https://mooseframework.inl.gov
Loading...
Searching...
No Matches
Public Types | Public Member Functions | Static Public Member Functions | Protected Member Functions | Protected Attributes | Private Member Functions | Private Attributes | List of all members
HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD Class Reference

Kernel class for Form II of the horizon-stabilized peridynamic correspondence model for finite strain. More...

#include <HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD.h>

Inheritance diagram for HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD:
[legend]

Public Types

typedef DerivativeMaterialPropertyNameInterface::SymbolName SymbolName
 

Public Member Functions

 HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD (const InputParameters &parameters)
 
virtual void computeOffDiagJacobian (unsigned int jvar) override
 
virtual void initialSetup () override
 
virtual void prepare () override
 
const GenericMaterialProperty< U, is_ad > & getDefaultMaterialProperty (const std::string &name)
 
const GenericMaterialProperty< U, is_ad > & getDefaultMaterialPropertyByName (const std::string &name)
 
void validateDerivativeMaterialPropertyBase (const std::string &base)
 
const MaterialPropertyName derivativePropertyName (const MaterialPropertyName &base, const std::vector< SymbolName > &c) const
 
const MaterialPropertyName derivativePropertyNameFirst (const MaterialPropertyName &base, const SymbolName &c1) const
 
const MaterialPropertyName derivativePropertyNameSecond (const MaterialPropertyName &base, const SymbolName &c1, const SymbolName &c2) const
 
const MaterialPropertyName derivativePropertyNameThird (const MaterialPropertyName &base, const SymbolName &c1, const SymbolName &c2, const SymbolName &c3) const
 
GenericMaterialProperty< U, is_ad > & declarePropertyDerivative (const std::string &base, const std::vector< VariableName > &c)
 
GenericMaterialProperty< U, is_ad > & declarePropertyDerivative (const std::string &base, const std::vector< SymbolName > &c)
 
GenericMaterialProperty< U, is_ad > & declarePropertyDerivative (const std::string &base, const SymbolName &c1, const SymbolName &c2="", const SymbolName &c3="")
 
GenericMaterialProperty< U, is_ad > & declarePropertyDerivative (const std::string &base, const std::vector< VariableName > &c)
 
GenericMaterialProperty< U, is_ad > & declarePropertyDerivative (const std::string &base, const std::vector< SymbolName > &c)
 
GenericMaterialProperty< U, is_ad > & declarePropertyDerivative (const std::string &base, const SymbolName &c1, const SymbolName &c2="", const SymbolName &c3="")
 
const GenericMaterialProperty< U, is_ad > & getMaterialPropertyDerivative (const std::string &base, const std::vector< VariableName > &c)
 
const GenericMaterialProperty< U, is_ad > & getMaterialPropertyDerivative (const std::string &base, const std::vector< SymbolName > &c)
 
const GenericMaterialProperty< U, is_ad > & getMaterialPropertyDerivative (const std::string &base, const SymbolName &c1, const SymbolName &c2="", const SymbolName &c3="")
 
const GenericMaterialProperty< U, is_ad > & getMaterialPropertyDerivative (const std::string &base, const SymbolName &c1, unsigned int v2, unsigned int v3=libMesh::invalid_uint)
 
const GenericMaterialProperty< U, is_ad > & getMaterialPropertyDerivative (const std::string &base, unsigned int v1, unsigned int v2=libMesh::invalid_uint, unsigned int v3=libMesh::invalid_uint)
 
const GenericMaterialProperty< U, is_ad > & getMaterialPropertyDerivative (const std::string &base, const std::vector< VariableName > &c)
 
const GenericMaterialProperty< U, is_ad > & getMaterialPropertyDerivative (const std::string &base, const std::vector< SymbolName > &c)
 
const GenericMaterialProperty< U, is_ad > & getMaterialPropertyDerivative (const std::string &base, const SymbolName &c1, const SymbolName &c2="", const SymbolName &c3="")
 
const GenericMaterialProperty< U, is_ad > & getMaterialPropertyDerivative (const std::string &base, const SymbolName &c1, unsigned int v2, unsigned int v3=libMesh::invalid_uint)
 
const GenericMaterialProperty< U, is_ad > & getMaterialPropertyDerivative (const std::string &base, unsigned int v1, unsigned int v2=libMesh::invalid_uint, unsigned int v3=libMesh::invalid_uint)
 
const GenericMaterialProperty< U, is_ad > & getMaterialPropertyDerivativeByName (const MaterialPropertyName &base, const std::vector< VariableName > &c)
 
const GenericMaterialProperty< U, is_ad > & getMaterialPropertyDerivativeByName (const MaterialPropertyName &base, const std::vector< SymbolName > &c)
 
const GenericMaterialProperty< U, is_ad > & getMaterialPropertyDerivativeByName (const MaterialPropertyName &base, const SymbolName &c1, const SymbolName &c2="", const SymbolName &c3="")
 
const GenericMaterialProperty< U, is_ad > & getMaterialPropertyDerivativeByName (const MaterialPropertyName &base, const std::vector< VariableName > &c)
 
const GenericMaterialProperty< U, is_ad > & getMaterialPropertyDerivativeByName (const MaterialPropertyName &base, const std::vector< SymbolName > &c)
 
const GenericMaterialProperty< U, is_ad > & getMaterialPropertyDerivativeByName (const MaterialPropertyName &base, const SymbolName &c1, const SymbolName &c2="", const SymbolName &c3="")
 
void validateCoupling (const MaterialPropertyName &base, const std::vector< VariableName > &c, bool validate_aux=true)
 
void validateCoupling (const MaterialPropertyName &base, const VariableName &c1="", const VariableName &c2="", const VariableName &c3="")
 
void validateCoupling (const MaterialPropertyName &base, const std::vector< VariableName > &c, bool validate_aux=true)
 
void validateCoupling (const MaterialPropertyName &base, const VariableName &c1="", const VariableName &c2="", const VariableName &c3="")
 
void validateNonlinearCoupling (const MaterialPropertyName &base, const VariableName &c1="", const VariableName &c2="", const VariableName &c3="")
 
void validateNonlinearCoupling (const MaterialPropertyName &base, const VariableName &c1="", const VariableName &c2="", const VariableName &c3="")
 
const MaterialPropertyName propertyName (const MaterialPropertyName &base, const std::vector< SymbolName > &c) const
 
const MaterialPropertyName propertyName (const MaterialPropertyName &base, const std::vector< SymbolName > &c) const
 
const MaterialPropertyName propertyNameFirst (const MaterialPropertyName &base, const SymbolName &c1) const
 
const MaterialPropertyName propertyNameFirst (const MaterialPropertyName &base, const SymbolName &c1) const
 
const MaterialPropertyName propertyNameSecond (const MaterialPropertyName &base, const SymbolName &c1, const SymbolName &c2) const
 
const MaterialPropertyName propertyNameSecond (const MaterialPropertyName &base, const SymbolName &c1, const SymbolName &c2) const
 
const MaterialPropertyName propertyNameThird (const MaterialPropertyName &base, const SymbolName &c1, const SymbolName &c2, const SymbolName &c3) const
 
const MaterialPropertyName propertyNameThird (const MaterialPropertyName &base, const SymbolName &c1, const SymbolName &c2, const SymbolName &c3) const
 

Static Public Member Functions

static InputParameters validParams ()
 

Protected Member Functions

virtual void computeLocalResidual () override
 
virtual void computeNonlocalResidual () override
 
virtual void computeLocalJacobian () override
 
virtual void computeNonlocalJacobian () override
 
virtual void computeLocalOffDiagJacobian (unsigned int jvar_num, unsigned int coupled_component) override
 Function to compute local contribution to the off-diagonal Jacobian at the current nodes.
 
virtual void computePDNonlocalOffDiagJacobian (unsigned int jvar_num, unsigned int coupled_component) override
 Function to compute nonlocal contribution to the off-diagonal Jacobian at the current nodes.
 
virtual RankTwoTensor computeDSDU (unsigned int component, unsigned int nd) override
 Function to compute derivative of stress with respect to displacements for small strain problems.
 
RankFourTensor computeDSDFhat (unsigned int nd)
 Function to compute derivative of stress with respect to derived deformation gradient.
 
Real computeDJDU (unsigned int component, unsigned int nd)
 Function to compute derivative of determinant of deformation gradient with respect to displacements.
 
RankTwoTensor computeDinvFTDU (unsigned int component, unsigned int nd)
 Function to compute derivative of deformation gradient inverse with respect to displacements.
 

