mesh_assign.C

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#include <libmesh/mesh.h>
#include <libmesh/distributed_mesh.h>
#include <libmesh/mesh_generation.h>
#include <libmesh/mesh_refinement.h>
#include <libmesh/boundary_info.h>
#include <libmesh/elem.h>
#include <libmesh/equation_systems.h>
#include <libmesh/zero_function.h>
#include <libmesh/dirichlet_boundaries.h>
#include <libmesh/dof_map.h>
#include <libmesh/parallel.h>
#include <libmesh/replicated_mesh.h>

#include <timpi/parallel_implementation.h>

#include "test_comm.h"
#include "libmesh_cppunit.h"


using namespace libMesh;

class MeshAssignTest : public CppUnit::TestCase {
public:
  LIBMESH_CPPUNIT_TEST_SUITE( MeshAssignTest );

/* Tests need a 2d mesh and Dirichlet boundary conditions */
#if LIBMESH_DIM > 1
# ifdef LIBMESH_ENABLE_DIRICHLET
  CPPUNIT_TEST( testMeshMoveAssignFromMemory );
  CPPUNIT_TEST( testReplicatedMeshMoveAssignFromMemory );
  CPPUNIT_TEST( testDistributedMeshMoveAssignFromMemory );
  CPPUNIT_TEST( testMeshMoveAssignFromFile );
  CPPUNIT_TEST( testReplicatedMeshMoveAssignFromFile );
  CPPUNIT_TEST( testDistributedMeshMoveAssignFromFile );
  CPPUNIT_TEST( testReplicatedMeshConstructFromReplicated );
  CPPUNIT_TEST( testReplicatedMeshConstructFromDistributed );
  CPPUNIT_TEST( testDistributedMeshConstructFromReplicated );
  CPPUNIT_TEST( testDistributedMeshConstructFromDistributed );
# endif
#endif

  CPPUNIT_TEST_SUITE_END();

protected:

public:
  void setUp()
  {
  }

  void tearDown()
  {
  }

  void testMeshMoveAssign(const std::string & mesh_type,
                          const std::string & mesh_creation_type)
  {
    // Create two mesh ptrs.
    std::shared_ptr<UnstructuredMesh> mesh_one;
    std::shared_ptr<UnstructuredMesh> mesh_two;

       if (mesh_type.compare("Mesh") == 0)
       {
        mesh_one = std::make_shared<Mesh>(*TestCommWorld);
       }
       else if (mesh_type.compare("replicated") == 0)
       {
        mesh_one = std::make_shared<ReplicatedMesh>(*TestCommWorld);
       }
       else if (mesh_type.compare("distributed") == 0)
       {
        mesh_one = std::make_shared<DistributedMesh>(*TestCommWorld);
       }
       else
       {
        libmesh_error_msg("Error: specified mesh_type not understood");
       }

       MeshTools::Generation::build_square(*mesh_one,
                                          2, 2,
                                          0., 1.,
                                          0., 1.,
                                          QUAD9);

       // build_square adds boundary_ids 0,1,2,3 for the bottom, right,
       // top, and left sides, respectively.

       EquationSystems es(*mesh_one);
       System & system = es.add_system<System> ("SimpleSystem");
       system.add_variable("u", FIRST);

       // Now set the Dirichlet bcs: u = 1.0, when boundary id = 0 and 1.
       // The function describing the boundary value
       ConstFunction<Number> one(1.0);

       // The boundary ids of the boundaries where the value is to be set.
       const boundary_id_type all_bdry_ids[4] = {0, 1, 2, 3};
       const std::set<boundary_id_type> bottom_right_bdry_ids(all_bdry_ids, all_bdry_ids + 1);

       // The variables for which we are defining the bc.
       std::vector<unsigned int> variables = {0};
       variables.push_back(0);

       DirichletBoundary dirichlet_bc(bottom_right_bdry_ids, variables, &one);

       system.get_dof_map().add_dirichlet_boundary(dirichlet_bc);

       es.init();

       if (mesh_type.compare("Mesh") == 0)
       {
        mesh_two = std::make_shared<Mesh>(*TestCommWorld);
       }
       else if (mesh_type.compare("replicated") == 0)
       {
        mesh_two = std::make_shared<ReplicatedMesh>(*TestCommWorld);
       }
       else if (mesh_type.compare("distributed") == 0)
       {
        mesh_two = std::make_shared<DistributedMesh>(*TestCommWorld);
       }
       else
       {
        libmesh_error_msg("Error: specified mesh_type not understood");
       }

#ifdef LIBMESH_ENABLE_AMR // We refine or read refined meshes for this test
       if(mesh_creation_type.compare("from_memory") == 0)
       {
          MeshTools::Generation::build_square(*mesh_two,
                                              2, 2,
                                              0., 1.,
                                              0., 1.,
                                              QUAD4);

