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1
[]
[]
[FluidProperties]
[simple_fluid0]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 1
thermal_expansion = 0
[]
[simple_fluid1]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 0.1
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow2PhasePS
phase0_porepressure = pp
phase1_saturation = sat
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
mass_fraction_vars = 'massfrac_ph0_sp0 massfrac_ph1_sp0'
[]
[simple_fluid0]
type = PorousFlowSingleComponentFluid
fp = simple_fluid0
phase = 0
[]
[simple_fluid1]
type = PorousFlowSingleComponentFluid
fp = simple_fluid1
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[Postprocessors]
[comp1_total_mass]
type = PorousFlowFluidMass
fluid_component = 1
kernel_variable_number = 2
[]
[]
[Executioner]
type = Transient
solve_type = Newton
dt = 1
end_time = 1
[]
(modules/porous_flow/test/tests/poro_elasticity/undrained_oedometer.i)
# An undrained oedometer test on a saturated poroelastic sample.
#
# The sample is a single unit element, with roller BCs on the sides
# and bottom. A constant displacement is applied to the top: disp_z = -0.01*t.
# There is no fluid flow.
#
# Under these conditions
# porepressure = -(Fluid bulk modulus)*log(1 - 0.01t)
# stress_xx = (bulk - 2*shear/3)*disp_z/L (remember this is effective stress)
# stress_zz = (bulk + 4*shear/3)*disp_z/L (remember this is effective stress)
# where L is the height of the sample (L=1 in this test)
#
# Parameters:
# Bulk modulus = 2
# Shear modulus = 1.5
# fluid bulk modulus = 1
#
# Desired output:
# zdisp = -0.01*t
# p0 = 1*log(1-0.01t)
# stress_xx = stress_yy = -0.01*t
# stress_zz = -0.04*t
#
# Regarding the "log" - it just comes from conserving fluid mass
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -0.5
xmax = 0.5
ymin = -0.5
ymax = 0.5
zmin = -0.5
zmax = 0.5
[]
[GlobalParams]
displacements = 'disp_x disp_y disp_z'
PorousFlowDictator = dictator
block = 0
[]
[Variables]
[disp_x]
[]
[disp_y]
[]
[disp_z]
[]
[porepressure]
[]
[]
[BCs]
[confinex]
type = DirichletBC
variable = disp_x
value = 0
boundary = 'left right'
[]
[confiney]
type = DirichletBC
variable = disp_y
value = 0
boundary = 'bottom top'
[]
[basefixed]
type = DirichletBC
variable = disp_z
value = 0
boundary = back
[]
[top_velocity]
type = FunctionDirichletBC
variable = disp_z
function = -0.01*t
boundary = front
[]
[]
[Kernels]
[grad_stress_x]
type = StressDivergenceTensors
variable = disp_x
component = 0
[]
[grad_stress_y]
type = StressDivergenceTensors
variable = disp_y
component = 1
[]
[grad_stress_z]
type = StressDivergenceTensors
variable = disp_z
component = 2
[]
[poro_vol_exp]
type = PorousFlowMassVolumetricExpansion
variable = porepressure
fluid_component = 0
[]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = porepressure
[]
[]
[AuxVariables]
[stress_xx]
order = CONSTANT
family = MONOMIAL
[]
[stress_xy]
order = CONSTANT
family = MONOMIAL
[]
[stress_xz]
order = CONSTANT
family = MONOMIAL
[]
[stress_yy]
order = CONSTANT
family = MONOMIAL
[]
[stress_yz]
order = CONSTANT
family = MONOMIAL
[]
[stress_zz]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[stress_xx]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_xx
index_i = 0
index_j = 0
[]
[stress_xy]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_xy
index_i = 0
index_j = 1
[]
[stress_xz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_xz
index_i = 0
index_j = 2
[]
[stress_yy]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_yy
index_i = 1
index_j = 1
[]
[stress_yz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_yz
index_i = 1
index_j = 2
[]
[stress_zz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_zz
index_i = 2
index_j = 2
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 1
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[elasticity_tensor]
type = ComputeElasticityTensor
C_ijkl = '1 1.5'
# bulk modulus is lambda + 2*mu/3 = 1 + 2*1.5/3 = 2
fill_method = symmetric_isotropic
[]
[strain]
type = ComputeSmallStrain
[]
[stress]
type = ComputeLinearElasticStress
[]
[vol_strain]
type = PorousFlowVolumetricStrain
[]
[eff_fluid_pressure]
type = PorousFlowEffectiveFluidPressure
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = porepressure
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'porepressure disp_x disp_y disp_z'
number_fluid_phases = 1
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.8
alpha = 1
[]
[]
[Postprocessors]
[fluid_mass]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
[]
[p0]
type = PointValue
outputs = csv
point = '0 0 0'
variable = porepressure
[]
[zdisp]
type = PointValue
outputs = csv
point = '0 0 0.5'
variable = disp_z
[]
[stress_xx]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_xx
[]
[stress_yy]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_yy
[]
[stress_zz]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_zz
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it'
petsc_options_value = 'bcgs bjacobi 1E-14 1E-8 10000'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
start_time = 0
end_time = 10
dt = 1
[]
[Outputs]
execute_on = 'timestep_end'
file_base = undrained_oedometer
[csv]
type = CSV
[]
[]
(modules/porous_flow/examples/lava_lamp/1phase_convection.i)