Protected Attributes

const unsigned int _component
 The index of displacement component.
 
std::vector< MooseVariable * > _disp_var
 displacement variables
 
unsigned int _ndisp
 number of displacement components
 
const std::vector< RealGradient > * _orientation
 Vector of bond in current configuration.
 
std::vector< dof_id_type > _ivardofs
 Current variable dof numbers for nodes i and j.
 
std::vector< Real > _weights
 weights used for the current element to obtain the nodal stress
 
RealGradient _current_vec
 Vector of bond in current configuration.
 
RealGradient _current_unit_vec
 Unit vector of bond in current configuration.
 
const MaterialProperty< RankTwoTensor > & _dgrad_old
 Material point based material property.
 
const MaterialProperty< RankTwoTensor > & _E_inc
 
const MaterialProperty< RankTwoTensor > & _R_inc
 
const MaterialProperty< Real > & _multi
 Material point based material properties.
 
const MaterialProperty< RankTwoTensor > & _stress
 
const MaterialProperty< RankTwoTensor > & _shape2
 
const MaterialProperty< RankTwoTensor > & _dgrad
 
const MaterialProperty< RankTwoTensor > & _ddgraddu
 
const MaterialProperty< RankTwoTensor > & _ddgraddv
 
const MaterialProperty< RankTwoTensor > & _ddgraddw
 
const MaterialProperty< RankFourTensor > & _Jacobian_mult
 
const std::vector< MaterialPropertyName > _eigenstrain_names
 
std::vector< const MaterialProperty< RankTwoTensor > * > _deigenstrain_dT
 
const bool _temp_coupled
 Temperature variable.
 
MooseVariable_temp_var
 
const bool _out_of_plane_strain_coupled
 Parameters for out-of-plane strain in weak plane stress formulation.
 
MooseVariable_out_of_plane_strain_var
 

Private Member Functions

bool haveMaterialProperty (const std::string &prop_name)
 
std::vector< VariableName > buildVariableVector (const VariableName &c1, const VariableName &c2, const VariableName &c3)
 
void validateCouplingHelper (const MaterialPropertyName &base, const std::vector< VariableName > &c, const System &system, std::vector< VariableName > &missing)
 
bool isNotObjectVariable (const VariableName &name)
 

Private Attributes

FEProblemBase_dmi_fe_problem
 

Detailed Description

Kernel class for Form II of the horizon-stabilized peridynamic correspondence model for finite strain.

Definition at line 20 of file HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD.h.

Constructor & Destructor Documentation

◆ HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD()

HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD::HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD ( const InputParameters parameters)

Definition at line 30 of file HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD.C.

32 : MechanicsFiniteStrainBaseNOSPD(parameters), _component(getParam<unsigned int>("component"))
33{
34}
Base kernel class for finite strain correspondence models.

Member Function Documentation

◆ computeDinvFTDU()

RankTwoTensor MechanicsFiniteStrainBaseNOSPD::computeDinvFTDU ( unsigned int  component,
unsigned int  nd 
)
protectedinherited

Function to compute derivative of deformation gradient inverse with respect to displacements.

Parameters
componentThe index of displacement component
ndThe local index of element node (either 1 or 2 for Edge2 element)
Returns
The calculated derivative

Definition at line 134 of file MechanicsFiniteStrainBaseNOSPD.C.

135{
136 // for finite formulation, compute the derivative of transpose of inverse of deformation gradient
137 // w.r.t the solution components
138 // d(inv(F)_ji)/du = d(inv(F)_ji)/dF_kl * dF_kl/du = - inv(F)_jk * inv(F)_li * dF_kl/du
139 // the bases are gi, gj, gk, gl, indictates the inverse transpose rather than the inverse
140
141 RankTwoTensor dinvFTdU;
142 dinvFTdU.zero();
143 RankTwoTensor invF = _dgrad[nd].inverse();
144 if (component == 0)
145 {
146 dinvFTdU(0, 1) =
147 _ddgraddu[nd](0, 2) * _dgrad[nd](2, 1) - _ddgraddu[nd](0, 1) * _dgrad[nd](2, 2);
148 dinvFTdU(0, 2) =
149 _ddgraddu[nd](0, 1) * _dgrad[nd](1, 2) - _ddgraddu[nd](0, 2) * _dgrad[nd](1, 1);
150 dinvFTdU(1, 1) =
151 _ddgraddu[nd](0, 0) * _dgrad[nd](2, 2) - _ddgraddu[nd](0, 2) * _dgrad[nd](2, 0);
152 dinvFTdU(1, 2) =
153 _ddgraddu[nd](0, 2) * _dgrad[nd](1, 0) - _ddgraddu[nd](0, 0) * _dgrad[nd](1, 2);
154 dinvFTdU(2, 1) =
155 _ddgraddu[nd](0, 1) * _dgrad[nd](2, 0) - _ddgraddu[nd](0, 0) * _dgrad[nd](2, 1);
156 dinvFTdU(2, 2) =
157 _ddgraddu[nd](0, 0) * _dgrad[nd](1, 1) - _ddgraddu[nd](0, 1) * _dgrad[nd](1, 0);
158 }
159 else if (component == 1)
160 {
161 dinvFTdU(0, 0) =
162 _ddgraddv[nd](1, 1) * _dgrad[nd](2, 2) - _ddgraddv[nd](1, 2) * _dgrad[nd](2, 1);
163 dinvFTdU(0, 2) =
164 _ddgraddv[nd](1, 2) * _dgrad[nd](0, 1) - _ddgraddv[nd](0, 2) * _dgrad[nd](1, 1);
165 dinvFTdU(1, 0) =
166 _ddgraddv[nd](1, 2) * _dgrad[nd](2, 0) - _ddgraddv[nd](1, 0) * _dgrad[nd](2, 2);
167 dinvFTdU(1, 2) =
168 _ddgraddv[nd](1, 0) * _dgrad[nd](0, 2) - _ddgraddv[nd](1, 2) * _dgrad[nd](0, 0);
169 dinvFTdU(2, 0) =
170 _ddgraddv[nd](1, 0) * _dgrad[nd](2, 1) - _ddgraddv[nd](1, 1) * _dgrad[nd](2, 0);
171 dinvFTdU(2, 2) =
172 _ddgraddv[nd](1, 1) * _dgrad[nd](0, 0) - _ddgraddv[nd](1, 0) * _dgrad[nd](0, 1);
173 }
174 else if (component == 2)
175 {
176 dinvFTdU(0, 0) =
177 _ddgraddw[nd](2, 2) * _dgrad[nd](1, 1) - _ddgraddw[nd](2, 1) * _dgrad[nd](1, 2);
178 dinvFTdU(0, 1) =
179 _ddgraddw[nd](2, 1) * _dgrad[nd](0, 2) - _ddgraddw[nd](2, 2) * _dgrad[nd](0, 1);
180 dinvFTdU(1, 0) =
181 _ddgraddw[nd](2, 0) * _dgrad[nd](1, 2) - _ddgraddw[nd](2, 2) * _dgrad[nd](1, 0);
182 dinvFTdU(1, 1) =
183 _ddgraddw[nd](2, 2) * _dgrad[nd](0, 0) - _ddgraddw[nd](2, 0) * _dgrad[nd](0, 2);
184 dinvFTdU(2, 0) =
185 _ddgraddw[nd](2, 1) * _dgrad[nd](1, 0) - _ddgraddw[nd](2, 0) * _dgrad[nd](1, 1);
186 dinvFTdU(2, 1) =
187 _ddgraddw[nd](2, 0) * _dgrad[nd](0, 1) - _ddgraddw[nd](2, 1) * _dgrad[nd](0, 0);
188 }
189
190 dinvFTdU /= _dgrad[nd].det();
191 for (unsigned int i = 0; i < 3; ++i)
192 for (unsigned int j = 0; j < 3; ++j)
193 for (unsigned int k = 0; k < 3; ++k)
194 for (unsigned int l = 0; l < 3; ++l)
195 {
196 if (component == 0)
197 dinvFTdU(i, j) -= invF(i, j) * invF(l, k) * _ddgraddu[nd](k, l);
198 else if (component == 1)
199 dinvFTdU(i, j) -= invF(i, j) * invF(l, k) * _ddgraddv[nd](k, l);
200 else if (component == 2)
201 dinvFTdU(i, j) -= invF(i, j) * invF(l, k) * _ddgraddw[nd](k, l);
202 }
203
204 return dinvFTdU;
205}
const MaterialProperty< RankTwoTensor > & _ddgraddu
const MaterialProperty< RankTwoTensor > & _ddgraddw
const MaterialProperty< RankTwoTensor > & _dgrad
const MaterialProperty< RankTwoTensor > & _ddgraddv
RankTwoTensorTempl< T > inverse() const

Referenced by HorizonStabilizedFormIFiniteStrainMechanicsNOSPD::computeLocalJacobian(), computeLocalJacobian(), HorizonStabilizedFormIFiniteStrainMechanicsNOSPD::computeLocalOffDiagJacobian(), and computeLocalOffDiagJacobian().