          // Uniformly refine mesh_two
          std::unique_ptr<MeshRefinement> mesh_refinement(std::make_unique<MeshRefinement>(*mesh_two));

          mesh_refinement->uniformly_refine(1);

          std::unique_ptr<MeshBase> mesh_two_clone =
            mesh_two->clone();

          // Move mesh_two into mesh_one
          system.get_mesh().clear();
          system.get_mesh().assign(std::move(*mesh_two));
          mesh_two->clear();

          // Assert that the moved into mesh has the right number of elements.
          CPPUNIT_ASSERT_EQUAL(system.get_mesh().n_elem(), static_cast<dof_id_type>(20));

          CPPUNIT_ASSERT(system.get_mesh() == *mesh_two_clone);

          // Reinit the dofs and other system related data structures
          // based on its mesh
          system.get_equation_systems().reinit_mesh();

          // Reinit
          system.get_equation_systems().reinit();

          // Write out the mesh xda, this currently fails with DistributedMesh,
          // running on more than 8 processors, when the mesh to be moved in is
          // read from a file.
          system.get_mesh().write("mesh.out.memory.moved.xda");

          system.get_mesh().clear();
        }
        else if (mesh_creation_type.compare("from_file") == 0)
        {
          mesh_two->read("meshes/mesh_assign_test_mesh.xda");

          std::unique_ptr<MeshBase> mesh_two_clone =
            mesh_two->clone();

          system.get_mesh().clear();
          system.get_mesh().assign(std::move(*mesh_two));

          mesh_two->clear();

          // Assert that the moved into mesh has the right number of elements.
          CPPUNIT_ASSERT_EQUAL(system.get_mesh().n_elem(), static_cast<dof_id_type>(42));

          CPPUNIT_ASSERT(system.get_mesh() == *mesh_two_clone);

          system.get_equation_systems().reinit_mesh();
          system.get_equation_systems().reinit();

          system.get_mesh().write("mesh.out.file.moved.xda");

          system.get_mesh().clear();
        }
         else
        {
         libmesh_error_msg("Error: invalid mesh two case type.");
        }
#endif // LIBMESH_ENABLE_AMR
  }

  template <class SrcClass, class DestClass>
  void testCopyConstruct()
  {
    SrcClass src_mesh(*TestCommWorld);

    MeshTools::Generation::build_square(src_mesh, 4, 4);

    DestClass dest_mesh(src_mesh);

    // Check for consistency
    CPPUNIT_ASSERT(TestCommWorld->verify(dest_mesh.n_elem()));
    CPPUNIT_ASSERT(TestCommWorld->verify(dest_mesh.n_nodes()));
    dof_id_type n_dest_elem = dest_mesh.n_local_elem();
    TestCommWorld->sum(n_dest_elem);
    dof_id_type n_dest_nodes = dest_mesh.n_local_nodes();
    TestCommWorld->sum(n_dest_nodes);
    CPPUNIT_ASSERT_EQUAL(n_dest_elem, dest_mesh.n_elem());
    CPPUNIT_ASSERT_EQUAL(n_dest_nodes, dest_mesh.n_nodes());
    CPPUNIT_ASSERT_EQUAL(src_mesh.n_elem(), dest_mesh.n_elem());
    CPPUNIT_ASSERT_EQUAL(src_mesh.n_nodes(), dest_mesh.n_nodes());
  }

  void testMeshMoveAssignFromMemory()
  { LOG_UNIT_TEST; testMeshMoveAssign("Mesh", "from_memory"); }

  void testReplicatedMeshMoveAssignFromMemory()
  { LOG_UNIT_TEST; testMeshMoveAssign("replicated", "from_memory"); }

  void testDistributedMeshMoveAssignFromMemory()
  { LOG_UNIT_TEST; testMeshMoveAssign("distributed", "from_memory"); }

  void testMeshMoveAssignFromFile()
  { LOG_UNIT_TEST; testMeshMoveAssign("Mesh", "from_file"); }

  void testReplicatedMeshMoveAssignFromFile()
  { LOG_UNIT_TEST; testMeshMoveAssign("replicated", "from_file"); }

  void testDistributedMeshMoveAssignFromFile()
  { LOG_UNIT_TEST; testMeshMoveAssign("distributed", "from_file"); }

  void testReplicatedMeshConstructFromReplicated()
  { LOG_UNIT_TEST; testCopyConstruct<ReplicatedMesh, ReplicatedMesh>(); }

  void testReplicatedMeshConstructFromDistributed()
  { LOG_UNIT_TEST; testCopyConstruct<DistributedMesh, ReplicatedMesh>(); }

  void testDistributedMeshConstructFromReplicated()
  { LOG_UNIT_TEST; testCopyConstruct<ReplicatedMesh, DistributedMesh>(); }

  void testDistributedMeshConstructFromDistributed()
  { LOG_UNIT_TEST; testCopyConstruct<DistributedMesh, DistributedMesh>(); }

}; // End definition of class MeshAssignTest

CPPUNIT_TEST_SUITE_REGISTRATION( MeshAssignTest );