# Two phase density-driven convection of dissolved CO2 in brine
#
# The model starts with CO2 in the liquid phase only. The CO2 diffuses into the brine.
# As the density of the CO2-saturated brine is greater
# than the unsaturated brine, a gravitational instability arises and density-driven
# convection of CO2-rich fingers descend into the unsaturated brine.
#
# The instability is seeded by a random perturbation to the porosity field.
# Mesh adaptivity is used to refine the mesh as the fingers form.
#
# Note: this model is computationally expensive, so should be run with multiple cores.
[GlobalParams]
PorousFlowDictator = 'dictator'
gravity = '0 -9.81 0'
[]
[Adaptivity]
max_h_level = 2
marker = marker
initial_marker = initial
initial_steps = 2
[Indicators]
[indicator]
type = GradientJumpIndicator
variable = zi
[]
[]
[Markers]
[marker]
type = ErrorFractionMarker
indicator = indicator
refine = 0.8
[]
[initial]
type = BoxMarker
bottom_left = '0 1.95 0'
top_right = '2 2 0'
inside = REFINE
outside = DO_NOTHING
[]
[]
[]
[Mesh]
type = GeneratedMesh
dim = 2
ymin = 1.5
ymax = 2
xmax = 2
ny = 20
nx = 40
bias_y = 0.95
[]
[AuxVariables]
[xnacl]
initial_condition = 0.01
[]
[saturation_gas]
order = FIRST
family = MONOMIAL
[]
[xco2l]
order = FIRST
family = MONOMIAL
[]
[density_liquid]
order = FIRST
family = MONOMIAL
[]
[porosity]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[saturation_gas]
type = PorousFlowPropertyAux
variable = saturation_gas
property = saturation
phase = 1
execute_on = 'timestep_end'
[]
[xco2l]
type = PorousFlowPropertyAux
variable = xco2l
property = mass_fraction
phase = 0
fluid_component = 1
execute_on = 'timestep_end'
[]
[density_liquid]
type = PorousFlowPropertyAux
variable = density_liquid
property = density
phase = 0
execute_on = 'timestep_end'
[]
[]
[Variables]
[pgas]
[]
[zi]
scaling = 1e4
[]
[]
[ICs]
[pressure]
type = FunctionIC
function = 10e6-9.81*1000*y
variable = pgas
[]
[zi]
type = ConstantIC
value = 0
variable = zi
[]
[porosity]
type = RandomIC
variable = porosity
min = 0.25
max = 0.275
seed = 0
[]
[]
[BCs]
[top]
type = DirichletBC
value = 0.04
variable = zi
boundary = top
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pgas
[]
[flux0]
type = PorousFlowAdvectiveFlux
fluid_component = 0
variable = pgas
[]
[diff0]
type = PorousFlowDispersiveFlux
fluid_component = 0
variable = pgas
disp_long = '0 0'
disp_trans = '0 0'
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = zi
[]
[flux1]
type = PorousFlowAdvectiveFlux
fluid_component = 1
variable = zi
[]
[diff1]
type = PorousFlowDispersiveFlux
fluid_component = 1
variable = zi
disp_long = '0 0'
disp_trans = '0 0'
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pgas zi'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureConst
pc = 0
[]
[fs]
type = PorousFlowBrineCO2
brine_fp = brine
co2_fp = co2
capillary_pressure = pc
[]
[]
[FluidProperties]
[co2sw]
type = CO2FluidProperties
[]
[co2]
type = TabulatedBicubicFluidProperties
fp = co2sw
[]
[brine]
type = BrineFluidProperties
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
temperature = '45'
[]
[brineco2]
type = PorousFlowFluidState
gas_porepressure = 'pgas'
z = 'zi'
temperature_unit = Celsius
xnacl = 'xnacl'
capillary_pressure = pc
fluid_state = fs
[]
[porosity]
type = PorousFlowPorosityConst
porosity = porosity
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-11 0 0 0 1e-11 0 0 0 1e-11'
[]
[relperm_water]
type = PorousFlowRelativePermeabilityCorey
phase = 0
n = 2
s_res = 0.1
sum_s_res = 0.2
[]
[relperm_gas]
type = PorousFlowRelativePermeabilityCorey
phase = 1
n = 2
s_res = 0.1
sum_s_res = 0.2
[]
[diffusivity]
type = PorousFlowDiffusivityConst
diffusion_coeff = '2e-9 2e-9 2e-9 2e-9'
tortuosity = '1 1'
[]
[]
[Preconditioning]
active = basic
[mumps_is_best_for_parallel_jobs]
type = SMP
full = true
petsc_options_iname = '-pc_type -pc_factor_mat_solver_package'
petsc_options_value = ' lu mumps'
[]
[basic]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -sub_pc_type -sub_pc_factor_shift_type -pc_asm_overlap'
petsc_options_value = 'gmres asm lu NONZERO 2 '
[]
[]
[Executioner]
type = Transient
solve_type = NEWTON
end_time = 1e6
nl_max_its = 25
l_max_its = 100
dtmax = 1e4
nl_abs_tol = 1e-6
[TimeStepper]
type = IterationAdaptiveDT
dt = 100
growth_factor = 2
cutback_factor = 0.5
[]
[]
[Functions]
[flux]
type = ParsedFunction
symbol_values = 'delta_xco2 dt'
symbol_names = 'dx dt'
expression = 'dx/dt'
[]
[]
[Postprocessors]
[total_co2_in_gas]
type = PorousFlowFluidMass
phase = 1
fluid_component = 1
[]
[total_co2_in_liquid]
type = PorousFlowFluidMass
phase = 0
fluid_component = 1
[]
[numdofs]
type = NumDOFs
[]
[delta_xco2]
type = ChangeOverTimePostprocessor
postprocessor = total_co2_in_liquid
[]
[dt]
type = TimestepSize
[]
[flux]
type = FunctionValuePostprocessor
function = flux
[]
[]
[Outputs]
print_linear_residuals = false
perf_graph = true
exodus = true
csv = true
[]
(modules/porous_flow/test/tests/gravity/grav02c.i)
# Checking that gravity head is established in the transient situation when 0<=saturation<=1 (note the less-than-or-equal-to).
# 2phase (PP), 2components, vanGenuchten, constant fluid bulk-moduli for each phase, constant viscosity, constant permeability, Corey relative perm
# For better agreement with the analytical solution (ana_pp), just increase nx
[Mesh]
type = GeneratedMesh
dim = 1
nx = 10
xmin = -1
xmax = 0
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Functions]
[dts]
type = PiecewiseLinear
y = '1E-3 1E-2 1E-1'
x = '1E-3 1E-2 1E-1'
[]
[]
[Variables]
[ppwater]
initial_condition = -0.1
[]
[ppgas]
initial_condition = 0
[]
[]
[AuxVariables]
[massfrac_ph0_sp0]
initial_condition = 1
[]
[massfrac_ph1_sp0]
initial_condition = 0
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = ppwater
[]
[flux0]
type = PorousFlowAdvectiveFlux