◆ computeDJDU()

Real MechanicsFiniteStrainBaseNOSPD::computeDJDU ( unsigned int  component,
unsigned int  nd 
)
protectedinherited

Function to compute derivative of determinant of deformation gradient with respect to displacements.

Parameters
componentThe index of displacement component
ndThe local index of element node (either 1 or 2 for Edge2 element)
Returns
The calculated derivative

Definition at line 110 of file MechanicsFiniteStrainBaseNOSPD.C.

111{
112 // for finite formulation, compute the derivative of determinant of deformation gradient w.r.t the
113 // solution components
114 // dJ / du = dJ / dF_ij * dF_ij / du = J * inv(F)_ji * dF_ij / du
115
116 Real dJdU = 0.0;
117 RankTwoTensor invF = _dgrad[nd].inverse();
118 Real detF = _dgrad[nd].det();
119 for (unsigned int i = 0; i < 3; ++i)
120 for (unsigned int j = 0; j < 3; ++j)
121 {
122 if (component == 0)
123 dJdU += detF * invF(j, i) * _ddgraddu[nd](i, j);
124 else if (component == 1)
125 dJdU += detF * invF(j, i) * _ddgraddv[nd](i, j);
126 else if (component == 2)
127 dJdU += detF * invF(j, i) * _ddgraddw[nd](i, j);
128 }
129
130 return dJdU;
131}
DIE A HORRIBLE DEATH HERE typedef LIBMESH_DEFAULT_SCALAR_TYPE Real

Referenced by HorizonStabilizedFormIFiniteStrainMechanicsNOSPD::computeLocalJacobian(), computeLocalJacobian(), HorizonStabilizedFormIFiniteStrainMechanicsNOSPD::computeLocalOffDiagJacobian(), and computeLocalOffDiagJacobian().

◆ computeDSDFhat()

RankFourTensor MechanicsFiniteStrainBaseNOSPD::computeDSDFhat ( unsigned int  nd)
protectedinherited

Function to compute derivative of stress with respect to derived deformation gradient.

Parameters
ndThe local index of element node (either 1 or 2 for Edge2 element)
Returns
The calculated derivative

Definition at line 61 of file MechanicsFiniteStrainBaseNOSPD.C.

62{
63 // compute the derivative of stress w.r.t the Fhat for finite strain
65 RankFourTensor dSdFhat;
66 dSdFhat.zero();
67
68 // first calculate the derivative of incremental Cauchy stress w.r.t the inverse of Fhat
69 // Reference: M. M. Rashid (1993), Incremental Kinematics for finite element applications, IJNME
70 RankTwoTensor S_inc = _Jacobian_mult[nd] * _E_inc[nd];
72 Tp1.zero();
73 for (unsigned int i = 0; i < 3; ++i)
74 for (unsigned int j = 0; j < 3; ++j)
75 for (unsigned int k = 0; k < 3; ++k)
76 for (unsigned int l = 0; l < 3; ++l)
77 for (unsigned int m = 0; m < 3; ++m)
78 for (unsigned int n = 0; n < 3; ++n)
79 for (unsigned int r = 0; r < 3; ++r)
80 Tp1(i, j, k, l) +=
81 S_inc(m, n) *
82 (_R_inc[nd](j, n) * (0.5 * I(k, m) * I(i, l) - I(m, l) * _R_inc[nd](i, k) +
83 0.5 * _R_inc[nd](i, k) * _R_inc[nd](m, l)) +
84 _R_inc[nd](i, m) * (0.5 * I(k, n) * I(j, l) - I(n, l) * _R_inc[nd](j, k) +
85 0.5 * _R_inc[nd](j, k) * _R_inc[nd](n, l))) -
86 _R_inc[nd](l, m) * _R_inc[nd](i, n) * _R_inc[nd](j, r) *
87 _Jacobian_mult[nd](n, r, m, k);
88
89 // second calculate derivative of inverse of Fhat w.r.t Fhat
90 // d(inv(Fhat)_kl)/dFhat_mn = - inv(Fhat)_km * inv(Fhat)_nl
91 // the bases are gk, gl, gm, gn, indictates the inverse rather than the inverse transpose
92
94 Tp2.zero();
95 RankTwoTensor invFhat = (_dgrad[nd] * _dgrad_old[nd].inverse()).inverse();
96 for (unsigned int k = 0; k < 3; ++k)
97 for (unsigned int l = 0; l < 3; ++l)
98 for (unsigned int m = 0; m < 3; ++m)
99 for (unsigned int n = 0; n < 3; ++n)
100 Tp2(k, l, m, n) += -invFhat(k, m) * invFhat(n, l);
101
102 // assemble two calculated quantities to form the derivative of Cauchy stress w.r.t
103 // Fhat
104 dSdFhat = Tp1 * Tp2;
105
106 return dSdFhat;
107}
const MaterialProperty< RankFourTensor > & _Jacobian_mult
const MaterialProperty< RankTwoTensor > & _E_inc
const MaterialProperty< RankTwoTensor > & _dgrad_old
Material point based material property.
const MaterialProperty< RankTwoTensor > & _R_inc
void inverse(const std::vector< std::vector< Real > > &m, std::vector< std::vector< Real > > &m_inv)

Referenced by MechanicsFiniteStrainBaseNOSPD::computeDSDU(), HorizonStabilizedFormIFiniteStrainMechanicsNOSPD::computeNonlocalJacobian(), computeNonlocalJacobian(), HorizonStabilizedFormIFiniteStrainMechanicsNOSPD::computePDNonlocalOffDiagJacobian(), and computePDNonlocalOffDiagJacobian().

◆ computeDSDU()

RankTwoTensor MechanicsFiniteStrainBaseNOSPD::computeDSDU ( unsigned int  component,
unsigned int  nd 
)
overrideprotectedvirtualinherited

Function to compute derivative of stress with respect to displacements for small strain problems.

Parameters
componentThe index of displacement component
ndThe local index of element node (either 1 or 2 for Edge2 element)
Returns
The calculated derivative

Reimplemented from MechanicsBaseNOSPD.

Definition at line 36 of file MechanicsFiniteStrainBaseNOSPD.C.

37{
38 // compute the derivative of stress w.r.t the solution components for finite strain
39 RankTwoTensor dSdU;
40
41 // fetch the derivative of stress w.r.t the Fhat
42 RankFourTensor DSDFhat = computeDSDFhat(nd);
43
44 // third calculate derivative of Fhat w.r.t solution components
45 RankTwoTensor Tp3;
46 if (component == 0)
47 Tp3 = _dgrad_old[nd].inverse() * _ddgraddu[nd];
48 else if (component == 1)
49 Tp3 = _dgrad_old[nd].inverse() * _ddgraddv[nd];
50 else if (component == 2)
51 Tp3 = _dgrad_old[nd].inverse() * _ddgraddw[nd];
52
53 // assemble the fetched and calculated quantities to form the derivative of Cauchy stress w.r.t
54 // solution components
55 dSdU = DSDFhat * Tp3;
56
57 return dSdU;
58}
RankFourTensor computeDSDFhat(unsigned int nd)
Function to compute derivative of stress with respect to derived deformation gradient.

Referenced by HorizonStabilizedFormIFiniteStrainMechanicsNOSPD::computeLocalJacobian(), computeLocalJacobian(), HorizonStabilizedFormIFiniteStrainMechanicsNOSPD::computeLocalOffDiagJacobian(), and computeLocalOffDiagJacobian().

◆ computeLocalJacobian()

void HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD::computeLocalJacobian ( )
overrideprotectedvirtual

Definition at line 116 of file HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD.C.

