Installation
Install and build MOOSE
Refer to the MOOSE Getting Started pages to set up MOOSE System Environment and check out MOOSE from its git repository. Magpie expects moose to either be checked out side by side
./projects/moose
./projects/magpie
or the MOOSE_DIR environment variable to point to the MOOSE directory.
Install prerequisite packages
Magpie needs GSL (GNU Scientific Library) and the fast Fourier transform library FFTW3 installed for a feature complete build. The configuration of these external packages is performed using pkg-config. Installation of these dependencies is system specific:
Conda (cross platform)
This is now the default** way to install MOOSE/Magpie dependencies.
conda install pkg-config gsl fftw
macOS (Homebrew)
Prerequisite package installation on Mac is easiest using the Homebrew package manager:
brew install pkg-config fftw gsl
Linux (Ubuntu / Debian)
Use the native package manager of your Linux distribution. On Debian based systems, such as Ubuntu, use apt as follows:
sudo apt install pkg-config libgsl-dev libfftw3-dev
Install Magpie
Magpie is hosted on GitHub and can be cloned directly from there using Git. We recommend creating a directory named projects to put all of your MOOSE related work (such as Magpie) in which leads to the following commands (from your home directory):
mkdir ~/projects
cd ~/projects
git clone https://github.com/idaholab/magpie.git
cd ~/projects/magpie
git checkout master
The "master" branch of Magpie is the "stable" branch that will only be updated after all tests are passing. This protects you from the day-to-day churn in the Magpie repository.
GitLab access
To obtain access an HPC token is required.
Build Magpie
In a fresh Magpie clone the MyTRIM and SPPARKS submodules need to be checked out first.
git submodule update --init
Now you are ready to build and test Magpie
make -j 8
./run_tests -j 8
Replace the 8 with the number of CPU cores available on your system. A success installation should pass all tests and the last lines of output should read.
-------------------------------------------------------------------------------------------------------------
Ran 61 tests in 54.5 seconds.
61 passed, 3 skipped, 0 pending, 0 failed