fluid_component = 0
variable = ppwater
gravity = '-1 0 0'
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = ppgas
[]
[flux1]
type = PorousFlowAdvectiveFlux
fluid_component = 1
variable = ppgas
gravity = '-1 0 0'
[]
[]
[Functions]
[ana_ppwater]
type = ParsedFunction
symbol_names = 'g B p0 rho0'
symbol_values = '1 2 pp_water_top 1'
expression = '-B*log(exp(-p0/B)+g*rho0*x/B)' # expected pp at base
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'ppwater ppgas'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1
[]
[]
[FluidProperties]
[simple_fluid0]
type = SimpleFluidProperties
bulk_modulus = 2
density0 = 1
viscosity = 1
thermal_expansion = 0
[]
[simple_fluid1]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 0.1
viscosity = 0.5
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow2PhasePP
phase0_porepressure = ppwater
phase1_porepressure = ppgas
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
mass_fraction_vars = 'massfrac_ph0_sp0 massfrac_ph1_sp0'
[]
[simple_fluid0]
type = PorousFlowSingleComponentFluid
fp = simple_fluid0
phase = 0
[]
[simple_fluid1]
type = PorousFlowSingleComponentFluid
fp = simple_fluid1
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1 0 0 0 2 0 0 0 3'
[]
[relperm_water]
type = PorousFlowRelativePermeabilityCorey
n = 1
phase = 0
[]
[relperm_gas]
type = PorousFlowRelativePermeabilityCorey
n = 1
phase = 1
[]
[]
[Postprocessors]
[pp_water_top]
type = PointValue
variable = ppwater
point = '0 0 0'
[]
[pp_water_base]
type = PointValue
variable = ppwater
point = '-1 0 0'
[]
[pp_water_analytical]
type = FunctionValuePostprocessor
function = ana_ppwater
point = '-1 0 0'
[]
[mass_ph0]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
[]
[mass_ph1]
type = PorousFlowFluidMass
fluid_component = 1
execute_on = 'initial timestep_end'
[]
[]
[Preconditioning]
active = andy
[andy]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it'
petsc_options_value = 'bcgs bjacobi 1E-12 1E-10 10000'
[]
[check]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -snes_type'
petsc_options_value = 'bcgs bjacobi 1E-12 1E-10 10000 test'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
[TimeStepper]
type = FunctionDT
function = dts
[]
end_time = 1.0
[]
[Outputs]
execute_on = 'initial timestep_end'
file_base = grav02c
[csv]
type = CSV
[]
exodus = true
[]
(modules/porous_flow/test/tests/dirackernels/bh04.i)
# fully-saturated
# production
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Functions]
[dts]
type = PiecewiseLinear
y = '1E-2 1E-1 1 1E1 1E2 1E3'
x = '0 1E-1 1 1E1 1E2 1E3'
[]
[]
[Variables]
[pp]
initial_condition = 0
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.8
alpha = 1e-5
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-12 0 0 0 1E-12 0 0 0 1E-12'
[]
[relperm]
type = PorousFlowRelativePermeabilityFLAC
m = 2
phase = 0
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
variable = pp
SumQuantityUO = borehole_total_outflow_mass
point_file = bh02.bh
fluid_phase = 0
bottom_p_or_t = -1E6
unit_weight = '0 0 0'
use_mobility = true
character = 1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
indirect_dependencies = 'fluid_mass1 fluid_mass0 bh_report'
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 1E3
solve_type = NEWTON
[TimeStepper]
type = FunctionDT
function = dts
[]
[]
[Outputs]
file_base = bh04
exodus = false
csv = true
execute_on = timestep_end
[]
(modules/porous_flow/test/tests/dirackernels/bh_except11.i)
# PorousFlowPeacemanBorehole exception test
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = TimeDerivative
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
bottom_p_or_t = 0
fluid_phase = 0
point_file = bh02.bh
use_relative_permeability = true
SumQuantityUO = borehole_total_outflow_mass
variable = pp
unit_weight = '0 0 0'
character = 1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 0.5
dt = 1E-2
solve_type = NEWTON
[]
(modules/porous_flow/test/tests/dirackernels/bh07.i)
# Comparison with analytical solution for cylindrically-symmetric situation
[Mesh]
type = FileMesh
file = bh07_input.e
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Functions]
[dts]
type = PiecewiseLinear
y = '1000 10000'
x = '100 1000'
[]
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[fflux]
type = PorousFlowAdvectiveFlux
fluid_component = 0
variable = pp
gravity = '0 0 0'
[]
[]
[BCs]
[fix_outer]
type = DirichletBC
boundary = perimeter
variable = pp
value = 1E7
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.8
alpha = 1e-5
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-11 0 0 0 1E-11 0 0 0 1E-11'
[]
[relperm]
type = PorousFlowRelativePermeabilityFLAC
m = 2
phase = 0
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
variable = pp
SumQuantityUO = borehole_total_outflow_mass
point_file = bh07.bh
fluid_phase = 0
bottom_p_or_t = 0
unit_weight = '0 0 0'
use_mobility = true
re_constant = 0.1594 # use Chen and Zhang version
character = 2 # double the strength because bh07.bh only fills half the mesh
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
execute_on = 'initial timestep_end'
[]
[fluid_mass]
type = PorousFlowFluidMass
execute_on = 'initial timestep_end'
[]
[]
[VectorPostprocessors]
[pp]
type = LineValueSampler
variable = pp
start_point = '0 0 0'
end_point = '300 0 0'
sort_by = x
num_points = 300
execute_on = timestep_end
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 1E3
solve_type = NEWTON
[TimeStepper]
# get only marginally better results for smaller time steps
type = FunctionDT
function = dts
[]
[]
[Outputs]
file_base = bh07
[along_line]
type = CSV
execute_on = final
[]
[exodus]
type = Exodus
execute_on = 'initial final'
[]
[]
(modules/porous_flow/test/tests/radioactive_decay/radioactive_decay01.i)