117{
118 for (unsigned int nd = 0; nd < _nnodes; ++nd)
119 {
120 std::vector<dof_id_type> ivardofs(_nnodes);
121 ivardofs[0] = _current_elem->node_ptr(nd)->dof_number(_sys.number(), _var.number(), 0);
122 std::vector<dof_id_type> neighbors = _pdmesh.getNeighbors(_current_elem->node_id(nd));
123 std::vector<dof_id_type> bonds = _pdmesh.getBonds(_current_elem->node_id(nd));
124
125 dof_id_type nb_index =
126 std::find(neighbors.begin(), neighbors.end(), _current_elem->node_id(1 - nd)) -
127 neighbors.begin();
128 std::vector<dof_id_type> dg_neighbors =
129 _pdmesh.getBondDeformationGradientNeighbors(_current_elem->node_id(nd), nb_index);
130
131 RankTwoTensor dPxdUx =
132 computeDJDU(_component, nd) * _stress[nd] * _dgrad[nd].inverse().transpose() +
133 _dgrad[nd].det() * computeDSDU(_component, nd) * _dgrad[nd].inverse().transpose() +
134 _dgrad[nd].det() * _stress[nd] * computeDinvFTDU(_component, nd);
135
136 RealGradient origin_vec_nb;
137 Real node_vol_nb;
138
139 for (unsigned int nb = 0; nb < dg_neighbors.size(); ++nb)
140 if (_bond_status_var->getElementalValue(_pdmesh.elemPtr(bonds[dg_neighbors[nb]])) > 0.5)
141 {
142 ivardofs[1] = _pdmesh.nodePtr(neighbors[dg_neighbors[nb]])
143 ->dof_number(_sys.number(), _var.number(), 0);
144 origin_vec_nb = _pdmesh.getNodeCoord(neighbors[dg_neighbors[nb]]) -
145 _pdmesh.getNodeCoord(_current_elem->node_id(nd));
146 node_vol_nb = _pdmesh.getNodeVolume(neighbors[dg_neighbors[nb]]);
147
148 for (unsigned int i = 0; i < _nnodes; ++i)
149 for (unsigned int j = 0; j < _nnodes; ++j)
150 _local_ke(i, j) = (i == 0 ? -1 : 1) * (j == 0 ? 1 : 0) * _multi[nd] *
151 _horizon_radius[nd] / origin_vec_nb.norm() *
152 (dPxdUx * _shape2[nd].inverse()).row(_component) * origin_vec_nb *
153 node_vol_nb * _bond_status;
154
155 addJacobian(_assembly, _local_ke, ivardofs, ivardofs, _var.scalingFactor());
156 }
157 }
158 _local_ke.zero();
159}
const MaterialProperty< RankTwoTensor > & _shape2
const MaterialProperty< RankTwoTensor > & _stress
const MaterialProperty< Real > & _multi
Material point based material properties.
Real computeDJDU(unsigned int component, unsigned int nd)
Function to compute derivative of determinant of deformation gradient with respect to displacements.
RankTwoTensor computeDinvFTDU(unsigned int component, unsigned int nd)
Function to compute derivative of deformation gradient inverse with respect to displacements.
virtual RankTwoTensor computeDSDU(unsigned int component, unsigned int nd) override
Function to compute derivative of stress with respect to displacements for small strain problems.
auto norm(const T &a)
uint8_t dof_id_type
RealVectorValue RealGradient

◆ computeLocalOffDiagJacobian()

void HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD::computeLocalOffDiagJacobian ( unsigned int  ,
unsigned int   
)
overrideprotectedvirtual

Function to compute local contribution to the off-diagonal Jacobian at the current nodes.

Parameters
coupled_componentThe coupled variable number

Reimplemented from MechanicsBasePD.

Definition at line 273 of file HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD.C.

275{
276 if (_temp_coupled && jvar_num == _temp_var->number()) // temperature is coupled
277 {
278 std::vector<RankTwoTensor> dSdT(_nnodes);
279 for (unsigned int nd = 0; nd < _nnodes; ++nd)
280 for (unsigned int es = 0; es < _deigenstrain_dT.size(); ++es)
281 dSdT[nd] = -_dgrad[nd].det() * _Jacobian_mult[nd] * (*_deigenstrain_dT[es])[nd] *
282 _dgrad[nd].inverse().transpose();
283
284 for (unsigned int nd = 0; nd < _nnodes; ++nd)
285 {
286 std::vector<dof_id_type> ivardofs(_nnodes), jvardofs(_nnodes);
287 ivardofs[0] = _current_elem->node_ptr(nd)->dof_number(_sys.number(), _var.number(), 0);
288 jvardofs[0] = _current_elem->node_ptr(nd)->dof_number(_sys.number(), jvar_num, 0);
289 std::vector<dof_id_type> neighbors = _pdmesh.getNeighbors(_current_elem->node_id(nd));
290 std::vector<dof_id_type> bonds = _pdmesh.getBonds(_current_elem->node_id(nd));
291
292 dof_id_type nb_index =
293 std::find(neighbors.begin(), neighbors.end(), _current_elem->node_id(1 - nd)) -
294 neighbors.begin();
295 std::vector<dof_id_type> dg_neighbors =
296 _pdmesh.getBondDeformationGradientNeighbors(_current_elem->node_id(nd), nb_index);
297
298 RealGradient origin_vec_nb;
299 Real node_vol_nb;
300
301 for (unsigned int nb = 0; nb < dg_neighbors.size(); ++nb)
302 if (_bond_status_var->getElementalValue(_pdmesh.elemPtr(bonds[dg_neighbors[nb]])) > 0.5)
303 {
304 ivardofs[1] = _pdmesh.nodePtr(neighbors[dg_neighbors[nb]])
305 ->dof_number(_sys.number(), _var.number(), 0);
306 jvardofs[1] =
307 _pdmesh.nodePtr(neighbors[dg_neighbors[nb]])->dof_number(_sys.number(), jvar_num, 0);
308 origin_vec_nb = _pdmesh.getNodeCoord(neighbors[dg_neighbors[nb]]) -
309 _pdmesh.getNodeCoord(_current_elem->node_id(nd));
310 node_vol_nb = _pdmesh.getNodeVolume(neighbors[dg_neighbors[nb]]);
311
312 for (unsigned int i = 0; i < _nnodes; ++i)
313 for (unsigned int j = 0; j < _nnodes; ++j)
314 _local_ke(i, j) = (i == 0 ? -1 : 1) * (j == 0 ? 1 : 0) * _multi[nd] *
315 _horizon_radius[nd] / origin_vec_nb.norm() *
316 (dSdT[nd] * _shape2[nd].inverse()).row(_component) * origin_vec_nb *
317 node_vol_nb * _bond_status;
318
319 addJacobian(_assembly, _local_ke, ivardofs, jvardofs, _var.scalingFactor());
320 }
321 }
322 _local_ke.zero();
323 }
325 jvar_num == _out_of_plane_strain_var
326 ->number()) // weak plane stress case, out_of_plane_strain is coupled
327 {
328 std::vector<RankTwoTensor> dSdE33(_nnodes);
329 for (unsigned int nd = 0; nd < _nnodes; ++nd)
330 {
331 for (unsigned int i = 0; i < 3; ++i)
332 for (unsigned int j = 0; j < 3; ++j)
333 dSdE33[nd](i, j) = _Jacobian_mult[nd](i, j, 2, 2);
334
335 dSdE33[nd] = _dgrad[nd].det() * dSdE33[nd] * _dgrad[nd].inverse().transpose();
336 }
337
338 for (unsigned int nd = 0; nd < _nnodes; ++nd)
339 {
340 std::vector<dof_id_type> ivardofs(_nnodes), jvardofs(_nnodes);
341 ivardofs[0] = _current_elem->node_ptr(nd)->dof_number(_sys.number(), _var.number(), 0);
342 jvardofs[0] = _current_elem->node_ptr(nd)->dof_number(_sys.number(), jvar_num, 0);
343 std::vector<dof_id_type> neighbors = _pdmesh.getNeighbors(_current_elem->node_id(nd));
344 std::vector<dof_id_type> bonds = _pdmesh.getBonds(_current_elem->node_id(nd));
345
346 dof_id_type nb_index =
347 std::find(neighbors.begin(), neighbors.end(), _current_elem->node_id(1 - nd)) -
348 neighbors.begin();
349 std::vector<dof_id_type> dg_neighbors =
350 _pdmesh.getBondDeformationGradientNeighbors(_current_elem->node_id(nd), nb_index);
351
352 RealGradient origin_vec_nb;
353 Real node_vol_nb;
354
355 for (unsigned int nb = 0; nb < dg_neighbors.size(); ++nb)
356 if (_bond_status_var->getElementalValue(_pdmesh.elemPtr(bonds[dg_neighbors[nb]])) > 0.5)
357 {
358 ivardofs[1] = _pdmesh.nodePtr(neighbors[dg_neighbors[nb]])
359 ->dof_number(_sys.number(), _var.number(), 0);
360 jvardofs[1] =
361 _pdmesh.nodePtr(neighbors[dg_neighbors[nb]])->dof_number(_sys.number(), jvar_num, 0);
362 origin_vec_nb = _pdmesh.getNodeCoord(neighbors[dg_neighbors[nb]]) -
363 _pdmesh.getNodeCoord(_current_elem->node_id(nd));
364 node_vol_nb = _pdmesh.getNodeVolume(neighbors[dg_neighbors[nb]]);
365
366 for (unsigned int i = 0; i < _nnodes; ++i)
367 for (unsigned int j = 0; j < _nnodes; ++j)
368 _local_ke(i, j) = (i == 0 ? -1 : 1) * (j == 0 ? 1 : 0) * _multi[nd] *
369 _horizon_radius[nd] / origin_vec_nb.norm() *
370 (dSdE33[nd] * _shape2[nd].inverse()).row(_component) *
371 origin_vec_nb * node_vol_nb * _bond_status;
372
373 addJacobian(_assembly, _local_ke, ivardofs, jvardofs, _var.scalingFactor());
374 }
375 }
376 _local_ke.zero();
377 }
378 else // off-diagonal Jacobian with respect to other displacement variables
379 {
380 for (unsigned int nd = 0; nd < _nnodes; ++nd)
381 {
382 std::vector<dof_id_type> ivardofs(_nnodes), jvardofs(_nnodes);
383 ivardofs[0] = _current_elem->node_ptr(nd)->dof_number(_sys.number(), _var.number(), 0);
384 jvardofs[0] = _current_elem->node_ptr(nd)->dof_number(_sys.number(), jvar_num, 0);
385 std::vector<dof_id_type> neighbors = _pdmesh.getNeighbors(_current_elem->node_id(nd));
386 std::vector<dof_id_type> bonds = _pdmesh.getBonds(_current_elem->node_id(nd));
387
388 dof_id_type nb_index =
389 std::find(neighbors.begin(), neighbors.end(), _current_elem->node_id(1 - nd)) -
390 neighbors.begin();
391 std::vector<dof_id_type> dg_neighbors =
392 _pdmesh.getBondDeformationGradientNeighbors(_current_elem->node_id(nd), nb_index);
393
394 RankTwoTensor dPxdUy =
395 computeDJDU(coupled_component, nd) * _stress[nd] * _dgrad[nd].inverse().transpose() +
396 _dgrad[nd].det() * computeDSDU(coupled_component, nd) * _dgrad[nd].inverse().transpose() +
397 _dgrad[nd].det() * _stress[nd] * computeDinvFTDU(coupled_component, nd);
398
399 RealGradient origin_vec_nb;
400 Real node_vol_nb;
401
402 for (unsigned int nb = 0; nb < dg_neighbors.size(); ++nb)
403 if (_bond_status_var->getElementalValue(_pdmesh.elemPtr(bonds[dg_neighbors[nb]])) > 0.5)
404 {
405 ivardofs[1] = _pdmesh.nodePtr(neighbors[dg_neighbors[nb]])
406 ->dof_number(_sys.number(), _var.number(), 0);
407 jvardofs[1] =
408 _pdmesh.nodePtr(neighbors[dg_neighbors[nb]])->dof_number(_sys.number(), jvar_num, 0);
409 origin_vec_nb = _pdmesh.getNodeCoord(neighbors[dg_neighbors[nb]]) -
410 _pdmesh.getNodeCoord(_current_elem->node_id(nd));
411 node_vol_nb = _pdmesh.getNodeVolume(neighbors[dg_neighbors[nb]]);
412
413 for (unsigned int i = 0; i < _nnodes; ++i)
414 for (unsigned int j = 0; j < _nnodes; ++j)
415 _local_ke(i, j) = (i == 0 ? -1 : 1) * (j == 0 ? 1 : 0) * _multi[nd] *
416 _horizon_radius[nd] / origin_vec_nb.norm() *
417 (dPxdUy * _shape2[nd].inverse()).row(_component) * origin_vec_nb *
418 node_vol_nb * _bond_status;
419
420 addJacobian(_assembly, _local_ke, ivardofs, jvardofs, _var.scalingFactor());
421 }
422 }
423 _local_ke.zero();
424 }
425}
std::vector< const MaterialProperty< RankTwoTensor > * > _deigenstrain_dT
const bool _out_of_plane_strain_coupled
Parameters for out-of-plane strain in weak plane stress formulation.
MooseVariable * _temp_var
MooseVariable * _out_of_plane_strain_var
const bool _temp_coupled
Temperature variable.
unsigned int number() const

◆ computeLocalResidual()

void HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD::computeLocalResidual ( )
overrideprotectedvirtual

Definition at line 37 of file HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD.C.

38{
39 // For finite strain formulation, the _stress tensor gotten from material class is the
40 // Cauchy stress (Sigma). the first Piola-Kirchhoff stress (P) is then obtained as
41 // P = J * Sigma * inv(F)^T.
42 // Nodal force states are based on the first Piola-Kirchhoff stress tensors (P).
43 // i.e., T = (J * Sigma * inv(F)^T) * inv(Shape) * xi * multi.
44 // Cauchy stress is calculated as Sigma_n+1 = Sigma_n + R * (C * dt * D) * R^T
45
46 for (unsigned int nd = 0; nd < _nnodes; ++nd)
47 for (unsigned int i = 0; i < _nnodes; ++i)
48 _local_re(i) += (i == 0 ? -1 : 1) * _multi[nd] * _horizon_radius[nd] / _origin_vec.norm() *
49 ((_dgrad[nd].det() * _stress[nd] * _dgrad[nd].inverse().transpose()) *
50 _shape2[nd].inverse())
51 .row(_component) *
52 _origin_vec * _node_vol[1 - nd] * _bond_status;
53}

◆ computeNonlocalJacobian()

void HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD::computeNonlocalJacobian ( )
overrideprotectedvirtual

Definition at line 162 of file HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD.C.