# checking radioactive decay
# 1phase, 1component, constant porosity
#
# Note that we don't get mass = mass0 * exp(-Lambda * t)
# because of the time discretisation. We are solving
# the equation
# (mass - mass0)/dt = -Lambda * mass
# which has the solution
# mass = mass0/(1 + Lambda * dt)
[Mesh]
type = GeneratedMesh
dim = 1
nx = 3
xmin = -1
xmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
[]
[]
[ICs]
[pinit]
type = FunctionIC
function = 10
variable = pp
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[decay]
type = PorousFlowMassRadioactiveDecay
fluid_component = 0
variable = pp
decay_rate = 2.0
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 1
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[Postprocessors]
[total_mass]
type = PorousFlowFluidMass
execute_on = 'timestep_end'
[]
[total_mass0]
type = PorousFlowFluidMass
execute_on = 'timestep_begin'
[]
[should_be_zero]
type = FunctionValuePostprocessor
function = should_be_0
[]
[]
[Functions]
[should_be_0]
type = ParsedFunction
symbol_names = 'm0 m rate dt'
symbol_values = 'total_mass0 total_mass 2.0 1'
expression = 'm-m0/(1.0+rate*dt)'
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
dt = 1
num_steps = 1
[]
[Outputs]
execute_on = 'timestep_end'
file_base = radioactive_decay01
csv = true
[]
(modules/porous_flow/test/tests/mass_conservation/mass12.i)
# The sample is an annulus in RZ coordinates.
# Roller BCs are applied to the r_min, r_max and bottom boundaries
# A constant displacement is applied to the top: disp_z = -0.01*t.
# There is no fluid flow.
# Fluid mass conservation is checked.
#
# Under these conditions
# fluid_mass = volume0 * rho0 * exp(P0/bulk) = pi*3 * 1 * exp(0.1/0.5) = 11.51145
# volume0 * rho0 * exp(P0/bulk) = volume * rho0 * exp(P/bulk), so
# P - P0 = bulk * log(volume0 / volume) = 0.5 * log(1 / (1 - 0.01*t))
[Mesh]
type = GeneratedMesh
dim = 2
nx = 1
ny = 1
xmin = 1.0
xmax = 2.0
ymin = -0.5
ymax = 0.5
coord_type = RZ
[]
[GlobalParams]
displacements = 'disp_r disp_z'
PorousFlowDictator = dictator
block = 0
[]
[Variables]
[disp_r]
[]
[disp_z]
[]
[porepressure]
initial_condition = 0.1
[]
[]
[BCs]
[bottom_roller]
type = DirichletBC
variable = disp_z
value = 0
boundary = bottom
[]
[side_rollers]
type = DirichletBC
variable = disp_r
value = 0
boundary = 'left right'
[]
[top_move]
type = FunctionDirichletBC
variable = disp_z
function = -0.01*t
boundary = top
[]
[]
[Kernels]
[grad_stress_r]
type = StressDivergenceRZTensors
variable = disp_r
component = 0
[]
[grad_stress_z]
type = StressDivergenceRZTensors
variable = disp_z
component = 1
[]
[poro_r]
type = PorousFlowEffectiveStressCoupling
biot_coefficient = 0.3
variable = disp_r
component = 0
[]
[poro_z]
type = PorousFlowEffectiveStressCoupling
biot_coefficient = 0.3
variable = disp_z
component = 1
[]
[poro_vol_exp]
type = PorousFlowMassVolumetricExpansion
variable = porepressure
fluid_component = 0
[]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = porepressure
[]
[]
[AuxVariables]
[stress_rr]
order = CONSTANT
family = MONOMIAL
[]
[stress_rz]
order = CONSTANT
family = MONOMIAL
[]
[stress_zz]
order = CONSTANT
family = MONOMIAL
[]
[stress_tt]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[stress_rr]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_rr
index_i = 0
index_j = 0
[]
[stress_rz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_rz
index_i = 0
index_j = 1
[]
[stress_zz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_zz
index_i = 1
index_j = 1
[]
[stress_tt]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_tt
index_i = 2
index_j = 2
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 0.5
density0 = 1
thermal_expansion = 0
viscosity = 1
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[elasticity_tensor]
type = ComputeElasticityTensor
C_ijkl = '1 1.5'
# bulk modulus is lambda + 2*mu/3 = 1 + 2*1.5/3 = 2
fill_method = symmetric_isotropic
[]
[strain]
type = ComputeAxisymmetricRZSmallStrain
[]
[stress]
type = ComputeLinearElasticStress
[]
[vol_strain]
type = PorousFlowVolumetricStrain
[]
[eff_fluid_pressure]
type = PorousFlowEffectiveFluidPressure
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = porepressure
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '0.5 0 0 0 0.5 0 0 0 0.5'
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'porepressure disp_r disp_z'
number_fluid_phases = 1
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1
[]
[]
[Postprocessors]
[p0]
type = PointValue
outputs = 'console csv'
execute_on = 'initial timestep_end'
point = '1 0 0'
variable = porepressure
[]
[rdisp]
type = PointValue
outputs = csv
point = '2 0 0'
use_displaced_mesh = false
variable = disp_r
[]
[stress_rr]
type = PointValue
outputs = csv
point = '1 0 0'
variable = stress_rr
[]
[stress_zz]
type = PointValue
outputs = csv
point = '1 0 0'
variable = stress_zz
[]
[stress_tt]
type = PointValue
outputs = csv
point = '1 0 0'
variable = stress_tt
[]
[fluid_mass]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
outputs = 'console csv'
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it'
petsc_options_value = 'bcgs bjacobi 1E-14 1E-8 10000'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
start_time = 0
end_time = 10
dt = 2
[]
[Outputs]
execute_on = 'initial timestep_end'
[csv]
type = CSV
[]
[]
(modules/porous_flow/test/tests/dirackernels/bh_except12.i)
# PorousFlowPeacemanBorehole exception test
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = TimeDerivative
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-12 0 0 0 1E-12 0 0 0 1E-12'
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
bottom_p_or_t = 0
fluid_phase = 0
point_file = does_not_exist
SumQuantityUO = borehole_total_outflow_mass
variable = pp
unit_weight = '0 0 0'
character = 1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 0.5
dt = 1E-2
solve_type = NEWTON
[]
(modules/porous_flow/examples/restart/gas_injection.i)