163{
164 // includes dTi/dUj and dTj/dUi contributions
165 for (unsigned int nd = 0; nd < _nnodes; ++nd)
166 {
167 RankFourTensor dSdFhat = computeDSDFhat(nd);
168 RankTwoTensor invF = _dgrad[nd].inverse();
169 Real detF = _dgrad[nd].det();
170 // calculation of jacobian contribution to current_node's neighbors
171 std::vector<dof_id_type> ivardofs(_nnodes), jvardofs(_nnodes);
172 ivardofs[0] = _current_elem->node_ptr(nd)->dof_number(_sys.number(), _var.number(), 0);
173 jvardofs[0] = _current_elem->node_ptr(nd)->dof_number(_sys.number(), _var.number(), 0);
174 std::vector<dof_id_type> neighbors = _pdmesh.getNeighbors(_current_elem->node_id(nd));
175 std::vector<dof_id_type> bonds = _pdmesh.getBonds(_current_elem->node_id(nd));
176
177 dof_id_type nb_index =
178 std::find(neighbors.begin(), neighbors.end(), _current_elem->node_id(1 - nd)) -
179 neighbors.begin();
180 std::vector<dof_id_type> dg_neighbors =
181 _pdmesh.getBondDeformationGradientNeighbors(_current_elem->node_id(nd), nb_index);
182
183 RealGradient origin_vec_nb1;
184 Real node_vol_nb1;
185
186 for (unsigned int nb1 = 0; nb1 < dg_neighbors.size(); ++nb1)
187 if (_bond_status_var->getElementalValue(_pdmesh.elemPtr(bonds[dg_neighbors[nb1]])) > 0.5)
188 {
189 ivardofs[1] = _pdmesh.nodePtr(neighbors[dg_neighbors[nb1]])
190 ->dof_number(_sys.number(), _var.number(), 0);
191 origin_vec_nb1 = _pdmesh.getNodeCoord(neighbors[dg_neighbors[nb1]]) -
192 _pdmesh.getNodeCoord(_current_elem->node_id(nd));
193 node_vol_nb1 = _pdmesh.getNodeVolume(neighbors[dg_neighbors[nb1]]);
194
195 Real vol_nb2, dJdU;
196 RealGradient origin_vec_nb2;
197 RankTwoTensor dFdUk, dPxdUkx, dSdU, dinvFTdU;
198
199 for (unsigned int nb2 = 0; nb2 < dg_neighbors.size(); ++nb2)
200 if (_bond_status_var->getElementalValue(_pdmesh.elemPtr(bonds[dg_neighbors[nb2]])) > 0.5)
201 {
202 ivardofs[1] = _pdmesh.nodePtr(neighbors[dg_neighbors[nb2]])
203 ->dof_number(_sys.number(), _var.number(), 0);
204 vol_nb2 = _pdmesh.getNodeVolume(neighbors[dg_neighbors[nb2]]);
205
206 origin_vec_nb2 = _pdmesh.getNodeCoord(neighbors[dg_neighbors[nb2]]) -
207 _pdmesh.getNodeCoord(_current_elem->node_id(nd));
208
209 dFdUk.zero();
210 for (unsigned int i = 0; i < _dim; ++i)
211 dFdUk(_component, i) =
212 _horizon_radius[nd] / origin_vec_nb2.norm() * origin_vec_nb2(i) * vol_nb2;
213
214 dFdUk *= _shape2[nd].inverse();
215
216 // calculate dJ/du
217 dJdU = 0.0;
218 for (unsigned int i = 0; i < 3; ++i)
219 for (unsigned int j = 0; j < 3; ++j)
220 dJdU += detF * invF(j, i) * dFdUk(i, j);
221
222 // calculate dS/du
223 dSdU = dSdFhat * dFdUk * _dgrad_old[nd].inverse();
224
225 // calculate dinv(F)Tdu
226 dinvFTdU.zero();
227 for (unsigned int i = 0; i < 3; ++i)
228 for (unsigned int J = 0; J < 3; ++J)
229 for (unsigned int k = 0; k < 3; ++k)
230 for (unsigned int L = 0; L < 3; ++L)
231 dinvFTdU(i, J) += -invF(J, k) * invF(L, i) * dFdUk(k, L);
232
233 // calculate the derivative of first Piola-Kirchhoff stress w.r.t displacements
234 dPxdUkx = dJdU * _stress[nd] * invF.transpose() + detF * dSdU * invF.transpose() +
235 detF * _stress[nd] * dinvFTdU;
236
237 for (unsigned int i = 0; i < _nnodes; ++i)
238 for (unsigned int j = 0; j < _nnodes; ++j)
239 _local_ke(i, j) = (i == 0 ? -1 : 1) * (j == 0 ? 0 : 1) * _multi[nd] *
240 _horizon_radius[nd] / origin_vec_nb1.norm() *
241 (dPxdUkx * _shape2[nd].inverse()).row(_component) *
242 origin_vec_nb1 * node_vol_nb1 * _bond_status;
243
244 addJacobian(_assembly, _local_ke, ivardofs, jvardofs, _var.scalingFactor());
245
246 if (_has_diag_save_in)
247 {
248 unsigned int rows = _nnodes;
249 DenseVector<Real> diag(rows);
250 for (unsigned int i = 0; i < rows; ++i)
251 diag(i) = _local_ke(i, i);
252
253 Threads::spin_mutex::scoped_lock lock(Threads::spin_mtx);
254 for (unsigned int i = 0; i < _diag_save_in.size(); ++i)
255 {
256 std::vector<dof_id_type> diag_save_in_dofs(2);
257 diag_save_in_dofs[0] = _current_elem->node_ptr(nd)->dof_number(
258 _diag_save_in[i]->sys().number(), _diag_save_in[i]->number(), 0);
259 diag_save_in_dofs[1] = _pdmesh.nodePtr(neighbors[dg_neighbors[nb2]])
260 ->dof_number(_diag_save_in[i]->sys().number(),
261 _diag_save_in[i]->number(),
262 0);
263
264 _diag_save_in[i]->sys().solution().add_vector(diag, diag_save_in_dofs);
265 }
266 }
267 }
268 }
269 }
270}
RankTwoTensorTempl< T > transpose() const

◆ computeNonlocalResidual()

void HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD::computeNonlocalResidual ( )
overrideprotectedvirtual

Definition at line 56 of file HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD.C.

57{
58 for (unsigned int nd = 0; nd < _nnodes; ++nd)
59 {
60 // calculation of residual contribution to current_node's neighbors
61 std::vector<dof_id_type> ivardofs(_nnodes);
62 ivardofs[0] = _ivardofs[nd];
63 std::vector<dof_id_type> neighbors = _pdmesh.getNeighbors(_current_elem->node_id(nd));
64 std::vector<dof_id_type> bonds = _pdmesh.getBonds(_current_elem->node_id(nd));
65
66 dof_id_type nb_index =
67 std::find(neighbors.begin(), neighbors.end(), _current_elem->node_id(1 - nd)) -
68 neighbors.begin();
69 std::vector<dof_id_type> dg_neighbors =
70 _pdmesh.getBondDeformationGradientNeighbors(_current_elem->node_id(nd), nb_index);
71
72 RealGradient origin_vec_nb;
73 Real node_vol_nb;
74
75 for (unsigned int nb = 0; nb < dg_neighbors.size(); ++nb)
76 if (neighbors[dg_neighbors[nb]] != _current_elem->node_id(1 - nd) &&
77 _bond_status_var->getElementalValue(_pdmesh.elemPtr(bonds[dg_neighbors[nb]])) > 0.5)
78 {
79 ivardofs[1] = _pdmesh.nodePtr(neighbors[dg_neighbors[nb]])
80 ->dof_number(_sys.number(), _var.number(), 0);
81 origin_vec_nb = _pdmesh.getNodeCoord(neighbors[dg_neighbors[nb]]) -
82 _pdmesh.getNodeCoord(_current_elem->node_id(nd));
83 node_vol_nb = _pdmesh.getNodeVolume(neighbors[dg_neighbors[nb]]);
84
85 for (unsigned int i = 0; i < _nnodes; ++i)
86 _local_re(i) = (i == 0 ? -1 : 1) * _multi[nd] * _horizon_radius[nd] /
87 origin_vec_nb.norm() *
88 ((_dgrad[nd].det() * _stress[nd] * _dgrad[nd].inverse().transpose()) *
89 _shape2[nd].inverse())
90 .row(_component) *
91 origin_vec_nb * node_vol_nb * _bond_status;
92
93 // cache the residual contribution
94 addResiduals(_assembly, _local_re, ivardofs, _var.scalingFactor());
95
96 if (_has_save_in)
97 {
98 Threads::spin_mutex::scoped_lock lock(Threads::spin_mtx);
99 for (unsigned int i = 0; i < _save_in.size(); ++i)
100 {
101 std::vector<dof_id_type> save_in_dofs(_nnodes);
102 save_in_dofs[0] = _current_elem->node_ptr(nd)->dof_number(
103 _save_in[i]->sys().number(), _save_in[i]->number(), 0);
104 save_in_dofs[1] =
105 _pdmesh.nodePtr(neighbors[dg_neighbors[nb]])
106 ->dof_number(_save_in[i]->sys().number(), _save_in[i]->number(), 0);
107
108 _save_in[i]->sys().solution().add_vector(_local_re, save_in_dofs);
109 }
110 }
111 }
112 }
113}
std::vector< dof_id_type > _ivardofs
Current variable dof numbers for nodes i and j.

◆ computeOffDiagJacobian()

void MechanicsBasePD::computeOffDiagJacobian ( unsigned int  jvar)
overridevirtualinherited

Definition at line 73 of file MechanicsBasePD.C.

74{
75 prepare();
76
77 if (jvar_num == _var.number())
78 computeJacobian();
79 else
80 {
81 unsigned int coupled_component = 0;
82 bool active = false;
83
84 for (unsigned int i = 0; i < _dim; ++i)
85 if (jvar_num == _disp_var[i]->number())
86 {
87 coupled_component = i;
88 active = true;
89 }
90
91 if (_temp_coupled && jvar_num == _temp_var->number())
92 active = true;
93
95 active = true;
96
97 if (active)
98 {
99 prepareMatrixTag(_assembly, _var.number(), jvar_num);
100 computeLocalOffDiagJacobian(jvar_num, coupled_component);
101 accumulateTaggedLocalMatrix();
102
103 if (_use_full_jacobian)
104 computePDNonlocalOffDiagJacobian(jvar_num, coupled_component);
105 }
106 }
107}
virtual void prepare() override
virtual void computePDNonlocalOffDiagJacobian(unsigned int, unsigned int)
Function to compute nonlocal contribution to the off-diagonal Jacobian at the current nodes.
virtual void computeLocalOffDiagJacobian(unsigned int, unsigned int)
Function to compute local contribution to the off-diagonal Jacobian at the current nodes.
std::vector< MooseVariable * > _disp_var
displacement variables

◆ computePDNonlocalOffDiagJacobian()

void HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD::computePDNonlocalOffDiagJacobian ( unsigned int  ,
unsigned int   
)
overrideprotectedvirtual

Function to compute nonlocal contribution to the off-diagonal Jacobian at the current nodes.

Parameters
jvar_numThe number of the first coupled variable
coupled_componentThe component number of the second coupled variable

Reimplemented from MechanicsBasePD.

Definition at line 428 of file HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD.C.

430{
431 if (_temp_coupled && jvar_num == _temp_var->number())
432 {
433 // no nonlocal contribution from temperature
434 }
436 {
437 // no nonlocal contribution from out of plane strain
438 }
439 else
440 {
441 for (unsigned int nd = 0; nd < _nnodes; ++nd)
442 {
443 RankFourTensor dSdFhat = computeDSDFhat(nd);
444 RankTwoTensor invF = _dgrad[nd].inverse();
445 Real detF = _dgrad[nd].det();
446 // calculation of jacobian contribution to current_node's neighbors
447 // NOT including the contribution to nodes i and j, which is considered as local off-diagonal
448 std::vector<dof_id_type> ivardofs(_nnodes), jvardofs(_nnodes);
449 ivardofs[0] = _current_elem->node_ptr(nd)->dof_number(_sys.number(), _var.number(), 0);
450 jvardofs[0] = _current_elem->node_ptr(nd)->dof_number(_sys.number(), jvar_num, 0);
451 std::vector<dof_id_type> neighbors = _pdmesh.getNeighbors(_current_elem->node_id(nd));
452 std::vector<dof_id_type> bonds = _pdmesh.getBonds(_current_elem->node_id(nd));
453
454 dof_id_type nb_index =
455 std::find(neighbors.begin(), neighbors.end(), _current_elem->node_id(1 - nd)) -
456 neighbors.begin();
457 std::vector<dof_id_type> dg_neighbors =
458 _pdmesh.getBondDeformationGradientNeighbors(_current_elem->node_id(nd), nb_index);
459
460 RealGradient origin_vec_nb1;
461 Real node_vol_nb1;
462
463 for (unsigned int nb1 = 0; nb1 < dg_neighbors.size(); ++nb1)
464 if (_bond_status_var->getElementalValue(_pdmesh.elemPtr(bonds[dg_neighbors[nb1]])) > 0.5)
465 {
466 ivardofs[1] = _pdmesh.nodePtr(neighbors[dg_neighbors[nb1]])
467 ->dof_number(_sys.number(), _var.number(), 0);
468 origin_vec_nb1 = _pdmesh.getNodeCoord(neighbors[dg_neighbors[nb1]]) -
469 _pdmesh.getNodeCoord(_current_elem->node_id(nd));
470 node_vol_nb1 = _pdmesh.getNodeVolume(neighbors[dg_neighbors[nb1]]);
471
472 Real vol_nb2, dJdU;
473 RealGradient origin_vec_nb2;
474 RankTwoTensor dFdUk, dPxdUky, dSdU, dinvFTdU;
475
476 for (unsigned int nb2 = 0; nb2 < dg_neighbors.size(); ++nb2)
477 if (_bond_status_var->getElementalValue(_pdmesh.elemPtr(bonds[dg_neighbors[nb2]])) >
478 0.5)
479 {
480 jvardofs[1] = _pdmesh.nodePtr(neighbors[dg_neighbors[nb2]])
481 ->dof_number(_sys.number(), jvar_num, 0);
482 vol_nb2 = _pdmesh.getNodeVolume(neighbors[dg_neighbors[nb2]]);
483
484 origin_vec_nb2 = _pdmesh.getNodeCoord(neighbors[dg_neighbors[nb2]]) -
485 _pdmesh.getNodeCoord(_current_elem->node_id(nd));
486
487 dFdUk.zero();
488 for (unsigned int i = 0; i < _dim; ++i)
489 dFdUk(coupled_component, i) =
490 _horizon_radius[nd] / origin_vec_nb2.norm() * origin_vec_nb2(i) * vol_nb2;
491
492 dFdUk *= _shape2[nd].inverse();
493
494 // calculate dJ/du
495 dJdU = 0.0;
496 for (unsigned int i = 0; i < 3; ++i)
497 for (unsigned int j = 0; j < 3; ++j)
498 dJdU += detF * invF(j, i) * dFdUk(i, j);
499
500 // calculate dS/du
501 dSdU = dSdFhat * dFdUk * _dgrad_old[nd].inverse();
502
503 // calculate dinv(F)Tdu
504 dinvFTdU.zero();
505 for (unsigned int i = 0; i < 3; ++i)
506 for (unsigned int J = 0; J < 3; ++J)
507 for (unsigned int k = 0; k < 3; ++k)
508 for (unsigned int L = 0; L < 3; ++L)
509 dinvFTdU(i, J) += -invF(J, k) * invF(L, i) * dFdUk(k, L);
510
511 // calculate the derivative of first Piola-Kirchhoff stress w.r.t displacements
512 dPxdUky = dJdU * _stress[nd] * invF.transpose() + detF * dSdU * invF.transpose() +
513 detF * _stress[nd] * dinvFTdU;
514
515 for (unsigned int i = 0; i < _nnodes; ++i)
516 for (unsigned int j = 0; j < _nnodes; ++j)
517 _local_ke(i, j) = (i == 0 ? -1 : 1) * (j == 0 ? 0 : 1) * _multi[nd] *
518 _horizon_radius[nd] / origin_vec_nb1.norm() *
519 (dPxdUky * _shape2[nd].inverse()).row(_component) *
520 origin_vec_nb1 * node_vol_nb1 * _bond_status;
521
522 addJacobian(_assembly, _local_ke, ivardofs, jvardofs, _var.scalingFactor());
523 }
524 }
525 }
526 }
527}

◆ initialSetup()

void MechanicsBasePD::initialSetup ( )
overridevirtualinherited

Definition at line 45 of file MechanicsBasePD.C.

46{
47 _orientation = &_assembly.getFE(FEType(), 1)->get_dxyzdxi();
48}
const std::vector< RealGradient > * _orientation
Vector of bond in current configuration.

◆ prepare()

void MechanicsBasePD::prepare ( )
overridevirtualinherited

Definition at line 51 of file MechanicsBasePD.C.

52{
54
55 _ivardofs.resize(_nnodes);
56 _weights.resize(_nnodes);
57 for (unsigned int nd = 0; nd < _nnodes; ++nd)
58 {
59 _ivardofs[nd] = _current_elem->node_ptr(nd)->dof_number(_sys.number(), _var.number(), 0);
60 _weights[nd] = _pdmesh.getNeighborWeight(
61 _current_elem->node_id(nd),
62 _pdmesh.getNeighborIndex(_current_elem->node_id(nd), _current_elem->node_id(1 - nd)));
63 }
64
65 for (unsigned int i = 0; i < _dim; ++i)
66 _current_vec(i) = _origin_vec(i) + _disp_var[i]->getNodalValue(*_current_elem->node_ptr(1)) -
67 _disp_var[i]->getNodalValue(*_current_elem->node_ptr(0));
68
70}
RealGradient _current_unit_vec
Unit vector of bond in current configuration.
RealGradient _current_vec
Vector of bond in current configuration.
std::vector< Real > _weights
weights used for the current element to obtain the nodal stress
virtual void prepare()
Function to precalculate data which will be used in the derived classes.

Referenced by MechanicsBasePD::computeOffDiagJacobian(), GeneralizedPlaneStrainOffDiagNOSPD::computeOffDiagJacobianScalar(), and GeneralizedPlaneStrainOffDiagOSPD::computeOffDiagJacobianScalar().

◆ validParams()

InputParameters HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD::validParams ( )
static

Definition at line 16 of file HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD.C.