# Using the results from the equilibrium run to provide the initial condition for
# porepressure, we now inject a gas phase into the brine-saturated reservoir. In this
# example, where the mesh used is identical to the mesh used in gravityeq.i, we can use
# the basic restart capability by simply setting the initial condition for porepressure
# using the results from gravityeq.i.
#
# Even though the gravity equilibrium is established using a 2D mesh, in this example,
# we shift the mesh 0.1 m to the right and rotate it about the Y axis to make a 2D radial
# model.
#
# Methane injection takes place over the surface of the hole created by rotating the mesh,
# and hence the injection area is 2 pi r h. We can calculate this using an AreaPostprocessor,
# and then use this in a ParsedFunction to calculate the injection rate so that 10 kg/s of
# methane is injected.
#
# Results can be improved by uniformly refining the initial mesh.
#
# Note: as this example uses the results from a previous simulation, gravityeq.i MUST be
# run before running this input file.
[Mesh]
uniform_refine = 1
[file]
type = FileMeshGenerator
file = gravityeq_out.e
[]
[translate]
type = TransformGenerator
transform = TRANSLATE
vector_value = '0.1 0 0'
input = file
[]
coord_type = RZ
rz_coord_axis = Y
[]
[GlobalParams]
PorousFlowDictator = dictator
gravity = '0 -9.81 0'
temperature_unit = Celsius
[]
[Variables]
[pp_liq]
initial_from_file_var = porepressure
[]
[sat_gas]
initial_condition = 0
[]
[]
[AuxVariables]
[temperature]
initial_condition = 50
[]
[xnacl]
initial_condition = 0.1
[]
[brine_density]
family = MONOMIAL
order = CONSTANT
[]
[methane_density]
family = MONOMIAL
order = CONSTANT
[]
[massfrac_ph0_sp0]
initial_condition = 1
[]
[massfrac_ph1_sp0]
initial_condition = 0
[]
[pp_gas]
family = MONOMIAL
order = CONSTANT
[]
[sat_liq]
family = MONOMIAL
order = CONSTANT
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
variable = pp_liq
[]
[flux0]
type = PorousFlowAdvectiveFlux
variable = pp_liq
[]
[mass1]
type = PorousFlowMassTimeDerivative
variable = sat_gas
fluid_component = 1
[]
[flux1]
type = PorousFlowAdvectiveFlux
variable = sat_gas
fluid_component = 1
[]
[]
[AuxKernels]
[brine_density]
type = PorousFlowPropertyAux
property = density
variable = brine_density
execute_on = 'initial timestep_end'
[]
[methane_density]
type = PorousFlowPropertyAux
property = density
variable = methane_density
phase = 1
execute_on = 'initial timestep_end'
[]
[pp_gas]
type = PorousFlowPropertyAux
property = pressure
phase = 1
variable = pp_gas
execute_on = 'initial timestep_end'
[]
[sat_liq]
type = PorousFlowPropertyAux
property = saturation
variable = sat_liq
execute_on = 'initial timestep_end'
[]
[]
[BCs]
[gas_injection]
type = PorousFlowSink
boundary = left
variable = sat_gas
flux_function = injection_rate
fluid_phase = 1
[]
[brine_out]
type = PorousFlowPiecewiseLinearSink
boundary = right
variable = pp_liq
multipliers = '0 1e9'
pt_vals = '0 1e9'
fluid_phase = 0
flux_function = 1e-6
use_mobility = true
[]
[]
[Functions]
[injection_rate]
type = ParsedFunction
symbol_values = injection_area
symbol_names = area
expression = '-10/area'
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp_liq sat_gas'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureVG
alpha = 1e-5
m = 0.5
sat_lr = 0.2
[]
[]
[FluidProperties]
[brine]
type = BrineFluidProperties
[]
[methane]
type = MethaneFluidProperties
[]
[methane_tab]
type = TabulatedBicubicFluidProperties
fp = methane
save_file = false
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
temperature = temperature
[]
[ps]
type = PorousFlow2PhasePS
phase0_porepressure = pp_liq
phase1_saturation = sat_gas
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
mass_fraction_vars = 'massfrac_ph0_sp0 massfrac_ph1_sp0'
[]
[brine]
type = PorousFlowBrine
compute_enthalpy = false
compute_internal_energy = false
xnacl = xnacl
phase = 0
[]
[methane]
type = PorousFlowSingleComponentFluid
compute_enthalpy = false
compute_internal_energy = false
fp = methane_tab
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-13 0 0 0 1e-13 0 0 0 1e-13'
[]
[relperm_liq]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
s_res = 0.2
sum_s_res = 0.3
[]
[relperm_gas]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 1
s_res = 0.1
sum_s_res = 0.3
[]
[]
[Preconditioning]
[smp]
type = SMP
full = true
petsc_options_iname = '-pc_type -sub_pc_type -sub_pc_factor_shift_type'
petsc_options_value = ' asm lu NONZERO'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
end_time = 1e8
nl_abs_tol = 1e-12
nl_rel_tol = 1e-06
nl_max_its = 20
dtmax = 1e6
[TimeStepper]
type = IterationAdaptiveDT
dt = 1e1
[]
[]
[Postprocessors]
[mass_ph0]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
[]
[mass_ph1]
type = PorousFlowFluidMass
fluid_component = 1
execute_on = 'initial timestep_end'
[]
[injection_area]
type = AreaPostprocessor
boundary = left
execute_on = initial
[]
[]
[Outputs]
execute_on = 'initial timestep_end'
exodus = true
perf_graph = true
checkpoint = true
[]
(modules/porous_flow/test/tests/fluidstate/water_vapor.i)
# Tests correct calculation of properties in PorousFlowWaterVapor in the two-phase region
[Mesh]
type = GeneratedMesh
dim = 2
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pliq]
initial_condition = 1e6
[]
[h]
initial_condition = 8e5
scaling = 1e-3
[]
[]
[AuxVariables]
[pressure_gas]
order = CONSTANT
family = MONOMIAL
[]
[pressure_water]
order = CONSTANT
family = MONOMIAL
[]
[enthalpy_gas]
order = CONSTANT
family = MONOMIAL
[]
[enthalpy_water]
order = CONSTANT
family = MONOMIAL
[]
[saturation_gas]
order = CONSTANT
family = MONOMIAL
[]
[saturation_water]
order = CONSTANT
family = MONOMIAL
[]
[density_water]
order = CONSTANT
family = MONOMIAL
[]
[density_gas]
order = CONSTANT
family = MONOMIAL
[]
[viscosity_water]
order = CONSTANT
family = MONOMIAL
[]
[viscosity_gas]
order = CONSTANT
family = MONOMIAL
[]
[temperature]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[enthalpy_water]
type = PorousFlowPropertyAux
variable = enthalpy_water
property = enthalpy
phase = 0
execute_on = 'initial timestep_end'
[]
[enthalpy_gas]
type = PorousFlowPropertyAux
variable = enthalpy_gas
property = enthalpy
phase = 1
execute_on = 'initial timestep_end'
[]
[pressure_water]
type = PorousFlowPropertyAux
variable = pressure_water
property = pressure
phase = 0
execute_on = 'initial timestep_end'
[]
[pressure_gas]
type = PorousFlowPropertyAux
variable = pressure_gas
property = pressure
phase = 1
execute_on = 'initial timestep_end'
[]
[saturation_water]
type = PorousFlowPropertyAux
variable = saturation_water
property = saturation
phase = 0
execute_on = 'initial timestep_end'
[]
[saturation_gas]
type = PorousFlowPropertyAux
variable = saturation_gas
property = saturation
phase = 1
execute_on = 'initial timestep_end'
[]
[density_water]
type = PorousFlowPropertyAux
variable = density_water
property = density
phase = 0
execute_on = 'initial timestep_end'
[]
[density_gas]
type = PorousFlowPropertyAux
variable = density_gas
property = density
phase = 1
execute_on = 'initial timestep_end'
[]
[viscosity_water]
type = PorousFlowPropertyAux
variable = viscosity_water
property = viscosity
phase = 0
execute_on = 'initial timestep_end'
[]
[viscosity_gas]
type = PorousFlowPropertyAux
variable = viscosity_gas
property = viscosity
phase = 1
execute_on = 'initial timestep_end'
[]
[temperature]
type = PorousFlowPropertyAux
variable = temperature
property = temperature
execute_on = 'initial timestep_end'
[]
[]
[Kernels]
[mass]
type = PorousFlowMassTimeDerivative
variable = pliq
[]
[heat]
type = PorousFlowEnergyTimeDerivative
variable = h
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pliq h'
number_fluid_phases = 2
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureBC
pe = 1e5
lambda = 2
pc_max = 1e6
[]
[fs]
type = PorousFlowWaterVapor
water_fp = water
capillary_pressure = pc
[]
[]
[FluidProperties]
[water]
type = Water97FluidProperties
[]
[]
[Materials]
[watervapor]
type = PorousFlowFluidStateSingleComponent
porepressure = pliq
enthalpy = h
temperature_unit = Celsius
capillary_pressure = pc
fluid_state = fs
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-13 0 0 0 1e-13 0 0 0 1e-13'
[]
[relperm0]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[relperm1]
type = PorousFlowRelativePermeabilityCorey
n = 3
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[internal_energy]
type = PorousFlowMatrixInternalEnergy
density = 2500
specific_heat_capacity = 1200
[]
[]
[Executioner]
type = Transient
solve_type = NEWTON
end_time = 1
nl_abs_tol = 1e-12
[]
[Preconditioning]
[smp]
type = SMP
full = true
[]
[]
[Postprocessors]
[density_water]
type = ElementAverageValue
variable = density_water
execute_on = 'initial timestep_end'
[]
[density_gas]
type = ElementAverageValue
variable = density_gas
execute_on = 'initial timestep_end'
[]
[viscosity_water]
type = ElementAverageValue
variable = viscosity_water
execute_on = 'initial timestep_end'
[]
[viscosity_gas]
type = ElementAverageValue
variable = viscosity_gas
execute_on = 'initial timestep_end'
[]
[enthalpy_water]
type = ElementAverageValue
variable = enthalpy_water
execute_on = 'initial timestep_end'
[]
[enthalpy_gas]
type = ElementAverageValue
variable = enthalpy_gas
execute_on = 'initial timestep_end'
[]
[sg]
type = ElementAverageValue
variable = saturation_gas
execute_on = 'initial timestep_end'
[]
[sw]
type = ElementAverageValue
variable = saturation_water
execute_on = 'initial timestep_end'
[]
[pwater]
type = ElementAverageValue
variable = pressure_water
execute_on = 'initial timestep_end'
[]
[pgas]
type = ElementAverageValue
variable = pressure_gas
execute_on = 'initial timestep_end'
[]
[temperature]
type = ElementAverageValue
variable = temperature
execute_on = 'initial timestep_end'
[]
[enthalpy]
type = ElementAverageValue
variable = h
execute_on = 'initial timestep_end'
[]
[liquid_mass]
type = PorousFlowFluidMass
phase = 0
execute_on = 'initial timestep_end'
[]
[vapor_mass]
type = PorousFlowFluidMass
phase = 1
execute_on = 'initial timestep_end'
[]
[]
[Outputs]
file_base = water_vapor_twophase
csv = true
[]
(modules/porous_flow/test/tests/poro_elasticity/pp_generation_action.i)
# Same as pp_generation.i, but using an Action
#
# A sample is constrained on all sides and its boundaries are
# also impermeable. Fluid is pumped into the sample via a
# volumetric source (ie kg/second per cubic meter), and the
# rise in porepressure is observed.
#
# Source = s (units = kg/m^3/second)
#
# Expect:
# fluid_mass = mass0 + s*t
# stress = 0 (remember this is effective stress)
# Porepressure = fluid_bulk*log(fluid_mass_density/density_P0), where fluid_mass_density = fluid_mass*porosity
# porosity = biot+(phi0-biot)*exp(pp(biot-1)/solid_bulk)
#
# Parameters:
# Biot coefficient = 0.3
# Phi0 = 0.1
# Solid Bulk modulus = 2
# fluid_bulk = 13
# density_P0 = 1
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -0.5
xmax = 0.5
ymin = -0.5
ymax = 0.5
zmin = -0.5
zmax = 0.5
[]
[GlobalParams]
displacements = 'disp_x disp_y disp_z'
PorousFlowDictator = dictator
block = 0
[]
[Variables]
[disp_x]
[]
[disp_y]
[]
[disp_z]
[]
[porepressure]
[]
[]
[FluidProperties]
[the_simple_fluid]
type = SimpleFluidProperties
thermal_expansion = 0.0
bulk_modulus = 13.0
viscosity = 1.0
density0 = 1.0
[]
[]
[PorousFlowUnsaturated]
coupling_type = HydroMechanical
displacements = 'disp_x disp_y disp_z'
porepressure = porepressure
biot_coefficient = 0.3
gravity = '0 0 0'
fp = the_simple_fluid
van_genuchten_alpha = 1.0
van_genuchten_m = 0.8
relative_permeability_type = Corey
relative_permeability_exponent = 0.0
save_component_rate_in = nodal_kg_per_s
[]
[BCs]
[confinex]
type = DirichletBC
variable = disp_x
value = 0
boundary = 'left right'
[]
[confiney]
type = DirichletBC
variable = disp_y
value = 0
boundary = 'bottom top'
[]
[confinez]
type = DirichletBC
variable = disp_z
value = 0
boundary = 'back front'
[]
[]
[Kernels]
[source]
type = BodyForce
function = 0.1
variable = porepressure
[]
[]
[AuxVariables]
[porosity]
order = CONSTANT
family = MONOMIAL
[]
[nodal_kg_per_s]
[]
[]
[AuxKernels]
[porosity]
type = PorousFlowPropertyAux
variable = porosity
property = porosity
[]
[]
[Materials]
[elasticity_tensor]
type = ComputeElasticityTensor
C_ijkl = '1 1.5'
# bulk modulus is lambda + 2*mu/3 = 1 + 2*1.5/3 = 2
fill_method = symmetric_isotropic
[]
[strain]
type = ComputeSmallStrain
[]
[stress]
type = ComputeLinearElasticStress
[]
[porosity]
type = PorousFlowPorosity
fluid = true
mechanical = true
porosity_zero = 0.1
biot_coefficient = 0.3
solid_bulk = 2
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1 0 0 0 1 0 0 0 1' # unimportant
[]
[]
[Functions]
[porosity_analytic]
type = ParsedFunction
expression = 'biot+(phi0-biot)*exp(pp*(biot-1)/bulk)'
symbol_names = 'biot phi0 pp bulk'
symbol_values = '0.3 0.1 p0 2'
[]
[]
[Postprocessors]
[nodal_kg_per_s]
type = PointValue
outputs = csv
point = '0 0 0'
variable = nodal_kg_per_s
[]
[fluid_mass]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
[]
[porosity]
type = PointValue
outputs = 'console csv'
point = '0 0 0'
variable = porosity
[]
[p0]
type = PointValue
outputs = csv
point = '0 0 0'
variable = porepressure
[]
[porosity_analytic]
type = FunctionValuePostprocessor
function = porosity_analytic
[]
[zdisp]
type = PointValue
outputs = csv
point = '0 0 0.5'
variable = disp_z
[]
[stress_xx]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_xx
[]
[stress_yy]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_yy
[]
[stress_zz]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_zz
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it'
petsc_options_value = 'bcgs bjacobi 1E-14 1E-10 10000'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
start_time = 0
end_time = 10
dt = 1
[]
[Outputs]
execute_on = 'timestep_end'
file_base = pp_generation_action
csv = true
[]
(modules/porous_flow/test/tests/fluidstate/brineco2_hightemp.i)
# Tests correct calculation of properties in PorousFlowBrineCO2 in the elevated
# temperature regime (T > 110C)
[Mesh]
type = GeneratedMesh
dim = 2
[]
[GlobalParams]
PorousFlowDictator = dictator
temperature = 250
[]
[Variables]
[pgas]
initial_condition = 20e6
[]
[z]
initial_condition = 0.2
[]
[]
[AuxVariables]
[xnacl]
initial_condition = 0.1
[]
[pressure_gas]
order = CONSTANT
family = MONOMIAL
[]
[pressure_water]
order = CONSTANT
family = MONOMIAL
[]
[saturation_gas]
order = CONSTANT
family = MONOMIAL
[]
[saturation_water]
order = CONSTANT
family = MONOMIAL
[]
[density_water]
order = CONSTANT
family = MONOMIAL
[]
[density_gas]
order = CONSTANT
family = MONOMIAL
[]
[viscosity_water]
order = CONSTANT
family = MONOMIAL
[]
[viscosity_gas]
order = CONSTANT
family = MONOMIAL
[]
[x0_water]
order = CONSTANT
family = MONOMIAL
[]
[x0_gas]
order = CONSTANT
family = MONOMIAL
[]
[x1_water]
order = CONSTANT
family = MONOMIAL
[]
[x1_gas]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[pressure_water]
type = PorousFlowPropertyAux
variable = pressure_water
property = pressure
phase = 0
execute_on = timestep_end
[]
[pressure_gas]
type = PorousFlowPropertyAux
variable = pressure_gas
property = pressure
phase = 1
execute_on = timestep_end
[]
[saturation_water]
type = PorousFlowPropertyAux
variable = saturation_water
property = saturation
phase = 0
execute_on = timestep_end
[]
[saturation_gas]
type = PorousFlowPropertyAux
variable = saturation_gas
property = saturation
phase = 1
execute_on = timestep_end
[]
[density_water]
type = PorousFlowPropertyAux
variable = density_water
property = density
phase = 0
execute_on = timestep_end
[]
[density_gas]
type = PorousFlowPropertyAux
variable = density_gas
property = density
phase = 1
execute_on = timestep_end
[]
[viscosity_water]
type = PorousFlowPropertyAux
variable = viscosity_water
property = viscosity
phase = 0
execute_on = timestep_end
[]
[viscosity_gas]
type = PorousFlowPropertyAux
variable = viscosity_gas
property = viscosity
phase = 1
execute_on = timestep_end
[]
[x1_water]
type = PorousFlowPropertyAux
variable = x1_water
property = mass_fraction
phase = 0
fluid_component = 1
execute_on = timestep_end
[]
[x1_gas]
type = PorousFlowPropertyAux
variable = x1_gas
property = mass_fraction
phase = 1
fluid_component = 1
execute_on = timestep_end
[]
[x0_water]
type = PorousFlowPropertyAux
variable = x0_water
property = mass_fraction
phase = 0
fluid_component = 0
execute_on = timestep_end
[]
[x0_gas]
type = PorousFlowPropertyAux
variable = x0_gas
property = mass_fraction
phase = 1
fluid_component = 0
execute_on = timestep_end
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
variable = pgas
fluid_component = 0
[]
[mass1]
type = PorousFlowMassTimeDerivative
variable = z
fluid_component = 1
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pgas z'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureConst
pc = 0
[]
[fs]
type = PorousFlowBrineCO2
brine_fp = brine
co2_fp = co2
capillary_pressure = pc
[]
[]
[FluidProperties]
[co2]
type = CO2FluidProperties
[]
[brine]
type = BrineFluidProperties
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[brineco2]
type = PorousFlowFluidState
gas_porepressure = pgas
z = z
temperature_unit = Celsius
xnacl = xnacl
capillary_pressure = pc
fluid_state = fs
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1e-12 0 0 0 1e-12 0 0 0 1e-12'
[]
[relperm0]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[relperm1]
type = PorousFlowRelativePermeabilityCorey
n = 3
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[Executioner]
type = Transient
solve_type = NEWTON
dt = 1
end_time = 1
nl_abs_tol = 1e-12
[]
[Preconditioning]
[smp]
type = SMP
full = true
[]
[]
[Postprocessors]
[density_water]
type = ElementIntegralVariablePostprocessor
variable = density_water
[]
[density_gas]
type = ElementIntegralVariablePostprocessor
variable = density_gas
[]
[viscosity_water]
type = ElementIntegralVariablePostprocessor
variable = viscosity_water
[]
[viscosity_gas]
type = ElementIntegralVariablePostprocessor
variable = viscosity_gas
[]
[x1_water]
type = ElementIntegralVariablePostprocessor
variable = x1_water
[]
[x0_water]
type = ElementIntegralVariablePostprocessor
variable = x0_water
[]
[x1_gas]
type = ElementIntegralVariablePostprocessor
variable = x1_gas
[]
[x0_gas]
type = ElementIntegralVariablePostprocessor
variable = x0_gas
[]
[sg]
type = ElementIntegralVariablePostprocessor
variable = saturation_gas
[]
[sw]
type = ElementIntegralVariablePostprocessor
variable = saturation_water
[]
[pwater]
type = ElementIntegralVariablePostprocessor
variable = pressure_water
[]
[pgas]
type = ElementIntegralVariablePostprocessor
variable = pressure_gas
[]
[x0mass]
type = PorousFlowFluidMass
fluid_component = 0
phase = '0 1'
[]
[x1mass]
type = PorousFlowFluidMass
fluid_component = 1
phase = '0 1'
[]
[]
[Outputs]
csv = true
execute_on = 'TIMESTEP_END'
perf_graph = false
[]
(modules/porous_flow/test/tests/mass_conservation/mass04.i)
# The sample is a single unit element, with roller BCs on the sides
# and bottom. A constant displacement is applied to the top: disp_z = -0.01*t.
# There is no fluid flow.
# Fluid mass conservation is checked.
#
# Under these conditions
# porepressure = porepressure(t=0) - (Fluid bulk modulus)*log(1 - 0.01*t)
# stress_xx = (bulk - 2*shear/3)*disp_z/L (remember this is effective stress)
# stress_zz = (bulk + 4*shear/3)*disp_z/L (remember this is effective stress)
# where L is the height of the sample (L=1 in this test)
#
# Parameters:
# Bulk modulus = 2
# Shear modulus = 1.5
# fluid bulk modulus = 0.5
# initial porepressure = 0.1
#
# Desired output:
# zdisp = -0.01*t
# p0 = 0.1 - 0.5*log(1-0.01*t)
# stress_xx = stress_yy = -0.01*t
# stress_zz = -0.04*t
#
# Regarding the "log" - it comes from preserving fluid mass
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -0.5
xmax = 0.5
ymin = -0.5
ymax = 0.5
zmin = -0.5
zmax = 0.5
[]
[GlobalParams]
displacements = 'disp_x disp_y disp_z'
PorousFlowDictator = dictator
block = 0
[]
[Variables]
[disp_x]
[]
[disp_y]
[]
[disp_z]
[]
[porepressure]
initial_condition = 0.1
[]
[]
[BCs]
[confinex]
type = DirichletBC
variable = disp_x
value = 0
boundary = 'left right'
[]
[confiney]
type = DirichletBC
variable = disp_y
value = 0
boundary = 'bottom top'
[]
[basefixed]
type = DirichletBC
variable = disp_z
value = 0
boundary = back
[]
[top_velocity]
type = FunctionDirichletBC
variable = disp_z
function = -0.01*t
boundary = front
[]
[]
[Kernels]
[grad_stress_x]
type = StressDivergenceTensors
variable = disp_x
component = 0
[]
[grad_stress_y]
type = StressDivergenceTensors
variable = disp_y
component = 1
[]
[grad_stress_z]
type = StressDivergenceTensors
variable = disp_z
component = 2
[]
[poro_x]
type = PorousFlowEffectiveStressCoupling
biot_coefficient = 0.3
variable = disp_x
component = 0
[]
[poro_y]
type = PorousFlowEffectiveStressCoupling
biot_coefficient = 0.3
variable = disp_y
component = 1
[]
[poro_z]
type = PorousFlowEffectiveStressCoupling
biot_coefficient = 0.3
component = 2
variable = disp_z
[]
[poro_vol_exp]
type = PorousFlowMassVolumetricExpansion
variable = porepressure
fluid_component = 0
[]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = porepressure
[]
[]
[AuxVariables]
[stress_xx]
order = CONSTANT
family = MONOMIAL
[]
[stress_xy]
order = CONSTANT
family = MONOMIAL
[]
[stress_xz]
order = CONSTANT
family = MONOMIAL
[]
[stress_yy]
order = CONSTANT
family = MONOMIAL
[]
[stress_yz]
order = CONSTANT
family = MONOMIAL
[]
[stress_zz]
order = CONSTANT
family = MONOMIAL
[]
[]
[AuxKernels]
[stress_xx]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_xx
index_i = 0
index_j = 0
[]
[stress_xy]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_xy
index_i = 0
index_j = 1
[]
[stress_xz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_xz
index_i = 0
index_j = 2
[]
[stress_yy]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_yy
index_i = 1
index_j = 1
[]
[stress_yz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_yz
index_i = 1
index_j = 2
[]
[stress_zz]
type = RankTwoAux
rank_two_tensor = stress
variable = stress_zz
index_i = 2
index_j = 2
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 0.5
density0 = 1
thermal_expansion = 0
viscosity = 1
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[elasticity_tensor]
type = ComputeElasticityTensor
C_ijkl = '1 1.5'
# bulk modulus is lambda + 2*mu/3 = 1 + 2*1.5/3 = 2
fill_method = symmetric_isotropic
[]
[strain]
type = ComputeSmallStrain
[]
[stress]
type = ComputeLinearElasticStress
[]
[vol_strain]
type = PorousFlowVolumetricStrain
[]
[eff_fluid_pressure]
type = PorousFlowEffectiveFluidPressure
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = porepressure
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '0.5 0 0 0 0.5 0 0 0 0.5'
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'porepressure disp_x disp_y disp_z'
number_fluid_phases = 1
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1
[]
[]
[Postprocessors]
[p0]
type = PointValue
outputs = 'console csv'
execute_on = 'initial timestep_end'
point = '0 0 0'
variable = porepressure
[]
[zdisp]
type = PointValue
outputs = csv
point = '0 0 0.5'
use_displaced_mesh = false
variable = disp_z
[]
[stress_xx]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_xx
[]
[stress_yy]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_yy
[]
[stress_zz]
type = PointValue
outputs = csv
point = '0 0 0'
variable = stress_zz
[]
[fluid_mass]
type = PorousFlowFluidMass
fluid_component = 0
execute_on = 'initial timestep_end'
outputs = 'console csv'
[]
[]
[Preconditioning]
[andy]
type = SMP
full = true
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it'
petsc_options_value = 'bcgs bjacobi 1E-14 1E-8 10000'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
start_time = 0
end_time = 10
dt = 2
[]
[Outputs]
execute_on = 'initial timestep_end'
file_base = mass04
[csv]
type = CSV
[]
[]
(modules/porous_flow/test/tests/dirackernels/bh_except08.i)
# PorousFlowPeacemanBorehole exception test
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = TimeDerivative
variable = pp
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[borehole_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e9
viscosity = 1e-3
density0 = 1000
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-12 0 0 0 1E-12 0 0 0 1E-12'
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
at_nodes = false # Needed to force expected error
[]
[]
[DiracKernels]
[bh]
type = PorousFlowPeacemanBorehole
bottom_p_or_t = 0
fluid_phase = 0
point_file = bh02.bh
use_mobility = true
SumQuantityUO = borehole_total_outflow_mass
variable = pp
unit_weight = '0 0 0'
character = 1
[]
[]
[Postprocessors]
[bh_report]
type = PorousFlowPlotQuantity
uo = borehole_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 bh_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 0.5
dt = 1E-2
solve_type = NEWTON
[]
(modules/porous_flow/test/tests/mass_conservation/mass09.i)
# Checking that the mass postprocessor throws the correct error when more than a single
# phase index is given when using the saturation_threshold parameter
[Mesh]
type = GeneratedMesh
dim = 1
nx = 10
xmin = 0
xmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
[]
[sat]
[]
[]
[AuxVariables]
[massfrac_ph0_sp0]
initial_condition = 1
[]
[massfrac_ph1_sp0]
initial_condition = 0
[]
[]
[ICs]
[pinit]
type = ConstantIC
value = 1
variable = pp
[]
[satinit]
type = FunctionIC
function = 1-x
variable = sat
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[mass1]
type = PorousFlowMassTimeDerivative
fluid_component = 1
variable = sat
[]
[]
[UserObjects]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp sat'
number_fluid_phases = 2
number_fluid_components = 2
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1
[]
[]
[FluidProperties]
[simple_fluid0]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 1
thermal_expansion = 0
[]
[simple_fluid1]
type = SimpleFluidProperties
bulk_modulus = 1
density0 = 0.1
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow2PhasePS
phase0_porepressure = pp
phase1_saturation = sat
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
mass_fraction_vars = 'massfrac_ph0_sp0 massfrac_ph1_sp0'
[]
[simple_fluid0]
type = PorousFlowSingleComponentFluid
fp = simple_fluid0
phase = 0
[]
[simple_fluid1]
type = PorousFlowSingleComponentFluid
fp = simple_fluid1
phase = 1
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[]
[Postprocessors]
[comp1_total_mass]
type = PorousFlowFluidMass
fluid_component = 1
saturation_threshold = 0.5
phase = '0 1'
[]
[]
[Executioner]
type = Transient
solve_type = Newton
dt = 1
end_time = 1
[]
(modules/porous_flow/test/tests/dirackernels/pls02reporter.i)
# fully-saturated situation with a poly-line sink with use_mobility=true
# The poly-line consists of 2 points, and has a length
# of 0.5. Each point is weighted with a weight of 0.1
# The PorousFlowPolyLineSink has
# p_or_t_vals = 0 1E7
# fluxes = 0 1
# so that for 0<=porepressure<=1E7
# base flux = porepressure * 1E-6 * mobility (measured in kg.m^-1.s^-1),
# and when multiplied by the poly-line length, and
# the weighting of each point, the mass flux is
# flux = porepressure * 0.5*E-8 * mobility (kg.s^-1).
#
# The fluid and matrix properties are:
# porosity = 0.1
# element volume = 8 m^3
# density = dens0 * exp(P / bulk), with bulk = 2E7
# initial porepressure P0 = 1E7
# viscosity = 0.2
# So, fluid mass = 0.8 * density (kg)
#
# The equation to solve is
# d(Mass)/dt = - porepressure * 0.5*E-8 * density / viscosity
#
# PorousFlow discretises time to conserve mass, so to march
# forward in time, we must solve
# Mass(dt) = Mass(0) - P * 0.5E-8 * density / viscosity * dt
# or
# 0.8 * dens0 * exp(P/bulk) = 0.8 * dens0 * exp(P0/bulk) - P * 0.5E-8 * density / viscosity * dt
# For the numbers written above this gives
# P(t=1) = 6.36947 MPa
# which is given precisely by MOOSE
[Mesh]
type = GeneratedMesh
dim = 3
nx = 1
ny = 1
nz = 1
xmin = -1
xmax = 1
ymin = -1
ymax = 1
zmin = -1
zmax = 1
[]
[GlobalParams]
PorousFlowDictator = dictator
[]
[Variables]
[pp]
initial_condition = 1E7
[]
[]
[Kernels]
[mass0]
type = PorousFlowMassTimeDerivative
fluid_component = 0
variable = pp
[]
[]
[UserObjects]
[pls_total_outflow_mass]
type = PorousFlowSumQuantity
[]
[dictator]
type = PorousFlowDictator
porous_flow_vars = 'pp'
number_fluid_phases = 1
number_fluid_components = 1
[]
[pc]
type = PorousFlowCapillaryPressureVG
m = 0.5
alpha = 1e-7
[]
[]
[FluidProperties]
[simple_fluid]
type = SimpleFluidProperties
bulk_modulus = 2e7
viscosity = 0.2
density0 = 1000
thermal_expansion = 0
[]
[]
[Materials]
[temperature]
type = PorousFlowTemperature
[]
[ppss]
type = PorousFlow1PhaseP
porepressure = pp
capillary_pressure = pc
[]
[massfrac]
type = PorousFlowMassFraction
[]
[simple_fluid]
type = PorousFlowSingleComponentFluid
fp = simple_fluid
phase = 0
[]
[porosity]
type = PorousFlowPorosityConst
porosity = 0.1
[]
[permeability]
type = PorousFlowPermeabilityConst
permeability = '1E-12 0 0 0 1E-12 0 0 0 1E-12'
[]
[relperm]
type = PorousFlowRelativePermeabilityCorey
n = 2
phase = 0
[]
[]
[DiracKernels]
[pls]
# This defines a sink that has strength
# f = L(P) * relperm * L_seg
# where
# L(P) is a piecewise-linear function of porepressure
# that is zero at pp=0 and 1 at pp=1E7
# relperm is the relative permeability of the fluid
# L_seg is the line-segment length associated with
# the Dirac points defined in the file pls02.bh
type = PorousFlowPolyLineSink
# Because the Variable for this Sink is pp, and pp is associated
# with the fluid-mass conservation equation, this sink is extracting
# fluid mass (and not heat energy or something else)
variable = pp
# The following specfies that the total fluid mass coming out of
# the porespace via this sink in this timestep should be recorded
# in the pls_total_outflow_mass UserObject
SumQuantityUO = pls_total_outflow_mass
# The following file defines the polyline geometry
# which is just two points in this particular example
weight_reporter='pls02file/w'
x_coord_reporter='pls02file/x'
y_coord_reporter='pls02file/y'
z_coord_reporter='pls02file/z'
# Now define the piecewise-linear function, L
# First, we want L to be a function of porepressure (and not
# temperature or something else). The following means that
# p_or_t_vals should be intepreted by MOOSE as the zeroth-phase
# porepressure
function_of = pressure
fluid_phase = 0
# Second, define the piecewise-linear function, L
# The following means
# flux=0 when pp=0 (and also pp<0)
# flux=1 when pp=1E7 (and also pp>1E7)
# flux=linearly intepolated between pp=0 and pp=1E7
# When flux>0 this means a sink, while flux<0 means a source
p_or_t_vals = '0 1E7'
fluxes = '0 1'
# Finally, in this case we want to always multiply
# L by the fluid mobility (of the zeroth phase) and
# use that in the sink strength instead of the bare L
# computed above
use_mobility = true
[]
[]
[Reporters]
[pls02file]
# contains contents from pls02.bh
type=ConstantReporter
real_vector_names = 'w x y z'
real_vector_values = '0.10 0.10;
0.00 0.00;
0.00 0.00;
-0.25 0.25'
[]
[]
[Postprocessors]
[pls_report]
type = PorousFlowPlotQuantity
uo = pls_total_outflow_mass
[]
[fluid_mass0]
type = PorousFlowFluidMass
execute_on = timestep_begin
[]
[fluid_mass1]
type = PorousFlowFluidMass
execute_on = timestep_end
[]
[zmass_error]
type = FunctionValuePostprocessor
function = mass_bal_fcn
execute_on = timestep_end
indirect_dependencies = 'fluid_mass1 fluid_mass0 pls_report'
[]
[p0]
type = PointValue
variable = pp
point = '0 0 0'
execute_on = timestep_end
[]
[]
[Functions]
[mass_bal_fcn]
type = ParsedFunction
expression = abs((a-c+d)/2/(a+c))
symbol_names = 'a c d'
symbol_values = 'fluid_mass1 fluid_mass0 pls_report'
[]
[]
[Preconditioning]
[usual]
type = SMP
full = true
petsc_options = '-snes_converged_reason'
petsc_options_iname = '-ksp_type -pc_type -snes_atol -snes_rtol -snes_max_it -ksp_max_it'
petsc_options_value = 'bcgs bjacobi 1E-10 1E-10 10000 30'
[]
[]
[Executioner]
type = Transient
end_time = 1
dt = 1
solve_type = NEWTON
[]
[Outputs]
exodus = false
csv = true
execute_on = timestep_end
[]