17{
20 "Class for calculating the residual and the Jacobian for Form II "
21 "of the horizon-stabilized peridynamic correspondence model under finite strain assumptions");
22
23 params.addRequiredParam<unsigned int>(
24 "component",
25 "An integer corresponding to the variable this kernel acts on (0 for x, 1 for y, 2 for z)");
26
27 return params;
28}
void addRequiredParam(const std::string &name, const std::string &doc_string)
void addClassDescription(const std::string &doc_string)

Member Data Documentation

◆ _component

const unsigned int HorizonStabilizedFormIIFiniteStrainMechanicsNOSPD::_component
protected

◆ _current_unit_vec

RealGradient MechanicsBasePD::_current_unit_vec
protectedinherited

◆ _current_vec

RealGradient MechanicsBasePD::_current_vec
protectedinherited

◆ _ddgraddu

const MaterialProperty<RankTwoTensor>& MechanicsBaseNOSPD::_ddgraddu
protectedinherited

◆ _ddgraddv

const MaterialProperty<RankTwoTensor>& MechanicsBaseNOSPD::_ddgraddv
protectedinherited

◆ _ddgraddw

const MaterialProperty<RankTwoTensor>& MechanicsBaseNOSPD::_ddgraddw
protectedinherited

◆ _deigenstrain_dT

std::vector<const MaterialProperty<RankTwoTensor> *> MechanicsBaseNOSPD::_deigenstrain_dT
protectedinherited

◆ _dgrad

const MaterialProperty<RankTwoTensor>& MechanicsBaseNOSPD::_dgrad
protectedinherited

◆ _dgrad_old

const MaterialProperty<RankTwoTensor>& MechanicsFiniteStrainBaseNOSPD::_dgrad_old
protectedinherited

◆ _disp_var

std::vector<MooseVariable *> MechanicsBasePD::_disp_var
protectedinherited

◆ _E_inc

const MaterialProperty<RankTwoTensor>& MechanicsFiniteStrainBaseNOSPD::_E_inc
protectedinherited

◆ _eigenstrain_names

const std::vector<MaterialPropertyName> MechanicsBaseNOSPD::_eigenstrain_names
protectedinherited

Definition at line 43 of file MechanicsBaseNOSPD.h.

Referenced by MechanicsBaseNOSPD::MechanicsBaseNOSPD().

◆ _ivardofs

std::vector<dof_id_type> MechanicsBasePD::_ivardofs
protectedinherited

◆ _Jacobian_mult

const MaterialProperty<RankFourTensor>& MechanicsBaseNOSPD::_Jacobian_mult
protectedinherited

◆ _multi

const MaterialProperty<Real>& MechanicsBaseNOSPD::_multi
protectedinherited

Material point based material properties.

Definition at line 35 of file MechanicsBaseNOSPD.h.

Referenced by GeneralizedPlaneStrainOffDiagNOSPD::computeDispFullOffDiagJacobianScalar(), GeneralizedPlaneStrainOffDiagNOSPD::computeDispPartialOffDiagJacobianScalar(), ForceStabilizedSmallStrainMechanicsNOSPD::computeLocalJacobian(), HorizonStabilizedFormIFiniteStrainMechanicsNOSPD::computeLocalJacobian(), computeLocalJacobian(), HorizonStabilizedFormIISmallStrainMechanicsNOSPD::computeLocalJacobian(), HorizonStabilizedFormISmallStrainMechanicsNOSPD::computeLocalJacobian(), ForceStabilizedSmallStrainMechanicsNOSPD::computeLocalOffDiagJacobian(), HorizonStabilizedFormIFiniteStrainMechanicsNOSPD::computeLocalOffDiagJacobian(), computeLocalOffDiagJacobian(), HorizonStabilizedFormISmallStrainMechanicsNOSPD::computeLocalOffDiagJacobian(), HorizonStabilizedFormIISmallStrainMechanicsNOSPD::computeLocalOffDiagJacobian(), ForceStabilizedSmallStrainMechanicsNOSPD::computeLocalResidual(), HorizonStabilizedFormIFiniteStrainMechanicsNOSPD::computeLocalResidual(), computeLocalResidual(), HorizonStabilizedFormIISmallStrainMechanicsNOSPD::computeLocalResidual(), HorizonStabilizedFormISmallStrainMechanicsNOSPD::computeLocalResidual(), ForceStabilizedSmallStrainMechanicsNOSPD::computeNonlocalJacobian(), HorizonStabilizedFormIFiniteStrainMechanicsNOSPD::computeNonlocalJacobian(), computeNonlocalJacobian(), HorizonStabilizedFormIISmallStrainMechanicsNOSPD::computeNonlocalJacobian(), HorizonStabilizedFormISmallStrainMechanicsNOSPD::computeNonlocalJacobian(), computeNonlocalResidual(), HorizonStabilizedFormIISmallStrainMechanicsNOSPD::computeNonlocalResidual(), ForceStabilizedSmallStrainMechanicsNOSPD::computePDNonlocalOffDiagJacobian(), HorizonStabilizedFormIFiniteStrainMechanicsNOSPD::computePDNonlocalOffDiagJacobian(), computePDNonlocalOffDiagJacobian(), HorizonStabilizedFormIISmallStrainMechanicsNOSPD::computePDNonlocalOffDiagJacobian(), and HorizonStabilizedFormISmallStrainMechanicsNOSPD::computePDNonlocalOffDiagJacobian().

◆ _ndisp

unsigned int MechanicsBasePD::_ndisp
protectedinherited

number of displacement components

Definition at line 59 of file MechanicsBasePD.h.

Referenced by MechanicsBasePD::MechanicsBasePD().

◆ _orientation

const std::vector<RealGradient>* MechanicsBasePD::_orientation
protectedinherited

Vector of bond in current configuration.

Definition at line 67 of file MechanicsBasePD.h.

Referenced by MechanicsBasePD::initialSetup().

◆ _out_of_plane_strain_coupled

const bool MechanicsBasePD::_out_of_plane_strain_coupled
protectedinherited

◆ _out_of_plane_strain_var

MooseVariable* MechanicsBasePD::_out_of_plane_strain_var
protectedinherited

◆ _R_inc

const MaterialProperty<RankTwoTensor>& MechanicsFiniteStrainBaseNOSPD::_R_inc
protectedinherited

◆ _shape2

const MaterialProperty<RankTwoTensor>& MechanicsBaseNOSPD::_shape2
protectedinherited

Definition at line 37 of file MechanicsBaseNOSPD.h.

Referenced by GeneralizedPlaneStrainOffDiagNOSPD::computeDispFullOffDiagJacobianScalar(), GeneralizedPlaneStrainOffDiagNOSPD::computeDispPartialOffDiagJacobianScalar(), ForceStabilizedSmallStrainMechanicsNOSPD::computeLocalJacobian(), HorizonStabilizedFormIFiniteStrainMechanicsNOSPD::computeLocalJacobian(), computeLocalJacobian(), HorizonStabilizedFormIISmallStrainMechanicsNOSPD::computeLocalJacobian(), HorizonStabilizedFormISmallStrainMechanicsNOSPD::computeLocalJacobian(), ForceStabilizedSmallStrainMechanicsNOSPD::computeLocalOffDiagJacobian(), HorizonStabilizedFormIFiniteStrainMechanicsNOSPD::computeLocalOffDiagJacobian(), computeLocalOffDiagJacobian(), HorizonStabilizedFormISmallStrainMechanicsNOSPD::computeLocalOffDiagJacobian(), HorizonStabilizedFormIISmallStrainMechanicsNOSPD::computeLocalOffDiagJacobian(), ForceStabilizedSmallStrainMechanicsNOSPD::computeLocalResidual(), HorizonStabilizedFormIFiniteStrainMechanicsNOSPD::computeLocalResidual(), computeLocalResidual(), HorizonStabilizedFormIISmallStrainMechanicsNOSPD::computeLocalResidual(), HorizonStabilizedFormISmallStrainMechanicsNOSPD::computeLocalResidual(), ForceStabilizedSmallStrainMechanicsNOSPD::computeNonlocalJacobian(), HorizonStabilizedFormIFiniteStrainMechanicsNOSPD::computeNonlocalJacobian(), computeNonlocalJacobian(), HorizonStabilizedFormIISmallStrainMechanicsNOSPD::computeNonlocalJacobian(), HorizonStabilizedFormISmallStrainMechanicsNOSPD::computeNonlocalJacobian(), computeNonlocalResidual(), HorizonStabilizedFormIISmallStrainMechanicsNOSPD::computeNonlocalResidual(), ForceStabilizedSmallStrainMechanicsNOSPD::computePDNonlocalOffDiagJacobian(), HorizonStabilizedFormIFiniteStrainMechanicsNOSPD::computePDNonlocalOffDiagJacobian(), computePDNonlocalOffDiagJacobian(), HorizonStabilizedFormIISmallStrainMechanicsNOSPD::computePDNonlocalOffDiagJacobian(), HorizonStabilizedFormISmallStrainMechanicsNOSPD::computePDNonlocalOffDiagJacobian(), and WeakPlaneStressNOSPD::computePDNonlocalOffDiagJacobian().

◆ _stress

const MaterialProperty<RankTwoTensor>& MechanicsBaseNOSPD::_stress
protectedinherited

◆ _temp_coupled

const bool MechanicsBasePD::_temp_coupled
protectedinherited

◆ _temp_var

MooseVariable* MechanicsBasePD::_temp_var
protectedinherited

◆ _weights

std::vector<Real> MechanicsBasePD::_weights
protectedinherited

The documentation for this class was generated from the following files: